mRNA_L-elsbetiae_contig16050.4170.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16050.4170.1 vs. uniprot
Match: A0A6H5JAQ6_9PHAE (Dynamin-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAQ6_9PHAE) HSP 1 Score: 205 bits (522), Expect = 6.780e-61 Identity = 97/115 (84.35%), Postives = 107/115 (93.04%), Query Frame = 1 Query: 1 GAEPTTDKFTVVIHGEEDRPVEGNSLALIKELPYQGLTRFGTGFLNKLDAAISTSPFLENITLVDTPGVLSGEMHRHQRAYSFPDVARWFADRSDMILILFDAHRLDVSDELMEV 345 G EPTTDKFTVVIHG+EDRPVEGNSLA++KELPY+GL RFG+G L+KLDAAISTSPFLENITLVDTPG+LSGEM HQRAYSF DV RWF DRSD+IL+LFDAHRLDVSDELME+ Sbjct: 4 GPEPTTDKFTVVIHGQEDRPVEGNSLAVVKELPYEGLRRFGSGLLDKLDAAISTSPFLENITLVDTPGILSGEMQMHQRAYSFTDVCRWFGDRSDLILVLFDAHRLDVSDELMEI 118
BLAST of mRNA_L-elsbetiae_contig16050.4170.1 vs. uniprot
Match: D7G5K7_ECTSI (RME1L2, RME1-like GTPase/ATPase without a C-terminal EH domain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K7_ECTSI) HSP 1 Score: 204 bits (518), Expect = 8.280e-60 Identity = 97/115 (84.35%), Postives = 107/115 (93.04%), Query Frame = 1 Query: 1 GAEPTTDKFTVVIHGEEDRPVEGNSLALIKELPYQGLTRFGTGFLNKLDAAISTSPFLENITLVDTPGVLSGEMHRHQRAYSFPDVARWFADRSDMILILFDAHRLDVSDELMEV 345 G EPTTDKFTVVIHG+EDRPVEGN LA++KELPY+GL+RFG G L+KLDAAISTSPFLENITLVDTPGVLSGEM HQRAYSF DV+RWF DRSD+IL+LFDAHRLDVSDELME+ Sbjct: 92 GPEPTTDKFTVVIHGQEDRPVEGNILAVVKELPYEGLSRFGPGLLDKLDAAISTSPFLENITLVDTPGVLSGEMQMHQRAYSFADVSRWFGDRSDLILVLFDAHRLDVSDELMEI 206
BLAST of mRNA_L-elsbetiae_contig16050.4170.1 vs. uniprot
Match: A0A835YIA7_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIA7_9STRA) HSP 1 Score: 172 bits (437), Expect = 7.580e-51 Identity = 79/115 (68.70%), Postives = 97/115 (84.35%), Query Frame = 1 Query: 1 GAEPTTDKFTVVIHGEEDRPVEGNSLALIKELPYQGLTRFGTGFLNKLDAAISTSPFLENITLVDTPGVLSGEMHRHQRAYSFPDVARWFADRSDMILILFDAHRLDVSDELMEV 345 G EPTTD FTV++HG+EDR V GNS I LPY GL +FGTGFL +L A+IS SPFLE+ITLVDTPG L+GE H+H+R+YSFP VARWFADRSD+I+++FDAH+LD+SDEL +V Sbjct: 43 GPEPTTDSFTVLVHGDEDRSVAGNSFTRITSLPYSGLLQFGTGFLRRLTASISPSPFLEHITLVDTPGALTGEAHQHRRSYSFPVVARWFADRSDLIVLIFDAHKLDISDELRDV 157
BLAST of mRNA_L-elsbetiae_contig16050.4170.1 vs. uniprot
Match: A0A7S2KM23_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KM23_9STRA) HSP 1 Score: 156 bits (394), Expect = 4.060e-43 Identity = 74/120 (61.67%), Postives = 93/120 (77.50%), Query Frame = 1 Query: 1 GAEPTTDKFTVVIHGEED-----RPVEGNSLALIKELPYQGLTRFGTGFLNKLDAAISTSPFLENITLVDTPGVLSGEMHRHQRAYSFPDVARWFADRSDMILILFDAHRLDVSDELMEV 345 G EPTTDKF V+HG ED R ++GNSL ++ ELP+ GL FGT FLNK +A+++ SP L+ +TL+DTPGVLSGE R RAY F +VARWFADRSD+IL+LFDAH+LD+SDEL E+ Sbjct: 117 GPEPTTDKFIAVVHGCEDGAESGRIIKGNSLTVVPELPFAGLGEFGTAFLNKFEASVTPSPLLKRVTLIDTPGVLSGEKQRLARAYDFSEVARWFADRSDLILLLFDAHKLDISDELKEI 236
