mRNA_L-elsbetiae_contig16.4138.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16.4138.1 vs. uniprot
Match: D7FM65_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM65_ECTSI) HSP 1 Score: 188 bits (478), Expect = 1.280e-50 Identity = 204/388 (52.58%), Postives = 234/388 (60.31%), Query Frame = 1 Query: 1 MPQYEERASILQGEGAMIFNMVCDRATPKQWAKWLRAPLEHAAGTGNADLVDKLLKAGADGSAGWKGCHGKSLLHAGAKGGDERVVSALMRAGAKEDMDTKAHSKRRAPLHLAALGGKAAAAKVLMMAGADVNILDADGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSNTVSSPLHIGCQEGELDAADLLLRWGADETALDKKARTPSARMPDIATAVAEDRPKLERLSKLLACAAQDRAWRRRSMLVLCRAHPD 1164 M +++R S L G G MI ++VCD ATP+QW KWLR PLEHAAGTGNA LV+KLLK GA+ SAGW+GC G++L+HAGA+GG E+V+S L RAGA + ++ +A PLHLA GGK AA KVLM+AGADVN LDAD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K + + LH C DAADLLLRWGADETA+D T SA +P I A E+ P + RL+KLL A QDR WRRR +LV+CRAHP+ Sbjct: 1 MSTHQDRKSTLHGTGDMILDLVCDLATPRQWTKWLRVPLEHAAGTGNAALVEKLLKVGANASAGWRGCDGRTLMHAGAEGGSEQVISMLTRAGAGKYINDQAPLSGLTPLHLAVSGGKLAATKVLMLAGADVNRLDAD---------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCHALDAGHISTVNVSLGWGCLWLEPTSKTCIAGRPPLCVSTFSISYFAAMLALLKLGADLHAKCPHNGMTALHTACHVVNPDAADLLLRWGADETAVDWNGATTSAVIPRIDEAPEENGPAILRLTKLLKFADQDRTWRRRGLLVMCRAHPE 361
BLAST of mRNA_L-elsbetiae_contig16.4138.1 vs. uniprot
Match: D7G2A3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A3_ECTSI) HSP 1 Score: 184 bits (468), Expect = 4.090e-48 Identity = 95/141 (67.38%), Postives = 110/141 (78.01%), Query Frame = 1 Query: 1 MPQYEERASILQGEGAMIFNMVCDRATPKQWAKWLRAPLEHAAGTGNADLVDKLLKAGADGSAGWKGCHGKSLLHAGAKGGDERVVSALMRAGAKEDMDTKAHSKRRAPLHLAALGGKAAAAKVLMMAGADVNILDADGEG 423 MP YEERASILQ G IF +VCDRATP+QWA+WLRAPLEHAAGTGN DLVDKLL AGA+ AGW+GCHGK+LLHA A+GG+ V+++L RAGA DM K+ PL LA +GGK AAAK L+MAGADVN LDA +G Sbjct: 1 MPGYEERASILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAGRDMKAKSLDTGHTPLDLAVIGGKEAAAKALIMAGADVNTLDATNDG 141
BLAST of mRNA_L-elsbetiae_contig16.4138.1 vs. uniprot
Match: D8LHQ7_ECTSI (F-box domain and ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ7_ECTSI) HSP 1 Score: 175 bits (444), Expect = 2.450e-46 Identity = 91/141 (64.54%), Postives = 108/141 (76.60%), Query Frame = 1 Query: 1 MPQYEERASILQGEGAMIFNMVCDRATPKQWAKWLRAPLEHAAGTGNADLVDKLLKAGADGSAGWKGCHGKSLLHAGAKGGDERVVSALMRAGAKEDMDTKAHSKRRAPLHLAALGGKAAAAKVLMMAGADVNILDADGEG 423 +P YEER+SILQ G F +V DRATP QWA+WLRAPLEHAA TGN DLVDKLL AGA+G AGW+GCHGK+LLHA A+GG+ +V++ L AGA EDM KA PL LA +GGK AAAK L+MAGA+VN+LDA +G Sbjct: 43 IPGYEERSSILQDLGDTTFKLVRDRATPDQWAEWLRAPLEHAAATGNRDLVDKLLGAGANGGAGWRGCHGKTLLHAAAEGGNVQVITRLRNAGAGEDMKAKALDTGHTPLDLAVIGGKEAAAKALIMAGANVNMLDATNDG 183
BLAST of mRNA_L-elsbetiae_contig16.4138.1 vs. uniprot
Match: D7FQP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP1_ECTSI) HSP 1 Score: 164 bits (414), Expect = 3.200e-41 Identity = 86/137 (62.77%), Postives = 105/137 (76.64%), Query Frame = 1 Query: 13 EERASILQGEGAMIFNMVCDRATPKQWAKWLRAPLEHAAGTGNADLVDKLLKAGADGSAGWKGCHGKSLLHAGAKGGDERVVSALMRAGAKEDMDTKAHS-KRRAPLHLAALGGKAAAAKVLMMAGADVNILDADGE 420 E+RA L +IF ++CDRAT +QWA+WLRAPLEHAAGT N DLV+KLLKAGADGSAGW+GC K+LLHA A+GG+E VV+AL+RAGA EDM+ K PLH+A GK AAA+VLM+AGADVN D +G+ Sbjct: 9 EDRAKTLGDAAGIIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALVRAGAGEDMEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGD 145
