mRNA_L-elsbetiae_contig1598.4121.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1598.4121.1
Unique NamemRNA_L-elsbetiae_contig1598.4121.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1598.4121.1 vs. uniprot
Match: D7FRN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRN6_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 2.790e-13
Identity = 66/157 (42.04%), Postives = 82/157 (52.23%), Query Frame = 2
Query: 2024 LGKSSREETFDVATARNGFSGIQPCDVGGAT--KVCRTPKPRGRWRRTSVSNGHWRRATDVKRGLAGPGLRGTGAA-ATTSNASFPRPAA-QGVHPFL--ASAGVRRGHGIVTGGVNEEEGARRDGMDHTPERRPIRPKAIKSPMYARRGRSEERNV 2476
            +GK+  E+TFDVATARNGFSGI+     G +  K C TP PRGR  R     G+  R  D  +      +    AA AT  N S   P   +GVH FL    A  RR  G     + EE+   RD  D TPERRP RP AIKSP+  +R   ++R +
Sbjct:    1 MGKACTEDTFDVATARNGFSGIRSLQALGLSEEKGCSTPTPRGR--RCDAWAGN--RGGDRGQASHRAAMHVVSAAVATAENGSSSEPRCMRGVHAFLNPGEAATRRAAGSKF--LPEEDEKTRDWRDRTPERRPARPPAIKSPIGEKRVGQKDRTM 151          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1598.4121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRN6_ECTSI2.790e-1342.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1598contigL-elsbetiae_contig1598:12381..18955 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-12_002370.1
Exons10
Model size2554
Cds size2418
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815657.7780595-CDS-L-elsbetiae_contig1598:12380..124721622815657.7780595-CDS-L-elsbetiae_contig1598:12380..12472Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 12381..12472 -
1691683019.2671509-CDS-L-elsbetiae_contig1598:12380..124721691683019.2671509-CDS-L-elsbetiae_contig1598:12380..12472Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 12381..12472 -
1622815657.7916505-CDS-L-elsbetiae_contig1598:12699..128361622815657.7916505-CDS-L-elsbetiae_contig1598:12699..12836Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 12700..12836 -
1691683019.2764657-CDS-L-elsbetiae_contig1598:12699..128361691683019.2764657-CDS-L-elsbetiae_contig1598:12699..12836Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 12700..12836 -
1622815657.803393-CDS-L-elsbetiae_contig1598:13068..132741622815657.803393-CDS-L-elsbetiae_contig1598:13068..13274Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 13069..13274 -
1691683019.284945-CDS-L-elsbetiae_contig1598:13068..132741691683019.284945-CDS-L-elsbetiae_contig1598:13068..13274Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 13069..13274 -
