mRNA_L-elsbetiae_contig1581.4045.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1581.4045.1
Unique NamemRNA_L-elsbetiae_contig1581.4045.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1581.4045.1 vs. uniprot
Match: A0A6H5KY73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY73_9PHAE)

HSP 1 Score: 412 bits (1058), Expect = 2.770e-128
Identity = 297/639 (46.48%), Postives = 335/639 (52.43%), Query Frame = 1 
Query:    1 RGTSGLGHLALLDKCYMTDDCAPGLFMEADFRTQCETTPFFGEDAVCCKPFATPCDSNHACCSGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDGQLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAD---GQYEDDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRHNASDHDDAPADPADEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDSQGNVFYTLSFGHGTADTIQRVTPPSPSPAPGTADDAVGDPPRGHSGEDVLLYTGTGVILAMAVDADDNLVFSMEDAPAVSGGVFML---RMAPGGVLLLPRDXXXXXXXXXXXXXQAPSSDG-ASSPAVSLAGGLGPFLPGVAVCPATGDVYVSRGHTGIVRLLKDADGGFGNKVEWDMKGMAFDDKGTTRAPLMVWDIAVNSFGIVYITTYVQGVVLKAIFPKSGDGAQVRLVAGLWNSGVTSSSGDGGKATSAVMAYPKGVAIDADDAVYVAEFQGERIRKVSTSGIISTVAGTGRTAYEGDGGPASKAGLDLPNAIAFAPGKTPSKMAIADFGHSAVRVITP 1896
            R T   G LALLD CYMTDDC PGL++EA FRTQCE TPF G D VCCKPFATPCDS+ ACCSG                           XXXXXXXXXXXXXX      D   D                       XXXXXXXXXXXXX       D   G Y                                          D                                EG  + +    AP   +                                A+DSQGNVFY++S G G  D I      SP                       ++Y GTG+ILAMA+DADDNL+F+MEDAPAVSGGVF+L   ++ PGG +    D             + PS  G A + AVSLA GLGPFLPGVAVCP TGDVYV+RGHTGI RL+K  DG F  K+EW+M  MAF D   TRAPLMVWDIAVNS GIVY TTYVQGVVLK IFP+ G  AQVRL+ G W+SGV+ SSGDGGKA SAV+AYPKG+A+DADD +YVAEFQGE+IR +STSGIIST  GTG TA        SKAGLDLPNAIAF P    S+MAIADFGH+AVRV+TP
Sbjct:   68 RNTESFGPLALLDVCYMTDDCTPGLYVEAGFRTQCEKTPFSGGDTVCCKPFATPCDSDKACCSGNCDVSHTRCDDAIVPAHPTDEEHSHEDXXXXXXXXXXXXXXSSDTPRDSSGDILTDQRDAEGGQLYDDGESSYGEXXXXXXXXXXXXXSITGPGLDRYWGGYFGRYSFGQYDYTTSSEATPRTQDNPSAEDSGTRPSEDPAGSPDSNQDDEKGTEFPPRHDETSGASPKDDGVHEGGEGEESTA----APLSTSSTEESSTTICQPDYASGTIETMASSETRVEAVAMDSQGNVFYSVSKGQGPGDAILWAASSSPXXX------XXXXXXXXXXXXXTVVYVGTGIILAMAIDADDNLIFTMEDAPAVSGGVFLLSWRQINPGGGVGA-EDSSDTGVSRYDSYFEMPSETGTAETSAVSLAAGLGPFLPGVAVCPVTGDVYVTRGHTGIARLVKGTDGSFSQKMEWNMVDMAFKDGVKTRAPLMVWDIAVNSIGIVYFTTYVQGVVLKGIFPRQGGVAQVRLLGGKWDSGVSRSSGDGGKALSAVLAYPKGIAVDADDNIYVAEFQGEKIRNISTSGIISTCVGTGSTA--------SKAGLDLPNAIAFMPSTPGSRMAIADFGHNAVRVVTP 687
[Close]
BLAST of mRNA_L-elsbetiae_contig1581.4045.1 vs. uniprot
Match: D7FIV4_ECTSI (NHL repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV4_ECTSI)

HSP 1 Score: 354 bits (909), Expect = 3.360e-107
Identity = 272/641 (42.43%), Postives = 310/641 (48.36%), Query Frame = 1 
