mRNA_L-elsbetiae_contig16.4133.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig16.4133.1
Unique NamemRNA_L-elsbetiae_contig16.4133.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig16.4133.1 vs. uniprot
Match: D8LKM8_ECTSI (TAZ-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM8_ECTSI)

HSP 1 Score: 454 bits (1169), Expect = 4.980e-152
Identity = 314/494 (63.56%), Postives = 345/494 (69.84%), Query Frame = 1 
Query:    1 QQLDLLIERSFGDLQFLVDEFSKLEVLLAPESKE----GESAVDPKLVKLRFFISHVRRTMGRMRDARSGRDPLSAPQLALLEEHIATSIAPEGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEWSVGLELSSEMFGAGGSVSLGLVSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPVAPAASIGSSFSRLCWSGXXXXXXXXL----DLLGGGRTPLEQNRTRRDHLDMLSQLEAEGVFAADDSYSPCG-----RDPGILGGVAFSPSSTLPTALLQPREVRYQCGACSQSYAATVTGNPWWLLVRQECPACHKMQIPRVDILNPTNNVERHIAFLTEACAETGSDGDSSFMDWDGDTSDDNSGDEYSGDEVTLAGGDGXXXXXXXXXXXXXXXLGASLDSEQAAKLLVLMCHARDCPGNHRSARLAEVCRSVKFXXXXXXXXXXXTRAGQPCPFPWCQPCTSLLHHLIQCPESAGCQ 1443
            ++LDLL+++SFGDLQFL DEF+KLEV++AP  +E    G++  D KL +LRFF +HVRRTM RMRDARSGRDP+S  QLALLEEHIATSIAP   GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+EWSVGLEL  E FG+GGSVSLGLVSP                                 + + PA+S  SS SRLCW       XXX     D+  GGR       TRRDH+DMLSQLEAEGVFAADDSYSPCG          +GGVAFSP         +PREVRYQCGAC+ SYAATV+GNPWWLLVRQECP CHKMQIPRVDILNPTNNVE HIAFLTE      SDGD S MDWDG+TSD+NS                  XXXXXXXXXX   LG +LDS+QAAKLLVLMCHAR CPGNHRSARLAEVCRSVKF           TR G PCP PWC+PC SLLHHLIQCPES GC+
Sbjct:   63 RRLDLLMDKSFGDLQFLSDEFAKLEVVVAPAVQERDDSGKAGTDSKLGRLRFFTTHVRRTMARMRDARSGRDPMSMSQLALLEEHIATSIAP---GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEWSVGLELHDEAFGSGGSVSLGLVSPAPASVPDRGADGGIYDPHACS------------ARLTPASS-SSSLSRLCWGSGGGTGXXXXXXXRDVARGGRP---HRHTRRDHVDMLSQLEAEGVFAADDSYSPCGGXXXXXXXXXMGGVAFSP---------EPREVRYQCGACAASYAATVSGNPWWLLVRQECPICHKMQIPRVDILNPTNNVESHIAFLTE----NASDGDGSCMDWDGETSDENSXXXXXXXXXXXX------XXXXXXXXXXGSGLGPTLDSDQAAKLLVLMCHARHCPGNHRSARLAEVCRSVKFLMLHLRDCDGKTRNGDPCPMPWCEPCMSLLHHLIQCPESTGCK 518
[Close]
BLAST of mRNA_L-elsbetiae_contig16.4133.1 vs. uniprot
Match: A0A6H5KT72_9PHAE (TAZ-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT72_9PHAE)

HSP 1 Score: 247 bits (630), Expect = 3.730e-70
Identity = 143/207 (69.08%), Postives = 150/207 (72.46%), Query Frame = 1 
Query:  913 WLLVRQECPACHKMQIPRVDILNPTNNVERHIAFLTEACAETGSDGDSSFMDWDGDTSDDNSGDEYSGDEVTLAGGDGXXXXXXXXXXXXXXXLGASLDSEQAAKLLVLMCHARDCPGNHRSARLAEVCRSVKFXXXXXXXXXXXTRAGQPCPFPWCQPCTSLLHHLIQCPESAGCQVCNPLHLPSPLRDLRALNHSSSRAPSAAQP 1533
            WLLVRQECP CHKMQIPRVDILNPTNNVE HIAFLTE      SDGD S MDWDG+TSDDNS                  XXXXXXXXXX   LG  LDS+QAAKLLVLMCHAR CPGNHRSARLAEVCRSVKF           TR G PCP PWC+PCTSLLHHLIQCPES GC+VC+P HLP PL+ LRALN SSS   + AQP
Sbjct:  477 WLLVRQECPTCHKMQIPRVDILNPTNNVESHIAFLTE----NASDGDGSCMDWDGETSDDNSXXXXXXXXXXXX------XXXXXXXXXXGSGLGTILDSDQAAKLLVLMCHARHCPGNHRSARLAEVCRSVKFLMLHLRDCDGKTRNGDPCPMPWCEPCTSLLHHLIQCPESTGCKVCDPEHLPPPLQQLRALNRSSSTL-ATAQP 672
[Close]
BLAST of mRNA_L-elsbetiae_contig16.4133.1 vs. uniprot
Match: A0A7S1TU47_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU47_9STRA)

HSP 1 Score: 158 bits (400), Expect = 1.210e-41
Identity = 90/240 (37.50%), Postives = 127/240 (52.92%), Query Frame = 1 
Query:  808 PSSTLPTALLQPREVRYQCGACSQSYAATVTGNPWWLLVRQECPACHKMQIPRVDILNPTNNVERHIAFLTEACAETGSDGDSSFMDWDGDTSDDNSGDEYSGDEVTLAGGDGXXXXXXXXXXXXXXXLGASLDSEQAAKLLVLMCHARDCPGNHRSARLAEVCRSVKFXXXXXXXXXXXTRAGQPCPFPWCQPCTSLLHHLIQCPESAGCQVCNPLHLPSPLRDLRALNHSSSRAPSAA 1527
            P+  +P  LL PREV+YQC  C+++Y  T   NPWW L  +EC  C K Q+PR+DI +PTN ++   A    A A   +    +  D D D S D   D    DE  ++                          E+++KLL+L+CHAR CPG HRS R AEVC+S+K+              GQPCPF WC+PC +LL HL++C +   C +CNP +LP  L++L+ LN    +  ++A
