mRNA_L-elsbetiae_contig15896.4072.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15896.4072.1 vs. uniprot
Match: D7FUH9_ECTSI (Importin subunit alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUH9_ECTSI) HSP 1 Score: 207 bits (527), Expect = 1.390e-60 Identity = 164/216 (75.93%), Postives = 179/216 (82.87%), Query Frame = 1 Query: 1 QVLVDTCWALSYLSDGDTDRIQTVVSAGVAGPLIQLLQHGDSNVVTPALRTLGNFVTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVCDSPGVLGGVIDLLTGDAWEVQKEANFVISNVATASNSARIRQLVNLGTIPALCQMLDRADAKVILVSLDAISAILACDNEQDGLPCVQMVDESGGLDRLEQLQEHEN 648 +VLVDTCWALSYLSDG T+RI+TV+S+GVA PL LLQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VCDSPG+LGGVI+LL+GD WEVQKEANFVISNVATAS+++R+RQLVNL IPAL MLDRADAK ILV+LDAISAI A D+E +GLP VQM DESGGLDRLEQLQEHEN Sbjct: 242 EVLVDTCWALSYLSDGTTERIETVISSGVARPLTALLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVCDSPGLLGGVIELLSGDVWEVQKEANFVISNVATASDASRVRQLVNLEAIPALSSMLDRADAKAILVALDAISAIFALDSEDNGLPWVQMFDESGGLDRLEQLQEHEN 457
BLAST of mRNA_L-elsbetiae_contig15896.4072.1 vs. uniprot
Match: A0A7S1B6Y6_9STRA (Importin subunit alpha n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B6Y6_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.490e-27 Identity = 96/215 (44.65%), Postives = 121/215 (56.28%), Query Frame = 1 Query: 4 VLVDTCWALSYLSDGDTDRIQTVVSAGVAGPLIQLLQHGDSNVVTPALRTLGNFVTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVCDSPGVLGGVIDLLTGDAWEVQKEANFVISNVATASNSARIRQLVNLGTIPALCQMLDRADAKVILVSLDAISAILACDNEQDGLPCVQMVDESGGLDRLEQLQEHEN 648 VLVD CWALSYLSDG DRIQ V+ AGV LI +L+ D +TPALRTLGN V+G XXXXXXXXXXXXXXXXXXXXX + S V+ VI + WE +VNLG I ALC ML+ +D K++LV L+AI IL+ E++G ++DE+GG++++E+LQEHEN Sbjct: 298 VLVDVCWALSYLSDGSEDRIQAVIDAGVIPDLITMLESKDVRKITPALRTLGNCVSGNXXXXXXXXXXXXXXXXXXXXXDEKKNIRKESCWLISNIAAGTHNQIDTLVRSTHVMKKVIAACSASEWEXXXXXXXXXXXXXXGGTDNHAEIMVNLGGITALCAMLESSDTKILLVVLEAIEKILSI-GEKNGRGFPSLIDENGGVEKIEKLQEHEN 511
BLAST of mRNA_L-elsbetiae_contig15896.4072.1 vs. uniprot
Match: A0A6G1E8A9_9ORYZ (Importin subunit alpha n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1E8A9_9ORYZ) HSP 1 Score: 114 bits (286), Expect = 5.520e-26 Identity = 68/224 (30.36%), Postives = 105/224 (46.88%), Query Frame = 1 Query: 1 QVLVDTCWALSYLSDGDTDRIQTVVSAGVAGPLIQLLQHGDSNVVTPALRTLGNFVTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-VCDSPGVLGGVIDLLTGDAWEVQKEANFVISNVATASNSARIRQLVNLGTIPALCQMLDRADAKVILVSLDAISAILACDNEQDGLPC------VQMVDESGGLDRLEQLQEHENT 651 ++L D+CWALSYLSDG D+IQ V+ GV L++LL H V+ PALRT+GN VTG + ++ ++ LL ++V+KEA + ISN + +I LV+ G I LC +L+ D+K++ + LD + IL+ + L VQM+D++ GL+++E LQ H+N Sbjct: 258 EILTDSCWALSYLSDGSDDKIQAVIETGVCPRLVELLNHPSPTVLIPALRTVGNIVTGNDAQTQHILDHPQALPCLFNLLTTTQKKSIKREACWTISNITAGTKEQIQAVINANIISPLLHLLQNADFDVKKEAAWAISNATSGGTPDQIEYLVSQGCIKPLCDLLNHKDSKIVSICLDGLDNILSVGEAKKNLGACNINMFVQMIDDAEGLEKIEDLQNHDNV 481