BLAST of mRNA_L-elsbetiae_contig16050.4170.1 vs. uniprot
Match: F0WLM2_9STRA (Uncharacterized protein AlNc14C147G7411 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WLM2_9STRA) HSP 1 Score: 148 bits (373), Expect = 2.780e-42 Identity = 68/115 (59.13%), Postives = 89/115 (77.39%), Query Frame = 1 Query: 1 GAEPTTDKFTVVIHGEEDRPVEGNSLALIKELPYQGLTRFGTGFLNKLDAAISTSPFLENITLVDTPGVLSGEMHRHQRAYSFPDVARWFADRSDMILILFDAHRLDVSDELMEV 345 G EPTTD+F V++G+E+R + GN++A+ +LPY GL+ FGT FLNK +AA S LENI+++DTPG+LSGE R QR Y F VARWFA+RSD+IL+LFDAH+LD+SDE V Sbjct: 99 GPEPTTDRFVAVMYGDEERTIPGNAVAVSPDLPYGGLSMFGTAFLNKFEAAQLPSKVLENISVIDTPGILSGEKQRIQRGYDFVQVARWFAERSDLILLLFDAHKLDISDEFQRV 213
BLAST of mRNA_L-elsbetiae_contig16050.4170.1 vs. uniprot
Match: A0A812RPE9_SYMMI (Ehd1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RPE9_SYMMI) HSP 1 Score: 149 bits (375), Expect = 9.250e-41 Identity = 68/115 (59.13%), Postives = 88/115 (76.52%), Query Frame = 1 Query: 1 GAEPTTDKFTVVIHGEEDRPVEGNSLALIKELPYQGLTRFGTGFLNKLDAAISTSPFLENITLVDTPGVLSGEMHRHQRAYSFPDVARWFADRSDMILILFDAHRLDVSDELMEV 345 G EPTTDKF V HGEE + ++GNSL + +LPY GL+ FG GFLNK +AA+ SP L++IT++DTPGVLSGE R R Y F V+RWFA+RSD+IL+LFD+++LD+SDE V Sbjct: 49 GPEPTTDKFIAVAHGEESKVIKGNSLTAVNDLPYAGLSVFGGGFLNKFEAALCNSPVLKDITIIDTPGVLSGEKQRLSRGYDFAQVSRWFAERSDLILLLFDSYKLDISDEFKGV 163
BLAST of mRNA_L-elsbetiae_contig16050.4170.1 vs. uniprot
Match: K3WW01_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WW01_GLOUD) HSP 1 Score: 150 bits (379), Expect = 1.470e-40 Identity = 71/115 (61.74%), Postives = 87/115 (75.65%), Query Frame = 1 Query: 1 GAEPTTDKFTVVIHGEEDRPVEGNSLALIKELPYQGLTRFGTGFLNKLDAAISTSPFLENITLVDTPGVLSGEMHRHQRAYSFPDVARWFADRSDMILILFDAHRLDVSDELMEV 345 G EPTTD+F V+HGEE+R + GN++A+ +LPY GL+ FGT FLNK +AA LENIT+VDTPG+LSGE R R Y F VARWFA+RSDMIL+LFDAH+LD+SDE V Sbjct: 106 GPEPTTDRFVAVMHGEEERTIPGNAVAVSPDLPYGGLSMFGTAFLNKFEAAQVPCKVLENITVVDTPGILSGEKQRIARGYDFVQVARWFAERSDMILLLFDAHKLDISDEFQRV 220
BLAST of mRNA_L-elsbetiae_contig16050.4170.1 vs. uniprot
Match: A0A3F2RDZ0_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RDZ0_9STRA) HSP 1 Score: 150 bits (378), Expect = 2.270e-40 Identity = 69/115 (60.00%), Postives = 87/115 (75.65%), Query Frame = 1 Query: 1 GAEPTTDKFTVVIHGEEDRPVEGNSLALIKELPYQGLTRFGTGFLNKLDAAISTSPFLENITLVDTPGVLSGEMHRHQRAYSFPDVARWFADRSDMILILFDAHRLDVSDELMEV 345 G EPTTD+F V+HG+E+R V GN+ A+ +LPY GL+ FGT FLNK +AA +P LE +T+VDTPG+LSGE R R Y F VARWFA+RSD+IL+LFDAH+LD+SDE V Sbjct: 102 GPEPTTDRFVAVMHGDEERTVPGNAAAVAPDLPYGGLSMFGTAFLNKFEAAQLPAPLLEQLTIVDTPGILSGEKQRIARGYDFTQVARWFAERSDLILLLFDAHKLDISDEFQRV 216
