mRNA_L-elsbetiae_contig16046.4165.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16046.4165.1 vs. uniprot
Match: D7FKD1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKD1_ECTSI) HSP 1 Score: 285 bits (729), Expect = 3.950e-95 Identity = 133/166 (80.12%), Postives = 149/166 (89.76%), Query Frame = 1 Query: 1 ADVCVKSTGQSEVTIGKPTSVCLVVNGLEWTVDDTAATFYSQVLILPDADEFSRFSVKGSWNASNVIEDDPILTTFGTEVGVHVESMGKLSFQKAFRLRNDLKTFPIHTAVISVDEGEVTGISWDDGCHFCSSSQCQPNTYEYSGELVEGDGAGESCYWPDSECLQ 498 ADVCV S+G+++VTIG+ TSVCLVVNGL W VD TFYSQVLILPDADEFSRFSVKGSWNAS VIEDDPILTTFGTEVGVHVESMGK SFQKAFRLR + KTFP+HTA+ISVDEGEVTGISWDDGCHFC SSQC+ NTY+Y+G+L+ G+G G+ CYWPDS+CLQ Sbjct: 37 ADVCVLSSGKTDVTIGEETSVCLVVNGLGWEVD-ADLTFYSQVLILPDADEFSRFSVKGSWNASRVIEDDPILTTFGTEVGVHVESMGKYSFQKAFRLREEEKTFPLHTAIISVDEGEVTGISWDDGCHFCGSSQCEDNTYDYTGQLIGGEGNGQDCYWPDSDCLQ 201
BLAST of mRNA_L-elsbetiae_contig16046.4165.1 vs. uniprot
Match: A0A835ZB01_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB01_9STRA) HSP 1 Score: 149 bits (377), Expect = 7.130e-42 Identity = 76/163 (46.63%), Postives = 106/163 (65.03%), Query Frame = 1 Query: 19 STGQSEVTIGKPTSVCLVVNGLEWTVDDTAATFYSQVLILPDADEFSRFSVKGSWNA---SNVIEDDPILTTFGTEVGVHVESMGKLSFQKAFRLRNDLKTFPIHTAVISVDEGEVTGISWDDGCHFCSSSQCQPNTYEYSGELVEGDG---AGESCYWPDSE 489 +TG V +G T+VCL+VN L++ DTA T YSQ+ I P AD FSRF + GSW+A ++ + DP+L +G +V HVES G SFQK+FR + TFP+ TA+I+VD G +T I+WDDGCHFC+ CQ NT+ ++G DG G+ CY+ D++ Sbjct: 38 TTGAELVKVGNTTAVCLIVNPLDY---DTA-TNYSQISIFPAADSFSRFVIPGSWSAEYAASGTQTDPLLQKYGKDVAFHVESNGVASFQKSFRQASLGITFPLFTAIINVDRGNITSITWDDGCHFCARQFCQANTFNFAGTNTTADGQALGGKDCYYEDAK 196
BLAST of mRNA_L-elsbetiae_contig16046.4165.1 vs. uniprot
Match: A0A7S3UNI9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UNI9_HETAK) HSP 1 Score: 106 bits (264), Expect = 4.350e-25 Identity = 58/156 (37.18%), Postives = 83/156 (53.21%), Query Frame = 1 Query: 37 VTIGKPTSVCLVVNGLEWTVDDTAATFYSQVLILPDADEFSRFSVKGSWNASNVIEDDPILTTFGT--EVGVHVESMGKLSFQKAFRLRNDLKTFPIHTAVISVDEGEVTGISWDDGCHFCSSSQCQPNTYEYSGEL-VEGDGAGESCYWPDSECL 495 V G VCL + W +D+++ Y Q+ + DEFSR + SW + + DP+L +G E+ + + M S+QK +R D TFP+ V +DEG V G++WDDGC +CS S C NTYEY G L D G+ CY D+ C+ Sbjct: 40 VAQGDEVYVCLRIGNPNW--NDSSS--YHQLAFKVEVDEFSRIELTDSWQNA-LASVDPLLAAYGETGEIAISIGYMESFSYQKLYR--KDSNTFPLFQIVFVLDEGVVEGVTWDDGCLYCSGSSCTENTYEYDGSLYTSADLPGKDCYLADASCV 188
BLAST of mRNA_L-elsbetiae_contig16046.4165.1 vs. uniprot
Match: W7TT05_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TT05_9STRA) HSP 1 Score: 106 bits (264), Expect = 4.350e-25 Identity = 60/156 (38.46%), Postives = 89/156 (57.05%), Query Frame = 1 Query: 31 SEVTIGKPTSVCLVVNGLEWTVDDTAATFYSQVLILPDADEFSRFSVKGSWNASNVIEDDPILTTFGTEVGVHVESMGKLSFQKAFRLRNDL-KTFPIHTAVISVDEGEVTGISWDDGCHFCSSS-QCQPNTYEYSGELVEGDGAGESCYWPDSEC 492 S VT + T VC+V + W + +S+V P D F+R ++ SN+ + +G V VHVESMG SFQK +R + L +TF + TA+I++D G VTGI++D+GC C +S +C NTY+++GE G GA C+ D+EC Sbjct: 40 SGVTQAQGTYVCIVFSAPAW---QEGTSNFSRVAFTPTVDRFTRLQFSDTF--SNLTSQG-VANLYGPNVAVHVESMGVASFQKLYRQEDSLGRTFSVLTAIINLDRGVVTGITFDNGCPLCDNSDRCVENTYDFTGERYTGVGATSDCFLTDAEC 189
