mRNA_L-elsbetiae_contig1613.4209.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1613.4209.1
Unique NamemRNA_L-elsbetiae_contig1613.4209.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1613.4209.1 vs. uniprot
Match: A0A6H5JZK6_9PHAE (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZK6_9PHAE)

HSP 1 Score: 577 bits (1487), Expect = 1.510e-201
Identity = 314/422 (74.41%), Postives = 338/422 (80.09%), Query Frame = 3
Query:   21 MRG-PPLPVIVLLLVPSSLAHNLALDAKRGGHVGQHEHL-PGNARSHVPSTNNRGVGRIGRERIANTAATASIAADALRGGEASAXXXXXXXXXXXXXXXXXXXXXXXLQQRARVLGYFGLWYALNVWYNIVNKKVLNALPLPSSIAVLQLGIGSLWVGTQWLVGIRAPPGKLTSAGVGRLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFRQVFRWQVYASLIPVVAGVSIACAKEINFSWLSFLAAMASNLLFACRANFSKALMTRPPFRHGASTSSANLYGLVTLVSFVVFAPWAVLTGWSKWGPAWEVAMEKNGHQGRRLALSIALSGVSHYLNNEVMYLALGSVHPTTLAVGNTMKRVFIVVASLIVFKTPISKLGMVGSAIAVGGVLVYSLARQHYGEVDR 1280
            MRG PPL ++V LL+   L+H +ALDA+RG   GQHE L P  ARS +  ++ R                    A  LRGG+ +                        L+ RARVLGYFGLWYALNVWYNIVNKKVLNALPLPSSIAVLQLGIGSLWVGTQWLV  R PPGKL + G  RLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFR +FRWQVYASL+PVVAGVS+ACAKEINFSW+SFLAAMASNLLFACRANFSKALMTRPPF  GASTSSANLYGLVT+VSFVVFAP+A LTGWSKWGPAWE AME NGHQ + L LS+ LSGVSHYLNNEVMYLALGSVHPTTLAVGNTMKRVFIVVASLIVFKTPIS+LGMVGSAIAVGGVLVYSLARQHYG +D+
Sbjct:    1 MRGAPPLLLVVSLLISPGLSHTVALDARRGRQAGQHELLLPSTARSKLAPSSRR------INNXXXXXXXXXXXAGLLRGGDGA---------EPATQSSLTAEAGSSLKDRARVLGYFGLWYALNVWYNIVNKKVLNALPLPSSIAVLQLGIGSLWVGTQWLVRARTPPGKLAATGAARLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFRHIFRWQVYASLLPVVAGVSLACAKEINFSWVSFLAAMASNLLFACRANFSKALMTRPPFEDGASTSSANLYGLVTIVSFVVFAPFAALTGWSKWGPAWESAME-NGHQAKALVLSVLLSGVSHYLNNEVMYLALGSVHPTTLAVGNTMKRVFIVVASLIVFKTPISRLGMVGSAIAVGGVLVYSLARQHYGVLDQ 406          
BLAST of mRNA_L-elsbetiae_contig1613.4209.1 vs. uniprot
Match: A0A836CFX7_9STRA (Plastidic triose-phosphate/phosphate translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFX7_9STRA)

HSP 1 Score: 355 bits (912), Expect = 5.770e-115
Identity = 191/312 (61.22%), Postives = 237/312 (75.96%), Query Frame = 3
Query:  342 QQRARVLGYFGLWYALNVWYNIVNKKVLNALPLPSSIAVLQLGIGSLWVGTQWLVGIRAPPGKLTSAGVGRLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFRQVFRWQVYASLIPVVAGVSIACAKEINFSWLSFLAAMASNLLFACRANFSKALMTRPPFRHGASTSSANLYGLVTLVSFVVFAPWAVLTGWSKWGPAW-EVAMEKNGHQGR---RLALSIALSGVSHYLNNEVMYLALGSVHPTTLAVGNTMKRVFIVVASLIVFKTPISKLGMVGSAIAVGGVLVYSLARQHY 1265
            +Q+A+V  YF LWYALN+ YNI NK+ LNALPLP ++   QLG G++WVG QWL+ IRA P  L    + R+ PVA FHGGGQ+ATVLSLGAGAVSFTH+VKA EP FSALVAAV F QVF+ QVYA+L+PVV GV++ACAKE+NFSW+SF+AAM+SNL FA RAN+SK LM +   R G +   ANLY L+T+V+FV+  P A+    +  GPAW +   +  G   R   +LA  +ALSG++HYLNNEVMYLALGSVHP TLAVGNT+KRVFI+VASL+VF+ PI+  G  GSA+A+ GV +YS ARQ Y
Sbjct:   87 KQKAKVAFYFALWYALNIAYNIANKRALNALPLPWTVGTAQLGAGAVWVGAQWLLRIRAAP-VLERGALRRVLPVAAFHGGGQVATVLSLGAGAVSFTHIVKAAEPLFSALVAAVAFGQVFKPQVYAALLPVVGGVAVACAKELNFSWVSFVAAMSSNLFFALRANYSKVLMQK---RLGRNVEPANLYALITMVAFVLCLPLALAAEGALVGPAWGQGVKDLAGVVARPRAQLAWLVALSGLTHYLNNEVMYLALGSVHPVTLAVGNTLKRVFIIVASLVVFRNPITPAGAAGSAVAIAGVQLYSWARQRY 394          
BLAST of mRNA_L-elsbetiae_contig1613.4209.1 vs. uniprot