Sbjct:   21 PAENVPFNLL-PREVKYQCAVCNEAYTVTFNYNPWWALRLEECMHCKKRQVPRLDISHPTNQIDYLPALSAVAEAMQLN---QAQEDKDNDISTDTESD--MNDEFNMS-------------------------PEKSSKLLILICHARTCPGKHRSRRHAEVCKSIKYLMLHIRDCSGRLPDGQPCPFEWCRPCKNLLSHLVKCFDPNTCAICNPWNLPRSLQELKTLNQLREQVTASA 229
[Close]
BLAST of mRNA_L-elsbetiae_contig16.4133.1 vs. uniprot
Match: A0A7R9YGR4_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YGR4_9STRA)

HSP 1 Score: 160 bits (406), Expect = 4.590e-40
Identity = 97/260 (37.31%), Postives = 134/260 (51.54%), Query Frame = 1 
Query:  727 AEGVFAADDSYSPCGRDPGILGGVAFSPSSTLPTALLQPREVRYQCGACSQSYAATVTGNPWWLLVRQECPACHKMQIPRVDILNPTNNVERHIAFLTEACAET---GSDGDSSFMDWDGDTSDDNSGDEYSGDEVTLAGGDGXXXXXXXXXXXXXXXLGASLDSEQAAKLLVLMCHARDCPGNHRSARLAEVCRSVKFXXXXXXXXXXXTRAGQPCPFPWCQPCTSLLHHLIQCPESAGCQVCNPLHLPSPLRDLRALN 1497
            AE   AA DS    G+D       A   S  +P  LL PREV+YQC  C++ Y+ T   NPWW L  +ECP C+K Q+PR+DI +PTN ++ H A    A A +    +DG  + ++ D ++   +  DE+S                              L  ++++KLL+L+CHAR CPG HRS R AEVC+S+K+              GQ CPF WC+PC  LL HL++C E   C +CNP +LP  +  L  LN
Sbjct:  242 AEQPSAAADSM---GKD-----SKAKEESKNVPFNLL-PREVKYQCAECNEPYSVTFNYNPWWALRLEECPHCNKRQVPRLDISHPTNQIDYHPALSAVAEAMSLSQANDGKDNEINTDTES---DLNDEFS------------------------------LSPDKSSKLLILICHARTCPGKHRSKRHAEVCKSIKYLMLHIRDCSGRLPDGQSCPFEWCRPCKKLLSHLVKCFEPNTCAICNPFNLPRSMEQLMTLN 459
[Close]
BLAST of mRNA_L-elsbetiae_contig16.4133.1 vs. uniprot
Match: D7FUA8_ECTSI (TAZ-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA8_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 1.120e-39
Identity = 110/259 (42.47%), Postives = 141/259 (54.44%), Query Frame = 1 
Query:  784 ILGGVAFSPSS-------TLPTALLQPREVRYQCGACSQSYAATVTGNPWWLLVRQECPACHKMQIPRVDILNPTNNVERHIAFLTEACAETGSDGDS------SFMDWDGDTSDDNSGDEYSGD---EVTLAGGDGXXXXXXXXXXXXXXXLGASLDSEQAAKLLVLMCHARDCPGNHRSARLAEVCRSVKFXXXXXXXXXXXTRAGQPCPFPWCQPCTSLLHHLIQCPESAGCQVCNPLHLPSPLRDLRALNHSSSR 1512
            ++ G+ F  SS       +L   L  PR V Y+C  C +SY + +  NPWW L   ECP CH+MQIPRVD  +   +V+    ++   CAE G   DS      S  D D D +DD  G E  G    +  +  GD                    L + QA++LLVLM HAR CPG+H + + AEVCRS KF XXXXXXXXXX   G PC   WC+PC SLL HL++CP+   C++C PL LP PLR LR LN + +R
Sbjct:  437 MVTGLPFHQSSRQRKRQRSLAPVLSAPRTVSYECSLCKESYPSEIASNPWWSLFLHECPRCHRMQIPRVDATSAAVSVD----YIHAVCAEEGEGCDSDGYGSESCSDSDDDVTDD--GREREGIAAFDTDIIAGDSQAGCKE-----------GRLSTFQASRLLVLMSHARTCPGHHANPKHAEVCRSTKFLXXXXXXXXXXXXNGDPCEHRWCRPCKSLLSHLVRCPDPNTCRICTPLDLPGPLRQLRDLNVAQAR 678
[Close]
BLAST of mRNA_L-elsbetiae_contig16.4133.1 vs. uniprot
Match: A0A6H5KVY2_9PHAE (TAZ-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVY2_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 2.780e-38
Identity = 94/257 (36.58%), Postives = 127/257 (49.42%), Query Frame = 1 
Query:  784 ILGGVAFSPSS-------TLPTALLQPREVRYQCGACSQSYAATVTGNPWWLLVRQECPACHKMQIPRVDILNPTNNVERHIAFLTEACAETGSDGDSS-------FMDWDGDTSDDNSGDEYSGDEVTLAGGDGXXXXXXXXXXXXXXXLGASLDSEQAAKLLVLMCHARDCPGNHRSARLAEVCRSVKFXXXXXXXXXXXTRAGQPCPFPWCQPCTSLLHHLIQCPESAGCQVCNPLHLPSPLRDLRALNHSSSR 1512
            ++ G+ F  SS       +L   L  PR V Y+C  C +SY++ +  NPWW L   ECP CH+MQIPRVD  +   +V+    ++   CAE G   DS                 DD   +  +  +  +  GD                    L + QA++LLVLM HAR CPG H + + AEVC+S KF           T +G PC   WC+PC SLL HLI+CP+   C++C PL LP PLR LR LN + +R
Sbjct:  652 MVTGLPFHQSSRQRKRQRSLAPVLSAPRTVSYECSLCKESYSSEIASNPWWSLFLHECPRCHRMQIPRVDAASAAVSVD----YIHAVCAEEGEGCDSDGXXXXXXXXXXXXXXXDDREREGIAAFDTDIIAGDSQAGCKE-----------GRLSTFQASRLLVLMSHARTCPGRHANPKHAEVCQSTKFLMLHMRDCTGHTASGDPCEHRWCRPCKSLLSHLIRCPDPNTCRICTPLDLPGPLRQLRDLNVAQAR 893
[Close]
BLAST of mRNA_L-elsbetiae_contig16.4133.1 vs. uniprot
Match: A0A7S2C9V7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C9V7_9STRA)