1622815657.8200538-CDS-L-elsbetiae_contig1598:13771..138921622815657.8200538-CDS-L-elsbetiae_contig1598:13771..13892Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 13772..13892 -
1691683019.2929616-CDS-L-elsbetiae_contig1598:13771..138921691683019.2929616-CDS-L-elsbetiae_contig1598:13771..13892Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 13772..13892 -
1622815657.8314264-CDS-L-elsbetiae_contig1598:14449..146831622815657.8314264-CDS-L-elsbetiae_contig1598:14449..14683Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 14450..14683 -
1691683019.3016698-CDS-L-elsbetiae_contig1598:14449..146831691683019.3016698-CDS-L-elsbetiae_contig1598:14449..14683Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 14450..14683 -
1622815657.8432372-CDS-L-elsbetiae_contig1598:14823..152941622815657.8432372-CDS-L-elsbetiae_contig1598:14823..15294Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 14824..15294 -
1691683019.3104346-CDS-L-elsbetiae_contig1598:14823..152941691683019.3104346-CDS-L-elsbetiae_contig1598:14823..15294Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 14824..15294 -
1622815657.854552-CDS-L-elsbetiae_contig1598:15470..161601622815657.854552-CDS-L-elsbetiae_contig1598:15470..16160Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 15471..16160 -
1691683019.3200872-CDS-L-elsbetiae_contig1598:15470..161601691683019.3200872-CDS-L-elsbetiae_contig1598:15470..16160Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 15471..16160 -
1622815657.8640788-CDS-L-elsbetiae_contig1598:16451..167111622815657.8640788-CDS-L-elsbetiae_contig1598:16451..16711Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 16452..16711 -
1691683019.3299732-CDS-L-elsbetiae_contig1598:16451..167111691683019.3299732-CDS-L-elsbetiae_contig1598:16451..16711Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 16452..16711 -
1622815657.8761904-CDS-L-elsbetiae_contig1598:17085..172201622815657.8761904-CDS-L-elsbetiae_contig1598:17085..17220Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 17086..17220 -
1691683019.340071-CDS-L-elsbetiae_contig1598:17085..172201691683019.340071-CDS-L-elsbetiae_contig1598:17085..17220Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 17086..17220 -
1622815657.8870995-CDS-L-elsbetiae_contig1598:18747..188191622815657.8870995-CDS-L-elsbetiae_contig1598:18747..18819Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 18748..18819 -