Match: A0A4D9D5R1_9STRA (TPT domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5R1_9STRA)

HSP 1 Score: 343 bits (881), Expect = 3.730e-110
Identity = 177/302 (58.61%), Postives = 228/302 (75.50%), Query Frame = 3
Query:  360 LGYFGLWYALNVWYNIVNKKVLNALPLPSSIAVLQLGIGSLWVGTQWLVGIRAPPGKLTSAGVGRLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFRQVFRWQVYASLIPVVAGVSIACAKEINFSWLSFLAAMASNLLFACRANFSKALMTRPPFRHGASTSSANLYGLVTLVSFVVFAPWAVLTGWSKWGPAWEVAMEKNGHQGRRLALSIALSGVSHYLNNEVMYLALGSVHPTTLAVGNTMKRVFIVVASLIVFKTPISKLGMVGSAIAVGGVLVYSLARQHY 1265
            L YF LW+ALNV+YNIVNK+VLN LPLP ++A  QLGIG+++V   WL+ +RA P ++++ G+  L  +AF+HG GQL TVLSLGA AVSFTH+VKA+EPFFSALVAAV F+QVF+ QVY SL+PVV+GV++ACA +++F WL+FL AMASNL FA RANFSK  + R      +S S AN+YGLVT+++F +  P   L     W P+W VA EK   +G  L   + LSG+ HYLNNEVMYLAL +VHP TLAVGNT KRVFI++ASL+VF+ PI+  G VGS + + GVL+YSL +Q+Y
Sbjct:  105 LSYFALWFALNVYYNIVNKRVLNTLPLPFTVATAQLGIGAVYVSLSWLLRVRASP-RISTTGLKDLLSIAFYHGSGQLFTVLSLGAAAVSFTHIVKALEPFFSALVAAVCFKQVFKPQVYLSLLPVVSGVAVACANDVSFGWLAFLTAMASNLAFALRANFSKGALFRYRKEGKSSMSPANVYGLVTILAFFLLLPLTCLWEGVDWRPSWRVATEKI--EGTTLVHQLLLSGLFHYLNNEVMYLALDNVHPITLAVGNTAKRVFIILASLLVFRNPITLTGAVGSGVGIAGVLIYSLTKQYY 403          
BLAST of mRNA_L-elsbetiae_contig1613.4209.1 vs. uniprot
Match: A0A7S4DBS7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBS7_HETAK)

HSP 1 Score: 325 bits (832), Expect = 1.880e-103
Identity = 174/309 (56.31%), Postives = 224/309 (72.49%), Query Frame = 3
Query:  354 RVLGYFGLWYALNVWYNIVNKKVLNALPLPSSIAVLQLGIGSLWVGTQWLVGIRAPPGKLTSAGVGRLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFRQVFRWQVYASLIPVVAGVSIACAKEINFSWLSFLAAMASNLLFACRANFSKALMTRPPFRHGASTSSANLYGLVTLVSFVVFAPWAVLTGWSKWGPAWEVAMEKNGHQGRRLALSIALSGVSHYLNNEVMYLALGSVHPTTLAVGNTMKRVFIVVASLIVFKTPISKLGMVGSAIAVGGVLVYSLARQHYGEVDR 1280
            +VLGYFGLWY LN+ YNIVNKKVLN   +P ++A +QLGIG L+    W   +RA P +L+   +  + PVAF+H  GQL TV+SL AGAVSF H+VKA+EPFFSALVAAV+ +Q F+ QVYA+L+PVVAGV++AC  E++FSW SF AAM SN  FACRANFSK LM       G + S+ANLY +VTL +F++ AP A+    +     W  A+   G   ++LA +I LSG+ HYLNNEVMYLAL +VHP TLAVGNT KRVFI+VASL+VF+ PI+  G +GSA+ + GVLVY+L ++HY  + R
Sbjct:   55 KVLGYFGLWYVLNIAYNIVNKKVLNKFQVPWTVAAVQLGIGGLYALASWATPLRAAP-QLSVKSMKAIAPVAFYHSSGQLLTVVSLFAGAVSFAHIVKALEPFFSALVAAVFLKQYFKPQVYATLVPVVAGVALACYSEVDFSWASFAAAMGSNAAFACRANFSKHLMGADL---GKNMSAANLYAVVTLGAFLLLAPLALAAEGAALPREWARAVAA-GITEKKLATNILLSGLFHYLNNEVMYLALDNVHPITLAVGNTAKRVFIIVASLVVFRNPITATGAIGSAVGIAGVLVYALTKEHYDRLAR 358          
BLAST of mRNA_L-elsbetiae_contig1613.4209.1 vs. uniprot
Match: A0A7S1FZ62_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FZ62_9STRA)

HSP 1 Score: 312 bits (799), Expect = 4.180e-98
Identity = 163/308 (52.92%), Postives = 216/308 (70.13%), Query Frame = 3
Query:  354 RVLGYFGLWYALNVWYNIVNKKVLNALPLPSSIAVLQLGIGSLWVGTQWLVGIRAPPGKLTSAGVGRLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFRQVFRWQVYASLIPVVAGVSIACAKEINFSWLSFLAAMASNLLFACRANFSKALMTRPPFRHGASTSSANLYGLVTLVSFVVFAPWAVLTGWSKWGPAWEVAMEKNGHQGRRLALSIALSGVSHYLNNEVMYLALGSVHPTTLAVGNTMKRVFIVVASLIVFKTPISKLGMVGSAIAVGGVLVYSLARQHYGEVD 1277
