mRNA_L-elsbetiae_contig15950.4107.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15950.4107.1 vs. uniprot
Match: D7FPE8_ECTSI (Intraflagellar transpot protein 74 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE8_ECTSI) HSP 1 Score: 169 bits (427), Expect = 1.270e-48 Identity = 90/113 (79.65%), Postives = 98/113 (86.73%), Query Frame = 1 Query: 1 QGMSGMKTAGGGGIG-----RQVQDASFFIGVLRGKMNDVRAEVGRLRTEIERHDKDVSQQGHLERTYESMLQEVKTLEGTLADYNLAVDKARTTADPGEVTKYLHDLEDQNR 324 QGMSGMKTAG RQVQD SFFIGVLR KMNDVRAE+GRL+ EI+RH+K VSQQGHLERTY++MLQ+VK LEGTLADYNLAVDKARTTADPGEVTKYLHDLED+NR Sbjct: 69 QGMSGMKTAGXXXXXXXXXXRQVQDGSFFIGVLRSKMNDVRAELGRLQAEIDRHEKSVSQQGHLERTYDTMLQDVKALEGTLADYNLAVDKARTTADPGEVTKYLHDLEDRNR 181
BLAST of mRNA_L-elsbetiae_contig15950.4107.1 vs. uniprot
Match: A0A6H5JUN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN2_9PHAE) HSP 1 Score: 144 bits (364), Expect = 6.810e-39 Identity = 86/144 (59.72%), Postives = 94/144 (65.28%), Query Frame = 1 Query: 7 MSGMKTAGGGGIG---RQVQDASFFIGVLRGKMNDVRAEVGRLRTEIERHDKDVSQQGHLERTYESMLQE-----------------------------------VKTLEGTLADYNLAVDKARTTADPGEVTKYLHDLEDQNR 324 MSGMKTA RQVQD SFFIGVLR KMNDVRAE+GRL+ EI+RH+K VSQQGHLERTY++MLQE VK LEGTLADYNLAVDKARTTADP E+TKYLHDLED+NR Sbjct: 1 MSGMKTAAXXXXXXXXRQVQDGSFFIGVLRSKMNDVRAELGRLQAEIDRHEKSVSQQGHLERTYDTMLQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVKALEGTLADYNLAVDKARTTADPSEITKYLHDLEDRNR 144
BLAST of mRNA_L-elsbetiae_contig15950.4107.1 vs. uniprot
Match: A0A836CE00_9STRA (Intraflagellar transport protein 74 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE00_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.880e-35 Identity = 71/108 (65.74%), Postives = 87/108 (80.56%), Query Frame = 1 Query: 1 QGMSGMKTAGGGGIGRQVQDASFFIGVLRGKMNDVRAEVGRLRTEIERHDKDVSQQGHLERTYESMLQEVKTLEGTLADYNLAVDKARTTADPGEVTKYLHDLEDQNR 324 QGMSGM+T+ G G GR VQD SFF+G LR K+ D++ E+ +L+ E E+H KD SQ G LERTYE++L EVK LEGTLAD+NLA+DKARTTADPGEV YL +LED+NR Sbjct: 59 QGMSGMRTSQGAGPGRLVQDGSFFLGQLRQKIMDIQRELAKLKAEGEQHTKDSSQYGGLERTYETLLAEVKNLEGTLADHNLAMDKARTTADPGEVVAYLSELEDRNR 166
BLAST of mRNA_L-elsbetiae_contig15950.4107.1 vs. uniprot
Match: A0A6V2XWW9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XWW9_HETAK) HSP 1 Score: 111 bits (278), Expect = 2.150e-26 Identity = 61/108 (56.48%), Postives = 76/108 (70.37%), Query Frame = 1 Query: 1 QGMSGMKTAGGGGIGRQVQDASFFIGVLRGKMNDVRAEVGRLRTEIERHDKDVSQQGHLERTYESMLQEVKTLEGTLADYNLAVDKARTTADPGEVTKYLHDLEDQNR 324 QGMSGMKTAG G GRQVQD S++IGVLR K+ ++ E+ +L+ EI +H D +Q LER YE +L+EV+ LEGTLADYNLA+DK R DP EV Y L +NR Sbjct: 72 QGMSGMKTAG-QGPGRQVQDPSYYIGVLRAKLTEIATEISKLKREINQHQTDSAQYSGLERKYEELLKEVRNLEGTLADYNLAMDKVRMHTDPTEVEAYQKQLAAKNR 178
