mRNA_L-elsbetiae_contig1582.4049.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1582.4049.1
Unique NamemRNA_L-elsbetiae_contig1582.4049.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1582.4049.1 vs. uniprot
Match: D8LH86_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH86_ECTSI)

HSP 1 Score: 1134 bits (2932), Expect = 0.000e+0
Identity = 678/860 (78.84%), Postives = 702/860 (81.63%), Query Frame = 1
Query:    1 MKNKRKRAEPVIEPVDEAEEVAELEQQVVATAPARGTQPFTESSGNRQPFTALPLSQRTTLGLNGGGFKTMTEIQVAAIPHALAGRDVLGAAKTGSGKTLAFLVPLVEKLYRSRITFGDGLAALVISPTRELSLQIFEVLREFGKHHQLSAGLITGGKKEFREEQTSVIKMNILVATPGRLLQHLEQTPGFDPSLLQVLVLDEADRILDMGFRDQLNSILEYLPPSRQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCRLDKKLDVLLGFIKTHLKSKMIVFFTSCAQVRFAFELLCALQPGMPVMALHGKCKHARRTQIYLDFVRRPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNSGGRALLMVLPSEEEGVLAGLKPKNIPIKRLTINPEKVRMAGSVGKKASALVASDPDKKRLAEKSFTSYVRAIQLMPNKQVFCLSELPLEEYAFSLGLAAVPKVPGLEKALENSSSAG-GKLANGGSGADEGGVENEKQRGEARAKKNVNRSLQRLKEQIKADKLRKRLERESKLEGATKTGAEAVTKKPRITKSPSNDDGSSXXXXXXXSEA-DGGLVLVQKEHPEGGGEHPEGTDPEEGAAVAELLQKAKKKEKKMRITSDGVAAAGVATKRVFDEDGGAVDIISPLQAFAKEAGLPAAKISGASDTTDLPAASEAYVKRIKARLEAVDGDDKARDRERVREKHLKRRLKGKDKEETTGAPTLGGGWSSDSDXXXXXXXXXXXXXXXXXKSSDEGXXXXXXXXXXXXXXXXGGVGD---------QDRSSRGRGKSSGNSRRSSERSLEEQESEVLAMLAARQGK 2547
            MKNKRKRAEPVIE VDEA+EVAELE QVVATAPARGTQPFTES+G+RQPFTALPLSQRTT GL GGGFKTMTEIQVAAIPHALAGRDVLGAAKTGSGKTLAFLVPLVEKLYRSRITFGDGLAALVISPTRELSLQIFEVLREFGKHHQLSAGLITGGKKEFREEQ SVIKMNILVATPGRLLQHLEQTPGFDPSLLQVLVLDEADRILDMGFRDQLNSILEYLPPSRQTMLFSATQTKS+KDLARLSL+KGNVEYVAVRAGKDECATPAKLVQNYVVCRLDKKLDVLLGFIKTHLKSKMIVFFTSCAQVRFAFELLCALQPGMPVMALHGKCKHARRTQIYLDFVRRPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNSGGRALLM+LPSEEEGVLAGLKP NIPIKRLTINPEKVRMAGSVGKKASALVASDPDKKRLAEKSFTSYVRA+QLMPNKQ F LSELPLEEYAFSLGLAA P+VPGLEKAL N  S G G+   GG G              ARAKKNVNRSLQRLKEQIKADKLRKRLER+ KLE A+K   E    K R  K         XXXXXXX    DGGLVLVQ E  EG G    G + EE     EL +K KKK   MRITSDGVAAAGVATKRVFDEDG AVD+ISPLQAFAKE G+P    S ASD   LPAASEAYVKRIKARLEAVDG+DKARDRE     HLKR                         XXXXXXXXXXXXXXXXX    +       X         GG+G          + R+ +  GK S  S+ S+ RSLEEQE EVLA+LAARQ K
Sbjct:    1 MKNKRKRAEPVIEQVDEAQEVAELEAQVVATAPARGTQPFTESTGDRQPFTALPLSQRTTRGLTGGGFKTMTEIQVAAIPHALAGRDVLGAAKTGSGKTLAFLVPLVEKLYRSRITFGDGLAALVISPTRELSLQIFEVLREFGKHHQLSAGLITGGKKEFREEQASVIKMNILVATPGRLLQHLEQTPGFDPSLLQVLVLDEADRILDMGFRDQLNSILEYLPPSRQTMLFSATQTKSIKDLARLSLRKGNVEYVAVRAGKDECATPAKLVQNYVVCRLDKKLDVLLGFIKTHLKSKMIVFFTSCAQVRFAFELLCALQPGMPVMALHGKCKHARRTQIYLDFVRRPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNSGGRALLMMLPSEEEGVLAGLKPNNIPIKRLTINPEKVRMAGSVGKKASALVASDPDKKRLAEKSFTSYVRAVQLMPNKQAFRLSELPLEEYAFSLGLAAAPRVPGLEKALVNIPSGGSGEDKKGGPGXXXXXXXXXXXXXXARAKKNVNRSLQRLKEQIKADKLRKRLERKGKLEEASKASLEPRKTKARAVKXXXXXXXXXXXXXXXXXXXXDGGLVLVQTERSEGVGS---GAELEEDGGAEELQRKRKKK---MRITSDGVAAAGVATKRVFDEDGAAVDVISPLQAFAKETGVPTGSASSASDAASLPAASEAYVKRIKARLEAVDGEDKARDREXXXXXHLKRXX--------XDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGSDANEDDGEXSESSADGDDGGIGSDSSDGEEMPEQRAPKAHGKGSRASKGSTARSLEEQEDEVLAVLAARQRK 846          
BLAST of mRNA_L-elsbetiae_contig1582.4049.1 vs. uniprot
Match: A0A836CCM6_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCM6_9STRA)

HSP 1 Score: 682 bits (1761), Expect = 3.470e-233
Identity = 399/678 (58.85%), Postives = 480/678 (70.80%), Query Frame = 1
Query:   40 PVDEAEEVAELEQQVVATAPARGTQPFTESSGNRQPFTALPLSQRTTLGLNGGGFKTMTEIQVAAIPHALAGRDVLGAAKTGSGKTLAFLVPLVEKLYRSRITFGDGLAALVISPTRELSLQIFEVLREFGKHHQLSAGLITGGKKEFREEQTSVIKMNILVATPGRLLQHLEQTPGFDPSLLQVLVLDEADRILDMGFRDQLNSILEYLPPSRQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCRLDKKLDVLLGFIKTHLKSKMIVFFTSCAQVRFAFELLCALQPGMPVMALHGKCKHARRTQIYLDFVRRPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNSGGRALLMVLPSEEEGVLAGLKPKNIPIKRLTINPEKVRMAGSVGKKASALVASDPDKKRLAEKSFTSYVRAIQLMPNKQVFCLSE-LPLEEYAFSLGLAAVPKVPGLEKALENSSSAGGKLANGGSGADEGGVENEKQRGEARAKKNVNRSLQRLKEQIKADKLRKRLERESKLEGATKTGAEAVTKKPRITKSPSNDDGSSXXXXXXXSEADGG-----LVLVQKEHPEGGGEHPEGTDPEEGAAVAELLQKAKKKEKKMRITSDGVA-AAGVATKRVFDEDGGAVDIISPLQAFA 2052
            PVDE  E+ +LEQ+V+  AP +GTQ    ++G RQ F+ LPLS+RT  GL  G F +MTEIQ A+IPHALAGRDVLGAA TGSGKTLAFLVPL+EKL+R R TFGDGL ALV+SPTREL+LQIFEVLR  G  H LSAGLI GGK++F EEQ  V   NIL+ATPGRLLQHLEQTPGFD S LQVLVLDEADR+LDMGFR+QLNS+L YLP  RQTMLFSATQT+SVKDLARLSL +  VEY++           A+LVQNYVVC L +KLDVL  F+KTH+KSK IVFF+SCAQVRF  ELLCALQPG+P++ALHGK K  +RTQIY D+VR+  AVL ATD+AARGLDFP+VDWVIQ DAPEDA  YIHR GRTARY SGGRALL++LPSEE+G++A L  + IPI RLT+NP+K+R AGSV  +AS+ VA+D DK+RLAEK+F SYVR++QLMP+++ F   E L L  +A SLGL A P++ G   A                      VE E+ R E RAKKNVNRSLQRLKEQI+A++  KR +RE    G +    EA   K     S   + GS        S++D G     LV+  +E P   G+  +G+  +E A  A   +K K KE K RI  +G+A AA  ATK VF+E G  V ++ P   FA
Sbjct:   14 PVDEETELTQLEQRVLNEAPPKGTQ--AAAAGGRQ-FSQLPLSRRTLQGLESGKFDSMTEIQAASIPHALAGRDVLGAASTGSGKTLAFLVPLLEKLHRMRWTFGDGLGALVVSPTRELALQIFEVLRVVGGKHLLSAGLIVGGKRDFTEEQAMVSATNILIATPGRLLQHLEQTPGFDASQLQVLVLDEADRLLDMGFREQLNSVLTYLPLQRQTMLFSATQTRSVKDLARLSLNRDTVEYIS-----------AQLVQNYVVCELRQKLDVLYSFLKTHIKSKTIVFFSSCAQVRFVHELLCALQPGVPLLALHGKLKQQKRTQIYFDYVRKASAVLFATDVAARGLDFPAVDWVIQADAPEDAASYIHRAGRTARYKSGGRALLLLLPSEEKGMVAALSKQKIPITRLTVNPDKMRAAGSVTARASSAVAADADKRRLAEKAFHSYVRSVQLMPDRRTFGGGEGLDLAGFATSLGLPAPPRLKGAVIAAA--------------------VEGEEGREEVRAKKNVNRSLQRLKEQIRAERALKRAQRE----GLSAAAPEAPKAKKTSASSAVLNGGSKSALDDGSSQSDDGSGDDLLVVKSREVP---GDASDGSGADEAADRARSRKK-KAKEPKQRINQEGIAVAAAAATKVVFNEAGEGVRVVDPSDRFA 649          
BLAST of mRNA_L-elsbetiae_contig1582.4049.1 vs. uniprot
Match: K3WGR9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGR9_GLOUD)

HSP 1 Score: 603 bits (1556), Expect = 1.970e-202
Identity = 362/728 (49.73%), Postives = 471/728 (64.70%), Query Frame = 1
