mRNA_L-elsbetiae_contig15922.4091.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig15922.4091.1
Unique NamemRNA_L-elsbetiae_contig15922.4091.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig15922.4091.1 vs. uniprot
Match: A0A2U3CBW8_HEIAB (Carrier domain-containing protein n=1 Tax=Heimdallarchaeota archaeon (strain B3-JM-08) TaxID=2012493 RepID=A0A2U3CBW8_HEIAB)

HSP 1 Score: 139 bits (349), Expect = 1.400e-41
Identity = 68/74 (91.89%), Postives = 70/74 (94.59%), Query Frame = 1
Query:    1 MKNALRKIFKEHLIQNNINDTSNFFDLGGDSLSVVLLLIKVEKETGIKIQNEQFYAEPTINGLTEICEKENKNK 222
            MKN LR IFKEHL QNNINDTSNFFDLGGDSLS VLLLIKVEKETGIKIQNEQFYAEPTINGLTEICEK+N+NK
Sbjct:    1 MKNVLRNIFKEHLSQNNINDTSNFFDLGGDSLSAVLLLIKVEKETGIKIQNEQFYAEPTINGLTEICEKKNENK 74          
BLAST of mRNA_L-elsbetiae_contig15922.4091.1 vs. uniprot
Match: A0A1V4Z1G5_9EURY (Acetyl-coenzyme A synthetase n=1 Tax=Methanobacterium sp. PtaU1.Bin242 TaxID=1811676 RepID=A0A1V4Z1G5_9EURY)

HSP 1 Score: 56.2 bits (134), Expect = 1.980e-7
Identity = 29/65 (44.62%), Postives = 42/65 (64.62%), Query Frame = 1
Query:   13 LRKIFKEHLIQNNINDTSNFFDLGGDSLSVVLLLIKVEKETGIKIQNEQFYAEPTINGLTEICEK 207
            L +I+KE L    +    NFFDLGG+SL+++ LL +V +ETGI+I     +  PTI G+TE  +K
Sbjct:  837 LVEIWKEVLGVKKVGIEDNFFDLGGNSLTIINLLSRVLEETGIEIPIRPIFEHPTIKGITENMQK 901          
BLAST of mRNA_L-elsbetiae_contig15922.4091.1 vs. uniprot
Match: UPI001E3D7235 (non-ribosomal peptide synthetase n=1 Tax=Paenibacillus sp. 481 TaxID=2835869 RepID=UPI001E3D7235)

HSP 1 Score: 55.8 bits (133), Expect = 2.680e-7
Identity = 28/58 (48.28%), Postives = 36/58 (62.07%), Query Frame = 1
Query:   22 IFKEHLIQNNINDTSNFFDLGGDSLSVVLLLIKVEKETGIKIQNEQFYAEPTINGLTE 195
            I+KE L   NI  TSN+FD GGDS+ V+ L+ ++ KE  + IQ    Y  PTI GL E
Sbjct:  560 IWKESLHNPNIGVTSNYFDYGGDSIRVIELISRMNKELAMNIQIVDLYKHPTIKGLIE 617          
BLAST of mRNA_L-elsbetiae_contig15922.4091.1 vs. uniprot
Match: A0A841D2Y2_PLAVE (Acyl carrier protein n=4 Tax=Streptosporangiaceae TaxID=2004 RepID=A0A841D2Y2_PLAVE)

HSP 1 Score: 52.4 bits (124), Expect = 2.810e-7
Identity = 22/66 (33.33%), Postives = 44/66 (66.67%), Query Frame = 1
Query:    1 MKNALRKIFKEHLIQNNINDTSNFFDLGGDSLSVVLLLIKVEKETGIKIQNEQFYAEPTINGLTEI 198
            + + +R+I++E L  + I D  + FDLGG SL++  +++++ K  G++++ + F+  PTI G+ EI
Sbjct:    7 LTDQVREIWEEVLGISPIGDHDDVFDLGGHSLTITQIIVRMRKRLGVEVELDDFFDNPTIAGIVEI 72          
BLAST of mRNA_L-elsbetiae_contig15922.4091.1 vs. uniprot
Match: UPI000D0F87DB (non-ribosomal peptide synthetase n=1 Tax=Aquimarina sp. Aq78 TaxID=1191889 RepID=UPI000D0F87DB)