HSP 1 Score: 102 bits (253), Expect = 4.230e-22
Identity = 47/98 (47.96%), Postives = 62/98 (63.27%), Query Frame = 1 
Query: 1216 QAAKLLVLMCHARDCPGNHRSARLAEVCRSVKFXXXXXXXXXXXTRAGQPCPFPWCQPCTSLLHHLIQCPESAGCQVCNPLHLPSPLRDLRALNHSSS 1509
            QA+KLLVL+ HAR CPG+H S R +EVC+SVK+           T  G  C FPWC+PC +LL HL++C +   C +C+P  LP  LR LR LN  ++
Sbjct:   27 QASKLLVLITHARTCPGHHMSHRHSEVCKSVKYLMLHIRDCCGKTSDGTECSFPWCKPCKALLAHLVRCNKPDSCDICSPYDLPPALRKLRQLNQKAA 124
[Close]
BLAST of mRNA_L-elsbetiae_contig16.4133.1 vs. uniprot
Match: A0A835YXC4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXC4_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 2.430e-17
Identity = 68/177 (38.42%), Postives = 83/177 (46.89%), Query Frame = 1 
Query:  790 GGVAFS--PSSTLPTALLQPREVRYQCGACSQSYAATVTGNPWWLLVRQECPACHKMQIPRVDILNPTNNVERHIAFLTEACAETGSDGDSSFMDWDGDTSDDNSGDEYSGDEVTLAGGDGXXXXXXXXXXXXXXXLGASLDSEQAAKLLVLMCHARDCPGNHRSARLAEVCRSVKF 1314
            GGV     P S+L   L + REV Y+C  C + YAAT++ NPWW LV            PR+DI  P N ++   A +  ACA+          D +GDT        YS +        G                GA L + QAAKLLVLM HAR+CPG H   R AEVCRS KF
Sbjct:  190 GGVRVRKRPRSSLMPVLTKEREVWYECALCKEHYAATISCNPWWALV------------PRIDIALPVNGIDH--AQVLSACADD--------SDMEGDTDG-----GYSSEXXXXXXELGE---------------GAQLQAAQAAKLLVLMGHARECPGKHADPRHAEVCRSTKF 324
[Close]
BLAST of mRNA_L-elsbetiae_contig16.4133.1 vs. uniprot
Match: A0A7S3XNY0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNY0_HETAK)

HSP 1 Score: 81.3 bits (199), Expect = 2.260e-14
Identity = 45/105 (42.86%), Postives = 53/105 (50.48%), Query Frame = 1 
Query: 1204 LDSEQAAKLLVLMCHARDCPGNHRSARLAEVCRSVKFXXXXXXXXXXXTRAG-------QPCPFPWCQPCTSLLHHLIQCPESAGCQVCNPLHLPSPLRDLRALN 1497
            L  +QAAKLL+L+ HAR C G HRS +  EVC S K               G       Q C   WC+PC +LL HL QC +   C +CNP  LP  LR LR  N
Sbjct:   19 LAEDQAAKLLILIGHARRCAGRHRSRQHREVCHSTKHLMLHLRDCPLDDGPGXXXXXXXQRCGNLWCRPCKALLRHLAQCRDRLACNICNPKDLPESLRGLRDQN 123
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16.4133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LKM8_ECTSI4.980e-15263.56TAZ-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KT72_9PHAE3.730e-7069.08TAZ-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S1TU47_9STRA1.210e-4137.50Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9YGR4_9STRA4.590e-4037.31Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
D7FUA8_ECTSI1.120e-3942.47TAZ-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KVY2_9PHAE2.780e-3836.58TAZ-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S2C9V7_9STRA4.230e-2247.96Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A835YXC4_9STRA2.430e-1738.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XNY0_HETAK2.260e-1442.86Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16contigL-elsbetiae_contig16:13258..23755 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score459.9
Seed ortholog evalue1.6e-126
Seed eggNOG ortholog2880.D8LKM8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.TAZ zinc finger
EggNOG OGs2BJCE@1,2S1FW@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons10
Model size1560
Cds size1560
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16.4133.1prot_L-elsbetiae_contig16.4133.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig16 13258..23755 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815658.904277-CDS-L-elsbetiae_contig16:13257..133741622815658.904277-CDS-L-elsbetiae_contig16:13257..13374Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16 13258..13374 -
1691683019.9595087-CDS-L-elsbetiae_contig16:13257..133741691683019.9595087-CDS-L-elsbetiae_contig16:13257..13374Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16 13258..13374 -