Query:   58 EVAELEQQVVATAPARGTQPFTESSGNRQPFTALPLSQRTTLGLNGGGFKTMTEIQVAAIPHALAGRDVLGAAKTGSGKTLAFLVPLVEKLYRSRITFGDGLAALVISPTRELSLQIFEVLREFGKHHQLSAGLITGGKKEFREEQTSVIKMNILVATPGRLLQHLEQTPGFDPSLLQVLVLDEADRILDMGFRDQLNSILEYLPPSRQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCRLDKKLDVLLGFIKTHLKSKMIVFFTSCAQVRFAFELLCALQPGMPVMALHGKCKHARRTQIYLDFVRRPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNSGGRALLMVLPSEEEGVLAGLKPKNIPIKRLTINPEKVRMAGSVGKKASALVASDPDKKRLAEKSFTSYVRAIQLMPNKQVFCLSELPLEEYAFSLGLAAVPKVPGLEKALENSSSAGGKLANGGSGADEGGVENEKQRGEARAKKNVNRSLQRLKEQIKADKLRKRLERESKLEGATKTGAEAVTKKPRITKSPSNDDGSSXXXXXXXSEADGGLVLVQKEHPEGGGEHPEGTDPEEGAAVAEL-LQKAKKKEKKMRITSDGVAAAGVATKRV-FDEDGGAVDIISPLQAFAKEAGLPAAKISGASDTTDLPAASEAYVKRIKARLEAVDGDDKARDRERVREKHLKRRLKGK 2235
            E+ +LEQ++    PARG+Q   E + N   F   PLS+ T  GL    F   T IQ  AIPHALAGRD+L AAKTGSGKTLAFL+P++EKLYRSR    DGL ALVISPTREL+LQIFEVLR  GK H  SAGL+ GGK  F+EEQ  +I+MNIL+ TPGRLLQH+EQT  FDPS LQ+LVLDEADRILDMGF+ QL SI+ YLP  RQTMLFSATQTKSVKDLA+LSL +   EY+AV   K   ATP+ L Q++VVC L++KLDVLL FIK+HLK K IVF ++C QVRF  ++ C LQPG+P++ALHGK K  +R +IY +F+ +P AVL ATDIAARGLDFP VDWV+Q+D PED   YIHRVGRTARYN  G+ALL +LPSE +G+    +   IPIK + +NP K +   S  +K +++VA+D D K L +K+F SYVR++ L PN++VF  S+LPL+E+A S GL   P++P L K  E+                    + E  R E R KKNVNR LQ LK++IKA+K RKRLE++       K  AE   +K          DGS        S++D GL++V++ H        EG          +L   + KKK KK+R+ ++      V+  RV FD++G ++ ++  + A          ++  AS+  D+ A S+ +   + ARL   D +D+  ++ERVR KH K+R+K K
Sbjct:   24 EIEKLEQRIKEQTPARGSQ--LEDAAN---FDFFPLSEATKRGLQRSKFTKPTLIQTGAIPHALAGRDILAAAKTGSGKTLAFLIPILEKLYRSRWDVEDGLGALVISPTRELALQIFEVLRSLGKAHSFSAGLVIGGKN-FKEEQYRLIRMNILICTPGRLLQHMEQTANFDPSNLQILVLDEADRILDMGFQQQLTSIVAYLPTERQTMLFSATQTKSVKDLAKLSLNEP--EYIAVHE-KSAQATPSGLAQSFVVCGLERKLDVLLSFIKSHLKQKTIVFLSTCRQVRFVHQVFCKLQPGVPLLALHGKYKQGKRVEIYYEFLNKPAAVLFATDIAARGLDFPQVDWVVQLDCPEDTANYIHRVGRTARYNKQGKALLTLLPSEVDGMTKAFEDAKIPIKEIKVNPAKTQ---SSRQKVTSVVAADKDIKALGQKAFMSYVRSVYLQPNREVFDASKLPLDEFALSYGLPGAPRMPFLAKMKED--------------------QQEVMREELRGKKNVNRKLQMLKDKIKAEKERKRLEKQLSSLKKDKKQAEVTVEK----------DGSEDE-----SDSDDGLMVVKRRH----NWDKEGXXXXXXXXXXDLDASRKKKKAKKIRVDNE------VSYNRVVFDDEGNSMKVLEKMAAQ---------RLDDASEFADVEAKSKQFQASVAARLREKDAEDRRLEKERVRAKHHKKRMKEK 685          
BLAST of mRNA_L-elsbetiae_contig1582.4049.1 vs. uniprot
Match: W7TN44_9STRA (Atp-dependent rna helicase dbp4 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TN44_9STRA)

HSP 1 Score: 578 bits (1490), Expect = 1.600e-196
Identity = 312/484 (64.46%), Postives = 371/484 (76.65%), Query Frame = 1
Query:   70 LEQQVVATAPARGTQPFTESSGNRQPFTALPLSQRTTLGLNGGGFKTMTEIQVAAIPHALAGRDVLGAAKTGSGKTLAFLVPLVEKLYRSRITFGDGLAALVISPTRELSLQIFEVLREFGKHHQLSAGLITGGKKEFREEQTSVIKMNILVATPGRLLQHLEQTPGFDPSLLQVLVLDEADRILDMGFRDQLNSILEYLPPS--RQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCRLDKKLDVLLGFIKTHLKSKMIVFFTSCAQVRFAFELLCALQPGMPVMALHGKCKHARRTQIYLDFVRRPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNSGGRALLMVLPSEEEGVLAGLKPKNIPIKRLTINPEKVRMAGSVGKKASALVASDPDKKRLAEKSFTSYVRAIQLMPNKQVFCLSELPLEEYAFSLGLAAVPKVPGLEKALE 1515
            L ++VVA APA GTQ F E  G  + F  LPLS+ T  GL+   F  MT+IQ+AA+PHALAGRDVLGAAKTGSGKTLAF+VPL+EKLYR      DGL AL+I+PTREL+LQIFEVLR  GK H  SA L+TGGKKEFREEQ  V +MNI+VATPGRLLQHLE+TPGFD S LQVLVLDEADRILDMGF  QLN+IL YLPP   RQT+LFSATQTKSVKDLARLSL K N EYV V       ATP +LVQNY+V  L  K+D L  FIK+H+K K++VFF+SC+QVR+      ALQPG+P++ALHGK K ARRT IY +FVRRP AVL ATDIAARGLDFP+ DWV+QVDAPED   YIHRVGRTARY SGGR+LL +LPSEE G+L  L+  ++PI R+T+NP K     SV +K +A+VAS+P+ KRLA+K+F SY+R++ LMP K VF +S L +E +A +LGL+  P    L KAL+
Sbjct:    4 LRKRVVAEAPAPGTQLFVEGGGPGKAFRDLPLSRITLQGLDRNKFSAMTDIQLAAVPHALAGRDVLGAAKTGSGKTLAFVVPLLEKLYREGWALSDGLGALIITPTRELALQIFEVLRTVGKGHMFSAALLTGGKKEFREEQARVPRMNIIVATPGRLLQHLEETPGFDASQLQVLVLDEADRILDMGFSRQLNAILAYLPPGAGRQTLLFSATQTKSVKDLARLSLDK-NSEYVGVHDTAAH-ATPDRLVQNYLVAALADKMDTLWAFIKSHMKHKLVVFFSSCSQVRYVHACFRALQPGVPLLALHGKIKQARRTHIYFEFVRRPAAVLFATDIAARGLDFPACDWVVQVDAPEDTAMYIHRVGRTARYRSGGRSLLFLLPSEEGGMLRRLEAAHVPISRVTVNPSKTT---SVRQKTAAVVASNPECKRLAQKAFVSYLRSVALMPLKDVFDISALDVEAFADALGLSKCPSTKFL-KALK 481          
BLAST of mRNA_L-elsbetiae_contig1582.4049.1 vs. uniprot
Match: M4B426_HYAAE (Uncharacterized protein n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B426_HYAAE)

HSP 1 Score: 585 bits (1509), Expect = 2.150e-194
Identity = 356/725 (49.10%), Postives = 468/725 (64.55%), Query Frame = 1
Query:   58 EVAELEQQVVATAPARGTQPFTESSGNRQPFTALPLSQRTTLGLNGGGFKTMTEIQVAAIPHALAGRDVLGAAKTGSGKTLAFLVPLVEKLYRSRITFGDGLAALVISPTRELSLQIFEVLREFGKHHQLSAGLITGGKKEFREEQTSVIKMNILVATPGRLLQHLEQTPGFDPSLLQVLVLDEADRILDMGFRDQLNSILEYLPPS--RQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCRLDKKLDVLLGFIKTHLKSKMIVFFTSCAQVRFAFELLCALQPGMPVMALHGKCKHARRTQIYLDFVRRPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNSGGRALLMVLPSEEEGVLAGLKPKNIPIKRLTINPEKVRMAGSVGKKASALVASDPDKKRLAEKSFTSYVRAIQLMPNKQVFCLSELPLEEYAFSLGLAAVPKVPGLEKALENSSSAGGKLANGGSGADEGGVENEKQRGEARAKKNVNRSLQRLKEQIKADKLRKRLERESKLEGATKTGAEAVTKKPRITKSPSNDDGSSXXXXXXXSEADGGLVLVQKEHPEGGGEHPEGTDPEEGAAVAELLQKAKKKEKKMRITSDGVAAAGVATKRVFDEDGGAVDIISPLQAFAKEAGLPAAKISGASDTTDLPAASEAYVKRIKARLEAVDGDDKARDRERVREKHLKRRL 2226
            E+  LE ++    PARG+Q      G+   F   PLS+ +  GL   GF T T+IQV A+PHALAGRDVL AAKTGSGKTLAFL+P++EKL+R R +  DGL ALVISPTREL+LQIFEVLR  GK H  SAGL+ GGK  FREEQ  +++MN+LV TPGRLLQH+EQTP FD S LQVLVLDEADRILD+GF+ QL +ILE+LPP+  RQTMLFSATQTKSVKDLA LSL++   EYVAV       ATP  L Q+YVV  L++KLDVLL FIK+HLK K IVF ++C QVR+   + C LQPG+P+ ALHGK K  +R ++Y +F+ +P AVL ATDIAARGLDFP VDWV+Q+D PED   YIHRVGRTARYN  G+AL+ ++PSE +G+L  L+   +PI    +NP K     S  +K +++VA D D K LA+K+F SYVR++ L P+++VF  + LPL+ +A SLGL   P++P L K        G                NE  R E R KKNVNR LQ+LKE+IKA+K RKRL R+     AT    E   ++  I K   N + +         ++   L++V++ H           D +E   +  L ++ +KK+K++R+ S+ +  +    K VFDEDG +  I   L          AA+ S +SD T++   ++ Y +++ ARL A D  D+  ++ERVR KH K+R+