BLAST of mRNA_L-elsbetiae_contig15950.4107.1 vs. uniprot
Match: A0A7S2XUU4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUU4_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 2.770e-23 Identity = 50/88 (56.82%), Postives = 65/88 (73.86%), Query Frame = 1 Query: 1 QGMSGMKTAGGGGIGRQVQDASFFIGVLRGKMNDVRAEVGRLRTEIERHDKDVSQQGHLERTYESMLQEVKTLEGTLADYNLAVDKAR 264 QGM GM+TAG G GRQVQD S++IGVLR KM ++ E+ RLR E ++H+ D ER YE++L+EV+ LEG LADYNLA+DK+R Sbjct: 24 QGMRGMRTAGPQGPGRQVQDPSYYIGVLRAKMAEITKEIERLRQETDQHNTDQQSYSQYERKYETLLKEVRQLEGNLADYNLAMDKSR 111
BLAST of mRNA_L-elsbetiae_contig15950.4107.1 vs. uniprot
Match: F0YK18_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK18_AURAN) HSP 1 Score: 94.7 bits (234), Expect = 3.150e-22 Identity = 49/109 (44.95%), Postives = 79/109 (72.48%), Query Frame = 1 Query: 1 QGMSGMKTAGGGGIGRQVQDASFFIGVLRGKMNDVRAEVGRLRTEIERHDKDVSQQGHLERTYESMLQEVKTLEGTLADYNLAVDKARTTA-DPGEVTKYLHDLEDQNR 324 QGM GMKTA G RQVQD+S+++G+LR K+ ++ E+ L++E ++H++ +++ G L++ +E++L EV+ LEGTLADYNLA+DKAR DP E+ Y+ + +N+ Sbjct: 25 QGMRGMKTA--QGPARQVQDSSYYVGILRSKVTELMNEIQSLQSEHKQHERSMNEYGGLQKRHENLLNEVRALEGTLADYNLAMDKARMVGTDPAELNDYITEFRAKNK 131
BLAST of mRNA_L-elsbetiae_contig15950.4107.1 vs. uniprot
Match: A0A7S2FT10_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FT10_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 9.330e-22 Identity = 50/108 (46.30%), Postives = 75/108 (69.44%), Query Frame = 1 Query: 1 QGMSGMKTAGGGGIGRQVQDASFFIGVLRGKMNDVRAEVGRLRTEIERHDKDVSQQGHLERTYESMLQEVKTLEGTLADYNLAVDKARTTADPGEVTKYLHDLEDQNR 324 QGM GMK++ GGG GR VQD++FF+GVLR K+N++ AE+ +L E + H D S + E++ +EV+TLEGTLADYN+A+DK R +D E+ Y+ + + +N+ Sbjct: 95 QGMRGMKSSAGGG-GRLVQDSTFFVGVLRNKVNEITAEIEKLEGEAKTHMSDQSNHSRMNNKAEALDKEVRTLEGTLADYNIAMDKQRQGSDVAELHGYIREYDARNK 201
BLAST of mRNA_L-elsbetiae_contig15950.4107.1 vs. uniprot
Match: A0A8K1CE55_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CE55_PYTOL) HSP 1 Score: 97.4 bits (241), Expect = 2.360e-21 Identity = 55/107 (51.40%), Postives = 72/107 (67.29%), Query Frame = 1 Query: 1 QGMSGMKTAGGGGIGRQVQDASFFIGVLRGKMNDVRAEVGRLRTEIERHDKDVSQQGHLERTYESMLQEVKTLEGTLADYNLAVDKARTTADPGEVTKYLHDLEDQN 321 QGM GM+ G G GRQVQDASFF+G L K +++ E+ +LR EIE+ KD SQ LER YE++ EV+ LEG LADYNLA+DK R+ DP E+ + L ++N Sbjct: 87 QGMMGMRV-GTAGPGRQVQDASFFMGKLHAKTSEITTEIEKLRKEIEQDAKDKSQYAQLERKYETLAIEVRDLEGQLADYNLAMDKLRSATDPQEIRQVQEQLRNRN 192