Query:    1 RGTSGLGHLALLDKCYMTDDCAPGLFMEADFRTQCETTPFFGEDAVCCKPFATPCDSNHACCSGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDGQLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGQYEDDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRHNASDHDDAPADPADEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDSQGNVFYTLSFG---HGTADTIQRVTPPSPSPAPGTADDAVGDPPRGHSGEDVL--LYTGTGVILAMAVDADDNLVFSMEDAPAVSGGVFMLRMA----PGGVLLLPRDXXXXXXXXXXXXXQAPSSDGASSPAVSLAGGLGPFLPGVAVCPATGDVYVSRGHTGIVRLLKDADGGFGNKVEWDMKGMAFDDKGTTRAPLMVWDIAVNSFGIVYITTYVQGVVLKAIFPKSGDGAQVRLVAGLWNSGVTSSSGDGGKATSAVMAYPKGVAIDADDAVYVAEFQGERIRKVSTSGIISTVAGTGRTAYEGDGGPASKAGLDLPNAIAFAPGKTPSKMAIADFGHSAVRVITP 1896
            R T   G LALLD CYMTDDC PGL++EA FRTQCE TPF G D VCCKPFATPCDS+ ACCSG                                              DD    XXXXXXXXXXXXXXXXXXXXXXX                     GQ  DD                                    Y++                                 + RH+  D D       D                                 +  G   Y    G   +   D      PP      G +  A G    G   E     L T +    +  +   D    ++E   +    V  + M     PGG +                      ++ A + AVSLA GLGPFLPGVAVCP TGDVYV+RGHTGI RL+K  DG FG K+EW+M  MAF D   TRAPLMVWDIAVNS GIVY TTYVQGVVLK IFP+ G  AQVRLV G W+SGV+ SSGDGGKA SAV+AYPKG+A+DADD +YVAEFQGE+IR +STSGIIST  GTG TAYEGDGGPAS+AGLDLPNAIAF P    S+MAIADFGH+AVRV+TP
Sbjct:   68 RNTESFGPLALLDVCYMTDDCTPGLYVEAGFRTQCEKTPFSGGDTVCCKPFATPCDSDKACCSGNCDASHARCDDAVVPAHPTDEEHSHE--------------------DDFXXXXXXXXXXXXXXXXXXXXXXXXXXTSDTPKDSSGDIMADQQDGEGGQLYDDGETSYGE-----------------------------YDD--------------------------------VQYRHDKYD-DRITGSGLDRYWDGYSGRYSFGQYDYTTSSEDTPRAQDNPLAEDSGTRLYEDRVGSPDNNHDDEKGTEFPPPHDETSGASPKADGAHEGGEGEESTTGPLSTSSTEESSTTICQPDYAAGTIETMASSETRVEAVAMDSQINPGGGVGAEDSSGTGVSMYDSFFEMTSETETAETSAVSLAAGLGPFLPGVAVCPVTGDVYVTRGHTGIARLVKGTDGSFGQKMEWNMVDMAFKDGVKTRAPLMVWDIAVNSIGIVYFTTYVQGVVLKGIFPRQGGAAQVRLVGGKWDSGVSGSSGDGGKALSAVLAYPKGIAVDADDNIYVAEFQGEKIRNISTSGIISTCVGTGSTAYEGDGGPASEAGLDLPNAIAFMPSTPGSRMAIADFGHNAVRVVTP 626
[Close]
BLAST of mRNA_L-elsbetiae_contig1581.4045.1 vs. uniprot
Match: B5GTM2_STRCL (NHL repeat-containing protein n=3 Tax=Streptomyces clavuligerus TaxID=1901 RepID=B5GTM2_STRCL)

HSP 1 Score: 99.0 bits (245), Expect = 8.640e-18
Identity = 78/219 (35.62%), Postives = 111/219 (50.68%), Query Frame = 1 
Query: 1258 GGLGPFLPGVAVCP------ATGDVYVSRGHTGIVRLLKDADGGFGNKVEWDMKGMAFDDKGTTRAPL-MVWDIAVNSFGIVYITTYVQGVVLKAIFPKSGDGAQVRLVAGLWNSGVTSSSGDGGKATSAVMAYPKGVAIDADDAVYVAEFQGERIRKVSTSGIISTVAGTGRTAYEGDGGPASKAGLDLPNAIAFAPGKTPSKMAIADFGHSAVRVIT 1893
            G  GP +     CP        G VYV+      VR +  ADG     V   + G + D    T A L   + +AV+S G++Y+T Y    + K     + DG  +  VAG   +G T + GD G A SA +  P GVA+D   AVY+A+    RIRK++  G ISTVAGTG   ++GDGGPA+ A L+ P  +      +   + +AD+G+  +R IT
Sbjct:  106 GDNGPAVSAQLNCPREVAVDGAGAVYVTDAENHRVRKIT-ADGTISTVVGTGVAGFSGDGGPATAARLNRPFGVAVDSTGVLYVTEYNNNRIRKV----AADGT-ISTVAG---TGATGNRGDDGPAASAQLNRPYGVAVDGAGAVYIADTDNHRIRKITADGTISTVAGTGTGGFDGDGGPATAARLNRPMGVVI---DSTGTLYVADYGNHRIRKIT 312
[Close]
BLAST of mRNA_L-elsbetiae_contig1581.4045.1 vs. uniprot
Match: UPI00200F0506 (protein kinase n=1 Tax=Frankia sp. AgB32 TaxID=631119 RepID=UPI00200F0506)