1622815658.916295-CDS-L-elsbetiae_contig16:14452..146021622815658.916295-CDS-L-elsbetiae_contig16:14452..14602Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16 14453..14602 -
1691683019.9712489-CDS-L-elsbetiae_contig16:14452..146021691683019.9712489-CDS-L-elsbetiae_contig16:14452..14602Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16 14453..14602 -
1622815658.9317183-CDS-L-elsbetiae_contig16:15997..161641622815658.9317183-CDS-L-elsbetiae_contig16:15997..16164Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16 15998..16164 -
1691683019.9827638-CDS-L-elsbetiae_contig16:15997..161641691683019.9827638-CDS-L-elsbetiae_contig16:15997..16164Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16 15998..16164 -
1622815658.9414268-CDS-L-elsbetiae_contig16:16947..170381622815658.9414268-CDS-L-elsbetiae_contig16:16947..17038Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16 16948..17038 -
1691683019.9923925-CDS-L-elsbetiae_contig16:16947..170381691683019.9923925-CDS-L-elsbetiae_contig16:16947..17038Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16 16948..17038 -
1622815658.9509373-CDS-L-elsbetiae_contig16:19299..194231622815658.9509373-CDS-L-elsbetiae_contig16:19299..19423Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16 19300..19423 -
1691683020.0019004-CDS-L-elsbetiae_contig16:19299..194231691683020.0019004-CDS-L-elsbetiae_contig16:19299..19423Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16 19300..19423 -
1622815658.9632115-CDS-L-elsbetiae_contig16:20549..206511622815658.9632115-CDS-L-elsbetiae_contig16:20549..20651Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16 20550..20651 -
1691683020.0117075-CDS-L-elsbetiae_contig16:20549..206511691683020.0117075-CDS-L-elsbetiae_contig16:20549..20651Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16 20550..20651 -
1622815658.9730628-CDS-L-elsbetiae_contig16:21560..220411622815658.9730628-CDS-L-elsbetiae_contig16:21560..22041Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16 21561..22041 -
1691683020.021065-CDS-L-elsbetiae_contig16:21560..220411691683020.021065-CDS-L-elsbetiae_contig16:21560..22041Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16 21561..22041 -
1622815658.9890652-CDS-L-elsbetiae_contig16:22101..221651622815658.9890652-CDS-L-elsbetiae_contig16:22101..22165Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16 22102..22165 -
1691683020.030612-CDS-L-elsbetiae_contig16:22101..221651691683020.030612-CDS-L-elsbetiae_contig16:22101..22165Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16 22102..22165 -
1622815659.0012538-CDS-L-elsbetiae_contig16:22375..225281622815659.0012538-CDS-L-elsbetiae_contig16:22375..22528Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16 22376..22528 -
1691683020.0400577-CDS-L-elsbetiae_contig16:22375..225281691683020.0400577-CDS-L-elsbetiae_contig16:22375..22528Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16 22376..22528 -
1622815659.0169065-CDS-L-elsbetiae_contig16:23644..237551622815659.0169065-CDS-L-elsbetiae_contig16:23644..23755Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16 23645..23755 -
1691683020.0494838-CDS-L-elsbetiae_contig16:23644..237551691683020.0494838-CDS-L-elsbetiae_contig16:23644..23755Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16 23645..23755 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig16.4133.1

>prot_L-elsbetiae_contig16.4133.1 ID=prot_L-elsbetiae_contig16.4133.1|Name=mRNA_L-elsbetiae_contig16.4133.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=520bp
QQLDLLIERSFGDLQFLVDEFSKLEVLLAPESKEGESAVDPKLVKLRFFI
SHVRRTMGRMRDARSGRDPLSAPQLALLEEHIATSIAPEGEGGGGHSTSR
SSSMSSGMGGAGGGGGALVGGDQEEEDEWSVGLELSSEMFGAGGSVSLGL
VSPAPATSAAASRGGHDSSSFSSCSCSSSSSSSCRCSPVAPAASIGSSFS
RLCWSGGGGGGGGGLDLLGGGRTPLEQNRTRRDHLDMLSQLEAEGVFAAD