1691683019.3508153-CDS-L-elsbetiae_contig1598:18747..188191691683019.3508153-CDS-L-elsbetiae_contig1598:18747..18819Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 18748..18819 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815657.8974152-UTR-L-elsbetiae_contig1598:18819..189551622815657.8974152-UTR-L-elsbetiae_contig1598:18819..18955Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1598 18820..18955 -
1691683019.3589938-UTR-L-elsbetiae_contig1598:18819..189551691683019.3589938-UTR-L-elsbetiae_contig1598:18819..18955Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1598 18820..18955 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1598.4121.1prot_L-elsbetiae_contig1598.4121.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1598 12381..18819 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1598.4121.1

>prot_L-elsbetiae_contig1598.4121.1 ID=prot_L-elsbetiae_contig1598.4121.1|Name=mRNA_L-elsbetiae_contig1598.4121.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=806bp
MAWQPRWQGSFGELCRDVNGTDRQVDGRVLHACEALGLCQGRFVPTILLA
KRLRGFSLAWHSFTLEECEAFVEVELDADEDGQVTVQDIFEFLHNWQLQA
QRAQRVSSDRSSRPSALVGGSTLASQRRREARRQTGLVATGKFPRGLREK
LLAAARQARSRGENVLRMLRVASPDGLEGDRNEKGSPSIGAEGACRFLRQ
LGVDCDSSATATRASGGSACALQGERACYLHQERTQELDTTRGPNHSREG
ISCLRPREHFHRGRSMYIPLSRQHCWGGCADKHNLNRAGTPSSYAGPWSA
GCEQSPTAGARPLSDARTTGSTKYTTARLVPEGSNPSDSPMLPSKSKWVV
HGEGDPRHHHKGVDSASEETKGVNDVDVDEDRRTSSGTGMSQRLRRAAED
LKRMQTEYKELQTQVYGRREERPSAPPEANAQPTDDHTGEEVGRFSYHTT
SRSPYHRPSSFQHGHRNLRHDDTNYFEKKQQSSPDFQGGGRKHGEKWETD
KEQTVKSSPIPLSSSGEETKNSPDAARYEASTAACGGLFVCGLVSAASVE
VSFRLITPMFSVVAAVDSSASPLLFYRRRQHAPRTSRYRRYARSTAEEIS
SAGARAGVSGWPRHGPDTCRCRALLLLAALGKSSREETFDVATARNGFSG
IQPCDVGGATKVCRTPKPRGRWRRTSVSNGHWRRATDVKRGLAGPGLRGT
GAAATTSNASFPRPAAQGVHPFLASAGVRRGHGIVTGGVNEEEGARRDGM
DHTPERRPIRPKAIKSPMYARRGRSEERNVWDRRSGRWARPRPHSGGCVR
SRSADH
back to top

mRNA from alignment at L-elsbetiae_contig1598:12381..18955-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1598.4121.1 ID=mRNA_L-elsbetiae_contig1598.4121.1|Name=mRNA_L-elsbetiae_contig1598.4121.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6575bp|location=Sequence derived from alignment at L-elsbetiae_contig1598:12381..18955- (Laminarionema elsbetiae ELsaHSoW15)