HSP 1 Score: 96.3 bits (238), Expect = 1.220e-16
Identity = 109/346 (31.50%), Postives = 163/346 (47.11%), Query Frame = 1 
Query:  865 VDSQGNVFYTLSFGHGTADTIQRVTPPSPSPAPGTADDAVGDPPRGHSGEDVLLYTGTGVILAMAVDADDNLVFSMEDAPAVS-GGVFMLRM--APGGVLLLPRDXXXXXXXXXXXXXQAPSSDGASSPAVSLAGGLGPFLPGVAVCPATGDVYVSRGHTGIVRLLKDADGGFGNKVEWDMKGMAFDDKGTTRAPLM-VWDIAVNSFGIVYITTYVQGVVLKAIFPKSGDGAQVRLVAGLWNSGVTSSSGDGGKATSAVMAYPKGVAIDADDAVYVAEFQGERIRKVSTSGIISTVAGTGRTAYEGDGGPASKAGLDLPNAIAFAPGKTPSKMAIADFGHSAVRVI 1890
            VD  GN++ T  +  G    ++R+ P       G  D AVGD   G+SG+      G   + A   DAD   V +  D   ++ GG   +R+  A G +  L  +               P+  G  +PA++ AG   P   GVAV  A G VYV+   TG +R +    G           G + D    TRA L     +A+++ G +Y+       + +        G ++  VAG   +GV   SGDGG AT A++  P+ VA   D  +Y+A+    RIR+++T+G ISTVAGTG+ AY GDGGPA+ A L +P+ +          + IAD+G+  +R I
Sbjct:  441 VDGAGNLYVT-DYDSGR---VRRIGPD------GRVDSAVGDGTEGYSGD------GGPAVHAQLRDADGVGVDAAGDRLILADGGNERVRVVSATGVIGTLAGNGN-------------PAFSGDGAPAIN-AGLSAPT--GVAV-DAAGTVYVAEFDTGRIRRITRG-GVISTVAGTGQPGFSGDGGPATRAALNGPCGLAIDTAGNLYVADSQNNRIRRI-----STGGKITTVAG---AGVEGFSGDGGPATRALLHGPRRVAAAPDGTLYIADTHNNRIRRINTAGEISTVAGTGKGAYSGDGGPATSATLKMPDGMTV---DRAGNLFIADYGNHRIRRI 741
[Close]
BLAST of mRNA_L-elsbetiae_contig1581.4045.1 vs. uniprot
Match: UPI001EF4CBB1 (protein kinase n=4 Tax=Frankia TaxID=1854 RepID=UPI001EF4CBB1)

HSP 1 Score: 95.5 bits (236), Expect = 2.250e-16
Identity = 60/165 (36.36%), Postives = 91/165 (55.15%), Query Frame = 1 
Query: 1402 GMAFDDKGTTRAPLMVWDIAVNSFGIVYITTYVQGVVLKAIFPKSGDGAQVRLVAGLWNSGVTSSSGDGGKATSAVMAYPKGVAIDADDAVYVAEFQGERIRKVSTSGIISTVAGTGRTAYEGDGGPASKAGLDLPNAIAFAPGKTPSKMAIADFGHSAVRVITP 1896
            G+A+     T + L  +D+ ++  G +YIT +    + K      G    V  VAG   SG TS   DGG A  A +  P    +D+   +Y+++   +RIRK+ T+GII+T+AGTG   + GDGGPAS A L+ PN +A A   T   + +AD+G+  +R I+P
Sbjct:  464 GVAYAGPAVTLSGLDAYDVTIDRAGALYITDWTSHQIHKI-----GKDGTVTTVAGTGTSGFTS---DGGPANQAQLDSPAATVLDSSGNIYISDSSNQRIRKIDTNGIITTIAGTGTAGFTGDGGPASAAQLNEPNGLALAADGT---LYVADYGNQRIRRISP 617
[Close]
BLAST of mRNA_L-elsbetiae_contig1581.4045.1 vs. uniprot
Match: UPI0005273316 (RICIN domain-containing protein n=1 Tax=Streptomyces atroolivaceus TaxID=66869 RepID=UPI0005273316)

HSP 1 Score: 92.8 bits (229), Expect = 7.260e-16
Identity = 64/148 (43.24%), Postives = 91/148 (61.49%), Query Frame = 1 
Query: 1450 WDIAVNSFGIVYITTYVQGVVLKAIFPKSGDGAQVRLVAGLWNSGVTSSSGDGGKATSAVMAYPKGVAIDADDAVYVAEFQGERIRKVSTSGIISTVAGTGRTAYEGDGGPASKAGLDLPNAIAFAPGKTPSKMAIADFGHSAVRVIT 1893
            +D+AV+S G +Y + Y    V K     + DG ++  +AG   +GV   +GDGG+AT A +  P+ +A+D+ DAVYVA+    RIRKV+  G ISTVAGTG     GDGGPA+KA L+ P  +AFA   +     IA++G + VR +T
Sbjct:   45 YDMAVDSTGALYFSDYSNHRVRKI----ATDG-KISTIAGTGTAGV---AGDGGQATKAQLNCPRQIAVDSTDAVYVADSGNHRIRKVTAEGGISTVAGTGAANSAGDGGPATKAQLNRPFGLAFA---SSGAFYIAEYGSNRVRRVT 181
[Close]
BLAST of mRNA_L-elsbetiae_contig1581.4045.1 vs. uniprot