            +V  YF LWY LN+ YNI NKK+LNALPLP ++  LQLG+GS +V   W  G+R  P  LT  G G L  V F+H  GQL +++SLGAGAVSFTH+VKA+EPFFSA V+A++  +  R QVYA+LIPVV GV+ AC  +++F+WL F +AM SNL+FA RA  SKA MT P    G  T+  N++G+VT+ SF++  P A L+ WS +G  +  A+   G    +    I +SG+ HYLNNEVMY+AL SVHP TLAVGNTMKRVFI+VAS+I F T ++   + GSA+ + GVL+YSL +Q+Y ++D
Sbjct:   82 KVTVYFALWYILNILYNIQNKKILNALPLPLAVGTLQLGVGSTFVAMLWATGLRKAP-ILTPNGKGALKKVGFYHSAGQLLSMVSLGAGAVSFTHIVKALEPFFSAAVSALYLGKWMRPQVYAALIPVVGGVATACFSDLSFTWLGFYSAMGSNLMFALRAVMSKAAMTSPI---GEETTPTNVFGVVTIYSFLLALPVAFLSDWSSFGSLFRDAITSTGKSNLQFVKDICVSGLVHYLNNEVMYMALDSVHPVTLAVGNTMKRVFIIVASVIAFNTKLTTQTITGSAVGIAGVLLYSLTKQYYEKLD 385          
BLAST of mRNA_L-elsbetiae_contig1613.4209.1 vs. uniprot
Match: A0A7S4NB18_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NB18_9STRA)

HSP 1 Score: 302 bits (773), Expect = 4.520e-94
Identity = 167/314 (53.18%), Postives = 217/314 (69.11%), Query Frame = 3
Query:  339 LQQRARVLGYFGLWYALNVWYNIVNKKVLNALPLPSSIAVLQLGIGSLWVGTQWLVGIRAPPGKLTSAGVGRLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFRQVFRWQVYASLIPVVAGVSIACAKEINFSWLSFLAAMASNLLFACRANFSKALMTRPPFRHGASTSSANLYGLVTLVSFVVFAPWAVLTGWSKWGPAWEVAM-EKNGHQGRRLALSIALSGVSHYLNNEVMYLALGSVHPTTLAVGNTMKRVFIVVASLIVFKTPISKLGMVGSAIAVGGVLVYSLARQHYGEVD 1277
            L  R ++ GYFGLWYALNV YNI+NKKVLN +P P ++  +Q GIG+L+    W + IR  P +LTS G   +  V F+H  GQL +++SLGAG VSFTH+VKA+EPFFSALV+A+ F    + QVYA+LIPVV GVS AC KE +FSWL+F  AM SN+ FA RA  SK+ MT      G + +S NL+GLVT  +F +  P  +L     +   W  A+ E +     +LA S+ LSG+ HYLNNEVMYLAL +VHP TLAVGNTMKRVFI+VAS+IVF+ P+S    +G+ I + GVLVYSL +QHY +++
Sbjct:   82 LLHRLKIGGYFGLWYALNVIYNIINKKVLNVVPAPLTVGSIQFGIGALYAAILWALSIRPAP-RLTSKGRDSVWSVGFYHSAGQLLSMISLGAGPVSFTHIVKALEPFFSALVSALVFGTWMKPQVYATLIPVVGGVSYACLKERSFSWLAFWTAMGSNVAFALRAVMSKSAMTS---YIGENINSVNLFGLVTWAAFFISIPTFLLGEGISFLELWSKAIGEGSDTTMPQLARSLVLSGLFHYLNNEVMYLALSNVHPVTLAVGNTMKRVFIMVASVIVFRNPVSLQAAIGAGIGISGVLVYSLTKQHYEKLE 391          
BLAST of mRNA_L-elsbetiae_contig1613.4209.1 vs. uniprot
Match: A0A1E7F950_9STRA (TPT-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F950_9STRA)

HSP 1 Score: 294 bits (752), Expect = 6.140e-92
Identity = 159/311 (51.13%), Postives = 215/311 (69.13%), Query Frame = 3
Query:  345 QRARVLGYFGLWYALNVWYNIVNKKVLNALPLPSSIAVLQLGIGSLWVGTQWLVGIRAPPGKLTSAGVGRLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFRQVFRWQVYASLIPVVAGVSIACAKEINFSWLSFLAAMASNLLFACRANFSKALMTRPPFRHGASTSSANLYGLVTLVSFVVFAPWAVLTGWSKWGPAWEVAMEKNGHQGRRLALSIALSGVSHYLNNEVMYLALGSVHPTTLAVGNTMKRVFIVVASLIVFKTPISKLGMVGSAIAVGGVLVYSLARQHYGEVD 1277
            QR  + GYF  WYALNV YNI+NKKVLN LP P  +  +Q GIG+L+    W+   R  P KLT+ G   +  V  +H  GQL+T++SL AG VSF+H+VKA+EPFFSA+V+  +F    + QVYA+LIPVV GV  AC KE+NFSWL+F AAMASNL FA RA  SK+ +       G + ++ N++GLVT+ +F++  P A++   S +   W  AME+   + +    +I +SG+ HYLNNEVMY+ALGSVHP TLAVGNTMKRVFI+VAS++VF+ PIS    +GSA+ + GVL+YSL +Q+Y  ++
Sbjct:    2 QRLEIGGYFAAWYALNVVYNIINKKVLNVLPAPLIVGSIQFGIGALYCALVWIFKFRPFP-KLTAGGTKAVASVGAYHMLGQLSTMISLQAGPVSFSHIVKAVEPFFSAIVSGFYFNSWMKPQVYATLIPVVGGVGYACLKELNFSWLAFGAAMASNLFFALRAVLSKSALQSGKAT-GTNLTAPNMFGLVTVTAFLLSIPVALIREGSGFSALWLAAMEQVESKSQ-FVRAIFISGLFHYLNNEVMYMALGSVHPVTLAVGNTMKRVFILVASVLVFRNPISMQAGIGSAVGISGVLLYSLTKQYYESLE 309          
BLAST of mRNA_L-elsbetiae_contig1613.4209.1 vs. uniprot