Sbjct:   94 EIERLEARITEQTPARGSQ-----LGDATSFDLFPLSENSRRGLRLCGFVTPTKIQVGALPHALAGRDVLAAAKTGSGKTLAFLLPVLEKLFRLRWSVEDGLGALVISPTRELALQIFEVLRNVGKAHTFSAGLVIGGKN-FREEQLRLVRMNLLVCTPGRLLQHMEQTPAFDASNLQVLVLDEADRILDLGFQKQLTAILEHLPPAGARQTMLFSATQTKSVKDLAALSLREP--EYVAVHEHSTN-ATPKGLTQSYVVTPLERKLDVLLSFIKSHLKQKTIVFLSTCRQVRYVHSVFCKLQPGIPLCALHGKYKQGKRVEVYYEFLNKPAAVLFATDIAARGLDFPQVDWVLQLDCPEDTANYIHRVGRTARYNKQGKALMCLVPSEVDGMLKRLEAAKVPISETKLNPAKTT---SCRQKVASVVAGDKDIKALAQKAFMSYVRSVYLQPDREVFDATALPLDAFAESLGLPGAPRMPFLSKMKAEHEKGG----------------NEALRDELRGKKNVNRKLQQLKEKIKAEKARKRLARQL----ATMDPKE---QEEAINKVEMNQEDNELDEVEAEEDS---LMVVKRVH--------NWADDDEPLDLEALDRRKQKKQKRLRVDSEVINTS----KIVFDEDGNSGTIADGL----------AARNSTSSDFTNVEQHAKEYTEQVAARLAAKDAKDRRLEKERVRAKHHKKRM 758          
BLAST of mRNA_L-elsbetiae_contig1582.4049.1 vs. uniprot
Match: A0A1V9YR11_9STRA (ATP-dependent RNA helicase dbp4 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YR11_9STRA)

HSP 1 Score: 581 bits (1498), Expect = 3.960e-194
Identity = 365/727 (50.21%), Postives = 466/727 (64.10%), Query Frame = 1
Query:   49 EAEEVAELEQQVVATAPARGTQPFTESSGNRQPFTALPLSQRTTLGLNGGGFKTMTEIQVAAIPHALAGRDVLGAAKTGSGKTLAFLVPLVEKLYRSRITFGDGLAALVISPTRELSLQIFEVLREFGKHHQLSAGLITGGKKEFREEQTSVIKMNILVATPGRLLQHLEQTPGFDPSLLQVLVLDEADRILDMGFRDQLNSILEYLPPSRQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCRLDKKLDVLLGFIKTHLKSKMIVFFTSCAQVRFAFELLCALQPGMPVMALHGKCKHARRTQIYLDFVRRPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNSGGRALLMVLPSEEEGVLAGLKPKNIPIKRLTINPEKVRMAGSVGKKASALVASDPDKKRLAEKSFTSYVRAIQLMPNKQVFCLSELPLEEYAFSLGLAAVPKVPGLEKALENSSSAGGKLANGGSGADEGGVENEKQRGEARAKKNVNRSLQRLKEQIKADKLRKRLERESKLEGATKTGAEAVTKKPRITKSPSNDDGSSXXXXXXXSEADGGLVLVQKEHPEGGGEHPEGTDPEEGAAVAELLQKAKKKEKKMRITSDGVAAAGVATKRVFDEDGGAVDIISPLQAFAKEAGLPAAKISGASDTTDLPAASEAYVKRIKARLEAVDGDDKARDRERVREKHLKRRLK 2229
            EA+EVA L +++    PARG+Q       + + F  LPLS  T  GL    F   T+IQ+ AIPHALAGRD+L AAKTGSGKTLAFLVPL+EKLYR+R    DGL  LVISPTREL+LQIFEVLR F K H  SAGL+ GGK  F+EEQ  +IKMNIL+ATPGRLLQH+EQTP FD S LQ+LVLDEADRILDMGF  QL SI+ YLPP RQTMLFSATQTKS+KDLARLSL +   EYVAV   K   ATP+ L QNY+VC + +KLDVL  FIK+HLK K IVF ++C QVRF  E+ C +QPG+P+MALHGK K  +RT++Y +F+ +P AV+ ATD+AARGLDFP+VDWV+Q+DAPED   YIHRVGRTARYN  GRAL+ +LPSE +G+LAGL    IPI +L +NP K   A + GK AS +VA+D D K +A+K+F SYVR+I L P K++F    + ++  A S GL   P++P L++A +       + AN                   R KKNVNR LQ LK++IKA+KL KRL            G  A  K               XXXXXXX            +  + G    E  D +  A  A L     KK+ K+R+       A  A+K VFD++G A+   +P + FAK +   +A++       ++ A ++A+  ++ ARL+  D +D+  +++RVR KH KRR+K
Sbjct:   12 EAKEVAVLTERIELETPARGSQ-----MDDVESFDVLPLSMATKNGLKRCKFTKPTKIQIGAIPHALAGRDILAAAKTGSGKTLAFLVPLIEKLYRARWDIEDGLGGLVISPTRELALQIFEVLRGFAKTHTFSAGLVIGGKN-FQEEQYRIIKMNILIATPGRLLQHMEQTPNFDLSNLQMLVLDEADRILDMGFSTQLASIIGYLPPERQTMLFSATQTKSIKDLARLSLCEP--EYVAVHE-KSTTATPSGLTQNYIVCDVGQKLDVLFAFIKSHLKQKTIVFASTCRQVRFVHEVFCKMQPGVPLMALHGKYKQGKRTEVYYNFLNKPAAVMFATDVAARGLDFPNVDWVVQLDAPEDVANYIHRVGRTARYNKNGRALMQLLPSEVDGLLAGLAESKIPITQLKVNPAKT--ASTQGKVAS-IVAADKDLKLMAQKAFMSYVRSIVLQPAKEIFNAEAMDMQALAASYGLPHAPRMPFLKEAAQT------REAN-------------------REKKNVNRKLQALKDKIKAEKLLKRL------------GGAAPAKXXXXXX-------XXXXXXXXXXXXXXXXXXXXXDWSKDGXXXXEAADVDYDATKAAL-----KKKHKIRV------GAAAASKVVFDDEGTAM---TPFERFAKASAQASAELYD-----NVEAKAQAFTAQVAARLQLKDAEDRQLEKDRVRAKHAKRRMK 663          
BLAST of mRNA_L-elsbetiae_contig1582.4049.1 vs. uniprot
Match: A0A6U3TUF8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TUF8_9STRA)

HSP 1 Score: 582 bits (1500), Expect = 3.010e-193
Identity = 373/766 (48.69%), Postives = 482/766 (62.92%), Query Frame = 1
Query:   43 VDEAEEVAELEQQVVATAPARGTQPFTESSGNRQPFTALPLSQRTTLGLNGGGFKT-----MTEIQVAAIPHALAGRDVLGAAKTGSGKTLAFLVPLVEKLYRSRITFGDGLAALVISPTRELSLQIFEVLREFGKHHQLSAGLITGGKKEFREEQTSVIKMNILVATPGRLLQHLEQTPGFDPSLLQVLVLDEADRILDMGFRDQLNSILEYLPPSR------QTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCRLDKKLDVLLGFIKTHLKSKMIVFFTSCAQVRFAFELLCALQPGMPVMALHGKCKHARRTQIYLDFVRRPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNSGGRALLMVLPSEEEGVLAGLKPKNIPIKRLTINPEKVRMAGSVGKKASALVASDPDKKRLAEKSFTSYVRAIQLMPNKQVFCLSELPLEEYAFSLGLAAVPKVPGLEKALENSSSAGGKLANGGSGADEGGVENEKQRGEARAKKNVNRSLQRLKEQIKADKLRKRLERESKLEGATKTGAEAVTKKPRITKSPSNDDGSSXXXXXXXSEADGGLVLVQKEHPEGGGEHPEGTDPEEGAAVAEL-LQKAKKKEKKMRITSDGVAAAGVATKRVFDEDGGAVDIISPLQAFAKEAGLPAAKISGASDTT----------------DLPAASEAYVKRIKARLEAVDGDDKARDRERVREKHLKRRLKGKDKEETTG 2256
            V + +E+  L Q++   +PA G  P  + +     F ALPLS  T  GL+ G F+T     MT+IQ A IPHALAGRD+LGAA+TGSGKTLAFLVPL+E LYRSR T  DG  A+V+SPTREL++Q FEVLR  G HH LSAGL+ GGKKEF  EQ  V + NIL+ATPGRLLQHLEQTP F+   ++VLVLDEADRILDMGFR+Q+  +L+YLP  R      QTMLFSATQTK V DLA LSL K   EYV V   K+  ATP  L Q+Y+V  L+ KLD +  F+K+HL+ K I+FF+SC+QVR  +EL C LQPG+P+MA+HGK    RRTQIY DF+++P AVL ATD+A+RGLDFP+VDWV+Q DAPED + YIHRVGRTARYN+GGR+LL++LPSE+      LK   IPI +L+INP K  +  S   KAS++VAS P    LA+K+F SYVR + LMPNK++F +SEL L+EYA SLGLA+ PK+  L++                           K R E R KKNVN  LQ+LKEQIKA++L++RLER  K        AE   KK +        +   XXXXXXX    GG ++V+K H           D E      E+ L    K +   RI  +G ++AG   +  FD+DG   +  + +    K A +     +G+SD+                 DL  A+E Y+++++ RLEA    DKA ++ER+R KH K+R++ K + E  G
Sbjct:   39 VQQRDEIKILNQRIAEESPASGYAPPLKQN---VAFRALPLSNATLCGLDKGHFETKNYVTMTDIQNACIPHALAGRDILGAARTGSGKTLAFLVPLLESLYRSRYTPMDGPGAIVLSPTRELAVQTFEVLRSIGSHHDLSAGLLVGGKKEFGLEQMRVGRTNILIATPGRLLQHLEQTPNFNVDNVKVLVLDEADRILDMGFRNQMVRLLDYLPAGRKKGGDRQTMLFSATQTKRVADLAALSLDKP--EYVGVH-DKESSATPTSLRQSYIVVPLEHKLDAIFSFLKSHLQRKTIIFFSSCSQVRHTWELFCRLQPGVPLMAIHGKVSQERRTQIYFDFLKKPSAVLFATDVASRGLDFPNVDWVVQADAPEDMDMYIHRVGRTARYNAGGRSLLLLLPSEQVEFERLLKKSKIPIDKLSINPTKTVLVTS---KASSIVASSPQINALAKKAFQSYVRGVHLMPNKEMFVVSELNLDEYATSLGLASTPKMKFLKEV--------------------------KTREELRTKKNVNHKLQKLKEQIKAERLQRRLERLGKK-------AEDEPKKEK-------GNXXXXXXXXXXXXTHGGFLVVKKNH----------GDTETTLEEEEIHLHGPSKSQLPKRIRIEG-SSAGENKRITFDDDGN--EERTTIDELRKRADIT----NGSSDSDENVTKTTTAEENNAQDDLAGANEEYLRQVRKRLEATKEIDKAEEKERIRAKHKKKRIQDKGEMENDG 738          
BLAST of mRNA_L-elsbetiae_contig1582.4049.1 vs. uniprot
Match: A0A8K1C504_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C504_PYTOL)

HSP 1 Score: 574 bits (1480), Expect = 5.020e-191
Identity = 317/556 (57.01%), Postives = 391/556 (70.32%), Query Frame = 1