Match: A0A1W9LVG9_9DELT (SASA domain-containing protein (Fragment) n=1 Tax=Desulfobacteraceae bacterium IS3 TaxID=1934248 RepID=A0A1W9LVG9_9DELT)

HSP 1 Score: 94.4 bits (233), Expect = 7.670e-16
Identity = 69/164 (42.07%), Postives = 92/164 (56.10%), Query Frame = 1 
Query: 1402 GMAFDDKGTTRAPL-MVWDIAVNSFGIVYITTYVQGVVLKAIFPKSGDGAQVRLVAGLWNSGVTSSSGDGGKATSAVMAYPKGVAIDADDAVYVAEFQGERIRKVSTSGIISTVAGTGRTAYEGDGGPASKAGLDLPNAIAFAPGKTPSKMAIADFGHSAVRVI 1890
            G A D    T A    ++DI  +S G +YI       + K     SG      +V+ +  +GV SSSGDGG AT+A +  P GVA+D+   +++ E  G RIRKV+TSGIISTVAGTG   Y GDGGPA+ A L  PN IAF    +   + I D  ++ +R I
Sbjct:   55 GFAGDGGPATAAKFNAIYDITKDSAGNIYIADAHNHRIRK--IDTSG------IVSTIAGTGVASSSGDGGIATAATLNTPYGVAVDSAGNIFIVEVSGHRIRKVNTSGIISTVAGTGAFGYSGDGGPATAAQLYKPNDIAF---DSVGNIYITDSSNACIRKI 207
[Close]
BLAST of mRNA_L-elsbetiae_contig1581.4045.1 vs. uniprot
Match: A0A7C3EGM4_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C3EGM4_9DELT)

HSP 1 Score: 93.6 bits (231), Expect = 1.250e-15
Identity = 70/163 (42.94%), Postives = 90/163 (55.21%), Query Frame = 1 
Query: 1399 KGMAFDDKGTTRAPL-MVWDIAVNSFGIVYITTYVQGVVLKAIFPKSGDGAQVRLVAGLWNSGVTSSSGDGGKATSAVMAYPKGVAIDADDAVYVAEFQGERIRKVSTSGIISTVAGTGRTAYEGDGGPASKAGLDLPNAIAFAPGKTPSKMAIADFGHSAVR 1884
            KG + D    TRA L    D+   + G+VY+   +   V K     S DG    +V      G   S+GDGG AT A +  P+GVA+DA   +YVAE  G R+RKVS +G+ISTVAGTG   Y GD GPA++A L  P  IAF        + IADFG+S +R
Sbjct:   67 KGFSGDGGPATRAQLNFPTDVTCTADGVVYVADTLNHRVRKI----SPDGTIATVV----GDGRPFSNGDGGAATQASIYGPRGVALDAAGNLYVAEADGNRVRKVSANGVISTVAGTGAWGYGGDNGPATQAKLANPWHIAF---DLAGNLFIADFGNSRIR 218
[Close]
BLAST of mRNA_L-elsbetiae_contig1581.4045.1 vs. uniprot
Match: UPI00103C7EDA (fibronectin type III domain-containing protein n=1 Tax=Paenibacillus solani TaxID=1705565 RepID=UPI00103C7EDA)

HSP 1 Score: 93.6 bits (231), Expect = 1.350e-15
Identity = 76/202 (37.62%), Postives = 102/202 (50.50%), Query Frame = 1 
Query: 1219 SSDGASSPAVSLAGGLGPFLPGVAVCPATGDVYVSRGHTGIVRLLKDADGGFGNKVEWDMKGMAFDDKGTTRAPLM-VWDIAVNSFGIVYITTYVQGVVLKAIFPKSGDGAQVRLVAGLWNSGVTSSSGDGGKATSAVMAYPKGVAIDADDAVYVAEFQGERIRKVSTSGIISTVAGTGRTAYEGDGGPASKAGLDLPNAIA 1821
            S DG  + + SL        PG     + G++Y++      VR + DA G           G + D    T A L   + +A++S G +YI  Y    + K     SG+   +  VAG  NSG    SGDGG ATSA ++YP GVA+D+ D +Y+A+    RIRKV TSG ISTVAGTG   Y GD G A+ A    P  +A
Sbjct:   35 SEDGVPATSASLNN------PGGVAVDSDGNIYIADSTNHRVRKV-DASGKISTIAGTGTAGYSGDGGAATSAQLNNPYRLALDSVGNLYIVDYSNNCIRK--IDVSGE---INTVAGTGNSGY---SGDGGPATSARLSYPDGVAVDSSDNLYIADKGNHRIRKVDTSGTISTVAGTGVYGYSGDEGDATLAQFRSPTGVA 221
[Close]
BLAST of mRNA_L-elsbetiae_contig1581.4045.1 vs. uniprot
Match: A0A364RCT9_9BACT (Uncharacterized protein n=1 Tax=Pontibacter arcticus TaxID=2080288 RepID=A0A364RCT9_9BACT)

HSP 1 Score: 93.6 bits (231), Expect = 1.360e-15
Identity = 85/302 (28.15%), Postives = 136/302 (45.03%), Query Frame = 1 
