mRNA_L-elsbetiae_contig16.4140.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16.4140.1 vs. uniprot
Match: D7FM65_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM65_ECTSI) HSP 1 Score: 199 bits (505), Expect = 7.010e-53 Identity = 207/388 (53.35%), Postives = 239/388 (61.60%), Query Frame = 1 Query: 31 MPQYEERASILQGEGAAIFNMVCDRATPKQWAEWLRAPLEHAAGTANADLVDKLLKAGADGSAGWKGCHGKSLLHAGAEGGDERVVSALMRAGAKEDMDTKAHSKRRTPLHLAVRGGKVAAAKVLIMAGADVNILDADGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKTSNTASSPLHTACAKGKLDAADLLLRWGADETALDKKGKTPSARMPDIATAVAEDRPKLEHLSKLLACAPQDRAWRRRGMLVLCRAHPD 1194 M +++R S L G G I ++VCD ATP+QW +WLR PLEHAAGT NA LV+KLLK GA+ SAGW+GC G++L+HAGAEGG E+V+S L RAGA + ++ +A TPLHLAV GGK+AA KVL++AGADVN LDAD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AK + + LHTAC DAADLLLRWGADETA+D G T SA +P I A E+ P + L+KLL A QDR WRRRG+LV+CRAHP+ Sbjct: 1 MSTHQDRKSTLHGTGDMILDLVCDLATPRQWTKWLRVPLEHAAGTGNAALVEKLLKVGANASAGWRGCDGRTLMHAGAEGGSEQVISMLTRAGAGKYINDQAPLSGLTPLHLAVSGGKLAATKVLMLAGADVNRLDAD---------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCHALDAGHISTVNVSLGWGCLWLEPTSKTCIAGRPPLCVSTFSISYFAAMLALLKLGADLHAKCPHNGMTALHTACHVVNPDAADLLLRWGADETAVDWNGATTSAVIPRIDEAPEENGPAILRLTKLLKFADQDRTWRRRGLLVMCRAHPE 361
BLAST of mRNA_L-elsbetiae_contig16.4140.1 vs. uniprot
Match: D7G2A3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A3_ECTSI) HSP 1 Score: 193 bits (491), Expect = 7.730e-50 Identity = 211/501 (42.12%), Postives = 237/501 (47.31%), Query Frame = 1 Query: 31 MPQYEERASILQGEGAAIFNMVCDRATPKQWAEWLRAPLEHAAGTANADLVDKLLKAGADGSAGWKGCHGKSLLHAGAEGGDERVVSALMRAGAKEDMDTKAHSKRRTPLHLAVRGGKVAAAKVLIMAGADVNILDADGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKTSNTASSPLHTACAKGKLDAADLLLRWGADETALDKKG-KTPSAR-MPDIATAVAEDRPKLEHLSKLLACAPQDRAWRRRGMLVLCRAHPDRLRLVVEI-SDTAEASGQPQSR-----------------------------SSRRARRDQVKVEVTMGGAPNGGAXXXXXXXXXXXXFDGVAAWLMALTNEDIFRKIVGFL 1437 MP YEERASILQ G IF +VCDRATP+QWAEWLRAPLEHAAGT N DLVDKLL AGA+ AGW+GCHGK+LLHA AEGG+ V+++L RAGA DM K+ TPL LAV GGK AAAK LIMAGADVN LDA +G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXX +T +R M +A + RP E +SKLLA APQDRAWRRRG LVLCRAHPDR+RL V+I + AEA+ Q R S RAR + + G FDG +AW+MALT E++FRKIVGFL Sbjct: 1 MPGYEERASILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAGRDMKAKSLDTGHTPLDLAVIGGKEAAAKALIMAGADVNTLDATNDGLLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWHGLDEVVLALGEKGVDLNCLNSKGETPLRLAVRGDHVTTVKVLLSEGADPHFRAANRPLKLLHVAAKRNRAAAIPALFEAGVNIEGRTSSGRTPLRYAAIYDSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETVVSRVMQGMAESSEARRPFFERISKLLARAPQDRAWRRRGFLVLCRAHPDRVRLAVKIPAAAAEATEGLQERPRXXXXXXXXXXXXXXXXXXXXXXXXXXXSGARARIEAAREGTVCG-------------------FDGFSAWMMALTEENLFRKIVGFL 482
BLAST of mRNA_L-elsbetiae_contig16.4140.1 vs. uniprot