BLAST of mRNA_L-elsbetiae_contig16046.4165.1 vs. uniprot
Match: A0A1E7ERI0_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ERI0_9STRA) HSP 1 Score: 101 bits (251), Expect = 6.790e-23 Identity = 56/142 (39.44%), Postives = 84/142 (59.15%), Query Frame = 1 Query: 25 GQSEVTIGKPTSVCLVV--NGLEWTVDDTAATFYSQVLILPDADEFSRFSVKGSWNASNVIEDDPILTTFGTEVGVHVESMGKLSFQKAFRLRNDLKTFPIHTAVISVDEGEVTGISWDDGCHFCSSSQCQPNTYEYSGELV 444 G VTIG+PT++CLV+ NG +W+ D Y ++ P AD++SRF V S+ + + F + VH ES LSFQK + D K FP TA+I+V++G VTGI+WD+ C FC++ +C+ NTY ++G + Sbjct: 59 GYEAVTIGQPTTICLVLASNG-DWSTDME----YMRLNFQPIADDYSRFHVPDSFTQLIGSPKEALTKIFPGNITVHSESQTALSFQKLYYNGAD-KVFPFLTAIIAVEKGNVTGITWDNACVFCANDECEDNTYGFNGGIA 194
BLAST of mRNA_L-elsbetiae_contig16046.4165.1 vs. uniprot
Match: A0A8K1CV35_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CV35_PYTOL) HSP 1 Score: 83.6 bits (205), Expect = 1.510e-16 Identity = 55/166 (33.13%), Postives = 82/166 (49.40%), Query Frame = 1 Query: 7 VCVKSTGQSEVTIGKPTSVCLVVNGLEWTVDDTAATFYSQVLILPDADEFSRFSVKGSWNASNVIEDDPILTTFGTEVGVHVESMGKLSFQKAFRLRNDLKTFPIHTAVISVDEGEVTGISWDDGCHFCSSSQCQPNTYEY----SGELVEGDGAGESCYWPDSEC 492 +C S ++T G+ T VC+ VN T L +P D+F+ V SWN + + D L +F T + + S KL + + +P TA++SV +GEVTG++WDDGC+FC S C+PN+Y Y S +L G G +C+ S C Sbjct: 33 LCSPSATPPKITKGERTYVCVNVNDKYRT------------LFMPVTDQFTVLRVTDSWNDTRIGGD--ALGSFVTVSTMAMRSTYKLYASERGHI------YPYMTAIVSVKKGEVTGVTWDDGCYFCDHSMCEPNSYRYPTNVSSQLT---GEGYTCFNQMSSC 175
BLAST of mRNA_L-elsbetiae_contig16046.4165.1 vs. uniprot
Match: F0WG02_9STRA (Uncharacterized protein AlNc14C86G5535 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WG02_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 2.030e-15 Identity = 58/164 (35.37%), Postives = 78/164 (47.56%), Query Frame = 1 Query: 4 DVCVKSTGQSEVTIGKPTSVCLVVNGLEWTVDDTAATFYSQVLILPDADEFSRFSVKGSWNASNVIEDDPILTTFGTEVGVHVESMGKLSFQKAFRLRNDLKTFPIHTAVISVDEGEVTGISWDDGCHFCSSSQCQPNTYE-YSGELVEGDGAGESCYWPDSEC 492 +VC ST V G+ T VC+ +N ++ A F P AD+FS S++ SWN S I +P V V S+G + K + N FP TA+ISV +G V G++WDDGC FCS C PN Y + ++ G SCY S C Sbjct: 27 NVCSPSTAFPPVVQGELTWVCININ------NEFRAVF------TPTADKFSVISIRESWNDSR-IGGNP------EGASVSVSSLGNRTLYKRYAHEN--VRFPYLTAIISVKQGLVQGVTWDDGCFFCSRDACLPNLYSSITNTSLQLPHQGFSCYTNTSIC 169
BLAST of mRNA_L-elsbetiae_contig16046.4165.1 vs. uniprot
Match: H3GV88_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GV88_PHYRM) HSP 1 Score: 77.0 bits (188), Expect = 4.930e-14 Identity = 51/170 (30.00%), Postives = 74/170 (43.53%), Query Frame = 1 Query: 1 ADVCVKSTGQSEVTIGKPTSVCLVVNGLEWTVDDTAATFYSQVLILPDADEFSRFSVKGSWNASNVIEDDPILTTFGTEVGVHVESMGKLSFQKAFRLRNDLKT---FPIHTAVISVDEGEVTGISWDDGCHFCSSSQCQPNTYEYSGELVEG--DGAGESCYWPDSECL 495 + +C S V G T VC+ VN T L P AD+F+ V SWN + + G ++ L ++ ++L + T P TA+ISV +G V G+SWD+GC+FC++ C N Y E G G G++CY P CL Sbjct: 13 SSICSPSDPVPLVVKGDTTYVCVNVNNEYRT------------LFTPVADKFTVLRVSDSWNDTRI----------GANPSGAFLTVSSLKYRTNYKLYSSASTGRISPYMTAIISVKKGAVQGVSWDEGCYFCTAEMCDYNLYSKPEESATGRLSGQGKTCYTPADSCL 160