Query: 1000 GHSGEDVLLYTGTGVI--LAMAVDADDNLVFSMEDAPAVSGGVFMLRMAPGGVLLLPRDXXXXXXXXXXXXXQAPSSDGASSPAVSLAGGLGPFLPGVAVCPATGDVYVSRGHTGIVRLLKDADGGFGNKVEWD-MKGMAFDDKGTTRAPLMV-WDIAVNSFGIVYITTYVQGVVLKAIFPKSGDGAQVRLVAGLWNSGVTSSSGDGGKATSAVMAYPKGVAIDADDAVYVAEFQGERIRKVSTSGIISTVAGTGRTAYEGDGGPASKAGLDLPNAIAFAPGKTPSKMAIADFGHSAVRVIT 1893
            G +G D    TG  +     +AVDA  N+ F+   A  +       +++  G++                     + DG  +    ++G +G  L        +G++Y +   +  +R +  +  G    V  +   G + D    T A L   W +AV++ G + IT Y    + K         A   +++    +G   S GDGG ATSA    P G++I    A+Y++EF G RIRK+ST+G+ISTVAGTG   + GDGGPA+ A +  P  +A         + IADF +  +R +T
Sbjct:   50 GGAGADGSPATGAAISPPYGVAVDASGNIYFAEYQAHKIR------KISTDGII----------STIAGTGVNGSTGDGGQAVNAQISGPIGITLDN------SGNIYFAEYQSNKIRKISTS--GIITTVAGNGTAGFSGDGGPATSASLYYPWSVAVDAAGNLLITYYQNNRIRKV--------ATNGIISTFAGNGTAVSGGDGGPATSASFRNPTGISIGKSGAIYISEFGGHRIRKISTNGVISTVAGTGTAGFSGDGGPATSAAIASPYNLAV---DGEENIYIADFSNHRIRKVT 316
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1581.4045.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KY73_9PHAE2.770e-12846.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIV4_ECTSI3.360e-10742.43NHL repeat-containing protein n=1 Tax=Ectocarpus s... [more]
B5GTM2_STRCL8.640e-1835.62NHL repeat-containing protein n=3 Tax=Streptomyces... [more]
UPI00200F05061.220e-1631.50protein kinase n=1 Tax=Frankia sp. AgB32 TaxID=631... [more]
UPI001EF4CBB12.250e-1636.36protein kinase n=4 Tax=Frankia TaxID=1854 RepID=UP... [more]
UPI00052733167.260e-1643.24RICIN domain-containing protein n=1 Tax=Streptomyc... [more]
A0A1W9LVG9_9DELT7.670e-1642.07SASA domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7C3EGM4_9DELT1.250e-1542.94Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
UPI00103C7EDA1.350e-1537.62fibronectin type III domain-containing protein n=1... [more]
A0A364RCT9_9BACT1.360e-1528.15Uncharacterized protein n=1 Tax=Pontibacter arctic... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1581contigL-elsbetiae_contig1581:10876..17350 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score103.6
Seed ortholog evalue3.4e-19
Seed eggNOG ortholog443255.SCLAV_p0602
KEGG koko:K01179
KEGG ReactionR06200,R11307,R11308
KEGG Pathwayko00500,ko01100,map00500,map01100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.polysaccharide catabolic process
EggNOG OGsCOG2730@1,COG2730@2,COG3386@1,COG3386@2
EC3.2.1.4
COG Functional cat.G
CAZyGH5,GH9
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Ec32 ortholog descriptionNHL repeat-containing protein
Ec32 orthologEc-07_007620.1
Exons10
Model size2776
Cds size1857
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1581.4045.1prot_L-elsbetiae_contig1581.4045.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1581 11747..17302 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815649.5332677-UTR-L-elsbetiae_contig1581:10875..117461622815649.5332677-UTR-L-elsbetiae_contig1581:10875..11746Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1581 10876..11746 -