BLAST of mRNA_L-elsbetiae_contig15896.4072.1 vs. uniprot
Match: F0Y3B0_AURAN (IBB domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3B0_AURAN) HSP 1 Score: 112 bits (281), Expect = 2.060e-25 Identity = 73/215 (33.95%), Postives = 92/215 (42.79%), Query Frame = 1 Query: 7 LVDTCWALSYLSDGDTDRIQTVVSAGVAGPLIQLLQHGDSNVVTPALRTLGNFVTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVCDSPGVLGGVIDLLTGDAWEVQKEANFVISNVATASNSARIRQLVNLGTIPALCQMLDRADAKVILVSLDAISAILACDNEQDGLPCVQMVDESGGLDRLEQLQEHENT 651 L+D CWALSYLSDGD RIQ VV G A L LL H VVTPALRTLGN VTG V +L V+ L W+ + + LV G I LC +L A+AK++ V+LDA+ AIL + G+P +VDE+ G+++LE LQ HEN Sbjct: 243 LMDACWALSYLSDGDEARIQCVVDHGAAAALSPLLGHASHKVVTPALRTLGNVVTGNDAQTQAALDAGVLAHVAALLASPRKAIRKETCWLVSNVAAGTPPQIAAVASDAALLKLVVHQLDAGDWDXXXXXXXXXXXXXXGGHKNHVLALVEHGVIKPLCALLATAEAKIVTVALDALEAILKVGHF-GGVPAANLVDEADGVEKLENLQHHENA 456
BLAST of mRNA_L-elsbetiae_contig15896.4072.1 vs. uniprot
Match: A0A8B9UXY3_9AVES (Importin subunit alpha n=2 Tax=Amniota TaxID=32524 RepID=A0A8B9UXY3_9AVES) HSP 1 Score: 112 bits (280), Expect = 3.000e-25 Identity = 72/221 (32.58%), Postives = 108/221 (48.87%), Query Frame = 1 Query: 4 VLVDTCWALSYLSDGDTDRIQTVVSAGVAGPLIQLLQHGDSNVVTPALRTLGNFVTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVCDSPGVLGGVIDLLTGDAWEVQKEANFVISNVATASNSARIRQLVNLGTIPALCQMLDRADAKVILVSLDAISAILACDNEQD-----GL-PCVQMVDESGGLDRLEQLQEHEN 648 VL D CWALSYLSDG D+IQ V+ AGV L++LL H D VV+PALR +GN VTG V D+ + +I++L + +KEA + I+N + ++ +I+ LV LG I LC +L D+K++ V+L+ + IL ++ G+ P +++E+ GLD++E LQ HEN Sbjct: 260 VLADACWALSYLSDGPNDKIQAVIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVWIHFLLCSGNRAQIQT--------------------------VIDAH-IFPALINILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQESKCSGTGINPYCALIEEAYGLDKIEFLQSHEN 453
BLAST of mRNA_L-elsbetiae_contig15896.4072.1 vs. uniprot
Match: A0A0E0JI37_ORYPU (Importin subunit alpha n=2 Tax=Oryza punctata TaxID=4537 RepID=A0A0E0JI37_ORYPU) HSP 1 Score: 112 bits (281), Expect = 3.010e-25 Identity = 70/224 (31.25%), Postives = 102/224 (45.54%), Query Frame = 1 Query: 1 QVLVDTCWALSYLSDGDTDRIQTVVSAGVAGPLIQLLQHGDSNVVTPALRTLGNFVTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-VCDSPGVLGGVIDLLTGDAWEVQKEANFVISNVATASNSARIRQLVNLGTIPALCQMLDRADAKVILVSLDAISAILACDNEQDGLPC------VQMVDESGGLDRLEQLQEHENT 651 ++L D+CWALSYLSDG D+IQ V+ GV L++LL H V+ PALRT+GN VTG + ++ ++ LL ++V+KE + ISN + +I LV+ G I LC +L D+K +L+ L+A+ IL + L V MVDE+ GLD++E LQ H+N Sbjct: 216 EILTDSCWALSYLSDGSNDKIQAVIETGVCPRLVELLSHPSPAVLVPALRTVGNIVTGDDAQTQCIVGHPQALPCLFNLLTTTQKKSVKREACWTISNITAGTKEQIQAVINANIIAPLLHLLQHAEFDVRKEVAWAISNATSGGTHDQIEYLVSQGCIKPLCDLLVHQDSKTVLICLEALDNILRVGEAKKNLGACNMNIFVPMVDEADGLDKIEDLQNHDNV 439