AGAGGGAGATTAATAACAAGGGATCCGGCGCCAGGAGCTGATGATTATGC TTCTTTGTTCCTGAGCGAAACCGAGGTGCAAGCTGTTGCCGACGCGCACC CTGTCGCCTTGAGGGCCCTCTTCCTACCAGACTTTGATGGCGTGGCAACC TCGTTGGCAAGGCTCCTTCGGGGAGTTGTGCAGAGATGTAAATGGAACGG ACAGGCAAGTCTCGACAGACTCCATAGATAAACTGCCGTCGCGTAAATTA GACGATCATCTACATAAAAGTTAGACCAGATAGTACTCCGGAATTACTGA AGAATCATGAGACACGCACTTAGACTACATACATAGCTAAACTCAAAATG TTGACTGATTTTTAACGAAGTACCTCTCGTTAGTAGCGCAAGGTGCATGC GTGTGGCGGTCGCCACTCTATGGACTCAAGTCTTATGTATGTAGTTTCGT TTCTACTTTAAATTTTACTAAATATTTAATTATACTTCCTCTGTCCTATA AGTCTGTGCCATTATGGGCGCTTGGTCCTGTGGGTACTCCCGCGTTGATG TTTATCCTTTCGTTGGGTGTGTTACATAGAAATAAAACACAAAGACAAAG CTCATCATAAAAAAAACTAACATCGGAGGTATGTGGCCTTTCAACACTAA AATCATGTCCAAATACACTCCATTTTGTAAGCACTTTTTCACCTGTCTGG GTTCAGGCCCAATTATTATGGCAAATTCTAGGCGTTTTCGCGTCAACAGC ATTAATTTTACGACAAAAAAGTGGCAAATGGTGCATGTGTCGCTCGACCT TCACGTAGACGACATCCGCAGTCGATGGTTGTTCTGCGGTTTTCGCACCT TTCCACCATTTTTTGCGATTTTTCGTTCTTCCGGGTCTCTCATGACCCCG GGGAGAACCCGGCGCGCGGACCACCTCCCCGGCATTGTTGGGTATATAGT CTATATCTACCAGTATAGAACCAGGGGGTGTATCCCCCGCGGTTGGTGAT GTTGGCTTTTTCCAGTTTTGTTTTCACCTCACACAGCGTGTAGAGGGCTC CGGACTATTTATCTGTGTCTGATCTTTCTTTTGTTTTTCTGCTTTTGCGA ACCCCTCGAGTCCATTTTGTTTTCTTTCATTTTTCAGCATAACACCCTTT TTAGGGTAAGTTATCCTGTGACGACGGGAATCGACCACGTCAGTATTGGA TTAGTGCGGACTCATGAGCGTCTCAGTTTATTTCTATGGCGAGTTTGTCT GATCATATACTTCGAAGTAGTACATATACTTCGAAGTACGAAGTAATACT TGTATATAGCTAATTTGGCGCCGTTGTTGGCCTCAAAAGTGGTTCCAATC GAGATCTAGCCGGTTTCCGTCCGGGTATCTCGGTACCTGCTGTAGCCAAC GACCTCTCCTTCTGGCAGTGCCCGGATACGCATTATCCATTTTTGGGGTA ACTGTTGTTTTTTCGGCCGTTCGGCCGCAACGTTCAAGCACCAGCTAAAA CAAAACACACGATCTTTACTAAAAAATTCACTGAAGAATCAACTACACAA AACGAAAAACACATTGGACACGGTTAAAGCCCGTACAAGCACAACGGCAC AGACTTATGGGACAGTGGCAATATTATCTGGTTGTTGGGTTGTGCTGGTA TTTTGAGAAGATACATCGAAGTACAACAAGTCTACAGGGCTTTCGGGAGA CGACGAGTGACCCCTCCCCTCTCATACATGTGCAGGTGGATGGTCGAGTA CTCCATGCCTGTGAAGCATTGGGTTTGTGCCAGGGAAGATTCGTGCCAAC TATCTTGCTGGCGAAGCGGCTCCGAGGCTTCAGTCTCGCTTGGCATAGCT TTACCCTCGAGGAATGCGAGGTGAAGTAGAAAGGCCAGCGTTCAAACCTA TCAAGAGGAAATTAGCCTAGATGTTCGCATGTGTCTTCATAAAACCGGTC GATGGCGTGCGAGAGGGGGATGGGCTGTGATCGTTGTATGTTATTTATCA TGTCCTAGTCGAGAGGGGAGGGAGCGTTACCTCCCTTCGATGGTTGTACC CGTCTCTGCCCCAAACATTGCAACCTCAGCGTATCATTGGTACACCGCAC AAATGAGGTCGTCCAGGTGCCTCTCAGTAACTATCGTTGGTATGGCACTG ACTGAGCCCGTCCACTTGTGAAGAACCCATAGGGGCGTGAATACGTCCTT CACGAACACCAATTTGCTGTCGCGCCATGGGCTTCTCGCGGCAGGCATTC GTGGAGGTTGAGCTCGACGCCGACGAGGATGGGCAAGTTACGGTGCAGGA CATTTTTGAGTTTCTCCACAACTGGCAGCTACAGGCCCAACGGGCACAAC GGGTGAGTAGCGACCGGTCAAGTCGCCCGAGCGCTCTGGTCGGAGGCAGT ACTTTAGCATCCCAGAGGCGACGGGAGGCACGGCGACAGACTGGTTTAGT