Query:   58 EVAELEQQVVATAPARGTQPFTESSGNRQPFTALPLSQRTTLGLNGGGFKTMTEIQVAAIPHALAGRDVLGAAKTGSGKTLAFLVPLVEKLYRSRITFGDGLAALVISPTRELSLQIFEVLREFGKHHQLSAGLITGGKKEFREEQTSVIKMNILVATPGRLLQHLEQTPGFDPSLLQVLVLDEADRILDMGFRDQLNSILEYLPPSRQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCRLDKKLDVLLGFIKTHLKSKMIVFFTSCAQVRFAFELLCALQPGMPVMALHGKCKHARRTQIYLDFVRRPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNSGGRALLMVLPSEEEGVLAGLKPKNIPIKRLTINPEKVRMAGSVGKKASALVASDPDKKRLAEKSFTSYVRAIQLMPNKQVFCLSELPLEEYAFSLGLAAVPKVPGLEKALENSSSAGGKLANGGSGADEGGVENEKQRGEARAKKNVNRSLQRLKEQIKADKLRKRLERESKLEGATKTGA 1725
            EV +LE Q+    PARG+Q      G    F A PLS  T  GL   GF   T IQ+  IPHALAGRD+L AAKTGSGKTLAFL+P++EKLYR R    DGL AL+ISPTREL+LQIFEVLR  GK H  SAGL+ GGK  F+EEQ  +I+MNILV TPGRLLQH+EQTP FD + LQ+LVLDEADRILDMGFR+QL SI+ YLP  RQTMLFSATQTKSVKDLA+LSLK+   EY+AV   K   ATP+ L Q+Y+VC L++KLDVL  F+++HLK K+IVF  +C QVR+ + L C LQPG+P+ +LHGK K  +R ++Y +F+ +P  VL ATDIAARGLDFP+VDWV+Q+D PED   YIHRVGRTARYN  G+AL+ +LPSE E +   L    IPIK + +NP K +   S  +K +++VA+D D K LA+K+F SYVR++ LMP K VF  S+LPLEEYA SLGL   P++P LEK                       V++EK R E R+KKNVNR L +LKE+IKA+K +K+L+RE     A K  A
Sbjct:   26 EVEKLEAQIKEQTPARGSQ-----LGEADSFGAFPLSDATKRGLTKCGFTKPTRIQIGTIPHALAGRDILAAAKTGSGKTLAFLIPMLEKLYRLRWDVEDGLGALIISPTRELALQIFEVLRSVGKTHTFSAGLVIGGKN-FKEEQYRLIRMNILVCTPGRLLQHMEQTPDFDAANLQLLVLDEADRILDMGFREQLTSIVSYLPRERQTMLFSATQTKSVKDLAKLSLKEP--EYIAVHE-KSTQATPSGLQQSYIVCPLEQKLDVLFSFLRSHLKQKIIVFLATCRQVRYIYSLFCKLQPGIPLCSLHGKYKQGKRVEVYYEFLNKPACVLFATDIAARGLDFPNVDWVVQLDCPEDTANYIHRVGRTARYNKQGKALMCLLPSESEAMKKHLDDSKIPIKEIKLNPAKTQ---SCRQKVASVVAADKDIKALAQKAFMSYVRSVFLMPLKDVFDASQLPLEEYAVSLGLPGAPRMPFLEKLKTQD------------------VDHEKLRDELRSKKNVNRKLAQLKEKIKAEKAKKKLDRELAAMKADKAAA 551          
BLAST of mRNA_L-elsbetiae_contig1582.4049.1 vs. uniprot
Match: A0A3F2RL58_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RL58_9STRA)

HSP 1 Score: 575 bits (1482), Expect = 5.710e-191
Identity = 360/723 (49.79%), Postives = 465/723 (64.32%), Query Frame = 1
Query:   58 EVAELEQQVVATAPARGTQPFTESSGNRQPFTALPLSQRTTLGLNGGGFKTMTEIQVAAIPHALAGRDVLGAAKTGSGKTLAFLVPLVEKLYRSRITFGDGLAALVISPTRELSLQIFEVLREFGKHHQLSAGLITGGKKEFREEQTSVIKMNILVATPGRLLQHLEQTPGFDPSLLQVLVLDEADRILDMGFRDQLNSILEYLPPS--RQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCRLDKKLDVLLGFIKTHLKSKMIVFFTSCAQVRFAFELLCALQPGMPVMALHGKCKHARRTQIYLDFVRRPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNSGGRALLMVLPSEEEGVLAGLKPKNIPIKRLTINPEKVRMAGSVGKKASALVASDPDKKRLAEKSFTSYVRAIQLMPNKQVFCLSELPLEEYAFSLGLAAVPKVPGLEKALENSSSAGGKLANGGSGADEGGVENEKQRGEARAKKNVNRSLQRLKEQIKADKLRKRLERESKLEGATKTGAEAVTKKPRITKSPSNDDGSSXXXXXXXSEADGGLVLVQKEHPEGGGEHPEGTDPEEGAAVAELLQKAKKKEKKMRITSDGVAAAGVATKRVFDEDGGAVDIISPLQAFAKEAGLPAAKISGASDTTDLPAASEAYVKRIKARLEAVDGDDKARDRERVREKHLKR 2220
            E+  L+ ++    PARG+Q      G    F   PLS+ +  GL   GF   T+IQ+ ++PHALAGRDVL AAKTGSGKTLAFL+P++EKL+R R +  DGL ALVISPTREL+LQIFEVLR  GK H  SAGL+ GGK  FREEQ  +I+MN+L+ TPGRLLQH+EQTP FD S LQVLVLDEADRILD+GF+ QL SILE+LPP+  RQT+LFSATQTKSVKDLA LSL++   EYVAV       ATP  L Q+YVV  L++KLDVLL FIK+HLK K IVF ++C QVRF   + C LQPG+P+ ALHGK K  +R ++Y +F+ +P AVL ATDIAARGLDFP VDWV+Q+D PEDA  YIHRVGRTARYN  G+AL+ ++PSE EG+   L+   +PI+   +NP K     S  +K +++VA D + K LA+K+F SYVR++ L P++ VF  + LPL+ +A SLGL   P++P L K   NS              D+GG  NE  R E R KKNVNR LQ+LKE+IK +K RKRL R+    G  K   EA  K               XXXXXXX        +V++ H           D E+     + L  +KKK+KK+R+  + V A+    K  FDE+G +V +   L          AA+ +G ++  D+   ++ Y +++ ARL A D +D+  +RERVR KH K+
Sbjct:   53 EIERLDTRIAEQTPARGSQ-----LGEASSFDLFPLSEASRRGLRSCGFTAPTKIQIGSLPHALAGRDVLAAAKTGSGKTLAFLLPVLEKLFRMRWSVEDGLGALVISPTRELALQIFEVLRNVGKAHAFSAGLVIGGKN-FREEQIRLIRMNLLICTPGRLLQHMEQTPQFDASNLQVLVLDEADRILDLGFQKQLASILEHLPPAGERQTLLFSATQTKSVKDLAALSLREP--EYVAVHEHSAN-ATPKGLSQSYVVTPLERKLDVLLSFIKSHLKQKTIVFLSTCRQVRFVHSVFCKLQPGIPLCALHGKYKQGKRVEVYYEFLNKPAAVLFATDIAARGLDFPQVDWVLQLDCPEDAANYIHRVGRTARYNKQGKALMCLVPSEVEGMTKRLEDAKVPIRETKLNPTKTT---SCRQKVASVVAGDKEIKSLAQKAFMSYVRSVHLQPHRDVFDATALPLDVFAESLGLPGAPRMPFLSKMQANS--------------DKGG--NEALREELRGKKNVNRKLQQLKEKIKTEKERKRLARQLAALGP-KEQEEAKQKLEXXX---------XXXXXXXXXXXXXXXXVVKRRH---------NWDEEDEPLDLDALGPSKKKQKKLRVDREPVNAS----KLTFDEEGNSVSMADRL----------AARNTGDAEFADVEQHAKQYTEQVAARLAAKDAEDRLLERERVRAKHHKK 714          
BLAST of mRNA_L-elsbetiae_contig1582.4049.1 vs. uniprot
Match: W2QKL7_PHYPN (Uncharacterized protein n=20 Tax=Phytophthora TaxID=4783 RepID=W2QKL7_PHYPN)

HSP 1 Score: 573 bits (1477), Expect = 1.510e-190
Identity = 357/726 (49.17%), Postives = 464/726 (63.91%), Query Frame = 1
Query:   58 EVAELEQQVVATAPARGTQPFTESSGNRQPFTALPLSQRTTLGLNGGGFKTMTEIQVAAIPHALAGRDVLGAAKTGSGKTLAFLVPLVEKLYRSRITFGDGLAALVISPTRELSLQIFEVLREFGKHHQLSAGLITGGKKEFREEQTSVIKMNILVATPGRLLQHLEQTPGFDPSLLQVLVLDEADRILDMGFRDQLNSILEYLPPS--RQTMLFSATQTKSVKDLARLSLKKGNVEYVAVRAGKDECATPAKLVQNYVVCRLDKKLDVLLGFIKTHLKSKMIVFFTSCAQVRFAFELLCALQPGMPVMALHGKCKHARRTQIYLDFVRRPGAVLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNSGGRALLMVLPSEEEGVLAGLKPKNIPIKRLTINPEKVRMAGSVGKKASALVASDPDKKRLAEKSFTSYVRAIQLMPNKQVFCLSELPLEEYAFSLGLAAVPKVPGLEKALENSSSAGGKLANGGSGADEGGVENEKQRGEARAKKNVNRSLQRLKEQIKADKLRKRLERESKLEGATKTGAEAVTKKPRITKSPSNDDGSSXXXXXXXSEADGGLVLVQKEHPEGGGEHPEGTDPEEGAAVAELLQKAKKKEKKMRITSDGVAAAGVATKRVFDEDGGAVDIISPLQAFAKEAGLPAAKISGASDTTDLPAASEAYVKRIKARLEAVDGDDKARDRERVREKHLKRRLK 2229
            E+ +LE ++    PARG+Q      G    F   PLS+ +  GL   GF   T+IQV A+PHALAGRDVL AAKTGSGKTLAFL+P++EKL+R R +  DGL ALVISPTREL+LQIFEVLR  GK H  SAGL+ GGK  FREEQ  +++MN+LV TPGRLLQH+EQTP FD S LQVLVLDEADRILD+GF+ QL SILE+LPP+  RQTMLFSATQTKSVKDLA LSL++   EYVAV       ATP  L Q+YVV  L++KLDVLL FIK+HLK K IVF ++C QVRF   + C LQPG+P+ ALHGK K  +R ++Y +F+ +P AVL ATDIAARGLDFP VDWV+Q+D PEDA  YIHRVGRTARYN  G+AL+ ++PSE +G++  L+   +PI+   +NP K     S  +K +++VA D + K LA+K+F SYVR++ L P+++VF  + LPL+ +A SLGL   P++P L K      + G                NE  R E R KKNVNR LQ+LKE+IKA+K RKRL R+    G  +                       XXXXXXX      L++V++ H           D +E   V + L    KK+KK+R+  + + A+    K VFDE+G +  I   L A          + S  ++  D+   ++ Y +++ ARL A D +D+  ++ERVR KH K+R+K