Match: A0A6U3NJ43_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3NJ43_9STRA)

HSP 1 Score: 292 bits (747), Expect = 5.560e-90
Identity = 167/323 (51.70%), Postives = 215/323 (66.56%), Query Frame = 3
Query:  339 LQQRARVLGYFGLWYALNVWYNIVNKKVLNALPLPSSIAVLQLGIGSLWVGTQWLVGIRAPPGKLTSAGVGRLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFRQVFRWQVYASLIPVVAGVSIACAKEINFSWLSFLAAMASNLLFACRANFSKALMTRPPFRHGASTSSANLYGLVTLVSFVVFAPWAVL-TGWS---KWGPAWEVAMEKNGHQG------RRLALSIALSGVSHYLNNEVMYLALGSVHPTTLAVGNTMKRVFIVVASLIVFKTPISKLGMVGSAIAVGGVLVYSLARQHYGEVD 1277
            L QR ++ GYF LWYALNV YNI+NKKVLN LP P ++  +Q G+G+L+  T WL  +R PP KLT  G      +  +H  GQL +++SLGAG VSFTH+VKA+EPFFSA V+A+ F +  + QVYASLIPVV GV  AC KE +FSWL+F  AM SNL FA RA  SKA M       G + +S NL+G+VT  +F    P A++  G+S    W  A        G +         L  ++ +SG+ HYLNNEVMYLALG+VHP TLAVGNTMKRVFI+VAS+IVF+ P+S    +GSAI + GVLVYSL +Q+Y +++
Sbjct:   87 LLQRLKIGGYFALWYALNVIYNILNKKVLNILPAPLTVGAIQFGVGALYAMTLWLTKLRTPP-KLTPEGRKISNNIGIYHMSGQLLSMVSLGAGPVSFTHIVKALEPFFSAAVSALVFGKWMKPQVYASLIPVVGGVGYACLKERSFSWLAFWTAMGSNLAFALRAVMSKAAMIG---NVGENITSPNLFGIVTWFAFFQSIPVALIGEGFSFLDLWSKATTAVAASEGVEAVEASDPMELTRALIISGLFHYLNNEVMYLALGNVHPVTLAVGNTMKRVFIMVASIIVFRNPVSVQAGIGSAIGISGVLVYSLTKQYYEKLE 405          
BLAST of mRNA_L-elsbetiae_contig1613.4209.1 vs. uniprot
Match: K0RFX6_THAOC (TPT domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RFX6_THAOC)

HSP 1 Score: 284 bits (726), Expect = 3.380e-87
Identity = 157/314 (50.00%), Postives = 211/314 (67.20%), Query Frame = 3
Query:  339 LQQRARVLGYFGLWYALNVWYNIVNKKVLNALPLPSSIAVLQLGIGSLWVGTQWLVGIRAPPGKLTSAGVGRLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFRQVFRWQVYASLIPVVAGVSIACAKEINFSWLSFLAAMASNLLFACRANFSKALMTRPPFRHGASTSSANLYGLVTLVSFVVFAPWAVLTGWSKWGPAWEVAMEKNGHQGRRLALSIALSGVSHYLNNEVMYLALGSVHPTTLAVGNTMKRVFIVVASLIVFKTPISKLGMVGSAIAVGGVLVYSLARQHYGEVDR 1280
            + QR +V  YF LWY LNV YN++NKK LN +P P ++  LQ G+G+L+    W+  +R  P  LT  G   +  V F+H  GQ  +++SLGAG VSFTH+VKA+EPFFSA+V+AV F +    QVYA+LIPVV GV+ AC KE +FSWL+F  AM SN+ FA RA  SK+ +       G + +S NL+G+VT+ +F    P  +L   + +   W+ A+    +    L   + LSG+ HYLNNEVMYLAL +VHP TLAVGNTMKRVFIVVAS++VFK PIS    +GSA+ +GGVL+YSL +Q+Y E++R
Sbjct:   65 IAQRLKVGSYFALWYTLNVVYNVLNKKYLNVIPAPLTVGSLQFGVGALYSVLLWVTSLRPAP-VLTDEGNKAVRNVGFYHMTGQELSMMSLGAGPVSFTHIVKALEPFFSAVVSAVVFGKWMAPQVYATLIPVVGGVAYACLKERSFSWLAFYTAMGSNVAFALRAVVSKSALNSSGL--GENLNSVNLFGVVTIWAFFQSIPLFLLVEGNSFVELWKQALSDRTNLD--LIRGLVLSGMFHYLNNEVMYLALSNVHPVTLAVGNTMKRVFIVVASVLVFKNPISIQAAIGSAVGIGGVLLYSLTKQYYEELER 373          
BLAST of mRNA_L-elsbetiae_contig1613.4209.1 vs. uniprot
Match: B7G197_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G197_PHATC)

HSP 1 Score: 282 bits (721), Expect = 5.360e-86
Identity = 155/304 (50.99%), Postives = 208/304 (68.42%), Query Frame = 3
Query:  366 YFGLWYALNVWYNIVNKKVLNALPLPSSIAVLQLGIGSLWVGTQWLVGIRAPPGKLTSAGVGRLTPVAFFHGGGQLATVLSLGAGAVSFTHVVKAMEPFFSALVAAVWFRQVFRWQVYASLIPVVAGVSIACAKEINFSWLSFLAAMASNLLFACRANFSKALMTRPPFRHGASTSSANLYGLVTLVSFVVFAPWAVLTGWSKWGPAWEVAMEKNGHQGRRLALSIALSGVSHYLNNEVMYLALGSVHPTTLAVGNTMKRVFIVVASLIVFKTPISKLGMVGSAIAVGGVLVYSLARQHYGEVD 1277
