mRNA_L-elsbetiae_contig16109.4199.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16109.4199.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 4.900e-13 Identity = 36/72 (50.00%), Postives = 47/72 (65.28%), Query Frame = 1 Query: 1 WSDLLDKFQPDDQQYRRELIAELNSISMKEGTDPDTFLAEVQDLANKLEYLGEGVSDARLADIVLQGLPPSY 216 W +L KFQP D+ RR L EL S +M+ GTDPD F+ V LA +L ++G V+D +L DI+LQGLP Y Sbjct: 236 WKELESKFQPADEHRRRNLERELESATMRTGTDPDIFITHVWHLAEQLRFIGGTVTDEKLGDIILQGLPAEY 307
BLAST of mRNA_L-elsbetiae_contig16109.4199.1 vs. uniprot
Match: A0A6H5JLQ5_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLQ5_9PHAE) HSP 1 Score: 72.0 bits (175), Expect = 1.350e-12 Identity = 43/137 (31.39%), Postives = 68/137 (49.64%), Query Frame = 1 Query: 49 RELIAELNSISMKEGTDPDTFLAEVQDLANKLEYLGEGVSDARLADIVLQGLPPSYDQLRLMADMDSGFTFAKIERTARNMYKSHSRGRQQQRHGHQRDTHVRDSGMVAFSSKPHGSTQLTCHSCGEPGHVQRLCPR 459 R + EL + M G +PD + + L +L+ +GE +SD R DI +QG Y ++L+ D F ++ T RN++ +Q R G + R MV +S ++ CHSC EPGH++R CP+ Sbjct: 68 RAKMEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLIVLRDPTFNVLDMQSTMRNIFLD-----EQSRKGWKGRIAGRGFSMVTTAS------EIICHSCYEPGHIRRNCPK 193
BLAST of mRNA_L-elsbetiae_contig16109.4199.1 vs. uniprot
Match: A0A6H5JZ53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ53_9PHAE) HSP 1 Score: 73.9 bits (180), Expect = 2.020e-12 Identity = 43/134 (32.09%), Postives = 66/134 (49.25%), Query Frame = 1 Query: 58 IAELNSISMKEGTDPDTFLAEVQDLANKLEYLGEGVSDARLADIVLQGLPPSYDQLRLMADMDSGFTFAKIERTARNMYKSHSRGRQQQRHGHQRDTHVRDSGMVAFSSKPHGSTQLTCHSCGEPGHVQRLCPR 459 + EL + M G +PD + + L +L+ +GE +SD R DI +QG Y+ ++LM D F ++ T RN+Y +Q R G + R M +S + CHSC EPGH++R CP+ Sbjct: 1 MEELENNPMNPGENPDDYFNQKHPLCVQLDKMGEPISDRRFKDICVQGFSDEYEDVKLMLFRDPTFNVLDMQSTMRNIYLD-----EQSRKGWKGRIAGRGFAMATTAS------DIICHSCYEPGHIRRNCPK 123
BLAST of mRNA_L-elsbetiae_contig16109.4199.1 vs. uniprot
Match: A0A6H5JF66_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF66_9PHAE) HSP 1 Score: 72.0 bits (175), Expect = 7.370e-12 Identity = 43/137 (31.39%), Postives = 66/137 (48.18%), Query Frame = 1 Query: 49 RELIAELNSISMKEGTDPDTFLAEVQDLANKLEYLGEGVSDARLADIVLQGLPPSYDQLRLMADMDSGFTFAKIERTARNMYKSHSRGRQQQRHGHQRDTHVRDSGMVAFSSKPHGSTQLTCHSCGEPGHVQRLCPR 459 R + EL + M G +PD + + L +L+ +GE +SD R DI +QG Y ++LM D F ++ T RN++ +Q R G + R M +S + CHSC EPGH++R CP+ Sbjct: 135 RAKMEELENNPMNPGENPDNYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLD-----EQSRKGWKGRIAGRGFAMATTAS------DIICHSCYEPGHIRRNCPK 260
BLAST of mRNA_L-elsbetiae_contig16109.4199.1 vs. uniprot
Match: A0A6H5L580_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L580_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 6.350e-11 Identity = 43/137 (31.39%), Postives = 65/137 (47.45%), Query Frame = 1 Query: 49 RELIAELNSISMKEGTDPDTFLAEVQDLANKLEYLGEGVSDARLADIVLQGLPPSYDQLRLMADMDSGFTFAKIERTARNMYKSHSRGRQQQRHGHQRDTHVRDSGMVAFSSKPHGSTQLTCHSCGEPGHVQRLCPR 459 R + EL + M G +PD + + L +L+ +GE +SD R DI +QG Y ++LM D F + T RN++ +Q R G + R M +S + CHSC EPGH++R CP+ Sbjct: 153 RAKMEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMLSTMRNIFLD-----EQSRKGWKGRIAGRGFAMATTAS------DIICHSCYEPGHIRRNCPK 278
BLAST of mRNA_L-elsbetiae_contig16109.4199.1 vs. uniprot
Match: A0A6H5KT84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT84_9PHAE) HSP 1 Score: 69.3 bits (168), Expect = 8.640e-11 Identity = 43/137 (31.39%), Postives = 65/137 (47.45%), Query Frame = 1 Query: 49 RELIAELNSISMKEGTDPDTFLAEVQDLANKLEYLGEGVSDARLADIVLQGLPPSYDQLRLMADMDSGFTFAKIERTARNMYKSHSRGRQQQRHGHQRDTHVRDSGMVAFSSKPHGSTQLTCHSCGEPGHVQRLCPR 459 R + EL + M G +PD + + L +L+ +GE +SD R DI +QG Y ++LM D F ++ T RN++ +Q R G + R M +S CHSC EPGH++R CP+ Sbjct: 111 RTKMEELENNPMNLGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLD-----EQSRKGWKGRIAGRGFAMATTAS------DSICHSCYEPGHIRRNCPK 236