1691683013.9711318-UTR-L-elsbetiae_contig1581:10875..117461691683013.9711318-UTR-L-elsbetiae_contig1581:10875..11746Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1581 10876..11746 -
1622815649.6468613-UTR-L-elsbetiae_contig1581:17302..173501622815649.6468613-UTR-L-elsbetiae_contig1581:17302..17350Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1581 17303..17350 -
1691683014.106722-UTR-L-elsbetiae_contig1581:17302..173501691683014.106722-UTR-L-elsbetiae_contig1581:17302..17350Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1581 17303..17350 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815649.5431094-CDS-L-elsbetiae_contig1581:11746..118931622815649.5431094-CDS-L-elsbetiae_contig1581:11746..11893Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1581 11747..11893 -
1691683013.9839265-CDS-L-elsbetiae_contig1581:11746..118931691683013.9839265-CDS-L-elsbetiae_contig1581:11746..11893Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1581 11747..11893 -
1622815649.5518854-CDS-L-elsbetiae_contig1581:12318..125731622815649.5518854-CDS-L-elsbetiae_contig1581:12318..12573Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1581 12319..12573 -
1691683013.9957864-CDS-L-elsbetiae_contig1581:12318..125731691683013.9957864-CDS-L-elsbetiae_contig1581:12318..12573Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1581 12319..12573 -
1622815649.5634887-CDS-L-elsbetiae_contig1581:13170..132901622815649.5634887-CDS-L-elsbetiae_contig1581:13170..13290Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1581 13171..13290 -
1691683014.0078602-CDS-L-elsbetiae_contig1581:13170..132901691683014.0078602-CDS-L-elsbetiae_contig1581:13170..13290Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1581 13171..13290 -
1622815649.574108-CDS-L-elsbetiae_contig1581:13706..142131622815649.574108-CDS-L-elsbetiae_contig1581:13706..14213Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1581 13707..14213 -
1691683014.0162773-CDS-L-elsbetiae_contig1581:13706..142131691683014.0162773-CDS-L-elsbetiae_contig1581:13706..14213Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1581 13707..14213 -
1622815649.5844324-CDS-L-elsbetiae_contig1581:14781..149171622815649.5844324-CDS-L-elsbetiae_contig1581:14781..14917Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1581 14782..14917 -
1691683014.032157-CDS-L-elsbetiae_contig1581:14781..149171691683014.032157-CDS-L-elsbetiae_contig1581:14781..14917Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1581 14782..14917 -
1622815649.593932-CDS-L-elsbetiae_contig1581:15349..155901622815649.593932-CDS-L-elsbetiae_contig1581:15349..15590Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1581 15350..15590 -
1691683014.0441585-CDS-L-elsbetiae_contig1581:15349..155901691683014.0441585-CDS-L-elsbetiae_contig1581:15349..15590Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1581 15350..15590 -