            YF LWYALN+ YNI+NKK+LN LP P ++  +Q G+G  +V   W + +R  P  LTS G   +  V F+H  GQLA+++SLGAG VSFTH+VKA+EPFFSA+V+A+ F    + QVYA+L+PVV GV  AC KE +FSWL+F  AM SNL FA RA  SK  M+      G + SS N++ +VTL +FV   P A++T    +G  W  A+ +       L  ++ +SG+ HYLNNEVMYLALG+VHP TLAVGNTMKRV I+VAS++VF+  I+    VGSAI + GVL+YSL +Q+Y +++
Sbjct:  112 YFALWYALNIVYNILNKKLLNVLPSPVTVGSIQFGVGCFYVLLVWALKLRPAP-TLTSQGKAAVQKVGFWHCTGQLASMVSLGAGPVSFTHIVKALEPFFSAVVSALAFGTWMKPQVYATLLPVVGGVGYACLKERSFSWLAFYMAMGSNLAFALRAVLSKVAMSSGA-NVGTNISSTNVFAMVTLAAFVWSIPMALVTEGRSFGTLWNKALSQQS--AADLCKALFVSGMFHYLNNEVMYLALGNVHPVTLAVGNTMKRVIIMVASVMVFQNEITPQAAVGSAIGIAGVLLYSLTKQYYEKLE 411          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1613.4209.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZK6_9PHAE1.510e-20174.41TPT domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CFX7_9STRA5.770e-11561.22Plastidic triose-phosphate/phosphate translocator ... [more]
A0A4D9D5R1_9STRA3.730e-11058.61TPT domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S4DBS7_HETAK1.880e-10356.31Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1FZ62_9STRA4.180e-9852.92Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S4NB18_9STRA4.520e-9453.18Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A1E7F950_9STRA6.140e-9251.13TPT-domain-containing protein n=1 Tax=Fragilariops... [more]
A0A6U3NJ43_9STRA5.560e-9051.70Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
K0RFX6_THAOC3.380e-8750.00TPT domain-containing protein n=1 Tax=Thalassiosir... [more]
B7G197_PHATC5.360e-8650.99Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1613contigL-elsbetiae_contig1613:3640..7512 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score593.6
Seed ortholog evalue7.5e-167
Seed eggNOG ortholog2880.D8LKC0
Preferred nameSLC35E3
KEGG koko:K06643,ko:K15283,ko:K15285
KEGG TC2.A.7.9
KEGG Pathwayko01522,ko01524,ko04068,ko04110,ko04115,ko04120,ko04144,ko04151,ko04218,ko04919,ko05165,ko05169,ko05200,ko05202,ko05203,ko05205,ko05206,ko05214,ko05215,ko05218,ko05219,ko05220,map01522,map01524,map04068,map04110,map04115,map04120,map04144,map04151,map04218,map04919,map05165,map05169,map05200,map05202,map05203,map05205,map05206,map05214,map05215,map05218,map05219,map05220
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.carbohydrate transport
EggNOG OGsKOG1441@1,KOG1441@2759
EC2.3.2.27
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko04121,ko04131
Ec32 ortholog descriptionputative phosphate/phosphoenolpyruvate translocator precursor protein
Ec32 orthologEc-01_009700.1
Exons3
Model size1673
Cds size1290
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1613.4209.1prot_L-elsbetiae_contig1613.4209.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1613 3660..7149 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815666.0181596-UTR-L-elsbetiae_contig1613:3639..36591622815666.0181596-UTR-L-elsbetiae_contig1613:3639..3659Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1613 3640..3659 +
1691683024.6841545-UTR-L-elsbetiae_contig1613:3639..36591691683024.6841545-UTR-L-elsbetiae_contig1613:3639..3659Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1613 3640..3659 +