BLAST of mRNA_L-elsbetiae_contig16.4138.1 vs. uniprot
Match: D7FQP2_ECTSI (Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP2_ECTSI) HSP 1 Score: 152 bits (383), Expect = 9.860e-38 Identity = 78/132 (59.09%), Postives = 96/132 (72.73%), Query Frame = 1 Query: 13 EERASILQGEGAMIFNMVCDRATPKQWAKWLRAPLEHAAGTGNADLVDKLLKAGADGSAGWKGCHGKSLLHAGAKGGDERVVSALMRAGAKEDMDTKAHSKRRAPLHLAALGGKAAAAKVLMMAGADVNILD 408 E+R IL MIF ++CDRAT +QW +WLRAPLEHAAGT N DLV+KLLKAGADGSAGW+GC +LLHA VV+AL+RAGA EDM+ K PLH+A + G+ AAA+VL++AGADVN +D Sbjct: 9 EDRVKILGDAADMIFKLMCDRATSEQWTEWLRAPLEHAAGTANRDLVEKLLKAGADGSAGWRGCDDNTLLHAAXXXXXXXVVTALIRAGAGEDMEAKTPGTGGTPLHVAVMRGQEAAARVLVLAGADVNAVD 140
BLAST of mRNA_L-elsbetiae_contig16.4138.1 vs. uniprot
Match: A0A6H5JXY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY4_9PHAE) HSP 1 Score: 152 bits (385), Expect = 9.060e-37 Identity = 82/138 (59.42%), Postives = 105/138 (76.09%), Query Frame = 1 Query: 13 EERASILQGEGAMIFNMVCDRATPKQWAKWLRAPLEHAAGTGNADLVDKLLKAGADGSAGWKGCHGKSLLHAGAKGG-DERVVSALMRAGAKEDMDTKAHSK-RRAPLHLAALGGKAAAAKVLMMAGADVNILDADGE 420 E+RA IL MIF ++CDRAT +QWA+WLRAPLEHAAGT N DLV+KLLKAGA+GSAG +GC +LLHA A+GG +E VV+AL++AGA+ED++ K R PLH+A GK AAA+ +M+AGADVN D +G+ Sbjct: 11 EDRAKILGDAADMIFELMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGANGSAGRRGCDDNTLLHAAAEGGNEEEVVTALIKAGAEEDIEAKVVGMVRGTPLHVAVATGKEAAARAMMLAGADVNAADRNGD 148
BLAST of mRNA_L-elsbetiae_contig16.4138.1 vs. uniprot
Match: D8LH19_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH19_ECTSI) HSP 1 Score: 139 bits (350), Expect = 7.920e-32 Identity = 71/136 (52.21%), Postives = 91/136 (66.91%), Query Frame = 1 Query: 1 MPQYEERASILQGEGAMIFNMVCDRATPKQWAKWLRAPLEHAAGTGNADLVDKLLKAGADGSAGWKGCHGKSLLHAGAKGGDERVVSALMRAGAKEDMDTKAHSKRRAPLHLAALGGKAAAAKVLMMAGADVNILD 408 M ++ER + L G +F +V ATP QWA+WLRAPLEHA GN L LL+AGADG AGWKGC G+SLL +GG+ + VSAL+ AG+ D++ S RR+PLH A GG A A+VLM+AGA V++LD Sbjct: 1 MANFDERTAALGGTEEQLFKLVSRHATPAQWAEWLRAPLEHAVAEGNQHLASTLLRAGADGGAGWKGCDGRSLLDVAVQGGNSKTVSALLEAGSLGDVNAVTGSDRRSPLHRAIAGGHTAVARVLMLAGAGVSLLD 136
BLAST of mRNA_L-elsbetiae_contig16.4138.1 vs. uniprot
Match: D7FPN3_ECTSI (Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPN3_ECTSI) HSP 1 Score: 137 bits (345), Expect = 1.380e-31 Identity = 67/107 (62.62%), Postives = 82/107 (76.64%), Query Frame = 1 Query: 7 QYEERASILQGEGAMIFNMVCDRATPKQWAKWLRAPLEHAAGTGNADLVDKLLKAGADGSAGWKGCHGKSLLHAGAKGGDERVVSALMRAGAKEDMDTKAHSKRRAP 327 +YE+RA+IL+G F +VCDRATP+QWA+WLRAPLEHAA T + DLV KLL AGA+GS GW GC GK+LLHA A+GG+ +V+ AL+RAGA D DT A K R P Sbjct: 6 RYEDRANILRGSEDTTFRLVCDRATPEQWAEWLRAPLEHAAATADHDLVKKLLNAGANGSTGWVGCDGKTLLHAAAEGGNAQVIMALLRAGAAGDKDTAASYKERTP 112
BLAST of mRNA_L-elsbetiae_contig16.4138.1 vs. uniprot