1622815649.6033146-CDS-L-elsbetiae_contig1581:15686..159351622815649.6033146-CDS-L-elsbetiae_contig1581:15686..15935Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1581 15687..15935 -
1691683014.0547926-CDS-L-elsbetiae_contig1581:15686..159351691683014.0547926-CDS-L-elsbetiae_contig1581:15686..15935Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1581 15687..15935 -
1622815649.6127627-CDS-L-elsbetiae_contig1581:16283..163561622815649.6127627-CDS-L-elsbetiae_contig1581:16283..16356Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1581 16284..16356 -
1691683014.0654716-CDS-L-elsbetiae_contig1581:16283..163561691683014.0654716-CDS-L-elsbetiae_contig1581:16283..16356Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1581 16284..16356 -
1622815649.6222744-CDS-L-elsbetiae_contig1581:16873..169691622815649.6222744-CDS-L-elsbetiae_contig1581:16873..16969Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1581 16874..16969 -
1691683014.0790462-CDS-L-elsbetiae_contig1581:16873..169691691683014.0790462-CDS-L-elsbetiae_contig1581:16873..16969Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1581 16874..16969 -
1622815649.6351032-CDS-L-elsbetiae_contig1581:17269..173021622815649.6351032-CDS-L-elsbetiae_contig1581:17269..17302Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1581 17270..17302 -
1691683014.0910408-CDS-L-elsbetiae_contig1581:17269..173021691683014.0910408-CDS-L-elsbetiae_contig1581:17269..17302Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1581 17270..17302 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1581.4045.1

>prot_L-elsbetiae_contig1581.4045.1 ID=prot_L-elsbetiae_contig1581.4045.1|Name=mRNA_L-elsbetiae_contig1581.4045.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=619bp
MTDDCAPGLFMEADFRTQCETTPFFGEDAVCCKPFATPCDSNHACCSGTC
SSKHSRCDDIVRSPPSSEDGQYDDGQYEDDGQYDDGKYEADGKYDDGQLD
DGQYEEDGQYDDGQYEADGKYDGGQLDDGQYEKDGQYDDGQYADGQYEDD
ADGQHDDGQYEADGKYDDGQLDGGQYEEDGQFDDGQYEEDGQYDDGQNEA
DGKYDDGQLDDGQHEEDGQYSDEGRHNASDHDDAPADPADEEDGAPSCVA
DYASGTIETVASSPEERIEVVAVDSQGNVFYTLSFGHGTADTIQRVTPPS
PSPAPGTADDAVGDPPRGHSGEDVLLYTGTGVILAMAVDADDNLVFSMED
APAVSGGVFMLRMAPGGVLLLPRDDDADAALGGGGGEQAPSSDGASSPAV
SLAGGLGPFLPGVAVCPATGDVYVSRGHTGIVRLLKDADGGFGNKVEWDM
KGMAFDDKGTTRAPLMVWDIAVNSFGIVYITTYVQGVVLKAIFPKSGDGA
QVRLVAGLWNSGVTSSSGDGGKATSAVMAYPKGVAIDADDAVYVAEFQGE
RIRKVSTSGIISTVAGTGRTAYEGDGGPASKAGLDLPNAIAFAPGKTPSK
MAIADFGHSAVRVITPCA*
back to top

mRNA from alignment at L-elsbetiae_contig1581:10876..17350-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1581.4045.1 ID=mRNA_L-elsbetiae_contig1581.4045.1|Name=mRNA_L-elsbetiae_contig1581.4045.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6475bp|location=Sequence derived from alignment at L-elsbetiae_contig1581:10876..17350- (Laminarionema elsbetiae ELsaHSoW15)
CGCGGTACCAGCGGCCTTGGACACCTAGCGTTGCTCGACAAATGCTACAT
GACAGACGACTGTGCGCCAGGGTTATTCATGGTAAGTTCCAACACTTATT
AACATTATACGCAAAGGTGCGGGAGTTTATAGCTATCCTACAAACAGGAG
GCGTGTCTATGTAGACTATGTAGATATGTAGGCACTTCTCACCAAGATAC
TACATATGTATCTACGTATCTAGACTATTTAGTCGTGTGTCTTTTCAGCG