1622815666.0684466-UTR-L-elsbetiae_contig1613:7149..75121622815666.0684466-UTR-L-elsbetiae_contig1613:7149..7512Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1613 7150..7512 +
1691683024.7308657-UTR-L-elsbetiae_contig1613:7149..75121691683024.7308657-UTR-L-elsbetiae_contig1613:7149..7512Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1613 7150..7512 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815666.0314887-CDS-L-elsbetiae_contig1613:3659..44071622815666.0314887-CDS-L-elsbetiae_contig1613:3659..4407Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1613 3660..4407 +
1691683024.6985762-CDS-L-elsbetiae_contig1613:3659..44071691683024.6985762-CDS-L-elsbetiae_contig1613:3659..4407Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1613 3660..4407 +
1622815666.0422444-CDS-L-elsbetiae_contig1613:5650..59611622815666.0422444-CDS-L-elsbetiae_contig1613:5650..5961Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1613 5651..5961 +
1691683024.7111468-CDS-L-elsbetiae_contig1613:5650..59611691683024.7111468-CDS-L-elsbetiae_contig1613:5650..5961Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1613 5651..5961 +
1622815666.0544317-CDS-L-elsbetiae_contig1613:6918..71491622815666.0544317-CDS-L-elsbetiae_contig1613:6918..7149Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1613 6919..7149 +
1691683024.7206016-CDS-L-elsbetiae_contig1613:6918..71491691683024.7206016-CDS-L-elsbetiae_contig1613:6918..7149Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1613 6919..7149 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1613.4209.1

>prot_L-elsbetiae_contig1613.4209.1 ID=prot_L-elsbetiae_contig1613.4209.1|Name=mRNA_L-elsbetiae_contig1613.4209.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=430bp
MRGPPLPVIVLLLVPSSLAHNLALDAKRGGHVGQHEHLPGNARSHVPSTN
NRGVGRIGRERIANTAATASIAADALRGGEASAATTPTATSSSSSSSSSG
GGGGSSLQQRARVLGYFGLWYALNVWYNIVNKKVLNALPLPSSIAVLQLG
IGSLWVGTQWLVGIRAPPGKLTSAGVGRLTPVAFFHGGGQLATVLSLGAG
AVSFTHVVKAMEPFFSALVAAVWFRQVFRWQVYASLIPVVAGVSIACAKE
INFSWLSFLAAMASNLLFACRANFSKALMTRPPFRHGASTSSANLYGLVT
LVSFVVFAPWAVLTGWSKWGPAWEVAMEKNGHQGRRLALSIALSGVSHYL
NNEVMYLALGSVHPTTLAVGNTMKRVFIVVASLIVFKTPISKLGMVGSAI
AVGGVLVYSLARQHYGEVDRNINIAKQQQ*
back to top

mRNA from alignment at L-elsbetiae_contig1613:3640..7512+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1613.4209.1 ID=mRNA_L-elsbetiae_contig1613.4209.1|Name=mRNA_L-elsbetiae_contig1613.4209.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3873bp|location=Sequence derived from alignment at L-elsbetiae_contig1613:3640..7512+ (Laminarionema elsbetiae ELsaHSoW15)
TATTACCACAGCTCAAAATCATGCGTGGGCCACCCCTGCCGGTGATTGTG CTGTTGTTGGTGCCGTCGTCCTTAGCCCACAACTTAGCGTTGGACGCGAA GCGAGGCGGACACGTTGGCCAACATGAGCATTTGCCCGGCAACGCACGAT CACACGTGCCCAGCACCAACAACCGCGGCGTCGGGAGGATCGGGAGGGAA AGGATAGCCAACACCGCCGCTACTGCTTCAATCGCAGCTGATGCCCTGAG AGGAGGAGAAGCATCAGCAGCAACAACACCAACAGCAACAAGCAGCAGCA GCAGTAGCAGCAGCAGCGGCGGCGGCGGCGGCAGCAGCCTCCAGCAACGA GCCCGCGTGCTGGGATATTTCGGCCTGTGGTACGCCCTCAACGTGTGGTA CAACATCGTCAACAAGAAGGTCCTCAACGCCCTGCCGCTTCCCTCCTCCA TAGCTGTCCTGCAGCTCGGCATTGGGAGCCTGTGGGTGGGAACCCAGTGG CTTGTCGGGATCAGGGCCCCCCCCGGAAAGCTCACGAGCGCGGGCGTAGG TCGCCTGACTCCGGTGGCCTTCTTCCACGGGGGCGGCCAGCTGGCGACCG TGCTCAGCCTCGGGGCCGGCGCGGTTAGCTTCACGCACGTGGTGAAGGCG