CGCCACGGGAAAATTCCCAAGGGGCTTGCGGGAGAAGCTCCTGGCTGCCG CCAGGTGAGGGAAAGACAAGTTACAAGGACGAAAGTACTTTGTCGGGGGT AGCGCGCCTTGCAAGGTTGTTTATCCGGTGGCGTAATGTTCCTACCCCGG CAAAGGCCCGGAGTCGTTTATTCCGATGGCGCAGTTGCATCAAGTTTCCT TTCCACGCCCGTGCATAGCGTCACTTCCGCTTCGCCGCTCTCACGCCACG GCGTCGAAAAATAGCTCACGGGCCCGCGCCTTCTCGCCTCACGATCATGG GGTGGTTTTCGTTTCAACGCTTTTCTGTGGATGCATGCTCTTCAGACAAG CTCGTTCGCGCGGCGAAAACGTTTTGAGAATGTTGCGGGTCGCTTCCCCG GACGGCTTGGAGGGAGACAGGAATGAGAAAGGGTCTCCTTCAATCGGTGC CGAGGGAGCGTGTCGCTTTTTGCGACAACTCGGCGTCGATTGCGACTCGA GCGCTACCGCGACGAGAGCAAGTGGTGGATCGGCTTGCGCTCTGCAGGGA GAGCGTGCATGCTACCTCCACCAGGAAAGGACTCAAGAGCTCGACACGAC CAGGGGGCCCAACCACTCCCGAGAAGGAATCTCTTGTCTGCGACCACGGG AGCACTTTCATCGGGGACGCAGCATGTACATTCCGTTATCAAGACAACAC TGCTGGGGCGGTTGTGCCGACAAGCACAACCTAAACAGAGCAGGGACACC GTCATCGTACGCAGGGCCATGGTCGGCCGGGTGTGAGCAGTCCCCGACGG CGGGGGCCCGGCCCCTTTCGGATGCGCGCACTACGGGCAGCACGAAGTAC ACGACGGCAAGGTTGGTGCCCGAGGGTTCGAACCCTTCAGATTCTCCAAT GCTTCCGTCAAAGTCGAAGTGGGTGGTCCACGGAGAAGGTGATCCGAGAC ATCACCATAAGGGCGTGGACAGCGCAAGCGAAGAAACGAAGGGCGTCAAC GACGTTGACGTTGACGAGGACCGCAGAACAAGTAGGTGAGAGTGTGCGAA AATGCCCCGCTGCATGGCACGTGGCTTGTGCACTACCGATCTTGGCCGCC AAGGGTTTGTATCCTTCTCGTAAAACCGCATCTTCGCGCGATCTCGAAAG CTTACGTTTCGAACCATGCTGTCGTACCTCGGTCGTTCTCTGTCAGCACC CGAAAGGGCAGCGGTACCGGGATGTCCCAACGGTTGCGCCGCGCTGCGGA GGATCTGAAGCGGATGCAAACGGAATACAAGGAGCTCCAGACGCAAGTAT ACGGCAGACGAGAAGAACGCCCAAGCGCGCCACCCGAAGCAAATGCTCAA CCGACCGACGACCATACTGGTGAAGAGGTTGGACGCTTTTCGTACCATAC CACCAGCAGAAGCCCGTATCACCGCCCTAGTTCTTTCCAGCATGGTCACA GGAACCTTCGACACGACGACACTAACTACTTCGAGAAGAAGCAGCAGTCT TCGCCGGATTTCCAGGGGGGTGGCAGAAAACACGGAGAAAAATGGGAGAC CGACAAAGAGCAGACAGTAAAATCCTCGCCGATACCGCTGTCGTCATCGG GCGAAGAGACAAAAAACTCGCCGGACGCAGCCAGGTACGAGGCGTCTACT GCTGCATGTGGCGGCCTGTTTGTTTGTGGGCTGTATGATCAAAATGATTG CTCGCGCCTCTCTCGTACTACTGCATAGTGATCTTCCGTCAACGCAGAAC GACCTCACCGAGCATGTACTAGGACACAAGCGTTGGAACTCCTGTCGTAC GCGCGGCTTGCGTAGGTATCAGCGTATCAGCTGCGTCAGTGGAGGTATCA TTTAGGCTTATTACCCCCATGTTCTCCGTTGTTGCTGCGGTCGACTCGTC CGCGTCGCCGCTTCTCTTTTACAGACGAAGGCAGCACGCTCCACGAACAA GCAGATATCGACGTTATGCTCGGAGCACCGCAGAGGAGATTAGCTCAGCA GGTGCGCGGGCGGGCGTGTCTGGCTGGCCTCGTCACGGGCCCGATACCTG CAGATGGTGAGTTTTGTTAAGGGACTACCCTGCCCGTGTACCTCTCCAGG TCCACGGTAACCGTATCGGTCTTGTCGCGATGGGGGTTGCTTGAAATGTC GGAAAGGGCTCAATATCTTGTGGTTTGGGGATTTACGAGAAGTTTTCAAC ATCTTTGGTTGTCCAAACAGGCGTCAGATAGGTCTGTCGTAGCTTGCATG GAGTTGTAAGCAGCCTCCCGCTGCCTTCCTACCACTAATGACATATCCTA