Sbjct:   40 EIEKLEARIAEQTPARGSQ-----LGEAASFDLFPLSEASRRGLRTCGFTAPTKIQVGALPHALAGRDVLAAAKTGSGKTLAFLLPVLEKLFRLRWSVEDGLGALVISPTRELALQIFEVLRNVGKAHAFSAGLVIGGKN-FREEQLRLVRMNLLVCTPGRLLQHMEQTPAFDASNLQVLVLDEADRILDLGFQKQLTSILEHLPPAGERQTMLFSATQTKSVKDLAALSLREP--EYVAVHEHSAN-ATPKGLQQSYVVTPLERKLDVLLSFIKSHLKQKTIVFLSTCRQVRFVHSVFCKLQPGIPLCALHGKYKQGKRVEVYYEFLNKPAAVLFATDIAARGLDFPQVDWVLQLDCPEDAANYIHRVGRTARYNKQGKALMCLVPSEVDGMMKRLEDAKVPIRETKLNPAKTT---SCRQKVASVVAGDKEIKALAQKAFMSYVRSVYLQPDREVFDATALPLDAFAESLGLPGAPRMPFLSKMKAEHENGG----------------NEALREELRGKKNVNRKLQQLKEKIKAEKERKRLARQLAALGPKEQEXXXXXX-------------XXXXXXXXXXXXXXXLMVVKRVH---------NWDDDEPLDV-DSLGPTTKKQKKLRVDREAINAS----KIVFDEEGNSAKIADRLSA----------RSSAETEFADVEQHAKNYTEQVAARLAAKDEEDRRLEKERVRAKHHKKRMK 700          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1582.4049.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH86_ECTSI0.000e+078.84DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A836CCM6_9STRA3.470e-23358.85DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
K3WGR9_GLOUD1.970e-20249.73Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
W7TN44_9STRA1.600e-19664.46Atp-dependent rna helicase dbp4 n=1 Tax=Nannochlor... [more]
M4B426_HYAAE2.150e-19449.10Uncharacterized protein n=2 Tax=Hyaloperonospora a... [more]
A0A1V9YR11_9STRA3.960e-19450.21ATP-dependent RNA helicase dbp4 n=1 Tax=Achlya hyp... [more]
A0A6U3TUF8_9STRA3.010e-19348.69Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A8K1C504_PYTOL5.020e-19157.01Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3F2RL58_9STRA5.710e-19149.79Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
W2QKL7_PHYPN1.510e-19049.17Uncharacterized protein n=20 Tax=Phytophthora TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1582contigL-elsbetiae_contig1582:8190..17262 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1146.3
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LH86
KEGG koko:K14776
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0031974,GO:0031981,GO:0034641,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360
EggNOG free text desc.box C/D snoRNA binding
EggNOG OGsCOG0513@1,KOG0343@2759
EC3.6.4.13
COG Functional cat.JKL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-24_000970.1
Exons14
Model size2550
Cds size2550
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1582.4049.1prot_L-elsbetiae_contig1582.4049.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1582 8190..17262 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815650.0011501-CDS-L-elsbetiae_contig1582:8189..82991622815650.0011501-CDS-L-elsbetiae_contig1582:8189..8299Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 8190..8299 -
1691683014.3320174-CDS-L-elsbetiae_contig1582:8189..82991691683014.3320174-CDS-L-elsbetiae_contig1582:8189..8299Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 8190..8299 -
1622815650.0136006-CDS-L-elsbetiae_contig1582:8365..86381622815650.0136006-CDS-L-elsbetiae_contig1582:8365..8638Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 8366..8638 -
1691683014.3443706-CDS-L-elsbetiae_contig1582:8365..86381691683014.3443706-CDS-L-elsbetiae_contig1582:8365..8638Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 8366..8638 -
1622815650.0256243-CDS-L-elsbetiae_contig1582:9012..91571622815650.0256243-CDS-L-elsbetiae_contig1582:9012..9157Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 9013..9157 -
1691683014.35258-CDS-L-elsbetiae_contig1582:9012..91571691683014.35258-CDS-L-elsbetiae_contig1582:9012..9157Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 9013..9157 -
1622815650.0373769-CDS-L-elsbetiae_contig1582:10414..107501622815650.0373769-CDS-L-elsbetiae_contig1582:10414..10750Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 10415..10750 -
1691683014.3606539-CDS-L-elsbetiae_contig1582:10414..107501691683014.3606539-CDS-L-elsbetiae_contig1582:10414..10750Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 10415..10750 -
1622815650.0523775-CDS-L-elsbetiae_contig1582:12409..126761622815650.0523775-CDS-L-elsbetiae_contig1582:12409..12676Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 12410..12676 -
1691683014.3687153-CDS-L-elsbetiae_contig1582:12409..126761691683014.3687153-CDS-L-elsbetiae_contig1582:12409..12676Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 12410..12676 -
1622815650.0642126-CDS-L-elsbetiae_contig1582:13003..131321622815650.0642126-CDS-L-elsbetiae_contig1582:13003..13132Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 13004..13132 -
1691683014.3788645-CDS-L-elsbetiae_contig1582:13003..131321691683014.3788645-CDS-L-elsbetiae_contig1582:13003..13132Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 13004..13132 -
1622815650.076987-CDS-L-elsbetiae_contig1582:13475..135861622815650.076987-CDS-L-elsbetiae_contig1582:13475..13586Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 13476..13586 -
1691683014.386883-CDS-L-elsbetiae_contig1582:13475..135861691683014.386883-CDS-L-elsbetiae_contig1582:13475..13586Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 13476..13586 -
1622815650.0868726-CDS-L-elsbetiae_contig1582:13722..137851622815650.0868726-CDS-L-elsbetiae_contig1582:13722..13785Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 13723..13785 -
1691683014.3948948-CDS-L-elsbetiae_contig1582:13722..137851691683014.3948948-CDS-L-elsbetiae_contig1582:13722..13785Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 13723..13785 -
1622815650.0970435-CDS-L-elsbetiae_contig1582:14653..148451622815650.0970435-CDS-L-elsbetiae_contig1582:14653..14845Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 14654..14845 -
1691683014.4046257-CDS-L-elsbetiae_contig1582:14653..148451691683014.4046257-CDS-L-elsbetiae_contig1582:14653..14845Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 14654..14845 -
1622815650.110706-CDS-L-elsbetiae_contig1582:15125..152991622815650.110706-CDS-L-elsbetiae_contig1582:15125..15299Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 15126..15299 -