BLAST of mRNA_L-elsbetiae_contig16046.4165.1 vs. uniprot
Match: A0A024TMK2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TMK2_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 2.930e-12 Identity = 51/170 (30.00%), Postives = 72/170 (42.35%), Query Frame = 1 Query: 10 CVKSTGQSEVTIGKPTSVCLVVNGLEWTVDDTAATFYSQVLILPDADEFSRFSVKGSWNASNVIEDDPILTTFGTEVGVHVESMGKLSFQKAFRLRNDLKTFPIHTAVISVDEGEVTGISWDDGCHFCSSSQCQPNTYE------YSGELVEGDGAGESCYWPDSECLQV 501 C G + V G T +C+ +N D A F P D++ + + S+ D + T + + + SM S K + K +PI TAV+SV +GEV GISWDDGC+ C + C PN Y YS G G +CY +EC Sbjct: 29 CNDRNGTTPVVKGDQTYICININ------DQYRAVF------APVVDKYVQLRLHDSYI------DSRLRPTNSSAAYMTISSMASRSVYKQYTTARG-KAYPILTAVVSVKQGEVQGISWDDGCYLCDMASCDPNLYSMPTIPLYSTAF----GDGSTCYKDHAECTNT 175
BLAST of mRNA_L-elsbetiae_contig16046.4165.1 vs. uniprot
Match: W4FBH2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FBH2_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 4.020e-12 Identity = 48/166 (28.92%), Postives = 71/166 (42.77%), Query Frame = 1 Query: 10 CVKSTGQSEVTIGKPTSVCLVVNGLEWTVDDTAATFYSQVLILPDADEFSRFSVKGSWNASNVIEDDPILTTFGTEVGVHVESMGKLSFQKAFRLRNDLKTFPIHTAVISVDEGEVTGISWDDGCHFCSSSQCQPNTYEYSGELVEGD--GAGESCYWPDSECLQV 501 C + V G T +C+ +N D A F P D++ + + S+ + + + + T + SM S K + K +PI TAV+SV +GEV GISWDDGC+ C S+ C+ N Y + G G +CY ECL Sbjct: 27 CNDRNATTPVVKGDQTYICININ------DQYRAVF------APVVDQYVQLRLYESYTDTRIRPTNSSAAAYMT-----ISSMSSRSVYKQYTTAKG-KAYPILTAVVSVKQGEVQGISWDDGCYLCDSTTCEANLYSTPAIPLYNSAFGDGSTCYKESPECLNT 174 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16046.4165.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16046.4165.1 >prot_L-elsbetiae_contig16046.4165.1 ID=prot_L-elsbetiae_contig16046.4165.1|Name=mRNA_L-elsbetiae_contig16046.4165.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=168bp ADVCVKSTGQSEVTIGKPTSVCLVVNGLEWTVDDTAATFYSQVLILPDADback to top mRNA from alignment at L-elsbetiae_contig16046:91..2523+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16046.4165.1 ID=mRNA_L-elsbetiae_contig16046.4165.1|Name=mRNA_L-elsbetiae_contig16046.4165.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2433bp|location=Sequence derived from alignment at L-elsbetiae_contig16046:91..2523+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16046:91..2523+ >mRNA_L-elsbetiae_contig16046.4165.1 ID=mRNA_L-elsbetiae_contig16046.4165.1|Name=mRNA_L-elsbetiae_contig16046.4165.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1008bp|location=Sequence derived from alignment at L-elsbetiae_contig16046:91..2523+ (Laminarionema elsbetiae ELsaHSoW15)back to top |