BLAST of mRNA_L-elsbetiae_contig15896.4072.1 vs. uniprot
Match: A0A7L2C103_9PASS (IMA7 protein (Fragment) n=1 Tax=Alaudala cheleensis TaxID=670337 RepID=A0A7L2C103_9PASS) HSP 1 Score: 112 bits (280), Expect = 3.630e-25 Identity = 81/221 (36.65%), Postives = 114/221 (51.58%), Query Frame = 1 Query: 4 VLVDTCWALSYLSDGDTDRIQTVVSAGVAGPLIQLLQHGDSNVVTPALRTLGNFVTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVCDSPGVLGGVIDLLTGDAWEVQKEANFVISNVATASNSARIRQLVNLGTIPALCQMLDRADAKVILVSLDAISAILACDNE---QDGL---PCVQMVDESGGLDRLEQLQEHEN 648 +L D CWALSYLSDG ++IQ VV +GV L++LL H D V +PALR +GN VTG XXXXXXXX V D+ + +I++L + +KEA + I+N + +IR LVNLG I LC +L D+K++LV+L+ + IL + Q G P +++E+ GLD++E LQ HEN Sbjct: 272 LLADACWALSYLSDGPNEKIQAVVDSGVCRRLVELLMHNDYKVASPALRAVGNIVTGDDIQTQVRAGGQLLQGGNSCRGMXXXXXXXXNAGTLFVPALSSQA----VIDA-NIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVNLGCIKPLCDLLTVMDSKIVLVALNGLENILRLGEQEANQSGTGINPYCSLIEEAYGLDKIEFLQSHEN 487
BLAST of mRNA_L-elsbetiae_contig15896.4072.1 vs. uniprot
Match: A0A812VAE4_SYMMI (IMPA1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VAE4_SYMMI) HSP 1 Score: 108 bits (269), Expect = 5.260e-25 Identity = 68/221 (30.77%), Postives = 101/221 (45.70%), Query Frame = 1 Query: 1 QVLVDTCWALSYLSDGDTDRIQTVVSAGVAGPLIQLLQHGDSNVVTPALRTLGNFVTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVCDSPGVLGGVIDLLTGDAWEVQKEANFVISNVATASNSARIRQLVNLGTIPALCQMLDRADAKVILVSLDAISAILA-----CDNEQDGLPCVQMVDESGGLDRLEQLQEHEN 648 + + D CWALSY+SDG DRIQ V+++GVA L++LL V TPALRT+GN VTG + V +I+LL +++QKEA + +SN + + +I +V G + LC +LD D K++ V+L+ I IL P +V E GG++R+E+LQ HE+ Sbjct: 2 ETVTDACWALSYMSDGTNDRIQCVLNSGVAPRLVELLGSSTPAVQTPALRTVGNIVTGDDKQTQFIINLSALTALLWLLEHPKKNIRKESVI------------------NADVFPKLIELLQNAEFDIQKEAAWAVSNATSGGTAQQIIYIVQQGAVGPLCNLLDVKDTKIVTVALEGIENILKTGLQLAQGNAANNPMASLVAEQGGVERIEELQNHEH 204
BLAST of mRNA_L-elsbetiae_contig15896.4072.1 vs. uniprot