1691683014.413055-CDS-L-elsbetiae_contig1582:15125..152991691683014.413055-CDS-L-elsbetiae_contig1582:15125..15299Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 15126..15299 -
1622815650.1204093-CDS-L-elsbetiae_contig1582:15751..159101622815650.1204093-CDS-L-elsbetiae_contig1582:15751..15910Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 15752..15910 -
1691683014.421487-CDS-L-elsbetiae_contig1582:15751..159101691683014.421487-CDS-L-elsbetiae_contig1582:15751..15910Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 15752..15910 -
1622815650.1338394-CDS-L-elsbetiae_contig1582:16187..164251622815650.1338394-CDS-L-elsbetiae_contig1582:16187..16425Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 16188..16425 -
1691683014.4297955-CDS-L-elsbetiae_contig1582:16187..164251691683014.4297955-CDS-L-elsbetiae_contig1582:16187..16425Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 16188..16425 -
1622815650.1451867-CDS-L-elsbetiae_contig1582:16696..168241622815650.1451867-CDS-L-elsbetiae_contig1582:16696..16824Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 16697..16824 -
1691683014.4379964-CDS-L-elsbetiae_contig1582:16696..168241691683014.4379964-CDS-L-elsbetiae_contig1582:16696..16824Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 16697..16824 -
1622815650.1554706-CDS-L-elsbetiae_contig1582:17037..172621622815650.1554706-CDS-L-elsbetiae_contig1582:17037..17262Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 17038..17262 -
1691683014.446145-CDS-L-elsbetiae_contig1582:17037..172621691683014.446145-CDS-L-elsbetiae_contig1582:17037..17262Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1582 17038..17262 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1582.4049.1

>prot_L-elsbetiae_contig1582.4049.1 ID=prot_L-elsbetiae_contig1582.4049.1|Name=mRNA_L-elsbetiae_contig1582.4049.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=850bp
MKNKRKRAEPVIEPVDEAEEVAELEQQVVATAPARGTQPFTESSGNRQPF
TALPLSQRTTLGLNGGGFKTMTEIQVAAIPHALAGRDVLGAAKTGSGKTL
AFLVPLVEKLYRSRITFGDGLAALVISPTRELSLQIFEVLREFGKHHQLS
AGLITGGKKEFREEQTSVIKMNILVATPGRLLQHLEQTPGFDPSLLQVLV
LDEADRILDMGFRDQLNSILEYLPPSRQTMLFSATQTKSVKDLARLSLKK
GNVEYVAVRAGKDECATPAKLVQNYVVCRLDKKLDVLLGFIKTHLKSKMI
VFFTSCAQVRFAFELLCALQPGMPVMALHGKCKHARRTQIYLDFVRRPGA
VLLATDIAARGLDFPSVDWVIQVDAPEDAEGYIHRVGRTARYNSGGRALL
MVLPSEEEGVLAGLKPKNIPIKRLTINPEKVRMAGSVGKKASALVASDPD
KKRLAEKSFTSYVRAIQLMPNKQVFCLSELPLEEYAFSLGLAAVPKVPGL
EKALENSSSAGGKLANGGSGADEGGVENEKQRGEARAKKNVNRSLQRLKE
QIKADKLRKRLERESKLEGATKTGAEAVTKKPRITKSPSNDDGSSDSEDS
DSSEADGGLVLVQKEHPEGGGEHPEGTDPEEGAAVAELLQKAKKKEKKMR
ITSDGVAAAGVATKRVFDEDGGAVDIISPLQAFAKEAGLPAAKISGASDT
TDLPAASEAYVKRIKARLEAVDGDDKARDRERVREKHLKRRLKGKDKEET
TGAPTLGGGWSSDSDDAESDGDSDGSGDDDDDKSSDEGDEGDEGDDGDGS
ESSDGGVGDQDRSSRGRGKSSGNSRRSSERSLEEQESEVLAMLAARQGK*
back to top

mRNA from alignment at L-elsbetiae_contig1582:8190..17262-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1582.4049.1 ID=mRNA_L-elsbetiae_contig1582.4049.1|Name=mRNA_L-elsbetiae_contig1582.4049.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9073bp|location=Sequence derived from alignment at L-elsbetiae_contig1582:8190..17262- (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGAACAAGCGCAAGCGTGCCGAACCAGTAATTGAACCTGTGGATGA AGCCGAGGAGGTCGCCGAGCTTGAGCAGCAAGTGGTGGCCACGGCACCCG CGCGTGGAACACAGCCCTTCACGGAGTCCAGTGGAAACCGTCAGCCATTC ACCGCCTTGCCGCTGTCACAGCGCACCACGCTAGGGCTCAATGGTGGAGG ATTCAAAACCATGACGGAGATACAGGTCAGTGTTCAGGAAAAACTTGACA GTCCAGTGCTGTCGACAGACTGGCAGATCGATCACCTTGTTGCTTCTGTC CAGAGGCTGATGACCAATGGGACCATGAACGAAGGAGTGATATCTGGTCA TCAAAGAGCTATCTCTGTCTCTCTTCTTCTCACGTGCATGTACGCCAACC CACTTTCCTGCCCACTACAATAATATGGTTACTCAAAGGTCGCCGCCATC CCGCACGCTCTGGCTGGACGAGACGTGCTGGGTGCAGCGAAGACGGGATC CGGAAAGACTCTAGCGTTCCTGGTTCCTCTCGTGGAAAAGCTTTACCGCA GCCGAATCACGTTTGGGTGAGATTTTCTTGCTGGTTCGCTCACATAAATC AGTGTTTTTAATTGGTGCGGGCGCCAATTTACAGTCGGGCGTTTTCGTTA ATTTAGGCGTTTTGCAGTCGATGCTTTACCTAGATATATCCTCCTGTATT TGTTTCCGCAATTCGTGCTTAGAGCCGATGCTACCTCGGTCCAAAATAGC TTCGGACGCCGGCGCGTTCCGTAGCATCACGAGCCGCCCCTTGGTGCTCG CTCCTTCCCCCTCTACTTTCTTTCGTGCGTGGTCCAGAGACGGCCTAGCA GCGCTGGTGATATCTCCTACGAGAGAGCTGTCCCTCCAGATCTTCGAGGT GCTGCGCGAGTTTGGGAAGCACCACCAGCTGTCGGCCGGGTTGATTACCG GAGGCAAGAAGGAGTTCCGCGAGGAGCAGACGTCGGTCATAAAGATGAAC ATCCTCGTGGCGACCCCGGGACGGCTACTCCAGCACCTGGAGCAGACGCC AGGGTTCGACCCGTCCTTGTTGCAGGTATGTAGACTAGGACGGGATGTAT TGCATTGACAATGTTTTTCACGGCCCTTGTGCCGCGCACTAGTGGCTGGA GGCGTTTGCATGGGCTGCACGCCCTACGCCGGTGCCGATTTACTTCCGCA GAAGATAGGAGTCTCACACACAGCAGGTAGTTACTTTGCTGTAGCCAACC CGGGTATTTATACGAGTGTCGCGATCATATTCAGACCGAAATATCTACCA TGCTTTCATCCGGGAACTCCTCGTGACCCCGATGTGCGGTGTGGGGTGGC AGGTGTTGGTGTTGGACGAAGCTGACAGGATCTTGGACATGGGCTTTCGA GACCAGTTAAACAGTATCCTCGAGTACCTTCCGCCTTCCCGGCAAACGAT GCTCTTCAGCGCTACCCAGACCAAGTCCGTCAAGGATCTTGCTAGGCTGT CCTTGAAAAAGGTGAGTTCGAGGCCGAGAGGGCCTACACAAACGTTTTAT TGATCTCCGTCGCGACGATAACCAGAACTCAGTGCCCTTACACGTCGGTG GCTACACCGTGGGGTATCCTGGCATTGGGTGTGGTACGGGAGATTGGCGC GTTGCTCTGAAGGCTGTACGTAGCACACCGGGTGTCGCGCATACGGCGAA CTCTAAACACGTAGGTATCATATATGAGAAGGGAATAGACCACGGGTTGG CTTTTTTGTTCGCATCGTTCTGATGCAGCCTCAATGATGTCGGACGCGAG ATGTGGAGAGGCACTTCGTGATGCTACATACATACATACATACATATCCG TGTGAAAGCGCGCCGCGCCGAAGCCCGCTACTTGTACTGCCGGTCAATCT GGCGTGGTGATCATGCCACTGCTACTGACAATGTCGATGTGCGAACCCGT TCCAACCACACAGGGAAACGTGGAGTACGTGGCTGTTCGTGCCGGCAAGG ACGAGTGCGCGACGCCTGCCAAGCTCGTCCAAAACTACGTCGTTTGCCGA TTGGACAAGAAGCTCGACGTCCTCCTGGGCTTCATCAAGACGCACCTCAA GAGCAAGATGATCGTCTTCTTCACCTCCTGCGCGCAGGTGTGCGGGTTTG TTTCAGCCAGCGTTTTTTTTTGTGCGTCACCCGGCTCTGATTTTGTTCCG GTCGGAGCACTTGGGCGGTACTTATTAAGTAAGGGCTTAGGTCTGATCGT CTGCGCCCGATGAGCACAGCAGTGTTTAAAAAAAAGCTCACCCGTGCCGT CCTCCCCCTGCAAGAATCTCGTGGTGTACGAAAGCGCACTATCCCCGGAC ACCCGGAGCCGTTTTCCTCCGCGCCAAGCACTCTTACTCTACGTTCCTCG TGCACGGGCTCTCCCAGGTTAGGTTTGCCTTTGAGCTCCTGTGCGCCTTG CAGCCGGGCATGCCGGTTATGGCCCTGCATGGCAAGTGCAAGCACGCGCG GAGGACGCAGATCTACCTTGACTTCGTGCGGAGACCAGGGGCGGTTCTGC TGGCGACCGATATTGCTGCAAGGGGCCTTGACTTCCCTTCGGTAGACTGG GTTATCCAGGTGCGCTCCCATCACGTAAATATAAAGCAAACCCGCACTGC GGTGTGTCGTTTTTGTTAGACTGAAGGGTCTGGCTAGCAGCGCGGGGCGG GGGGGGGGGGGGGGCCCCGGGGCCCCTTTTCCCCGATGTGTCGGCCTGGT CTGGTTTAGGCTTTTTTTCACCTTCGAACAGCGNNNNNNNNNNCCCCCAC