DSYSPCGRDPGILGGVAFSPSSTLPTALLQPREVRYQCGACSQSYAATVT
GNPWWLLVRQECPACHKMQIPRVDILNPTNNVERHIAFLTEACAETGSDG
DSSFMDWDGDTSDDNSGDEYSGDEVTLAGGDGGGSGGGGGGGGRNGGLGA
SLDSEQAAKLLVLMCHARDCPGNHRSARLAEVCRSVKFLMLHLRDCDGRT
RAGQPCPFPWCQPCTSLLHHLIQCPESAGCQVCNPLHLPSPLRDLRALNH
SSSRAPSAAQPTPPPPPSPQ
back to top

mRNA from alignment at L-elsbetiae_contig16:13258..23755-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig16.4133.1 ID=mRNA_L-elsbetiae_contig16.4133.1|Name=mRNA_L-elsbetiae_contig16.4133.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10498bp|location=Sequence derived from alignment at L-elsbetiae_contig16:13258..23755- (Laminarionema elsbetiae ELsaHSoW15)
CAGCAGCTAGATCTCCTGATAGAGAGATCCTTCGGCGATCTGCAGTTCCT
CGTGGATGAGTTTTCCAAGTTGGAGGTGCTATTGGCGCCGGAATCCAAAG
AGGGTGAGTCAGTCATCACGCCGCTCAATTCGGTCGTCCCTCTCTCTCCC
CTCTGTCTCTGCTGGTATATATATATATATGCATGTAAATATACACAATT
ACATAGCCGCGACGGTCTAACGCGACTTGCCCGCAGGGGCTGATCCGCAC
TAAAAAAGGACTCATCTATCTGCGAAACGTTCTGTTCACCTCGCTCCTAT
GCTGATGGCACGTGTGCTGGGTGGGCTCCCTCCGTCCGCCGTCTGTCCAC
GAGGAACTGCCCGCCGGCCCGGCCCCCCTCGCAAACTCTCTTTACCGTTC
TTTTACTTGTGTGTCGTACATATTCCTTGGGCGCCCCTTCCAACTACACA
GCAGATGGCTATGTATCAACCGCGCGCAAGTCTAAATTAACGCAGAGAAG
GGACAGCAGTAGTCACAACAGCCAAGCCGTTTGAAGATCTGCTGTTCTTG
CTTGTAGAGCGAAGTACGGTCGTACTTGCGACTTCGATTCTTCTTCTTCC
ACGTTCGCCCCGTACACATGTACGTCGGGTCCTCCCCCCCCCCCCCCCCC
TGTGTCGTGGCATTTGAGCTGCCAGAGAGGGGCCGGGACCGTCAGTCAAT
CAGTCAGCCCTCGTGGTAGAGGCCGAGCACGCACAGTGCACACACGCGCA
TTGTGAACGAAACAGCAGTAGTAGCCGAACGCCGGAGTATTCCTCTTGAG
CATTGCTGCCGTGTACCAGTACAGCGCAAAAAGCAGCCGCCAGTGCAGCC
TTGTCTGCCTCGTTTCCGCGCGTGTCGTTCGGTCCAAAAGCGCTTGACAC
ACCCGCACGCAAAGCTTAGCTCTCCGCTCGACCGTCTGCCTCACCTCGTG
CCTCGCTCTTTTTTTTGTGTTCTCCCCATGTGCTTTCTCTCGGTCTGTCT
CTCTGTCTGTCTTGTCTGTGTGTCTGTCTGTCTGTCTGTCTCTTTTCTCT
CTCTTTCCCTGTCTCCCTGATCCGCATCTTGTCCTTTGTGCGTAACATGC
GGACTGCTGTGTACGTCCTCCGTCCGTTCTTGGGAACTGCTCTTTCTTGG
CACGATGCATTTACACACCTATGTACGTAGCCGCGCATCCAGCGCTAGGC
GGCGGCGGGGCGGCGGCGGTGGCAGAGGCGGTGGACCCGAAGCTGGTCAA
GCTCCGCTTTTTCATCAGTCACGTGCGTCGAACGATGGGTCGAATGCGGG
ACGCGAGGAGCGGCCGCGACCCGCTGTCGGCGCCCCAGCTGGCGCTCCTG
GAGGAGCACATCGCGACGTCCATCGCCCCGGTCAAGGAGCGCCTCGTGGG
CCAGATGGATCGTGCCTGCGGCGGAAACGGCAGCGGCAGCCTGGCGGCTC
TGACGCTGAGCGCGAGCACGACCGCGACCGTGACCGCGGCCACGGCTGCG
GCTACCGCCGCCGCCCGCGGCCGCAGCGGCAGCACCAGCAGCGGCAGCGG
CGGCACGCGGCACGAGGTGAGCGCGACGGACGACGGGGAGGAAGGGGAAG
GGGGAGGGGGGCACTCCACGTCGAGGAGCTCGTCGATGTCGAGCGGCATG
GGCGGTGGCTTCGGCGGCGAGAGCCTGTCTTCGCAGGACGGGGGGGCGGG
CCAGGCCGAGGCAGGGGCGGGGGGGGGGGGGGGAGCGCTGGTAGGCGGGG
ACCAGGAGGAAGAGGACGAGTGGTCGGTGGGGCTGGAGCTGAGCAGCGAG
ATGTTCGGCGCCGGCGGGAGTGTTTCTCTCGGCCTGGTGTCGCCGGCGCC
GGCGACGAGTGCGGCCGCGAGCAGGGGTGGTCACGACTCCTCCTCCTTCT
CCTCCTGCTCCTGCTCCTCCTCTTCCTCCTCCTCCTGCCGCTGTTCACCC
GTGGCACCTGCGGCCAGCATCGGCTCGTCGTTTTCGCGCCTGTGCTGGAG
TGGCGGCGGCGGCGGCGGCGGAGGAGGTCTAGACCTGCTGGGCGGGGGCA
GGACTCCGCTGGAGCAGAACCGAACCCGGCGAGATCACCTGGACATGCTG
AGCCAGCTCGAGGCGGAGGGGGTCTTCGCCGCAGATGACAGCTACTCGCC
CTGCGGTCGCGACCCCGGGATTCTCGGCGGCGTCGCCTTCTCGCCGTTCG
TGGTCCACGGCGGCGCGGGGAAAAGATCGTCGTCCGCATCAGCATCATCA
CCACCACCGTCGACGGCGAAGGCAACGGCGATGATCGATGTGTGCGGGGA
TCTGAGCCCTTTCCCTCTGAGAGAGGTGAAGAGAGAGCACAGCAGGGATG
GGGAAGGGGATGGGAGGAGAAGCGCCCCGCGTAACAAGGCGGCACCGCTG
CTGCTGCCGATGCCGCTGAAGACCTTGGTGAAGCAAGAGTTTTCCAGGGG
GGGGGGGGGGGGGGGCGTTGTTACCGGAGCCAGCGTCGGGGCGTTGGTGC
CTGCATTGCCTGAGGCGCCAGCAGCGACGCCGGTTGGTTCAGGTGCTACA
GCAGTCCCGCCCGGGAAAGCGACGTTGGCTTCAAGGCCGCCGGCGGTGGC
GGCGGCGGTGGCGGCGGCTCCGTCTGGTGTTGTTTTAGGTAGTGCGTCGT
TTCAGTCGGCGGCAGCGGCGGCGTCAAGTTCGGTTCCTTGTCGCCAGGGT
CTTTCATCCACTACGGCTTTCGTCCGGCCAAAGTGCGAGGCTGCGGCTGC
GGCAGCTCCCACGCGCACGGCAGCCAGTCCTATCTCGCATGCCACGGCAG
GCGAAGCAAGAGCGGCAAAATCTGCTGCGGCGGCGGCAGCCGAGGAGAGT
GCGCCGACCGCCACCGTTTTCCCCGCGGGCGGTTCCTCAACGACGGCGGC
GGCGGCGATGGCAGCTCTCCGATCGGTCGTGGCGCCAGGAGCAGCGAGTG
TGGCGGCGGCGGCGGCGGGGGACACCGCTGCCACGACGGAAGCGGCGCCG