BLAST of mRNA_L-elsbetiae_contig16109.4199.1 vs. uniprot
Match: A0A6H5KZM5_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZM5_9PHAE) HSP 1 Score: 68.2 bits (165), Expect = 1.350e-10 Identity = 41/134 (30.60%), Postives = 64/134 (47.76%), Query Frame = 1 Query: 58 IAELNSISMKEGTDPDTFLAEVQDLANKLEYLGEGVSDARLADIVLQGLPPSYDQLRLMADMDSGFTFAKIERTARNMYKSHSRGRQQQRHGHQRDTHVRDSGMVAFSSKPHGSTQLTCHSCGEPGHVQRLCPR 459 + EL + M G +PD + + L +L+ +GE +SD R DI +QG Y ++LM D F ++ T RN++ +Q R + R M +S + CHSC EPGH++R CP+ Sbjct: 1 MEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLD-----EQSRKEWKGRIAGRGFAMATTAS------DIICHSCYEPGHIRRNCPK 123
BLAST of mRNA_L-elsbetiae_contig16109.4199.1 vs. uniprot
Match: A0A6H5JQ58_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ58_9PHAE) HSP 1 Score: 66.2 bits (160), Expect = 4.330e-10 Identity = 39/126 (30.95%), Postives = 61/126 (48.41%), Query Frame = 1 Query: 82 MKEGTDPDTFLAEVQDLANKLEYLGEGVSDARLADIVLQGLPPSYDQLRLMADMDSGFTFAKIERTARNMYKSHSRGRQQQRHGHQRDTHVRDSGMVAFSSKPHGSTQLTCHSCGEPGHVQRLCPR 459 M+ +PD F E+ L + L +GE +S R DI +QG Y +++M D F +++ T RN++ +Q R G + R M +S + CHSC EPGH++R CP+ Sbjct: 1 MEPVENPDDFFNEIHRLRSHLAKIGETISGRRFKDICVQGFSEDYKDIKMMVFRDPSFDEQQMQSTMRNIFLD-----EQSRKGWKGRIAGRGFAMATTASN------IICHSCYEPGHIRRNCPK 115
BLAST of mRNA_L-elsbetiae_contig16109.4199.1 vs. uniprot
Match: A0A6H5K8X5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8X5_9PHAE) HSP 1 Score: 66.6 bits (161), Expect = 7.500e-10 Identity = 41/137 (29.93%), Postives = 65/137 (47.45%), Query Frame = 1 Query: 49 RELIAELNSISMKEGTDPDTFLAEVQDLANKLEYLGEGVSDARLADIVLQGLPPSYDQLRLMADMDSGFTFAKIERTARNMYKSHSRGRQQQRHGHQRDTHVRDSGMVAFSSKPHGSTQLTCHSCGEPGHVQRLCPR 459 R + EL + M G +PD + + L L+ +GE +SD R +I +QG Y +LM D F ++ T RN++ +Q R G + R+ + +S + CHSC EPGH++R CP+ Sbjct: 135 RAKMEELENKPMNPGENPDDYFNQKHLLRAHLDKMGEPISDRRFKNICVQGFSDEYKGFKLMVVRDPTFNALDMQSTMRNIFSD-----EQSRKGWKGRIGGREFATASTAS------DIICHSCYEPGHIRRNCPK 260
BLAST of mRNA_L-elsbetiae_contig16109.4199.1 vs. uniprot
Match: A0A6H5KXR7_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR7_9PHAE) HSP 1 Score: 66.2 bits (160), Expect = 8.430e-10 Identity = 43/137 (31.39%), Postives = 65/137 (47.45%), Query Frame = 1 Query: 49 RELIAELNSISMKEGTDPDTFLAEVQDLANKLEYLGEGVSDARLADIVLQGLPPSYDQLRLMADMDSGFTFAKIERTARNMYKSHSRGRQQQRHGHQRDTHVRDSGMVAFSSKPHGSTQLTCHSCGEPGHVQRLCPR 459 R + EL + M G +PD + + + +L+ +GE +SD R DI +QG Y ++LM D F ++ T RN S +Q R G + R M +S + CHSC EPGH++R CP+ Sbjct: 93 RAKMEELENNPMNPGENPDDYFNQKHLIRAQLDKMGEPISDRRCKDIWVQGFSDEYRDVKLMVFRDPTFNALGMQSTIRNT----SWTNEQSRKGWKGRIAGRGFAMATTAS------DIICHSCYEPGHIRRNCPK 219 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16109.4199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16109.4199.1 >prot_L-elsbetiae_contig16109.4199.1 ID=prot_L-elsbetiae_contig16109.4199.1|Name=mRNA_L-elsbetiae_contig16109.4199.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=158bp WSDLLDKFQPDDQQYRRELIAELNSISMKEGTDPDTFLAEVQDLANKLEYback to top mRNA from alignment at L-elsbetiae_contig16109:1047..1520+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16109.4199.1 ID=mRNA_L-elsbetiae_contig16109.4199.1|Name=mRNA_L-elsbetiae_contig16109.4199.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=474bp|location=Sequence derived from alignment at L-elsbetiae_contig16109:1047..1520+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16109:1047..1520+ >mRNA_L-elsbetiae_contig16109.4199.1 ID=mRNA_L-elsbetiae_contig16109.4199.1|Name=mRNA_L-elsbetiae_contig16109.4199.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=948bp|location=Sequence derived from alignment at L-elsbetiae_contig16109:1047..1520+ (Laminarionema elsbetiae ELsaHSoW15)back to top |