HSP 1 Score: 55.5 bits (132), Expect = 3.750e-7
Identity = 30/74 (40.54%), Postives = 48/74 (64.86%), Query Frame = 1
Query:   13 LRKIFKEHLIQNNINDTSNFFDLGGDSLSVVLLLIKVEKETGIKIQNEQFYAEPTINGLTEICE----KENKNK 222
            L +I+K HL  + I  T ++F +GGDS++++ L+ +V K+  I I+  QFYA PTI GL+++       E+KNK
Sbjct: 1052 LVEIWKNHLDLDTIGITDDYFRVGGDSITMIRLMSEVNKKFKIDIKIAQFYANPTIKGLSKLLGTCGLSESKNK 1125          
BLAST of mRNA_L-elsbetiae_contig15922.4091.1 vs. uniprot
Match: A0A7X0E241_9SPHI (Amino acid adenylation domain-containing protein n=1 Tax=Mucilaginibacter sp. FT3.2 TaxID=2723090 RepID=A0A7X0E241_9SPHI)

HSP 1 Score: 54.3 bits (129), Expect = 9.450e-7
Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 1
Query:    4 KNALRKIFKEHLIQNNINDTSNFFDLGGDSLSVVLLLIKVEKETGIKIQNEQFYAEPTINGLTEICEKENKN 219
            +N L +I+KE+  +N ++ TSNFF++GG SL  V +L K++K T    Q    Y  PTI  L+   + E +N
Sbjct:  800 ENTLLEIWKEYFKRNELDVTSNFFEIGGHSLMAVQILSKLKKITQKSFQISALYEYPTIRMLSMFIDSERRN 871          
BLAST of mRNA_L-elsbetiae_contig15922.4091.1 vs. uniprot
Match: A0A1M6XDI4_9FLAO (Amino acid adenylation domain-containing protein n=1 Tax=Flavobacterium chilense TaxID=946677 RepID=A0A1M6XDI4_9FLAO)

HSP 1 Score: 54.3 bits (129), Expect = 9.620e-7
Identity = 29/67 (43.28%), Postives = 41/67 (61.19%), Query Frame = 1
Query:   13 LRKIFKEHLIQNNINDTSNFFDLGGDSLSVVLLLIKVEKETGIKIQNEQFYAEPTINGLTEICEKEN 213
            L KI++E L    +  T NFF+LGG SL +V ++ K  KE G  I  + F+A PTI GL++I  + N
Sbjct: 1024 LVKIWEEVLNVEKVGITDNFFELGGHSLIIVQIINKTFKELGKSISFKDFFANPTIKGLSKIMYESN 1090          
BLAST of mRNA_L-elsbetiae_contig15922.4091.1 vs. uniprot
Match: UPI001FD82EB1 (phosphopantetheine-binding protein n=1 Tax=Micromonospora sp. HB375 TaxID=767364 RepID=UPI001FD82EB1)

HSP 1 Score: 50.8 bits (120), Expect = 1.360e-6
Identity = 25/71 (35.21%), Postives = 42/71 (59.15%), Query Frame = 1
Query:   10 ALRKIFKEHLIQNNINDTSNFFDLGGDSLSVVLLLIKVEKETGIKIQNEQFYAEPTINGLTEICEKENKNK 222
             +R  + E L   +  DT NFFDLGG+SLS VLL+ ++E+   +++  +  + E T+  +T  C  E +N+
Sbjct:   14 TVRSAWLEVLELTDCGDTDNFFDLGGNSLSAVLLVAQLEERLQVEVPLDAIFFEGTLAAVTAACAGELQNR 84          
BLAST of mRNA_L-elsbetiae_contig15922.4091.1 vs. uniprot
Match: A0A0W0VXG4_9GAMM (Non-ribosomal peptide synthetase n=2 Tax=Legionella maceachernii TaxID=466 RepID=A0A0W0VXG4_9GAMM)

HSP 1 Score: 53.1 bits (126), Expect = 2.410e-6
Identity = 28/66 (42.42%), Postives = 40/66 (60.61%), Query Frame = 1
Query:    1 MKNALRKIFKEHLIQNNINDTSNFFDLGGDSLSVVLLLIKVEKETGIKIQNEQFYAEPTINGLTEI 198
            M+N L+ I+ E L    I+   NFFDLGG+SLS + L++K+ K T   IQ +  Y   TI+ L+ I
Sbjct:  544 MENILKTIWSETLNVKEISINDNFFDLGGNSLSAIRLIVKIRKITRKNIQLQDLYNAGTISELSNI 609          
BLAST of mRNA_L-elsbetiae_contig15922.4091.1 vs. uniprot
Match: A0A512BG26_9BACT (Carrier domain-containing protein n=1 Tax=Segetibacter aerophilus TaxID=670293 RepID=A0A512BG26_9BACT)