Match: D8LHQ7_ECTSI (F-box domain and ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ7_ECTSI) HSP 1 Score: 181 bits (459), Expect = 3.490e-47 Identity = 98/148 (66.22%), Postives = 112/148 (75.68%), Query Frame = 1 Query: 13 VNHCSAM-PQYEERASILQGEGAAIFNMVCDRATPKQWAEWLRAPLEHAAGTANADLVDKLLKAGADGSAGWKGCHGKSLLHAGAEGGDERVVSALMRAGAKEDMDTKAHSKRRTPLHLAVRGGKVAAAKVLIMAGADVNILDADGEG 453 V H S++ P YEER+SILQ G F +V DRATP QWAEWLRAPLEHAA T N DLVDKLL AGA+G AGW+GCHGK+LLHA AEGG+ +V++ L AGA EDM KA TPL LAV GGK AAAK LIMAGA+VN+LDA +G Sbjct: 36 VRHTSSIIPGYEERSSILQDLGDTTFKLVRDRATPDQWAEWLRAPLEHAAATGNRDLVDKLLGAGANGGAGWRGCHGKTLLHAAAEGGNVQVITRLRNAGAGEDMKAKALDTGHTPLDLAVIGGKEAAAKALIMAGANVNMLDATNDG 183
BLAST of mRNA_L-elsbetiae_contig16.4140.1 vs. uniprot
Match: D7FQP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP1_ECTSI) HSP 1 Score: 170 bits (430), Expect = 2.280e-42 Identity = 90/137 (65.69%), Postives = 107/137 (78.10%), Query Frame = 1 Query: 43 EERASILQGEGAAIFNMVCDRATPKQWAEWLRAPLEHAAGTANADLVDKLLKAGADGSAGWKGCHGKSLLHAGAEGGDERVVSALMRAGAKEDMDTKAHS-KRRTPLHLAVRGGKVAAAKVLIMAGADVNILDADGE 450 E+RA L IF ++CDRAT +QWAEWLRAPLEHAAGTAN DLV+KLLKAGADGSAGW+GC K+LLHA AEGG+E VV+AL+RAGA EDM+ K TPLH+AV GK AAA+VL++AGADVN D +G+ Sbjct: 9 EDRAKTLGDAAGIIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALVRAGAGEDMEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGD 145
BLAST of mRNA_L-elsbetiae_contig16.4140.1 vs. uniprot
Match: A0A6H5KB54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB54_9PHAE) HSP 1 Score: 168 bits (425), Expect = 3.210e-41 Identity = 212/438 (48.40%), Postives = 230/438 (52.51%), Query Frame = 1 Query: 163 TANADLVDKLLKAGADGSAGWKGCHGKSLLHAGAEGGDERVVSALMRAGAKEDMDTKAHSKRRTPLHLAVRGGKVAAAKVLIMAGADVNILDADGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKTSNTASSPLHTACAKGKLDAADLLLRWGADETALDKKGKTPSARMPDIATAVAEDRPKLEHLSKLLACAPQDRAWRRRGMLVLCRAHPDRLRLVVEISDTA-EASG---QPQSRSSRRARRDQ---VKVEV------TMGGAPNGGAXXXXXXXXXXXXFDGVAAWLMALTNEDIFRKIVGFL 1437 TAN +LV KLL+AGADG GW+GCH K+LLHA A+GGD VVS L RAGA+ D + +A TPLHLAV GG A AK L MA ADVN+LDA GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX ETA+D +G TPS +P IA A ED +LE LSKLL APQDRAWRRRG L LCRAHPDRLRLVVEI TA EASG Q Q R SRRAR+ Q V VEV G + F+ A WL+AL ED+FRKIVGFL Sbjct: 21 TANNELVSKLLRAGADGGVGWRGCHDKTLLHAAAKGGDALVVSLLQRAGARADFEAEAPGTGHTPLHLAVLGGNAATAKALTMAEADVNVLDAMNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDIVVALAHKGVDLEGVAEPPLLRAVRQDHISTVRVLLAVGANANNPFSDYDYGTTVLHFAAETDNAVAIPVLIEAGASVQSSDMYDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKETAVDLQGSTPSEFIPAIAEAADEDHRRLERLSKLLTRAPQDRAWRRRGFLALCRAHPDRLRLVVEIPKTADEASGKQPQEQERPSRRARKGQQSKVDVEVDDAHGSVSGEGSSRAGIVRVDGKGDGGGFEFAAGWLVALAEEDVFRKIVGFL 458
BLAST of mRNA_L-elsbetiae_contig16.4140.1 vs. uniprot