GTGGCCGTTGCTCCGTCCGGCAGACCGCTGCCGTCGGCAGGGGGCGGGCA
CAGGGGAGGGGGGAGCATGCTGCTGGTGCCTCCACGGCCGGCGAAGCGGC
GAAGGTCGTCCACCTTGCCGACGGCGCTGCTGCAACCTCGCGAGGTCCGG
TACCAGTGCGGGGCGTGCAGCCAGAGCTACGCGGCGACGGTGACCGGCAA
CCCTTGGTACGTTGGCGCAGCATTTATTTTGACTCCCATGCATTCCTCTC
TCTTGTCGTACATAGTTCATATGTACGTGAGCCTCATATGGGAATACGGT
AGATACGGAGAAAGGCCTGGGAAACTCGAGCCTGCCCTCGGAGCTATTAA
TTTTATTACTACTATCTTTAATATGCGTGCCCCTGGCATGACTATGGATA
GGCTACCTCTCTTCGTTTGGTCTGTTCTGATAACAGCTTTTTTACTTTTA
TTGTCTCTTCCGGTTTTAGCTGGTGGTATTACAATGCTTTTAACTGATGG
AGATTTCAATACAACTTTCGTTTTTGATTGATGGTGGTGGAAACGCTCTC
GTGCCGGCGGGTTGCGACGAAAGCCGTTCGAGAGGAAACCACCCCCCCCC
TCTTCTCCGAGAAATGTCGGCCACTTTTCCGTTCATTTTTGGTCCGGGTT
TGGCTTGCAGCCGGTTAAAACGGAGATTCCATGGGCATGTGCAGAATCGT
AGAACCCCGTTCTGTTTTCGTTCGTTACCGTTCCGTTCGTCGGTGCATAC
ATGCCTGCGTGGGTTCGAAATCACGAAACAACAAAAAAGCCTAACCTGGA
ATACATGAGTTGGTTGACCAGGCAGAAGAACTCTGCAGGGGAGATGTTGA
ATTATTCGGACTTTTTAGGTGTTTTTCTACCCGGATGGACTAATTATATT
ACGTCACTTTACAAGATCCCCCCTCGGAGCGAGCTCAAAACGTCACTATG
TGGAATACCGGTTGAACCCCGCGGAGTCCCCGTCTCAAATGTGGGCTATA
CATGGGTTCGTTCTTGATTGTCTGACTTATCTTTCGAAAAGGACGTGGAC
GTGTTTGTTTGTTTTTGTTTTTAGTGGTGCGCGCAACGTCTGTGCCCCTT
CCCCCTGGCGCCGGGTATTGCAGATCCGAAACGCTCCCTCACGCGGCCAC
GCGGCGCGAACATATGTGCAGTCGGCCGCGCCGGCGAAGGTTTACAGGGG
GTGAGATATGTGGATGGGAACCCGTTGTTCTCCGCGTTGTTTGACGCCCC
CTTTCGCTCCGAACCTCTTGCCTTGCCTTGCCTTGCCTTGCCTTGCCTTG
CGCCGCATTACACTGCATTGCATTGCCTCTAGGTGGTTGCTGGTGAGGCA
GGAGTGCCCGGCGTGCCACAAGATGCAGATCCCTCGCGTCGACATCTTGA
ATCCCACCAACAACGTGGAGCGCCACATCGCCTTCCTTACGGAGGCGTGC
GCAGAGGTATGCACTGTTTACCACTGCTGTTGCACATACAGCTGTGTGGC
ACATTATTGGTGCTTTTTAATTAACGTATACAAATGTCAGCAGTCTCACG
TCTAGTCTGCGAAAAAGTCGTTCCAGAGGGAGCTGTCTGTTTGTGCGTTT
TGTTTGTTTCGGCCGACTGCGTGAGTTTTCCGTGCGGTCTGCTCGCCTGC
TCGGTACGCGGCATACTCTTTTACATGCAAGTACATGTCAACTTCAAGTA
CATAAAAGGTGTGGCCGCTGACGCGGCCCCGCTTTTATTAAAGCGATTCC
AAGGCAATGATAAGTATTTACTCTATCCTTGACGTGCTGCTGTTGTGGAA
CAGACAACAACAGCAGGGTCACAAGCAGGGTGTACATTTCAAAAACACAA
AAACATCAGTCAAGTTGCTGCAGTTGCTTTTTTAACATACAGTACTTCCG
AAAAACACCTTTCATCAGGATGCTATGTTAATGCCTAGATCTATGTAGAA
GTAGATTATTTTTCCATGGAGGAACTGCCCTCCCCCTGGTTGAGACGGCG
CTGCCGCGAGTGTGCCCGTGTATACGCTACACGTCTGCACGTAAAGTGCT
TCGCAGGAGTAGATTTCGGCTCGCGCATCGCCGTTACCAGTTCGTTATGT
ACGTAAACAAATCTAGAGTCAAATTCCCAAAAATGAATCCACAATCATGT
GATACATCGCGATAAAAATGAAAAGAAAGAAAGAAAAAGCCCCAGTGTTC
ACCCCCCCCTGTGTGACGACCCCGGTTGGTTCTAGTTGTGCAGACAAATG
CACTGCAAAGTGTAGTACCTCTAGGTGTACACGTCTCCACTTGGGGGACT
GTCGCCAAAATAAATGGGAAGGACACACACACACACAGCAGTTGGGCGTG
ACGGACAGATAGATAGACTGAGGCTTAGCCGCGAGTGTACCCGTGTGCAC
AACAAAACATATTATATGTGTACAGAGTGCGTCCCTGGGTACGTGGGTAC
GTCGGAGCGCTCAGGAGGGCAATGACACCAACAAACCGGCTCGCTCGCGT
GTTGACTCTTTTTTTGGACGGACCCTTTGGGGCGAGAGTCAAATTTCCAA
AAAAAAAAAGCTACTGCATATGGATAGTCTAGATATATATCTAAAGAGAG
CGCGACAAACACACTGCACCACAGGCAGACCGACAAACAGAGACAGGGAG
GAGAGGGAAAGATGTAGCAGGCTGTACCGTAGTGGGGTATGTACAGAGAG
AGAGTGAAAAAAAGAGGGTCAGAGGAGCGTGAAAGCTAGGATTGACCAAA
CTCTCGTAGGGAACCTACATAACACATTAGAGAGACGGAGAGAGAGAGAG
AAAGAGAGGACAGAGGAGATGAACAGTGGAGGGTGTGTAGCAGTAGGGGA
TGGTTAGAGAGAGAGAGGGGGGGGGAAAGGGGGAGTTGGAAAGCGGTGCA
GTGAGAGTAGAGTCAAGAAACGTTTTCAACAAATCAAACTCTGCTGGAAG
CTGAAGAGATGGAAAAGTCCGAAATATCCCGCATGCAGGTGCCTGCCGAT
AGCAGCCATCTCAAAACCTCTGTAAACATTTCTCTGCACGTACACGTACA
GAGCGCGAGAAGACAGAGAGAGAGACAGAGGAGAACTAACAGTAGTGGAG
GGTGTGCAGCAGTAGGGGTTGGTCAGAGAGAGAGAGGAGGAGAGAGAAAG
GGACGTTGGAAAGTAAGTGGTGCATGGAAATCTCGGAACCCGACATCTCT
GAAGCCATGCAGAGACAGAGAAAGAGACACACACACGCACAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGCATAAACTGTGCAAGGTGT
CTTGTGTAGTAGGGGTTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAG
GAGGTAGGACCCGAAATCCATTCCCAACAGGTCAAATGGTGGCATCACAG
AGCCCGAAAAGTCCGAATACTCCGCTCACAGAGGCCGAGAGGCGGTGAAA
TGGACGCCTCTCAGGAAAAAGTCAATTCTTAATAGACTTACATACAAAAC
ATGCGCAACTAATAATGACTTCCGCACAGGTGTGCGTTTGTTTCTCAGTG
TGTGTGCTTTGGGCAGGATATGTATGTATGTATGCACACACATAGGCGTT
CAGGTATTTCCGGTCCTTGGCCACTCCACACACTCTCGCTCTCCCTATTT