ATGGAGCCCTTCTTTTCGGCGCTGGTTGCGGCGGTCTGGTTCCGGCAGGT GTTCCGGTGGCAGGTGTACGCATCCCTCATCCCTGTCGTGGCGGGCGTGT CGATTGCCTGCGCGAAAGGTGTGAGACAAAAGAGACTTATCTACAAAGCA GCTAGACTAGATAGTGCATTAAAGACGGGTCTCTTTGTTGTATGTATGTA TGTATGTATGCATGTGCAGGAGGGTTGCCATACGTGCTCATGGTAGAGCA GCTGCTAGGGCTCTTTGCGGAAGAGACCACGCTGCTGCTGTGTCCAACAT TTTGATTCAACTCGGGCAGCGCAAAGTTTGCTGCTACAATTTTAGAGGGG ATGAGCCTCCGATAGGTTTCGCAGGCGTTGTGCTCTCTTCTTTGAATGTT AGGCGTGGAGGGCACACCTATTTAGAGTGTCTGGGACGATCGAGCCAGTT GAGCGTATTTGCGTGGGAGACATCCCCGAGTTTCTCCGATAACATAGTCT ACTGCTGATCCGAGGAAGCTCAGGAACGAACGGGCACTTAACTAACTGTG TGTGAATCAGTCAGGATACGACCCTAGCTGGCTCATATGATGACGTCATT CTTACGGGATAATTCAAGATAGCATTTACAACAATGCACCAATTTTATTT CGAACTCGCAGTCCTCGCGGGCTTTGACGCCCACTAAATTTACAAAGCCA CCTTGCGTAACTAAATTCTGAAAAAAATCTGAGATATTTTACGTCGCAGG GCGTTGTTAAGGTCCCAGTTTGGCGTTCGATTATTGTAGTTTGGCGCGTG CACCCGTACTACTCTTGGTCGTTCCTGTACCGATACTGACTGTACGATAC TCTGTTGTAGCGGAACACGTTATGGTCGTTGCCCTTCACCGTGTGTAGGC TTTGGTAAAAGCAACTGCAGTTGAAGCCTCGCGCATATGTACGGTGGACG AAGAAAGAAACCATGGATGTTTTTTCGATCCCGCCCCGCCTTTTGAAACA ACGAAAAAGCGATTCGCTCGCGGGACTGCTGTGCCCTGTTTTGAAACACA GCCGCACACACCAAGCTCGTGAAGTGAACTACCGCTGTTGCTGTACTGAC TGCTGTCACGTCCGGAACCCCGATTAGGTCGGACCGGCGCACGCCTCTGA AATACTCTTATTGTAGGAGGGTGTCCAGTAGACATATTGCGATGCCACCA ATCACTGCTGTTTCTGATTCGTCCCGTCGCCCCCCGTCACACGAGAACAG CAGTATTTGTTAACACCGGCAGCCCCTCCCGCCCCCCTCCCGCCGCCCCC ACCTCCGGTACTCTCGTTTTTCACCCACCGTCCAACCCCCCCCCCCCCCT CCCCACACCAGAAATAAACTTTAGCTGGTTGAGCTTCCTCGCCGCGATGG CGTCCAACCTGCTTTTCGCCTGCCGGGCCAACTTCTCCAAGGCCCTCATG ACGCGCCCCCCCTTCCGGCACGGCGCCTCAACGTCTTCCGCGAACCTCTA CGGGCTCGTGACGCTGGTGTCCTTCGTGGTCTTCGCGCCGTGGGCGGTGC TGACGGGCTGGAGCAAGTGGGGCCCCGCGTGGGAGGTGGCGATGGAGAAG AACGGCCACCAGGGGCGGCGGCTCGCGCTCAGCATCGCGCTCTCGGGGGT CTCGCACTACCTCAACAACGAGGTGTGTAGGTGAAGAGGCCGTTCGTCTC ACCGGAGTACTTTTGTTTTTCGGAGGTGGGGGAGGGGGGTATCTATTTAC CCCGAGATGGATACGGCTGTGCGGAGTGTGTATCTCCTGGATTTTCTCCC CTCGTTTCGGGCACTTCGACCAGAGGCAGGCAGCGCGGCACCTAGATGTC GTCCCTAAAGCACGGAGAAGGGGCAGAGAGATTTGTGGCATATTTAACGA AAAAAGAGTAGTGAACTCTCTCGCCGGGAATTGAACCCGGGTGTACAGGG GGGGAAACGAATGTGTGAGTGCGTGTGTTTTTGTGCATTTTGCGGCGACC CTTGTTTGGGGAATGTCGGACTTCCGGCACTTTTTCGTCGGACAGAGAAT GTTGTGTAGTCGACGGGTGTGATGGAAAGCCTCCAGGCTGGACAAACGGC CGAACGTTTCGCGTGGCGTGAGGTCGCGGCCGATGCGCCATGCAGCAGGA GTAAGTGTGCGAGGTGTTCTGCTGCACAATCGGAGGTTCCCGCCGGCCTC GGTTCGAACGCGCATGTCTCTGACACTCTTGACACGCAAGGGAGTTTAGA GAGTGTTGATGGCGTCATTGCATGCACGATTTTGCAGCAGGAAAGTATAG TACCTGTCAAGGAAGAGCGGCGCCGTGAAGTCGATTTGTTCGTTTGTTTG TGCGTGGTGGTTTTAGGTCCGGCTGATGACCAGAAAGTGGGGAACGTACA GTAGTAGTGAGATCCGACGCGGTCATTTCGCATAAATTTACCCCGTCACC ATTGCGCACAGCAGTACGTAGTGCAGCAACTGAGATCCATGCAGCGATAT TTGGCGTCTGGGAGCCCACCCGCGGCCAGTTATCCTTCATGCACAGGATC GCACACCGTCCGCACCGCAGATTCTCTCGTTCCCACACAAATCCCCTTTT TCTTTCTGTGCTGTTGCAAAACGTTGCAGGTGATGTATCTCGCGCTGGGG TCTGTGCACCCTACCACCCTCGCCGTGGGCAACACCATGAAGCGAGTCTT CATCGTGGTGGCTAGCCTGATAGTATTCAAGACCCCCATTTCCAAGCTGG GTATGGTGGGCTCGGCGATTGCGGTGGGGGGCGTGCTCGTGTACAGCTTG GCAAGACAGCACTACGGCGAAGTGGATCGAAACATTAACATTGCCAAGCA GCAGCAGTGATGGGTAGCATGTAGCAGCGGCAGCAATGGTTGATCCGCGA TACATAGCCACCAGGAGCTGGTAGCAGCAGCAGCAGCAGCAGCAGAAGCA GAAGCAGAAGCAAAAGCAGCAGAATAGAAACAGAACGTACTGTAAATGCC ACCTTGAATGACCAGTTAAAGTGACGTTACCAGATGAGTCAGCCAAGATC GTACATTTTGGTCGGGGTATCACAGATCGAGTCAGCACCCGTTCCTCCGC TTCCTAGGAACGTTCTAGGAAAGCGGAGAATCCTTGTCGCTCGAAGGCAA CTGCTGGCTCTACACCCGAGCTCACTCGATGTATCCTCTACACCAGACCC ACGAGAAGAGAACCACGCCTGCA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1613:3640..7512+