TGTAGCGGTTTTTACCGCATCAAGTGTTGGAACAGTACGGACATAGAGAG ATATTGGGTGGAGAGATCGGAACGGTTGTTAATGTGAAGAAACAACAAGA ACAACAAGTGGTTCAGTTGGAGTTCGAATCGCCTGCCTGCAGGGGTCACG GCGAATAAAATGACGGTGATCGGAACCGCGAAGGAAACTGCTGGTGTTGG TTTCTCGTTTGTACATTGCTTTCTCGAATTCGTGTGTTTAATCCATCGTA TGTACGCTCATGGCAGTAGTCTGTGATCTGATATTGTTTCGCGCCGTCTC CACCTCTGTCCAGCCGTGCTCTTCTCCTGCTAGCCGCCCTAGGGAAGAGC TCTCGAGAGGAAACGTTTGATGTCGCCACTGCCCGCAACGGCTTTTCGGG CATTCAGCCCTGTGATGTTGGCGGTGCAACAAAGGTACTGTAGGGAGGGA AATCTACTGGTACGGCAGTATTCACCATGCTCCGTACACCCATCCGGTCC AACGCGGGCGTTCGTCGGAAACCCCTTGGTGAAAAAAAGCTTATTTCGAC CATGCTGGGCCAACAAACCGTCTTAGTGTCCGGGGGGACCGACCACTACC TCTTAACATGAAAAGCCTTTCTCTTGGAAAAATAAAGTGCAGGCACAAAG CCTCCTATACTCTCCTAAGTCCCGACTACACGGTCATGTGAGCAAGACAT CTCCACGAAAATAAGACCCATCTAGTAGAGACGCGTGGTTTTTTCTTCTT GTGGTGGTCCTTCAACAAATGATCTTTCGAGGAAAAATCTTGAGTAACTC GCCGACGCTGTGCCACGAGGTAGCCGGAGGAAACGTGCACGCAAGAAGTA CCGGCTACACCCACAGCAAAATATGCCTCCTCATCAGCATACATTGCCAT CCTCGCTTTAACCCGTGGGTAAAACAATCAGGTGTGTCGCACGCCCAAGC CTAGGGGCAGATGGCGTAGAACCAGTGTAAGCAACGGGCACTGGAGGCGG GCAACGGATGTCAAGAGGGGCCTGGCGGGTCCAGGGCTGCGGGGCACCGG CGCTGCTGCTACAACAAGCAACGCCAGTTTTCCTCGCCCTGCTGCGCAAG GGGTGCATCCCTTCCTGGCCTCGGCGGGTGTGAGAAGGTGGGTACTTTTA TCCGAAGCTCACGGTCCACTTGGAAGTCCGGGTTGGCAGGGGCGCGGAGC GCTCCGGATGCAAGATAAGGAAGCTTTGGAGGGGCGAAGATGGCAATGGC GGCGACATTGTGTTGGTATTCAGCATAAGTACAGACTTGTCGCGCATATT GTAGCCATTTGAAAACTGCGTTTTTTTCACGCGGTGCACATCCTTCACGC ACTCCAGGAGCAACACAAGAGGGCATGGGATTGTGACGGGTGGCGTCAAC GAAGAGGAGGGTGCGAGAAGAGACGGGATGGATCACACCCCAGAGCGACG ACCCATTCGCCCAAAGGCGATCAAGAGCCCTATGTACGCCAGGCGAGGCC GTTCCGGTAAGAGGCGCTTGCACGGTAGCGCTCTGCCTGAGGACGAGATG ATATGGGAAAGGAAAACACAGGATCATTGGGTGGGGAGCGCTGTCATTTT CTGGCTACTGCCACGCTGCCACGTGTTCGTGCGTGAGGTCAGTGTCTGTG TTGTATCAAATTATCCGATACGTCCTGCTAATGCTTGTCCCGCGCTTGCT GTCGCCAAACTCCACATTCACAACATTCAACAGAGGAGCGCAATGTTTGG GACAGAAGGAGCGGGCGTTGGGCGAGGCCAAGACCTCACTCAGGGGGGTG CGTTCGCTCACGTTCGGCTGACCAT
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1598:12381..18955-

>mRNA_L-elsbetiae_contig1598.4121.1 ID=mRNA_L-elsbetiae_contig1598.4121.1|Name=mRNA_L-elsbetiae_contig1598.4121.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4836bp|location=Sequence derived from alignment at L-elsbetiae_contig1598:12381..18955- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGTGGCAACCTCGTTGGCAAGGCTCCTTCGGGGAGTTGTGCAGAGA
TGTAAATGGAACGGACAGGCAAATGGCGTGGCAACCTCGTTGGCAAGGCT
CCTTCGGGGAGTTGTGCAGAGATGTAAATGGAACGGACAGGCAAGTGGAT