Match: A0A6H5JU78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU78_9PHAE) HSP 1 Score: 162 bits (409), Expect = 6.120e-40 Identity = 148/477 (31.03%), Postives = 172/477 (36.06%), Query Frame = 1 Query: 31 MPQYEERASILQGEGAAIFNMVCDRATPKQWAEWLRAPLEHAAGTANADLVDKLLKAGADGSAGWKGCHGKSLLHAGAEGGDERVVSALMRAGAKEDMDTKAHSKRRTPLHLAVRGGKVAAAKVLIMAGADVNILDADGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKTSNTASSPLHTACAKGKLDAADLLLRWGADETALDKKGKTPSAR-MPDIATAVAEDRPKLEHLSKLLACAPQDRAWRRRGMLVLCRAHPDRLRLVVEISDTA-EASGQPQSRSSRRARRDQVKVEVTMGGAPNGGAXXXXXXXXXXXX------FDGVAAWLMALTNEDIFRKIVGFL 1437 MP Y+ER+SILQ G IF +VCD ATP+QWAEWLRAPLEHAA T GA D+ KA TPL L V GGK AAAK LIMAGAD ++ + N + L +AC+ G DAA LLL WG DE A+D +G+T M IA A A RP LE LS+LLA APQDRAWRRRG LVL R HPDR+RL VEI A +A+ QPQ R RRA QV+V+ T GG GA F GV+AW+MALT E +FR+IVGFL Sbjct: 1 MPGYKERSSILQDLGDTIFKLVCDWATPEQWAEWLRAPLEHAAAT-----------------------------------------------GAGGDIKAKAPHTWHTPLDLTVTGGKEAAAKALIMAGADGHMWE---------------------------------------------------------------HRVAKDLLLSGANPIQAGSNGNFPIHLAACHGLDEVVLAVVEKGIDLNCLNNKREIPLLLALLRIAACENKAAAIRVLFEAGADIEARLTLFQLGAKVNSKENERITSLSSACSFGNHDAAGLLLSWGGDENAMDSEGETVVFMVMQQIAEAPASVRPPLERLSRLLARAPQDRAWRRRGFLVLGRVHPDRVRLAVEIPPAAADATEQPQQRPRRRASTGQVEVDGTNGGGGXTGASSGVRAGIEAVHEGTVAGFGGVSAWMMALTEEGVFRRIVGFL 367
BLAST of mRNA_L-elsbetiae_contig16.4140.1 vs. uniprot
Match: D7FQP2_ECTSI (Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP2_ECTSI) HSP 1 Score: 156 bits (394), Expect = 1.940e-38 Identity = 81/132 (61.36%), Postives = 97/132 (73.48%), Query Frame = 1 Query: 43 EERASILQGEGAAIFNMVCDRATPKQWAEWLRAPLEHAAGTANADLVDKLLKAGADGSAGWKGCHGKSLLHAGAEGGDERVVSALMRAGAKEDMDTKAHSKRRTPLHLAVRGGKVAAAKVLIMAGADVNILD 438 E+R IL IF ++CDRAT +QW EWLRAPLEHAAGTAN DLV+KLLKAGADGSAGW+GC +LLHA VV+AL+RAGA EDM+ K TPLH+AV G+ AAA+VL++AGADVN +D Sbjct: 9 EDRVKILGDAADMIFKLMCDRATSEQWTEWLRAPLEHAAGTANRDLVEKLLKAGADGSAGWRGCDDNTLLHAAXXXXXXXVVTALIRAGAGEDMEAKTPGTGGTPLHVAVMRGQEAAARVLVLAGADVNAVD 140
BLAST of mRNA_L-elsbetiae_contig16.4140.1 vs. uniprot
Match: D7FPN3_ECTSI (Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPN3_ECTSI) HSP 1 Score: 158 bits (400), Expect = 3.160e-38 Identity = 263/468 (56.20%), Postives = 294/468 (62.82%), Query Frame = 1 Query: 37 QYEERASILQGEGAAIFNMVCDRATPKQWAEWLRAPLEHAAGTANADLVDKLLKAGADGSAGWKGCHGKSLLHAGAEGGDERVVSALMRAGAKEDMDTKAHSKRRTPLHLAVRGGKVAAAKVLIMAGADVNILDADGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKTSNTASSPLHTACAKGKLDAADLLLRWGADETALDKKGKTPSARMPDIATAVAEDRPKLEHLSKLLACAPQDRAWRRRGMLVLCRAHPDRLRL-VVEISDTAEASGQPQSRSSRRARRDQVKVEVTMGGAPNGGAXXXXXXXXXXXXFDGVAAWLMALTNEDIFRKIVGFL 1437 +YE+RA+IL+G F +VCDRATP+QWAEWLRAPLEHAA TA+ DLV KLL AGA+GS GW GC GK+LLHA AEGG+ +V+ AL+RAGA D DT A K RTP ADV+ LD D + XXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DET +D +G+T R+P I V E RP +E LSK+LA APQDRAW RRG LV+CRA PD++RL +I D A QPQ R D+ V G+AA L+ L +ED+FRK+VG L Sbjct: 6 RYEDRANILRGSEDTTFRLVCDRATPEQWAEWLRAPLEHAAATADHDLVKKLLNAGANGSTGWVGCDGKTLLHAAAEGGNAQVIMALLRAGAAGDKDTAASYKERTPXXXXXXXXXXXXXXXXXXXXADVHSLDTDQDXXXXXXXXXXXXXXXXXXXXXXXXPNDEVVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASFRLANATTVLHVAAEYNEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------XXXDETIVDNRGRTAYQRLPAIDNVVEEYRPGIERLSKVLARAPQDRAWCRRGFLVMCRARPDKVRLQTAKILDPTAAGNQPQQR-------DEGLV--------------------------GLAARLVKLADEDVFRKVVGLL 422