HSP 1 Score: 53.1 bits (126), Expect = 2.420e-6
Identity = 25/66 (37.88%), Postives = 39/66 (59.09%), Query Frame = 1
Query:   19 KIFKEHLIQNNINDTSNFFDLGGDSLSVVLLLIKVEKETGIKIQNEQFYAEPTINGLTEICEKENK 216
            KI+K++L   NI    NFF LGG S+  V +++++EKETG+K+     +  PTI     +   +NK
Sbjct:  998 KIWKQYLGDKNIGLNDNFFLLGGHSMIAVEVMVRIEKETGVKLPLSSLFKYPTIKTFATLLTTDNK 1063          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15922.4091.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2U3CBW8_HEIAB1.400e-4191.89Carrier domain-containing protein n=1 Tax=Heimdall... [more]
A0A1V4Z1G5_9EURY1.980e-744.62Acetyl-coenzyme A synthetase n=1 Tax=Methanobacter... [more]
UPI001E3D72352.680e-748.28non-ribosomal peptide synthetase n=1 Tax=Paenibaci... [more]
A0A841D2Y2_PLAVE2.810e-733.33Acyl carrier protein n=4 Tax=Streptosporangiaceae ... [more]
UPI000D0F87DB3.750e-740.54non-ribosomal peptide synthetase n=1 Tax=Aquimarin... [more]
A0A7X0E241_9SPHI9.450e-738.89Amino acid adenylation domain-containing protein n... [more]
A0A1M6XDI4_9FLAO9.620e-743.28Amino acid adenylation domain-containing protein n... [more]
UPI001FD82EB11.360e-635.21phosphopantetheine-binding protein n=1 Tax=Micromo... [more]
A0A0W0VXG4_9GAMM2.410e-642.42Non-ribosomal peptide synthetase n=2 Tax=Legionell... [more]
A0A512BG26_9BACT2.420e-637.88Carrier domain-containing protein n=1 Tax=Segetiba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15922contigL-elsbetiae_contig15922:2897..3121 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size225
Cds size225
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815655.0715373-CDS-L-elsbetiae_contig15922:2896..31211622815655.0715373-CDS-L-elsbetiae_contig15922:2896..3121Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15922 2897..3121 -
1691683017.7568142-CDS-L-elsbetiae_contig15922:2896..31211691683017.7568142-CDS-L-elsbetiae_contig15922:2896..3121Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15922 2897..3121 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15922.4091.1prot_L-elsbetiae_contig15922.4091.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig15922 2897..3121 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig15922.4091.1

>prot_L-elsbetiae_contig15922.4091.1 ID=prot_L-elsbetiae_contig15922.4091.1|Name=mRNA_L-elsbetiae_contig15922.4091.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=75bp
MKNALRKIFKEHLIQNNINDTSNFFDLGGDSLSVVLLLIKVEKETGIKIQ
NEQFYAEPTINGLTEICEKENKNK*
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mRNA from alignment at L-elsbetiae_contig15922:2897..3121-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig15922.4091.1 ID=mRNA_L-elsbetiae_contig15922.4091.1|Name=mRNA_L-elsbetiae_contig15922.4091.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=225bp|location=Sequence derived from alignment at L-elsbetiae_contig15922:2897..3121- (Laminarionema elsbetiae ELsaHSoW15)
ATGAAAAACGCGCTTAGGAAGATTTTTAAAGAACATCTAATTCAAAATAA CATTAATGATACCTCGAACTTTTTTGACCTTGGGGGAGATTCACTCTCAG TAGTCTTATTATTAATAAAAGTAGAAAAAGAAACTGGCATTAAAATACAG AATGAGCAGTTTTATGCAGAACCTACGATAAACGGCCTTACAGAAATATG TGAAAAAGAGAACAAAAATAAATAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig15922:2897..3121-

>mRNA_L-elsbetiae_contig15922.4091.1 ID=mRNA_L-elsbetiae_contig15922.4091.1|Name=mRNA_L-elsbetiae_contig15922.4091.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=450bp|location=Sequence derived from alignment at L-elsbetiae_contig15922:2897..3121- (Laminarionema elsbetiae ELsaHSoW15)
ATGAAAAACGCGCTTAGGAAGATTTTTAAAGAACATCTAATTCAAAATAA
CATTAATGATACCTCGAACTTTTTTGACCTTGGGGGAGATTCACTCTCAG
TAGTCTTATTATTAATAAAAGTAGAAAAAGAAACTGGCATTAAAATACAG
AATGAGCAGTTTTATGCAGAACCTACGATAAACGGCCTTACAGAAATATG
TGAAAAAGAGAACAAAAATAAATAAATGAAAAACGCGCTTAGGAAGATTT
TTAAAGAACATCTAATTCAAAATAACATTAATGATACCTCGAACTTTTTT
GACCTTGGGGGAGATTCACTCTCAGTAGTCTTATTATTAATAAAAGTAGA
AAAAGAAACTGGCATTAAAATACAGAATGAGCAGTTTTATGCAGAACCTA
CGATAAACGGCCTTACAGAAATATGTGAAAAAGAGAACAAAAATAAATAA
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