GGTCGAGTACTCCATGCCTGTGAAGCATTGGGTTTGTGCCAGGGAAGATT
CGTGCCAACTATCTTGCTGGCGAAGCGGCTCCGAGGCTTCAGTCTCGCTT
GGCATAGCTTTACCCTCGAGGAATGCGAGGTGGATGGTCGAGTACTCCAT
GCCTGTGAAGCATTGGGTTTGTGCCAGGGAAGATTCGTGCCAACTATCTT
GCTGGCGAAGCGGCTCCGAGGCTTCAGTCTCGCTTGGCATAGCTTTACCC
TCGAGGAATGCGAGGCATTCGTGGAGGTTGAGCTCGACGCCGACGAGGAT
GGGCAAGTTACGGTGCAGGACATTTTTGAGTTTCTCCACAACTGGCAGCT
ACAGGCCCAACGGGCACAACGGGTGAGTAGCGACCGGTCAAGTCGCCCGA
GCGCTCTGGTCGGAGGCAGTACTTTAGCATCCCAGAGGCGACGGGAGGCA
CGGCGACAGACTGGTTTAGTCGCCACGGGAAAATTCCCAAGGGGCTTGCG
GGAGAAGCTCCTGGCTGCCGCCAGGCATTCGTGGAGGTTGAGCTCGACGC
CGACGAGGATGGGCAAGTTACGGTGCAGGACATTTTTGAGTTTCTCCACA
ACTGGCAGCTACAGGCCCAACGGGCACAACGGGTGAGTAGCGACCGGTCA
AGTCGCCCGAGCGCTCTGGTCGGAGGCAGTACTTTAGCATCCCAGAGGCG
ACGGGAGGCACGGCGACAGACTGGTTTAGTCGCCACGGGAAAATTCCCAA
GGGGCTTGCGGGAGAAGCTCCTGGCTGCCGCCAGACAAGCTCGTTCGCGC
GGCGAAAACGTTTTGAGAATGTTGCGGGTCGCTTCCCCGGACGGCTTGGA
GGGAGACAGGAATGAGAAAGGGTCTCCTTCAATCGGTGCCGAGGGAGCGT
GTCGCTTTTTGCGACAACTCGGCGTCGATTGCGACTCGAGCGCTACCGCG
ACGAGAGCAAGTGGTGGATCGGCTTGCGCTCTGCAGGGAGAGCGTGCATG
CTACCTCCACCAGGAAAGGACTCAAGAGCTCGACACGACCAGGGGGCCCA
ACCACTCCCGAGAAGGAATCTCTTGTCTGCGACCACGGGAGCACTTTCAT
CGGGGACGCAGCATGTACATTCCGTTATCAAGACAACACTGCTGGGGCGG
TTGTGCCGACAAGCACAACCTAAACAGAGCAGGGACACCGTCATCGTACG
CAGGGCCATGGTCGGCCGGGTGTGAGCAGTCCCCGACGGCGGGGGCCCGG
CCCCTTTCGGATGCGCGCACTACGGGCAGCACGAAGTACACGACGGCAAG
GTTGGTGCCCGAGGGTTCGAACCCTTCAGATTCTCCAATGCTTCCGTCAA
AGTCGAAGTGGGTGGTCCACGGAGAAGGTGATCCGAGACATCACCATAAG
GGCGTGGACAGCGCAAGCGAAGAAACGAAGGGCGTCAACGACGTTGACGT
TGACGAGGACCGCAGAACAAGTAGACAAGCTCGTTCGCGCGGCGAAAACG
TTTTGAGAATGTTGCGGGTCGCTTCCCCGGACGGCTTGGAGGGAGACAGG
AATGAGAAAGGGTCTCCTTCAATCGGTGCCGAGGGAGCGTGTCGCTTTTT
GCGACAACTCGGCGTCGATTGCGACTCGAGCGCTACCGCGACGAGAGCAA
GTGGTGGATCGGCTTGCGCTCTGCAGGGAGAGCGTGCATGCTACCTCCAC
CAGGAAAGGACTCAAGAGCTCGACACGACCAGGGGGCCCAACCACTCCCG
AGAAGGAATCTCTTGTCTGCGACCACGGGAGCACTTTCATCGGGGACGCA
GCATGTACATTCCGTTATCAAGACAACACTGCTGGGGCGGTTGTGCCGAC
AAGCACAACCTAAACAGAGCAGGGACACCGTCATCGTACGCAGGGCCATG
GTCGGCCGGGTGTGAGCAGTCCCCGACGGCGGGGGCCCGGCCCCTTTCGG
ATGCGCGCACTACGGGCAGCACGAAGTACACGACGGCAAGGTTGGTGCCC
GAGGGTTCGAACCCTTCAGATTCTCCAATGCTTCCGTCAAAGTCGAAGTG
GGTGGTCCACGGAGAAGGTGATCCGAGACATCACCATAAGGGCGTGGACA
GCGCAAGCGAAGAAACGAAGGGCGTCAACGACGTTGACGTTGACGAGGAC
CGCAGAACAAGTAGCGGTACCGGGATGTCCCAACGGTTGCGCCGCGCTGC
GGAGGATCTGAAGCGGATGCAAACGGAATACAAGGAGCTCCAGACGCAAG
TATACGGCAGACGAGAAGAACGCCCAAGCGCGCCACCCGAAGCAAATGCT
CAACCGACCGACGACCATACTGGTGAAGAGGTTGGACGCTTTTCGTACCA