>mRNA_L-elsbetiae_contig1613.4209.1 ID=mRNA_L-elsbetiae_contig1613.4209.1|Name=mRNA_L-elsbetiae_contig1613.4209.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2580bp|location=Sequence derived from alignment at L-elsbetiae_contig1613:3640..7512+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCGTGGGCCACCCCTGCCGGTGATTGTGCTGTTGTTGGTGCCGTCGTC
CTTAGCCCACAACTTAGCGTTGGACGCGAAGCGAGGCGGACACGTTGGCC
AACATGAGCATTTGCCCGGCAACGCACGATCACACGTGCCCAGCACCAAC
AACCGCGGCGTCGGGAGGATCGGGAGGGAAAGGATAGCCAACACCGCCGC
TACTGCTTCAATCGCAGCTGATGCCCTGAGAGGAGGAGAAGCATCAGCAG
CAACAACACCAACAGCAACAAGCAGCAGCAGCAGTAGCAGCAGCAGCGGC
GGCGGCGGCGGCAGCAGCCTCCAGCAACGAGCCCGCGTGCTGGGATATTT
CGGCCTGTGGTACGCCCTCAACGTGTGGTACAACATCGTCAACAAGAAGG
TCCTCAACGCCCTGCCGCTTCCCTCCTCCATAGCTGTCCTGCAGCTCGGC
ATTGGGAGCCTGTGGGTGGGAACCCAGTGGCTTGTCGGGATCAGGGCCCC
CCCCGGAAAGCTCACGAGCGCGGGCGTAGGTCGCCTGACTCCGGTGGCCT
TCTTCCACGGGGGCGGCCAGCTGGCGACCGTGCTCAGCCTCGGGGCCGGC
GCGGTTAGCTTCACGCACGTGGTGAAGGCGATGGAGCCCTTCTTTTCGGC
GCTGGTTGCGGCGGTCTGGTTCCGGCAGGTGTTCCGGTGGCAGGTGTACG
CATCCCTCATCCCTGTCGTGGCGGGCGTGTCGATTGCCTGCGCGAAAGAT
GCGTGGGCCACCCCTGCCGGTGATTGTGCTGTTGTTGGTGCCGTCGTCCT
TAGCCCACAACTTAGCGTTGGACGCGAAGCGAGGCGGACACGTTGGCCAA
CATGAGCATTTGCCCGGCAACGCACGATCACACGTGCCCAGCACCAACAA
CCGCGGCGTCGGGAGGATCGGGAGGGAAAGGATAGCCAACACCGCCGCTA
CTGCTTCAATCGCAGCTGATGCCCTGAGAGGAGGAGAAGCATCAGCAGCA
ACAACACCAACAGCAACAAGCAGCAGCAGCAGTAGCAGCAGCAGCGGCGG
CGGCGGCGGCAGCAGCCTCCAGCAACGAGCCCGCGTGCTGGGATATTTCG
GCCTGTGGTACGCCCTCAACGTGTGGTACAACATCGTCAACAAGAAGGTC
CTCAACGCCCTGCCGCTTCCCTCCTCCATAGCTGTCCTGCAGCTCGGCAT
TGGGAGCCTGTGGGTGGGAACCCAGTGGCTTGTCGGGATCAGGGCCCCCC
CCGGAAAGCTCACGAGCGCGGGCGTAGGTCGCCTGACTCCGGTGGCCTTC
TTCCACGGGGGCGGCCAGCTGGCGACCGTGCTCAGCCTCGGGGCCGGCGC
GGTTAGCTTCACGCACGTGGTGAAGGCGATGGAGCCCTTCTTTTCGGCGC
TGGTTGCGGCGGTCTGGTTCCGGCAGGTGTTCCGGTGGCAGGTGTACGCA
TCCCTCATCCCTGTCGTGGCGGGCGTGTCGATTGCCTGCGCGAAAGAAAT
AAACTTTAGCTGGTTGAGCTTCCTCGCCGCGATGGCGTCCAACCTGCTTT
TCGCCTGCCGGGCCAACTTCTCCAAGGCCCTCATGACGCGCCCCCCCTTC
CGGCACGGCGCCTCAACGTCTTCCGCGAACCTCTACGGGCTCGTGACGCT
GGTGTCCTTCGTGGTCTTCGCGCCGTGGGCGGTGCTGACGGGCTGGAGCA
AGTGGGGCCCCGCGTGGGAGGTGGCGATGGAGAAGAACGGCCACCAGGGG
CGGCGGCTCGCGCTCAGCATCGCGCTCTCGGGGGTCTCGCACTACCTCAA
CAACGAGAAATAAACTTTAGCTGGTTGAGCTTCCTCGCCGCGATGGCGTC
CAACCTGCTTTTCGCCTGCCGGGCCAACTTCTCCAAGGCCCTCATGACGC
GCCCCCCCTTCCGGCACGGCGCCTCAACGTCTTCCGCGAACCTCTACGGG
CTCGTGACGCTGGTGTCCTTCGTGGTCTTCGCGCCGTGGGCGGTGCTGAC
GGGCTGGAGCAAGTGGGGCCCCGCGTGGGAGGTGGCGATGGAGAAGAACG
GCCACCAGGGGCGGCGGCTCGCGCTCAGCATCGCGCTCTCGGGGGTCTCG
CACTACCTCAACAACGAGGTGATGTATCTCGCGCTGGGGTCTGTGCACCC
TACCACCCTCGCCGTGGGCAACACCATGAAGCGAGTCTTCATCGTGGTGG
CTAGCCTGATAGTATTCAAGACCCCCATTTCCAAGCTGGGTATGGTGGGC
TCGGCGATTGCGGTGGGGGGCGTGCTCGTGTACAGCTTGGCAAGACAGCA
CTACGGCGAAGTGGATCGAAACATTAACATTGCCAAGCAGCAGCAGTGAG
TGATGTATCTCGCGCTGGGGTCTGTGCACCCTACCACCCTCGCCGTGGGC
AACACCATGAAGCGAGTCTTCATCGTGGTGGCTAGCCTGATAGTATTCAA
GACCCCCATTTCCAAGCTGGGTATGGTGGGCTCGGCGATTGCGGTGGGGG
GCGTGCTCGTGTACAGCTTGGCAAGACAGCACTACGGCGAAGTGGATCGA
AACATTAACATTGCCAAGCAGCAGCAGTGA
back to top