CGCTGGGTGGGTGGGTTGTGTAAGCGATTGTTTTTTTCGTCCGGCCGGCC
CCTCGGCATGTGCGCAGACCGGCTCTGACGGCGACAGCAGCTTTATGGAC
TGGGACGGAGACACGAGCGACGACAACTCCGGCGACGAGTACTCGGGGGA
CGAGGTAAGTTTTGTCGTCTTGAAAAAAAAAAAAAAATGTGCGCCGCAAA
GAAGCCGCCGCACCAGTATCTGCGGACGCTTTCCCCATTTTTTGTCGCCA
TGCAAGCCTCTGCGTGCGCACGACGTCGTCTGTGGCCTGTGGTGCGGCCT
TTTTCGCGAGGGAGAGGGAGCTGAGGGCTAACGTGTGCAGGGCGTGTCTG
ACTGCGCGCTAGGCCTTTTGCAAACGTTCAGCGCGTGTTGAGTTCATTCA
CAGCAGCAGTTTTCGCTGTTTGGGTGCGCAGGCTTGACACGTCTCCTGTC
CATGCGGCCACCCTGTCCCCTCTGCCCCCGCTCTCGGTTGAGTGACTGCT
GCTGTACCCACAGGTCGTTGTCTCTGTGCTTCTCGTCGCGTTCCTTACGG
GCCCCCTTCACGGAGCCCCCTTCGCTGCCCGCCCGTCCCCTCTCATGCTT
GCCTTGCCGACCCGCCCACAGCAGCCTTCGCAGGGTTTGCCTTAGGCTAC
AACATTATATGGAATAAAGTGTTGGAATCGGGAAAGGGGGTCGGGGTTTT
GGGTTAGGCTTAGAGTTGCGGAGCCCCTGTCTCTATTCCCTGTCTCTGTT
ACCTGGAGATGAAAAAATAGTTTCTTCGCGAAGGCGGTCACCCCCCCCCC
CACCCACCCCTCGATACCCCCCCCCCCGAAAAAAAAACTCTCACACGTAA
ACGTCCGCCGCCGCCGCCGCCTTCTCTGTGCTGTGCCGTTCGCGACCGTA
GCGAGACGCACAAGGATCCTCAGCAGGAGGAGGAGGAGGAGCCCTTGCCG
GCGGCGACGGCGGCGGGAGCGGGGGAGGTGGAGGAGGAGGGGGACGAAAC
GGAGGGTTGGGGGCCTCTCTGGACTCGGAGCAGGCTGCCAAGCTGCTGGT
GCTCATGTGCCACGCCCGGGACTGTCCCGGCAACCACCGCTCCGCCAGGC
TCGCAGAGGTAAGTTTGGTGCTTTTCGCCTCTGGGTGTTGTCTGTCTGCG
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCGTCGTTG
TCCCTCGTCCCTGACTTCGCCTTTTTAAGCGATGCTGTTTGTGCGGCTAA
ATGTGATCGTTGACGTGGTGTTGACTGTGTGGCGTCTCACGCGGCCGGCC
GTGTCTCGGCATGGTCATAAAAAATACAGATGCGATGGTGTTGAAGCCGT
TCGTGGTGTTTTTGGTGTCTTCGCGTTGCCCCTTGTCCCAACGAGGTGTT
TAGACACTTGGGTCTATCCATTGGGATTTCGGTTGCTGTTGTTGATGTTG
GTGTCGATATGTGGTTGTTTTTGTCGTCGTTGTTGTCGCCCGTTCATGTA
CAGCTTTTGGGCTGATTTTGCATGTGTACTGTATGGATAGCATGCGCTAT
TTGAAGCATGGATAGCTTACATCGTCTAAATCTAATGGGTCAAAGATGCG
TTGAACTAGCTGTCGAATTTTATGCGCAAGTTCCACGCACTTCGCTTTCG
GCTCGAAAAAGAGAGATTAAGTGGTGCCGCCAAAATGTTGGTGCCCGAAA
TACTTGGCATGGCACCCGGTTAAGGTGCCATCTATATGGTGCGAAGGAAG
AAACTACACCCCGCGTAGACCGAATTTCGGAGCTTGATTTCTCCACAGCA
GGGCGCAAAAGCCTTACAGGGCTCCCGTGGTGCTGGACGATACTACTGTA
AAGACGTGAAGACCCACACATGATGGGGGCACCGGGTAGTGTTGGCCGCC
CCTCCCTGCTGCGGGGCAATCGCTGCTGAACCCCCTCTGAAACAGGCCGG
AATGAACTTGCTCGAAACCTTGTGCTGGGTCCCCTTTTAGTGAGGCCTTT
GACCTGTGGCTGGGAGTGTAAAGCAGATCTTGTTTCCTACTAGGGATAAT
TACCGTTGATATATTTATCGATGCCATGCATGCAGATATTCGGAGATCGG
AAGTTTAGTAAATTTAGCAGTTCTCCGAAAGCTTGACGCAGGGCAGAGCA
GGTGCTATCTATATACCACTCTGTTCGCGTCCTGGTCTCGTTATCCAGGA
GAAGGTGTCCTAACGTGAACCAGAGAAGGAACCGAGTGAGGAAAGGGGGG
TATGTATCCCCGTGGAGTGTAACTAGTTATAGTGCCCCCATACATACATG
TGTAGCTCGTGGCTCGAAACGTTAACCTTGTGCTGGTCTGCAAAAAGGGG
CACTGCTTGTAGTTGGCTTTGTGGCTGCTCGCCCACACCCCTCCCCCCAC
ACACCCCACACACACCCCCTAACGGCGATGCATACCAATGACCTCCACCA
CTACCACCACCACCACGATCACCACGATCACAATACGCCGCTTGTTTTGG
CAGGTATGCCGAAGCGTCAAGTTTTTGATGCTGCACTTGCGCGACTGCGA
CGGGAGAACTAGGGCCGGCCAGCCCTGCCCGTTTCCGTGGTGCCAGCCCT
GCACGTCCCTGCTGCACCACCTGATCCAGTGCCCGGAGTCGGCGGGGTGC
CAGGTATGGAAAGTTAGTTGTCTTTTGATGGCGCGCCAGGGCGTGCCACA
CACACAGCGCGTCGGGTCTGTTTTCGGTTTGTGTGTGTGCGTGTGTGTGT
GTGTGTGTTTGTGTGTCAAATGTCATCTTTGTGTATGTGTGTGTGTGCGT
GCGTGTGTGTGCGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGTGTGT
TCGGTGTTCTGTCCCCTCGCCTTTCGGCGTTGCGTTTCTGCTGTGTACAT
GGCGTGCAGGCCGCGGCCAATAGAGGTATAACTTCGTATCGTATGGTGAC
ATTTTTTCAAAGGTGTTGCTTCTGAACATCAGCGGTCGATTTTTACGTCC
AACCCGCTGTGGAGAAAAAAAAAAAAAAAAAAAGGAACAGGGGGACTCTG
GGGGGGGGGAGAGAAAAAAANNNNNNNNNNTTTTTTCAAAGGTGTTGCTT
TTTAACAAAAACACAAGATTTTTACTTTCAACCCAAATAAAAAAAAAAAA
AAAAAAAAAACGGTACAGGGGGACTCTGGTGGTGTGGACAGACACACTAA
TTGTGACCCCGGTTGAGTCGTCTAGCTAAATAGTCGTAGGGGAGGGAGGG
GGCCAGTGGGGCAGACGACGAATAATACACAAGCCAATGATGGGAGGGAA
ACAAAAAAAGAGAAAAAAAAACTTAAAACACCAGCGATTCGATTGTATGT
ACGTCCAACTGCGAAGAAAACTGTTCCAGGGGAGCTGTTGTTATAGACGC
AGTGTCCGGCCCCCTCCCTCGCTCGCCGTCCCAGACAAACTACAGACTAC
AAGCAGTGTTTTTTATTTTATCGTAATTTCTTGCGTCCTTCGTCTATTGA
CACACATGAATCGGTAGGTTGTGTCCGCCCAGATGGTTATTTGCCTGAGA
CAGCAGTGAGTGGGGTGAGTGGAGTGGGCTTGTTGTGCTTGTCTGCACCG