BLAST of mRNA_L-elsbetiae_contig16050.4170.1 vs. uniprot
Match: A0A024G737_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G737_9STRA) HSP 1 Score: 149 bits (377), Expect = 2.420e-40 Identity = 69/115 (60.00%), Postives = 89/115 (77.39%), Query Frame = 1 Query: 1 GAEPTTDKFTVVIHGEEDRPVEGNSLALIKELPYQGLTRFGTGFLNKLDAAISTSPFLENITLVDTPGVLSGEMHRHQRAYSFPDVARWFADRSDMILILFDAHRLDVSDELMEV 345 G EPTTD+F V++G+E+R + GN++A+ +LPY GL+ FGT FLNK +AA S LENIT++DTPG+LSGE R QR Y F VARWFA+RSD+IL+LFDAH+LD+SDE V Sbjct: 112 GPEPTTDRFVAVMYGDEERTIPGNAVAVSPDLPYGGLSMFGTAFLNKFEAAQLPSKVLENITVIDTPGILSGEKQRIQRGYDFVQVARWFAERSDLILLLFDAHKLDISDEFQRV 226
BLAST of mRNA_L-elsbetiae_contig16050.4170.1 vs. uniprot
Match: A0A662XWA9_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XWA9_9STRA) HSP 1 Score: 148 bits (374), Expect = 9.200e-40 Identity = 68/115 (59.13%), Postives = 86/115 (74.78%), Query Frame = 1 Query: 1 GAEPTTDKFTVVIHGEEDRPVEGNSLALIKELPYQGLTRFGTGFLNKLDAAISTSPFLENITLVDTPGVLSGEMHRHQRAYSFPDVARWFADRSDMILILFDAHRLDVSDELMEV 345 G EPTTD+F V+HG+E+R V GN+ A+ +LPY GL+ FGT FLNK + A +P LE +T+VDTPG+LSGE R R Y F VARWFA+RSD+IL+LFDAH+LD+SDE V Sbjct: 108 GPEPTTDRFVAVMHGDEERTVPGNAAAVAPDLPYGGLSMFGTAFLNKFETAQLPAPILEQLTIVDTPGILSGEKQRIARGYDFTQVARWFAERSDLILLLFDAHKLDISDEFQRV 222 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16050.4170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16050.4170.1 >prot_L-elsbetiae_contig16050.4170.1 ID=prot_L-elsbetiae_contig16050.4170.1|Name=mRNA_L-elsbetiae_contig16050.4170.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=115bp GAEPTTDKFTVVIHGEEDRPVEGNSLALIKELPYQGLTRFGTGFLNKLDAback to top mRNA from alignment at L-elsbetiae_contig16050:984..3632- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16050.4170.1 ID=mRNA_L-elsbetiae_contig16050.4170.1|Name=mRNA_L-elsbetiae_contig16050.4170.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2649bp|location=Sequence derived from alignment at L-elsbetiae_contig16050:984..3632- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16050:984..3632- >mRNA_L-elsbetiae_contig16050.4170.1 ID=mRNA_L-elsbetiae_contig16050.4170.1|Name=mRNA_L-elsbetiae_contig16050.4170.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=690bp|location=Sequence derived from alignment at L-elsbetiae_contig16050:984..3632- (Laminarionema elsbetiae ELsaHSoW15)back to top |