TACCACCAGCAGAAGCCCGTATCACCGCCCTAGTTCTTTCCAGCATGGTC
ACAGGAACCTTCGACACGACGACACTAACTACTTCGAGAAGAAGCAGCAG
TCTTCGCCGGATTTCCAGGGGGGTGGCAGAAAACACGGAGAAAAATGGGA
GACCGACAAAGAGCAGACAGTAAAATCCTCGCCGATACCGCTGTCGTCAT
CGGGCGAAGAGACAAAAAACTCGCCGGACGCAGCCAGGTACGAGGCGTCT
ACTGCTGCATGTGGCGGCCTGTTTGTTTGTGGGCTCGGTACCGGGATGTC
CCAACGGTTGCGCCGCGCTGCGGAGGATCTGAAGCGGATGCAAACGGAAT
ACAAGGAGCTCCAGACGCAAGTATACGGCAGACGAGAAGAACGCCCAAGC
GCGCCACCCGAAGCAAATGCTCAACCGACCGACGACCATACTGGTGAAGA
GGTTGGACGCTTTTCGTACCATACCACCAGCAGAAGCCCGTATCACCGCC
CTAGTTCTTTCCAGCATGGTCACAGGAACCTTCGACACGACGACACTAAC
TACTTCGAGAAGAAGCAGCAGTCTTCGCCGGATTTCCAGGGGGGTGGCAG
AAAACACGGAGAAAAATGGGAGACCGACAAAGAGCAGACAGTAAAATCCT
CGCCGATACCGCTGTCGTCATCGGGCGAAGAGACAAAAAACTCGCCGGAC
GCAGCCAGGTACGAGGCGTCTACTGCTGCATGTGGCGGCCTGTTTGTTTG
TGGGCTCGTATCAGCTGCGTCAGTGGAGGTATCATTTAGGCTTATTACCC
CCATGTTCTCCGTTGTTGCTGCGGTCGACTCGTCCGCGTCGCCGCTTCTC
TTTTACAGACGAAGGCAGCACGCTCCACGAACAAGCAGATATCGACGTTA
TGCTCGGAGCACCGCAGAGGAGATTAGCTCAGCAGGTGCGCGGGCGGGCG
TGTCTGGCTGGCCTCGTCACGGGCCCGATACCTGCAGATGCGTATCAGCT
GCGTCAGTGGAGGTATCATTTAGGCTTATTACCCCCATGTTCTCCGTTGT
TGCTGCGGTCGACTCGTCCGCGTCGCCGCTTCTCTTTTACAGACGAAGGC
AGCACGCTCCACGAACAAGCAGATATCGACGTTATGCTCGGAGCACCGCA
GAGGAGATTAGCTCAGCAGGTGCGCGGGCGGGCGTGTCTGGCTGGCCTCG
TCACGGGCCCGATACCTGCAGATGCCGTGCTCTTCTCCTGCTAGCCGCCC
TAGGGAAGAGCTCTCGAGAGGAAACGTTTGATGTCGCCACTGCCCGCAAC
GGCTTTTCGGGCATTCAGCCCTGTGATGTTGGCGGTGCAACAAAGCCGTG
CTCTTCTCCTGCTAGCCGCCCTAGGGAAGAGCTCTCGAGAGGAAACGTTT
GATGTCGCCACTGCCCGCAACGGCTTTTCGGGCATTCAGCCCTGTGATGT
TGGCGGTGCAACAAAGGTGTGTCGCACGCCCAAGCCTAGGGGCAGATGGC
GTAGAACCAGTGTAAGCAACGGGCACTGGAGGCGGGCAACGGATGTCAAG
AGGGGCCTGGCGGGTCCAGGGCTGCGGGGCACCGGCGCTGCTGCTACAAC
AAGCAACGCCAGTTTTCCTCGCCCTGCTGCGCAAGGGGTGCATCCCTTCC
TGGCCTCGGCGGGTGTGAGAAGGTGTGTCGCACGCCCAAGCCTAGGGGCA
GATGGCGTAGAACCAGTGTAAGCAACGGGCACTGGAGGCGGGCAACGGAT
GTCAAGAGGGGCCTGGCGGGTCCAGGGCTGCGGGGCACCGGCGCTGCTGC
TACAACAAGCAACGCCAGTTTTCCTCGCCCTGCTGCGCAAGGGGTGCATC
CCTTCCTGGCCTCGGCGGGTGTGAGAAGAGGGCATGGGATTGTGACGGGT
GGCGTCAACGAAGAGGAGGGTGCGAGAAGAGACGGGATGGATCACACCCC
AGAGCGACGACCCATTCGCCCAAAGGCGATCAAGAGCCCTATGTACGCCA
GGCGAGGCCGTTCCGAGGGCATGGGATTGTGACGGGTGGCGTCAACGAAG
AGGAGGGTGCGAGAAGAGACGGGATGGATCACACCCCAGAGCGACGACCC
ATTCGCCCAAAGGCGATCAAGAGCCCTATGTACGCCAGGCGAGGCCGTTC
CGAGGAGCGCAATGTTTGGGACAGAAGGAGCGGGCGTTGGGCGAGGCCAA
GACCTCACTCAGGGGGGTGCGTTCGCTCACGTTCGGCTGACCATAGGAGC
GCAATGTTTGGGACAGAAGGAGCGGGCGTTGGGCGAGGCCAAGACCTCAC
TCAGGGGGGTGCGTTCGCTCACGTTCGGCTGACCAT
back to top