BLAST of mRNA_L-elsbetiae_contig16.4140.1 vs. uniprot
Match: A0A6H5JXY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY4_9PHAE) HSP 1 Score: 157 bits (397), Expect = 1.540e-37 Identity = 85/138 (61.59%), Postives = 107/138 (77.54%), Query Frame = 1 Query: 43 EERASILQGEGAAIFNMVCDRATPKQWAEWLRAPLEHAAGTANADLVDKLLKAGADGSAGWKGCHGKSLLHAGAEGG-DERVVSALMRAGAKEDMDTKAHSK-RRTPLHLAVRGGKVAAAKVLIMAGADVNILDADGE 450 E+RA IL IF ++CDRAT +QWAEWLRAPLEHAAGTAN DLV+KLLKAGA+GSAG +GC +LLHA AEGG +E VV+AL++AGA+ED++ K R TPLH+AV GK AAA+ +++AGADVN D +G+ Sbjct: 11 EDRAKILGDAADMIFELMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGANGSAGRRGCDDNTLLHAAAEGGNEEEVVTALIKAGAEEDIEAKVVGMVRGTPLHVAVATGKEAAARAMMLAGADVNAADRNGD 148
BLAST of mRNA_L-elsbetiae_contig16.4140.1 vs. uniprot
Match: A0A6H5KFY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFY7_9PHAE) HSP 1 Score: 143 bits (361), Expect = 7.150e-34 Identity = 89/184 (48.37%), Postives = 111/184 (60.33%), Query Frame = 1 Query: 922 AKTSNTASSPLHTACAKGKLDAADLLLRWGADETALDKKGKTPSARMPD-IATAVAEDRPKLEHLSKLLACAPQDRAWRRRGMLVLCRAHPDRLRLVVEISDTA-EASGQPQSRSSRRARRDQVKVEVTMGGA--------PNGGAXXXXXXXXXXXX--FDGVAAWLMALTNEDIFRKIVGFL 1437 +K + SPL +AC +G DAADLLLRWGADETA+D KT + M I A R +LE +S+LLA APQDRAWRRRG LV C +HPDR++L VEI + A EA Q Q R R AR QV+V+V M G GA F+G++AW++ALT E +FRKI+GFL Sbjct: 153 SKNTINGLSPLCSACREGHHDAADLLLRWGADETAVDSDEKTIVSMMTHRIFRAAVASRQRLERVSELLARAPQDRAWRRRGFLVPCLSHPDRVQLAVEIPEAATEAIEQTQERPRRHARTGQVEVKVEMDGTNXXXXXXXXKSGAREGTESMREGTDGGFNGLSAWMIALTEEHLFRKIMGFL 336 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16.4140.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16.4140.1 >prot_L-elsbetiae_contig16.4140.1 ID=prot_L-elsbetiae_contig16.4140.1|Name=mRNA_L-elsbetiae_contig16.4140.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=470bp MPQYEERASILQGEGAAIFNMVCDRATPKQWAEWLRAPLEHAAGTANADLback to top mRNA from alignment at L-elsbetiae_contig16:78539..82337+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16.4140.1 ID=mRNA_L-elsbetiae_contig16.4140.1|Name=mRNA_L-elsbetiae_contig16.4140.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3799bp|location=Sequence derived from alignment at L-elsbetiae_contig16:78539..82337+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16:78539..82337+ >mRNA_L-elsbetiae_contig16.4140.1 ID=mRNA_L-elsbetiae_contig16.4140.1|Name=mRNA_L-elsbetiae_contig16.4140.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2820bp|location=Sequence derived from alignment at L-elsbetiae_contig16:78539..82337+ (Laminarionema elsbetiae ELsaHSoW15)back to top |