CAAAATAAAAAACAGGCGCGCGGGTGGGTGGGGTGGTTGTGTTGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCTACGAGC TCCCTTTTCCCTGATGTGTCTGCCTTGTCTAGTTTAGGCTTTTGTATACC TCCGAACAGCGGTCGGGAATTTCTGCCCCTCCATTCCGACCGGTGTCGTC TCTATCTACCTCTCATCTCTCTCTCCCATCGCGTGGGACATGGCAGCAGC CCGAAAGGCGAAGGAGAGAGTAGCGTAGGGGTGTGTGTATGTACGTGTGC CTCAAAAGTGGTGCGTGATGTCTCCCCAGCTCCCCCCTTCGGTCGGTGCT CTCTCTCTGCCTGCTCGAAATATTTGCAGCAAACTGAAAGCTCTGAGCAC AAACTAGATAATAGATACATATATTCGTTGGGTGTATGTGTCACTTAAGG CCGCCGTGACGACTCATCGACCCGGTGAGAGTCTCTGTCCATTATAACAC CCAGCCTTGCTTGTCCATAGTCCGCGCCTTTTTACAGAGCGTAGTACATC GGCGTCCGAAACGTTTCGCATCCAAAATATTCTACTCTCGGTTTAGCCCT TCTTGAATGCTCTCACCTGCCTCGTTTCTCAACCCTCCCTGTCCGTGTCT TCGTCTTGTTTTTGCGGCACCTTCTAGGTCGATGCTCCGGAGGATGCTGA GGGGTACATCCACCGTGTGGGGAGGACCGCCCGTTACAATGTCAGTGTGC AGCCGTGAGGGTTGCTTCTGACTTTGTGGCTTCCTGCACTCCACCCCCAT GTTGTAGCCTCGTAGGTACACGTATGCCTCGTCTTAACTGGTGCATGTTT CGACTCTCTTCGCACTCTTCTCGCAGAGTGGCGGTCGTGCACTGTTGATG GTGCTGCCGTCTGAGGAGGAAGGAGTTCTGGCTGGGCTAAAACCGAAGAA CATCCCAATCAAAAGGCTCACCATCAACCCTGAGAAGGTACGGCGATGTG TTGTTTTGCTGCTTTGCTTTGGTTCCAGGGCCGTGCTCGATGGTCCCTTT GATGAACGGTAACACTGGTTTGATTTCGTTGGTTTGGTTTGGTTTGCTGT GCTGGTCGTTTTGGTGCGACGAAAACCCTTTCCGTCTCAAGAGCAAGTGG TTTTCGTTCAGAGCTGGCTGGTCATCGGTACATAGTACCGTCAACCCCCG GGAACCTCAACGCGAACCCCCCTAACTGAACCCAGCAGTACCCATGTTAT TTTGTGCGTGTCCGATTGTTTCTTGCTTTCATGTCTAAGTTGTTCCCCTC GCATGGCCTTCTTGCATGCTTTGGTAACAGGTGCGGATGGCTGGTTCGGT GGGCAAAAAAGCCTCCGCGCTTGTGGCGTCTGACCCAGACAAGAAACGCC TCGCGGAGAAGTCCTTCACGTCGTACGTCAGGGCCATACAGCTCATGCCT AACAAGCAGGTACATAGATACCAAAAGGCTGGGGCAGAGTTAATGTTGCA CCTGTTCGTCGATTTCCCATGGAAAATACGAGTGAGGCACAACAGCACAA GGGGTACTGGATGGATTTGGCGGACATACTTGCACCTGGCATTCGTGTAT CATCAGTCCGCAGCGCTAAGTCTAAACTTGGATTTTTGTGGCCGTAGCGG TATAACTTCAGCGGGTACCGACTTGACTTTCACCAAAAAATGTATACAGT GACGAGTTTGCGAGACTATACCTTGGTTTCTACCGCTGTTGGACGTTTTT CCCGTGACTTGCTCTCTAACCGCTTGACCACCGCAGGTCTTCTGTCTGTC CGAACTTCCTCTGGAGGAATACGCCTTCTCTCTTGGCCTGGCTGCTGTGC CAAAAGTACCGGGTCTCGAGAAAGCGTTGGAGAACTCGTCCTCTGCCGGA GGCAAGCTAGCAAATGGTGGCAGCGGGGCAGATGAGGGAGGGGTGGAGAA CGAAAAGCAAAGAGGAGAGGCGCGAGCAAAAAAAAACGTGAACCGATCGT TGCAGCGCCTCAAGGAGCAAATCAAGGCGGACAAGCTCCGCAAACGCCTA GAGGTATGTTATGTGTGGTTATTTTTTTGGGAAAACGACGCAATAGGGTA TACCTTGGTAGAACCACGACCTAGCTGGGTACCCTTTTTCAAGAGACATA CACGCGCATTGCTGATTGGCCAGTGCCATTATTGACCCGGTTCTGGCGTC GTTCGCTCATGGGTATACCCTGCTGCGTCTTTCTTTGTCCCAAATTGTAC CCTGCTGCTCCCGACCTGTACCCTCATCAGACGGGAAATTGTCCCGCAGT AAAACTCTTCTGCCCGCTCTGTACGGCACACCAACCACGAGAGCCTTGGC ATAACACCCCGCGTTTGATGTTACCCACGGGACAAACATGGGATAACCGA AGTCGGCGCAAACACGGTGTAACAAACCCGCCATGGCATAAACACCTCGC GTTATGTTACACACACATGGGATATATCAAGTCGAGTCGGCGGACAACAC GGCGTAACAAACCACAGCCATGGCAAAACACCGACACACCGAGCAGCAAA TAACTCATCAAAAAAGGGCCGACGCGTCAGCATCCATCCACGCACACTTC TTCACACACACACATTATTGTATCGAGAAAGTAGGTGCTGCCTGCCGTCA TGAGCTAGCTGTTGCTCTCTCCCATGGTTGATTCACCACCTGTACCACGG GCCTTTTGTGGTTTTGGGAAACAAGTGGTTGTAGCCAATATAAATGGTAG GTCACGCCCCAACGGACACCCCGCCCCCTTCCATGCGCCGGAGTGTGTGG TTTGTGTGTGTGTGGAGTGGAGGGTTCGTGAGGCCATGATGATGCTGGCT GCTTGCTGACGCGTCGGCCCTCTTTTGACGAGTTATTTGCTGCTCGGTGT GTCGGTGTTTTGCCATGGCTGTGGTTTGCTACGCTGTGTTCTGCCCCGAC TTGGGATATCCCACATATGTGTCATGTGTATGTGTGTGTGACTCGACTTG GATATCCCATATGTAGGTATGTGTAACATAACGCGGGGTGTTTTGCCATG GCAGGTTTGTTACGCTGTGTTGTGCGCCGACTCGACTTGAGGATATCCCA TATGTGTGTTTAACATCGCGGGATGGTTAGGCCATGGCTCTCGTGGTTTG TTACGCCGTGTTTGCGCCGACTTCGGTTATCCCATATTTGTCCCGTAGGT AAAATCAAATGCGGGGTGTTATGCCAAGGCTCTCGTGATTGGCGGGCAGA GTTTTACTGCGGGACAATTTCCCGTCTGATCAGGGTACAGGTCGGGAGCA GCAGGGTACAATTTGGGACAAAGAAAGACGCAGCAGGGTATACCCATGGG CGAACGAGGCCAGAACCGGGTCAATGGTGGCGCTGGCCAATCAGCAATGC GCGTGTAATGTCTTTGGAAAAAGGGTACCCAGCTAGGTCGTGATTCTACC AGGGTATATGTACCCTGTTACGTCGTTTTCCCTATATTATTTTTTTTTGT CAGACACGCCGTTGGCACACACCAGCTGTCGCACCACGTAAAATGGTGTG AGAGTGGCTTATTCATTCTTGAAAGTGCCTTCCGAGTCGGAAAAGTTAAA GCACCTGCGCACTTGCTGAGTCACTTTTGGAGTGAGATTACAGACGGCGT GACATACACCTCCATCTTCTAACCTTCCGGTGAATCAATCTCCTTTGCCC TCTTTCGCTCAGCGCGAGTCCAAGCTTGAGGGGGCAACCAAAACTGGAGC TGAAGCCGTCACCAAGAAGCCTCGCATCACCAAGAGCCCCAGCAACGACG ACGGCAGCAGCGACAGCGAAGACTCCGATAGCTCGGAGGCAGACGGTGGC CTGGTTCTCGTTCAAAAAGAGCACCCGGAAGGCGGGGGAGAGCATCCGGA GGGAACCGATCCGGAAGAGGGTGCGGCGGTCGCTGAGCTCTTGCAGAAAG CCAAGAAGAAGGAGAAGAAGATGAGGATTACGAGCGACGGTGTTGCTGCG GCGGGCGTTGCGACGAAGAGGGTCTTCGATGAAGACGGTGGCGCTGTGGT GAGTTCTGCCCTGTGTTCAGTTTTTGCTCCCTGCCCTGATGTGTGCCTGC TATGTACCAATGCTATGTTGTTGCGCGTGAGAGCTTACGACACGCGCCGA GGGATAGGTCGTACAGCCTTGCTCGCCCTACACAGACCGCTTAGCAGTGA CATGACGGTGGAGATTGTCGTTTTGCTCTTATTATGTATGTATGCACGTT GAGATTTTGCAGATCACGGCTTCGATGGTTTATCCAGTTAATATGACGTT TCCCTTTAAAGCTCTGATATCTATTTGACTTGTGTCGAAGGACGATGAGG TGTTGCAGTGGCCAACACAGTAGTCACTACTAGGTACCCCAACGGAGGAA GATGGAAGAGGGAGGGTGCCTGCGCACAGTGGTTTATCTCGGTCAACATT GAAATTTGTTTCCAGTCTCAAAGAAACCGGTTGGGGGATTGAGTTCCTCC CTTGTGAAATATGGACCCTTTATCTCTCTTTCTCTCTCTTTCTCCTTACT GCATATGTAGCTGTCTGCGGGTTTGTTCATGGTGGGGCTAACGGACAGGC TGTAGCTGGAAAAAAATCGAGCAGAGTTGGAAAATGCTGTGTAAAGAGTA GGTTGTGCGGGACGTCTTCCTGCTCTGCCGATTTGTGTGTGTGTGTTTGT TTCACGGTGTTGCTTCCAATTTTGACCTCAAAATGTAGGCAAGCTTATCG TGATGTCCATGATTTGTTTTCTTCGGTTTCGCAGCAGCCCTATCGTTATT GGCTAGCGCTGGCACGCTACGAGAGGGCCGGTCAACGAGTCACCTGCTGA TAGGGCATTACTGAGTGGCATTCGCGTCATCTCCCTCCCACCTTCATGAG GTCATGATAGTTTTTGTAAGGGGGGCGGTGTGTGTGCGCGCGTGCGGCAG CCCCTCGGACGTTTTAGGAGTATCGATACGCGCACCCTGTGACCTATGTT TCTCGTCACCCCCCGTAGTTCTGTCGGGGGTTGCTTTGGCTTGAAGCCTC GCTGGTGATGTCATCCGCCCAAACAGGAAAAAGCAGCAGGTTTCCCCACG CCCCCAAAGGCCTGTCTGCAGTGCGGCGTTCAAACATCGCCTCCCGAGAG GGCCGCACGCGCTTTGTCGAGGTGGAGAGCGATAGGTGGTGTTTGCACGA CGGGATTAATGCAGCAAATAGTGACTATTTATTGTTGAGACACGTTGATG CGCTAAATTAAACCACCCCACGCGCCCTTTGTCCCCCGCGGCTTGTGTTT TGCAGGACATCATCTCGCCGCTGCAGGCTTTCGCTAAGGAGGCCGGTCTC CCGGCGGCAAAGATTTCCGGCGCCAGCGACACAACTGACTTGCCCGCGGC CAGTGAAGCATACGTGAAGAGGATCAAGGCGAGGCTTGAAGCTGTCGACG GTACGTGCGGCGTGGTGCTGCCCTTTTAAGATTTTTTGCCTAGATAGGGG GCACGTCCCCCTGCTGGTTCGTAAACTGCTAAGCTGTTGGTGCGCGCATC GGCGCTGTCTTGCTGAACAATCATAGTGCTGTGGCAGCCTTTTGCTCTCA TTTCATGATCACTCTCTGTCTCTCTTGTTGTGATTTTCACCTCTCAAGAG CGCTCCCAAACTGTGTTGATATTTTCTCTCCCCAGGCCCCACGTAAGTTT TGGAAGAAAAATAACCTTTGATTCATTTTTTCTTTTTATAAATAAAAACT ACGCACGTCTCCACGACGACATGCCTCTTTTTTGACACTCTCCGTGTTGC TTATTTTCCAATAACGTCCCACAGGCGACGACAAGGCGCGCGACCGAGAG CGTGTGCGCGAGAAGCATCTCAAGCGCCGACTCAAGGGCAAGGACAAAGA GGAAACCACGGGAGCCCCCACTCTCGGCGGCGGTTGGTCGTCTGACAGTG ATGATGCTGAAAGCGACGGCGACAGCGATGGCAGCGGTGATGATGACGAC GACAAGAGCAGTGATGAGGGTGATGAGGGTGATGAGGGTGATGACGGCGA CGGGTCGGAATCTTCCGACGGTGGCGTGGGCGACCAAGACCGCAGCAGTG ACGACAATTCGTCCGATAGCGAAGATAGCGCCCAGCGGGGAGTAGGGCCG GAGGCGAAGGGAGGTAGAGGTCGTGGGAAGAGCTCGGGCAACTCTCGGCG CTCTAGCGAACGAAGTTTAGAGGAGCAGGAGAGTGAGGTCCTGGCTATGC TTGCTGCTCGGCAGGGAAAGTGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1582:8190..17262-