Match: A0A6H5KB54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB54_9PHAE) HSP 1 Score: 135 bits (340), Expect = 1.130e-30 Identity = 192/389 (49.36%), Postives = 208/389 (53.47%), Query Frame = 1 Query: 133 TGNADLVDKLLKAGADGSAGWKGCHGKSLLHAGAKGGDERVVSALMRAGAKEDMDTKAHSKRRAPLHLAALGGKAAAAKVLMMAGADVNILDADGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSNTVSSPLHIGCQEGELDAADLLLRWGADETALDKKARTPSARMPDIATAVAEDRPKLERLSKLLACAAQDRAWRRRSMLVLCRAHPDRLRLAIEIPDTA-ELSG---QPQGRPRRRARR-DQVKVEVTMGGA 1284 T N +LV KLL+AGADG GW+GCH K+LLHA AKGGD VVS L RAGA+ D + +A PLHLA LGG AA AK L MA ADVN+LDA GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXX ETA+D + TPS +P IA A ED +LERLSKLL A QDRAWRRR L LCRAHPDRLRL +EIP TA E SG Q Q RP RRAR+ Q KV+V + A Sbjct: 21 TANNELVSKLLRAGADGGVGWRGCHDKTLLHAAAKGGDALVVSLLQRAGARADFEAEAPGTGHTPLHLAVLGGNAATAKALTMAEADVNVLDAMNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDIVVALAHKGVDLEGVAEPPLLRAVRQDHISTVRVLLAVGANANNPFSDYDYGTTVLHFAAETDNAVAIPVLIEAGASVQSSDMYDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKETAVDLQGSTPSEFIPAIAEAADEDHRRLERLSKLLTRAPQDRAWRRRGFLALCRAHPDRLRLVVEIPKTADEASGKQPQEQERPSRRARKGQQSKVDVEVDDA 409
BLAST of mRNA_L-elsbetiae_contig16.4138.1 vs. uniprot
Match: D7G292_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G292_ECTSI) HSP 1 Score: 134 bits (337), Expect = 2.120e-30 Identity = 192/369 (52.03%), Postives = 214/369 (57.99%), Query Frame = 1 Query: 133 TGNADLVDKLLKAGADGSAGWKGCHGKSLLHAGAKGGDERVVSALMRAGAKEDMDTKAHSKRRAPLHLAALGGKAAAAKVLMMAGADVNILDADGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSNTVSSPLHIGCQEGELDAADLLLRWGADETALDKKARTP-SARMPDIATAVAEDRPKLERLSKLLACAAQDRAWRRRSMLVLCRAHPDRLRLAIEIP-DTAELSGQPQGRPR 1233 TGN DLVDKLL AGA+G AGW+GC GK+LLHA A+GG+ V++ L RAGA DM K PL LA +GGKAAAA+ L+MAGADVN+LD+ +GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX C DAADLLLRWGADETA++ + T S + IA A+ P LER+SKLLA A QDRAWRRR LVLCRAH DR+RLA+EIP AE + PQ RPR Sbjct: 48 TGNRDLVDKLLGAGANGGAGWRGCDGKTLLHAAAEGGNVPVIARLRRAGAGGDMKAKTLDTGHTPLDLAVVGGKAAAAEALIMAGADVNVLDSKNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEKGIDLNCLNYKRGTPLHVAKIRSAPEQRAAIRALFEAGADIEGPGIRGRTPLRHAARSGSYAAIXXXXXXXXXXXXXXXXXXXXXXC------------------------------ACFFCHHDAADLLLRWGADETAVNLEGETVVSMVIRRIAEALETRCPPLERVSKLLARAPQDRAWRRRGFLVLCRAHRDRVRLAVEIPVAAAEATEGPQQRPR 386 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16.4138.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16.4138.1 >prot_L-elsbetiae_contig16.4138.1 ID=prot_L-elsbetiae_contig16.4138.1|Name=mRNA_L-elsbetiae_contig16.4138.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=466bp MPQYEERASILQGEGAMIFNMVCDRATPKQWAKWLRAPLEHAAGTGNADLback to top mRNA from alignment at L-elsbetiae_contig16:66627..68761- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16.4138.1 ID=mRNA_L-elsbetiae_contig16.4138.1|Name=mRNA_L-elsbetiae_contig16.4138.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2135bp|location=Sequence derived from alignment at L-elsbetiae_contig16:66627..68761- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16:66627..68761- >mRNA_L-elsbetiae_contig16.4138.1 ID=mRNA_L-elsbetiae_contig16.4138.1|Name=mRNA_L-elsbetiae_contig16.4138.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2796bp|location=Sequence derived from alignment at L-elsbetiae_contig16:66627..68761- (Laminarionema elsbetiae ELsaHSoW15)back to top |