Match: A0A7L4NBX9_9AVES (IMA7 protein (Fragment) n=1 Tax=Ceyx cyanopectus TaxID=390723 RepID=A0A7L4NBX9_9AVES) HSP 1 Score: 108 bits (270), Expect = 5.790e-25 Identity = 72/226 (31.86%), Postives = 108/226 (47.79%), Query Frame = 1 Query: 4 VLVDTCWALSYLSDGDTDRIQTVVSAGVAGPLIQLLQHGDSNVVTPALRTLGNFVTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----VCDSPGVLGGVIDLLTGDAWEVQKEANFVISNVATASNSARIRQLVNLGTIPALCQMLDRADAKVILVSLDAISAILAC---DNEQDGL---PCVQMVDESGGLDRLEQLQEHEN 648 VL D CWALSYLSDG D+IQ V+ +GV L++LL H D VV+PALR +GN VTG V D+ + +I++L + +KEA + I+N + +IR LV LG LC +L D+K++ V+L+ + IL +++Q+G+ P +++E+ GLD++E LQ HEN Sbjct: 19 VLADACWALSYLSDGPNDKIQAVIDSGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVSLILLWLLSLFYRLLTNSNRLTTTRNAVWALSNLCRGKNPPPDFSKAVIDA-NIFPILIEILQKAEFRTRKEAAWAITNATSGGTPDQIRYLVALGCTKPLCDLLTVMDSKIVQVALNGLENILRLGEQESKQNGMGINPYCALIEEAYGLDKIEFLQRHEN 243
BLAST of mRNA_L-elsbetiae_contig15896.4072.1 vs. uniprot
Match: A0A3B4EPA0_PYGNA (Importin subunit alpha n=11 Tax=Teleostei TaxID=32443 RepID=A0A3B4EPA0_PYGNA) HSP 1 Score: 109 bits (273), Expect = 2.970e-24 Identity = 76/221 (34.39%), Postives = 112/221 (50.68%), Query Frame = 1 Query: 4 VLVDTCWALSYLSDGDTDRIQTVVSAGVAGPLIQLLQHGDSNVVTPALRTLGNFVTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVCDSPGVLGGVIDLLTGDAWEVQKEANFVISNVATASNSARIRQLVNLGTIPALCQMLDRADAKVILVSLDAISAILACDNEQ-----DGL-PCVQMVDESGGLDRLEQLQEHEN 648 +L D CWALSYLSDG ++IQ V+ +GV L++LL H D V +PALR +GN VTG XXXXXX V D+ + +I++L + +KEA + I+N + +IR LVNLG I LC +L D+K++ V+L+ + IL ++ G+ P +++E+ GLD++E LQ HEN Sbjct: 264 LLADACWALSYLSDGPNEKIQAVIDSGVCRRLVELLMHSDYKVASPALRAVGNIVTGDDIQTQVCVLVSFLMLXXXXXXIAGLDLLT-------------------VIDA-NIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVNLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEAKQNGSGINPYCSLIEEAYGLDKIEFLQSHEN 464 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15896.4072.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15896.4072.1 >prot_L-elsbetiae_contig15896.4072.1 ID=prot_L-elsbetiae_contig15896.4072.1|Name=mRNA_L-elsbetiae_contig15896.4072.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=218bp QVLVDTCWALSYLSDGDTDRIQTVVSAGVAGPLIQLLQHGDSNVVTPALRback to top mRNA from alignment at L-elsbetiae_contig15896:340..2902+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15896.4072.1 ID=mRNA_L-elsbetiae_contig15896.4072.1|Name=mRNA_L-elsbetiae_contig15896.4072.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2563bp|location=Sequence derived from alignment at L-elsbetiae_contig15896:340..2902+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15896:340..2902+ >mRNA_L-elsbetiae_contig15896.4072.1 ID=mRNA_L-elsbetiae_contig15896.4072.1|Name=mRNA_L-elsbetiae_contig15896.4072.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1308bp|location=Sequence derived from alignment at L-elsbetiae_contig15896:340..2902+ (Laminarionema elsbetiae ELsaHSoW15)back to top |