BLAST of mRNA_L-elsbetiae_contig15950.4107.1 vs. uniprot
Match: A0A7S3HDQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HDQ6_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 2.960e-21 Identity = 53/108 (49.07%), Postives = 77/108 (71.30%), Query Frame = 1 Query: 1 QGMSGMKTAGGGGIGRQVQDASFFIGVLRGKMNDVRAEVGRLRTEIERHDKDVSQQGHLERTYESMLQEVKTLEGTLADYNLAVDKARTTADPGEVTKYLHDLEDQNR 324 QG+ GMK A GG GR VQD+++F+G+LR K+NDV E RLR E+++ +D SQ LE+ YE++++ +TLEG LADYNLA+DK RT+ DP +V + + ++NR Sbjct: 65 QGVKGMK-AQGGNTGRLVQDSAYFVGLLRKKINDVNTESMRLRQEMDQQSRDNSQYVQLEKRYENLVKNKETLEGQLADYNLALDKTRTSTDPEDVQQMALHMAEKNR 171
BLAST of mRNA_L-elsbetiae_contig15950.4107.1 vs. uniprot
Match: A0A8J2SUY1_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SUY1_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 4.200e-21 Identity = 49/108 (45.37%), Postives = 78/108 (72.22%), Query Frame = 1 Query: 1 QGMSGMKTAGGGGIGRQVQDASFFIGVLRGKMNDVRAEVGRLRTEIERHDKDVSQQGHLERTYESMLQEVKTLEGTLADYNLAVDKARTTADPGEVTKYLHDLEDQNR 324 QGM GMKT G R+VQD+S+++GVLR K+ ++ E+ L+TE ++H++ V++ G L++ ++S+L V+ LEGTLADYNLA+DKAR + DP E+ +Y+ +N+ Sbjct: 40 QGMRGMKTT--HGPARKVQDSSYYVGVLRNKVTELTTEIYSLQTEHKQHERSVNEHGGLQKHHDSLLNRVRILEGTLADYNLALDKARVSTDPVELDEYISGFRAKNK 145 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15950.4107.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15950.4107.1 >prot_L-elsbetiae_contig15950.4107.1 ID=prot_L-elsbetiae_contig15950.4107.1|Name=mRNA_L-elsbetiae_contig15950.4107.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=107bp MSGMKTAGGGGIGRQVQDASFFIGVLRGKMNDVRAEVGRLRTEIERHDKDback to top mRNA from alignment at L-elsbetiae_contig15950:2003..2913+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15950.4107.1 ID=mRNA_L-elsbetiae_contig15950.4107.1|Name=mRNA_L-elsbetiae_contig15950.4107.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=911bp|location=Sequence derived from alignment at L-elsbetiae_contig15950:2003..2913+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15950:2003..2913+ >mRNA_L-elsbetiae_contig15950.4107.1 ID=mRNA_L-elsbetiae_contig15950.4107.1|Name=mRNA_L-elsbetiae_contig15950.4107.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=642bp|location=Sequence derived from alignment at L-elsbetiae_contig15950:2003..2913+ (Laminarionema elsbetiae ELsaHSoW15)back to top |