CACTGAAATGATCGAGCTCAGAAGTCGTCCCTTTTCCCCGCCGTGCCTCC
CCCCCCCCCCTCGTTCACGGCAAACCACCAGGTGTGTAACCCCCTGCACC
TGCCATCACCGTTGCGAGATCTGCGCGCCCTGAACCACTCCTCCTCACGT
GCACCCAGCGCCGCGCAACCGACACCACCACCGCCACCATCACCACAA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig16:13258..23755-

>mRNA_L-elsbetiae_contig16.4133.1 ID=mRNA_L-elsbetiae_contig16.4133.1|Name=mRNA_L-elsbetiae_contig16.4133.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3120bp|location=Sequence derived from alignment at L-elsbetiae_contig16:13258..23755- (Laminarionema elsbetiae ELsaHSoW15)
CAGCAGCTAGATCTCCTGATAGAGAGATCCTTCGGCGATCTGCAGTTCCT
CGTGGATGAGTTTTCCAAGTTGGAGGTGCTATTGGCGCCGGAATCCAAAG
AGGGTGAGTCACAGCAGCTAGATCTCCTGATAGAGAGATCCTTCGGCGAT
CTGCAGTTCCTCGTGGATGAGTTTTCCAAGTTGGAGGTGCTATTGGCGCC
GGAATCCAAAGAGGGTGAGTCAGCGGTGGACCCGAAGCTGGTCAAGCTCC
GCTTTTTCATCAGTCACGTGCGTCGAACGATGGGTCGAATGCGGGACGCG
AGGAGCGGCCGCGACCCGCTGTCGGCGCCCCAGCTGGCGCTCCTGGAGGA
GCACATCGCGACGTCCATCGCCCCGGCGGTGGACCCGAAGCTGGTCAAGC
TCCGCTTTTTCATCAGTCACGTGCGTCGAACGATGGGTCGAATGCGGGAC
GCGAGGAGCGGCCGCGACCCGCTGTCGGCGCCCCAGCTGGCGCTCCTGGA
GGAGCACATCGCGACGTCCATCGCCCCGGAAGGGGAAGGGGGAGGGGGGC
ACTCCACGTCGAGGAGCTCGTCGATGTCGAGCGGCATGGGCGGAAGGGGA
AGGGGGAGGGGGGCACTCCACGTCGAGGAGCTCGTCGATGTCGAGCGGCA
TGGGCGGGGCGGGGGGGGGGGGGGGAGCGCTGGTAGGCGGGGACCAGGAG
GAAGAGGACGAGTGGTCGGTGGGGCTGGAGCTGAGCAGCGAGATGTTCGG
CGCCGGCGGGAGTGTTTCTCTCGGCCTGGTGTCGCCGGCGCCGGCGACGA
GTGCGGCCGCGAGCAGGGGTGGTCACGACTCCTCCTCCTTCTCCTCCTGC
TCCTGCTCCTCCTCTTCCTCCTCCTCCTGCCGCTGTTCACCCGTGGCACC
TGCGGCCAGCATCGGCTCGTCGTTTTCGCGCCTGTGCTGGAGTGGCGGCG
GCGGCGGCGGCGGAGGAGGTCTAGACCTGCTGGGCGGGGGCAGGACTCCG
CTGGAGCAGAACCGAACCCGGCGAGATCACCTGGACATGCTGAGCCAGCT
CGAGGCGGAGGGGGTCTTCGCCGCAGATGACAGCTACTCGCCCTGCGGTC
GCGACCCCGGGATTCTCGGCGGCGTCGCCTTCTCGCCGGGCGGGGGGGGG
GGGGGGAGCGCTGGTAGGCGGGGACCAGGAGGAAGAGGACGAGTGGTCGG
TGGGGCTGGAGCTGAGCAGCGAGATGTTCGGCGCCGGCGGGAGTGTTTCT
CTCGGCCTGGTGTCGCCGGCGCCGGCGACGAGTGCGGCCGCGAGCAGGGG
TGGTCACGACTCCTCCTCCTTCTCCTCCTGCTCCTGCTCCTCCTCTTCCT
CCTCCTCCTGCCGCTGTTCACCCGTGGCACCTGCGGCCAGCATCGGCTCG
TCGTTTTCGCGCCTGTGCTGGAGTGGCGGCGGCGGCGGCGGCGGAGGAGG
TCTAGACCTGCTGGGCGGGGGCAGGACTCCGCTGGAGCAGAACCGAACCC
GGCGAGATCACCTGGACATGCTGAGCCAGCTCGAGGCGGAGGGGGTCTTC
GCCGCAGATGACAGCTACTCGCCCTGCGGTCGCGACCCCGGGATTCTCGG
CGGCGTCGCCTTCTCGCCGTCGTCCACCTTGCCGACGGCGCTGCTGCAAC
CTCGCGAGGTCCGGTACCAGTGCGGGGCGTGCAGCCAGAGCTACGCGGCG
ACGGTGACCGGCAACCCTTGGTCGTCCACCTTGCCGACGGCGCTGCTGCA
ACCTCGCGAGGTCCGGTACCAGTGCGGGGCGTGCAGCCAGAGCTACGCGG
CGACGGTGACCGGCAACCCTTGGTGGTTGCTGGTGAGGCAGGAGTGCCCG
GCGTGCCACAAGATGCAGATCCCTCGCGTCGACATCTTGAATCCCACCAA
CAACGTGGAGCGCCACATCGCCTTCCTTACGGAGGCGTGCGCAGAGGTGG
TTGCTGGTGAGGCAGGAGTGCCCGGCGTGCCACAAGATGCAGATCCCTCG
CGTCGACATCTTGAATCCCACCAACAACGTGGAGCGCCACATCGCCTTCC
TTACGGAGGCGTGCGCAGAGACCGGCTCTGACGGCGACAGCAGCTTTATG
GACTGGGACGGAGACACGAGCGACGACAACTCCGGCGACGAGTACTCGGG
GGACGAGGTAAACCGGCTCTGACGGCGACAGCAGCTTTATGGACTGGGAC
GGAGACACGAGCGACGACAACTCCGGCGACGAGTACTCGGGGGACGAGGT
AACCCTTGCCGGCGGCGACGGCGGCGGGAGCGGGGGAGGTGGAGGAGGAG
GGGGACGAAACGGAGGGTTGGGGGCCTCTCTGGACTCGGAGCAGGCTGCC
AAGCTGCTGGTGCTCATGTGCCACGCCCGGGACTGTCCCGGCAACCACCG
CTCCGCCAGGCTCGCAGAGCCCTTGCCGGCGGCGACGGCGGCGGGAGCGG
GGGAGGTGGAGGAGGAGGGGGACGAAACGGAGGGTTGGGGGCCTCTCTGG
ACTCGGAGCAGGCTGCCAAGCTGCTGGTGCTCATGTGCCACGCCCGGGAC
TGTCCCGGCAACCACCGCTCCGCCAGGCTCGCAGAGGTATGCCGAAGCGT
CAAGTTTTTGATGCTGCACTTGCGCGACTGCGACGGGAGAACTAGGGCCG
GCCAGCCCTGCCCGTTTCCGTGGTGCCAGCCCTGCACGTCCCTGCTGCAC
CACCTGATCCAGTGCCCGGAGTCGGCGGGGTGCCAGGTATGCCGAAGCGT
CAAGTTTTTGATGCTGCACTTGCGCGACTGCGACGGGAGAACTAGGGCCG
GCCAGCCCTGCCCGTTTCCGTGGTGCCAGCCCTGCACGTCCCTGCTGCAC
CACCTGATCCAGTGCCCGGAGTCGGCGGGGTGCCAGGTGTGTAACCCCCT
GCACCTGCCATCACCGTTGCGAGATCTGCGCGCCCTGAACCACTCCTCCT
CACGTGCACCCAGCGCCGCGCAACCGACACCACCACCGCCACCATCACCA
CAAGTGTGTAACCCCCTGCACCTGCCATCACCGTTGCGAGATCTGCGCGC
CCTGAACCACTCCTCCTCACGTGCACCCAGCGCCGCGCAACCGACACCAC
CACCGCCACCATCACCACAA
back to top