>mRNA_L-elsbetiae_contig1582.4049.1 ID=mRNA_L-elsbetiae_contig1582.4049.1|Name=mRNA_L-elsbetiae_contig1582.4049.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5100bp|location=Sequence derived from alignment at L-elsbetiae_contig1582:8190..17262- (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGAACAAGCGCAAGCGTGCCGAACCAGTAATTGAACCTGTGGATGA
AGCCGAGGAGGTCGCCGAGCTTGAGCAGCAAGTGGTGGCCACGGCACCCG
CGCGTGGAACACAGCCCTTCACGGAGTCCAGTGGAAACCGTCAGCCATTC
ACCGCCTTGCCGCTGTCACAGCGCACCACGCTAGGGCTCAATGGTGGAGG
ATTCAAAACCATGACGGAGATACAGATGAAGAACAAGCGCAAGCGTGCCG
AACCAGTAATTGAACCTGTGGATGAAGCCGAGGAGGTCGCCGAGCTTGAG
CAGCAAGTGGTGGCCACGGCACCCGCGCGTGGAACACAGCCCTTCACGGA
GTCCAGTGGAAACCGTCAGCCATTCACCGCCTTGCCGCTGTCACAGCGCA
CCACGCTAGGGCTCAATGGTGGAGGATTCAAAACCATGACGGAGATACAG
GTCGCCGCCATCCCGCACGCTCTGGCTGGACGAGACGTGCTGGGTGCAGC
GAAGACGGGATCCGGAAAGACTCTAGCGTTCCTGGTTCCTCTCGTGGAAA
AGCTTTACCGCAGCCGAATCACGTTTGGGTCGCCGCCATCCCGCACGCTC
TGGCTGGACGAGACGTGCTGGGTGCAGCGAAGACGGGATCCGGAAAGACT
CTAGCGTTCCTGGTTCCTCTCGTGGAAAAGCTTTACCGCAGCCGAATCAC
GTTTGGAGACGGCCTAGCAGCGCTGGTGATATCTCCTACGAGAGAGCTGT
CCCTCCAGATCTTCGAGGTGCTGCGCGAGTTTGGGAAGCACCACCAGCTG
TCGGCCGGGTTGATTACCGGAGGCAAGAAGGAGTTCCGCGAGGAGCAGAC
GTCGGTCATAAAGATGAACATCCTCGTGGCGACCCCGGGACGGCTACTCC
AGCACCTGGAGCAGACGCCAGGGTTCGACCCGTCCTTGTTGCAGAGACGG
CCTAGCAGCGCTGGTGATATCTCCTACGAGAGAGCTGTCCCTCCAGATCT
TCGAGGTGCTGCGCGAGTTTGGGAAGCACCACCAGCTGTCGGCCGGGTTG
ATTACCGGAGGCAAGAAGGAGTTCCGCGAGGAGCAGACGTCGGTCATAAA
GATGAACATCCTCGTGGCGACCCCGGGACGGCTACTCCAGCACCTGGAGC
AGACGCCAGGGTTCGACCCGTCCTTGTTGCAGGTGTTGGTGTTGGACGAA
GCTGACAGGATCTTGGACATGGGCTTTCGAGACCAGTTAAACAGTATCCT
CGAGTACCTTCCGCCTTCCCGGCAAACGATGCTCTTCAGCGCTACCCAGA
CCAAGTCCGTCAAGGATCTTGCTAGGCTGTCCTTGAAAAAGGTGTTGGTG
TTGGACGAAGCTGACAGGATCTTGGACATGGGCTTTCGAGACCAGTTAAA
CAGTATCCTCGAGTACCTTCCGCCTTCCCGGCAAACGATGCTCTTCAGCG
CTACCCAGACCAAGTCCGTCAAGGATCTTGCTAGGCTGTCCTTGAAAAAG
GGAAACGTGGAGTACGTGGCTGTTCGTGCCGGCAAGGACGAGTGCGCGAC
GCCTGCCAAGCTCGTCCAAAACTACGTCGTTTGCCGATTGGACAAGAAGC
TCGACGTCCTCCTGGGCTTCATCAAGACGCACCTCAAGAGCAAGATGATC
GTCTTCTTCACCTCCTGCGCGCAGGGAAACGTGGAGTACGTGGCTGTTCG
TGCCGGCAAGGACGAGTGCGCGACGCCTGCCAAGCTCGTCCAAAACTACG
TCGTTTGCCGATTGGACAAGAAGCTCGACGTCCTCCTGGGCTTCATCAAG
ACGCACCTCAAGAGCAAGATGATCGTCTTCTTCACCTCCTGCGCGCAGGT
TAGGTTTGCCTTTGAGCTCCTGTGCGCCTTGCAGCCGGGCATGCCGGTTA
TGGCCCTGCATGGCAAGTGCAAGCACGCGCGGAGGACGCAGATCTACCTT
GACTTCGTGCGGAGACCAGGGGCGGTTCTGCTGGCGACCGATATTGCTGC
AAGGGGCCTTGACTTCCCTTCGGTAGACTGGGTTATCCAGGTTAGGTTTG
CCTTTGAGCTCCTGTGCGCCTTGCAGCCGGGCATGCCGGTTATGGCCCTG
CATGGCAAGTGCAAGCACGCGCGGAGGACGCAGATCTACCTTGACTTCGT
GCGGAGACCAGGGGCGGTTCTGCTGGCGACCGATATTGCTGCAAGGGGCC
TTGACTTCCCTTCGGTAGACTGGGTTATCCAGGTCGATGCTCCGGAGGAT
GCTGAGGGGTACATCCACCGTGTGGGGAGGACCGCCCGTTACAATGTCGA
TGCTCCGGAGGATGCTGAGGGGTACATCCACCGTGTGGGGAGGACCGCCC
GTTACAATAGTGGCGGTCGTGCACTGTTGATGGTGCTGCCGTCTGAGGAG
GAAGGAGTTCTGGCTGGGCTAAAACCGAAGAACATCCCAATCAAAAGGCT
CACCATCAACCCTGAGAAGAGTGGCGGTCGTGCACTGTTGATGGTGCTGC
CGTCTGAGGAGGAAGGAGTTCTGGCTGGGCTAAAACCGAAGAACATCCCA
ATCAAAAGGCTCACCATCAACCCTGAGAAGGTGCGGATGGCTGGTTCGGT
GGGCAAAAAAGCCTCCGCGCTTGTGGCGTCTGACCCAGACAAGAAACGCC
TCGCGGAGAAGTCCTTCACGTCGTACGTCAGGGCCATACAGCTCATGCCT
AACAAGCAGGTGCGGATGGCTGGTTCGGTGGGCAAAAAAGCCTCCGCGCT
TGTGGCGTCTGACCCAGACAAGAAACGCCTCGCGGAGAAGTCCTTCACGT
CGTACGTCAGGGCCATACAGCTCATGCCTAACAAGCAGGTCTTCTGTCTG
TCCGAACTTCCTCTGGAGGAATACGCCTTCTCTCTTGGCCTGGCTGCTGT
GCCAAAAGTACCGGGTCTCGAGAAAGCGTTGGAGAACTCGTCCTCTGCCG
GAGGCAAGCTAGCAAATGGTGGCAGCGGGGCAGATGAGGGAGGGGTGGAG
AACGAAAAGCAAAGAGGAGAGGCGCGAGCAAAAAAAAACGTGAACCGATC
GTTGCAGCGCCTCAAGGAGCAAATCAAGGCGGACAAGCTCCGCAAACGCC
TAGAGGTCTTCTGTCTGTCCGAACTTCCTCTGGAGGAATACGCCTTCTCT
CTTGGCCTGGCTGCTGTGCCAAAAGTACCGGGTCTCGAGAAAGCGTTGGA
GAACTCGTCCTCTGCCGGAGGCAAGCTAGCAAATGGTGGCAGCGGGGCAG
ATGAGGGAGGGGTGGAGAACGAAAAGCAAAGAGGAGAGGCGCGAGCAAAA
AAAAACGTGAACCGATCGTTGCAGCGCCTCAAGGAGCAAATCAAGGCGGA
CAAGCTCCGCAAACGCCTAGAGCGCGAGTCCAAGCTTGAGGGGGCAACCA
AAACTGGAGCTGAAGCCGTCACCAAGAAGCCTCGCATCACCAAGAGCCCC
AGCAACGACGACGGCAGCAGCGACAGCGAAGACTCCGATAGCTCGGAGGC
AGACGGTGGCCTGGTTCTCGTTCAAAAAGAGCACCCGGAAGGCGGGGGAG
AGCATCCGGAGGGAACCGATCCGGAAGAGGGTGCGGCGGTCGCTGAGCTC
TTGCAGAAAGCCAAGAAGAAGGAGAAGAAGATGAGGATTACGAGCGACGG
TGTTGCTGCGGCGGGCGTTGCGACGAAGAGGGTCTTCGATGAAGACGGTG
GCGCTGTGCGCGAGTCCAAGCTTGAGGGGGCAACCAAAACTGGAGCTGAA
GCCGTCACCAAGAAGCCTCGCATCACCAAGAGCCCCAGCAACGACGACGG
CAGCAGCGACAGCGAAGACTCCGATAGCTCGGAGGCAGACGGTGGCCTGG
TTCTCGTTCAAAAAGAGCACCCGGAAGGCGGGGGAGAGCATCCGGAGGGA
ACCGATCCGGAAGAGGGTGCGGCGGTCGCTGAGCTCTTGCAGAAAGCCAA
GAAGAAGGAGAAGAAGATGAGGATTACGAGCGACGGTGTTGCTGCGGCGG
GCGTTGCGACGAAGAGGGTCTTCGATGAAGACGGTGGCGCTGTGGACATC
ATCTCGCCGCTGCAGGCTTTCGCTAAGGAGGCCGGTCTCCCGGCGGCAAA
GATTTCCGGCGCCAGCGACACAACTGACTTGCCCGCGGCCAGTGAAGCAT
ACGTGAAGAGGATCAAGGCGAGGCTTGAAGCTGTCGACGGACATCATCTC
GCCGCTGCAGGCTTTCGCTAAGGAGGCCGGTCTCCCGGCGGCAAAGATTT
CCGGCGCCAGCGACACAACTGACTTGCCCGCGGCCAGTGAAGCATACGTG
AAGAGGATCAAGGCGAGGCTTGAAGCTGTCGACGGCGACGACAAGGCGCG
CGACCGAGAGCGTGTGCGCGAGAAGCATCTCAAGCGCCGACTCAAGGGCA
AGGACAAAGAGGAAACCACGGGAGCCCCCACTCTCGGCGGCGGTTGGTCG
TCTGACAGTGATGATGCTGAAAGCGACGGCGACAGCGATGGCAGCGGTGA
TGATGACGACGACAAGAGCAGTGATGAGGGTGATGAGGGTGATGAGGGTG
ATGACGGCGACGGGTCGGAATCTTCCGACGGTGGCGTGGGCGACCAAGAC
CGCAGCAGCGACGACAAGGCGCGCGACCGAGAGCGTGTGCGCGAGAAGCA
TCTCAAGCGCCGACTCAAGGGCAAGGACAAAGAGGAAACCACGGGAGCCC
CCACTCTCGGCGGCGGTTGGTCGTCTGACAGTGATGATGCTGAAAGCGAC
GGCGACAGCGATGGCAGCGGTGATGATGACGACGACAAGAGCAGTGATGA
GGGTGATGAGGGTGATGAGGGTGATGACGGCGACGGGTCGGAATCTTCCG
ACGGTGGCGTGGGCGACCAAGACCGCAGCAGTAGAGGTCGTGGGAAGAGC
TCGGGCAACTCTCGGCGCTCTAGCGAACGAAGTTTAGAGGAGCAGGAGAG
TGAGGTCCTGGCTATGCTTGCTGCTCGGCAGGGAAAGTGAGTAGAGGTCG
TGGGAAGAGCTCGGGCAACTCTCGGCGCTCTAGCGAACGAAGTTTAGAGG
AGCAGGAGAGTGAGGTCCTGGCTATGCTTGCTGCTCGGCAGGGAAAGTGA
back to top