GCAGGAAACAACTCACAAAAAAATACTCCACAATTCGTTCTCAGTAGGTT
TCAGAACGACCGTCACCTCCGAGTAAGACGCCATCCATTCCCCTGTACGT
TGCACTCCGCTGTTTCTTAACACAACCCCAGGAAGCCGACTTCCGGACAC
AGTGCGAAACGACACCATTCTTCGGTGAAGATGCCGTCTGCTGCAAGCCA
TTTGCGACACCATGCGATTCAAACCACGTGAGATGAAAAGTGCGCCGCAG
GGCTTTCAAGTTTCCTGCGGTTCGATACTACACGTAGGTTTCCTCGGGCA
CAGAGCATGTCTAGAGGTCTGCAGGGCTCGGAACAATCTAAAATATATTT
CAACAGTAGTTGGTGCTGCTGGTGTTCTTTGGCGCACGCTCGCGACCGTT
TTGCGACACGACTTGATTCTCGACCTTTTTTTCCAGTTGGTAATTGTGTA
ATCTACCCCCCACTTCTGGAAGAAAGGTTGCACATATACACGAGCGTAAA
GGTGATGTTACCAAAGTATCCCCCAAAATAACTGATGAAGCATTCTAAAT
CGACCGGCGTTTCTACTCTGGCTTTTCGCCTTTCTTTAGACTATTCATCA
GCCCACAAAACCACAGCTCTATCTACACGACGGTACGATGGATTTATCGT
ACTTTTTCTCTCTCTGTCCCTCTTCCCCCCCCCCTCCCCCTTCCCCCCCC
TCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCTCCCTTTCAGGCTTGC
TGCTCTGGGACCTGCAGCAGCAAGCACTCGCGGTGTGACGATATTGTCCG
ATCTCCACCCTCCTCGGGTCATCAGGAGGGCGCCACGCATAACCAGAACG
ATGGCGATGGCCAGCAACATGACAGCGGCGACGGTAACGACAGCGGCCAG
AGCGGTGATGGCCAGTACAACGACAGCCAATACGACCCTGGGCAGTACGA
CGATGGCCAGTTCGACGTTGGCGAGTATGACGACGGCAAGCAGGATGGGG
ACAGTACCATCGCTGATGCCTCAGCCGGTGCTCCCGTGTTTGCCTCGCCT
CCTCCGACAACTGCCCCGACTACGAACCCCCCCTCTTCCAGCCCGATTGA
ATCTCCGGAACATGACGATCAGTCTGACAGCGATGATGGCCAGCACGATG
ACGGCCAGTACGAAGAAGACGGTCAGTACGACGACGGCCAGTATGAAGAT
GACGGTCAGTACGACGACGGCAAGTACGAAGCAGACGGCAAGTACGATGA
TGGCCAGCTTGATGACGGCCAGTATGAAGAAGACGGTCAATACGACGACG
GCCAGTACGAAGCAGACGGCAAGTACGACGGCGGCCAGCTTGATGACGGC
CAGTACGAAAAAGACGGTCAGTACGACGATGGCCAGTACGCCGACGGCCA
GTACGAAGACGACGGTCAGTACGATGAAGACGGTCTGTACGAAGCGGACG
GCAAGTACGACGAAGGCCAGCTTGATGACGGCCAGCACGAAGAAGACGGT
CAGTACGAAGCAGACGGCCAGCACGATGACGGCCAGTACGAAGCAGACGG
CAAGTACGATGATGGCCAGCTTGATGGCGGCCAGTACGAAGAAGACGGTC
AGTTCGACGACGGCCAGTATGAAGAAGACGGTCAGTACGACGACGGCCAG
AACGAAGCAGACGGCAAGTACGACGATGGCCAGCTTGATGACGGCCAGCA
CGAAGAAGACGGTCAGTACAGCGACGAGGGCCGGCACAATGCCTCCGACC
AGTACGACGATGGCCAGCACGAGGGCGGTCAGTACAACGACGGCAAAAGC
AGCGATGGTGACATCACTGCTGACCGTGCGGGTGGCGGTGCCGCTTTTGC
CTCGCCCGCTCCGGCTGCCGGCCCGATTTCGGACCCACCCTCTCCCGTTC
CGGCCGATTTCCCGGACAATGAAGGAGATGACTTCGATGGATACCCGATG
AAAATCGACCCTGATGGGCCATACGCAAAAGGAAGAAGCTATAGCAATTA
CGATGACGACCACTACCACGGGTACAGCAAGGGAGAGGGTGAAGAAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAACAGGGCCAACGCAACCACCCGCG
CAAAATGAGCAGGACGACAACGACAACGACGACGGCGTCACCCCACAGAC
AGCCCCGCCGTCGCTTCCTCTTCCGCCAGCTAGCGACGACGCCCCTGCGG
ATCCTGCGGACGAGGAAGACGGCGCTCCGAGCTGTGTTGCGGACTACGCT
TCGGGGACGATCGAAACGGTCGCTTCGTCGCCAGAAGAAAGGATTGAGGT
CGTTGCAGTGGACTCGCAGGTGTGACGATCTGGTATCTATCATCGTGCCG
TAGAGGGCACAAGATACCACACCCCCTGGGCCGAAGTTTAGAGCTCCATT
GGTCCGTAATGAAGAGGGTACCAGCACCAAACGATACATTTTCGGACAGC
CCTCGCCTAGATCTTTCCCACGCCACCCCCTTTCGGCACTGGCGCTTTTC
TTGCTGGGGAGGAATAGAGCTTTGAAAATATGTCCAGGGAGTGTGGTATC
TTGTGTCACCTACGGTATTCATGTACGTTTTACGCAGCAGAGTGGCGTCG
GGAAGAAGAGGCGGTCTTCGCGTTAAATAGCCGGGTCAGAGGAGGGCAAC
AAATCTGAACATATCAACAGTGCCTCGTGTTTTCAGACCTTTCGCGCGGT
ATCGTGACTACATACTTTGCAAGTATAGTATGTCTGATACGTTGATACGT
TGTGGGTATAGACAGTTACAGGAACGAAGGCGGATTCAGGGAGATCTTCG
CGTGACTTTGATTCGAGGCACCCTTCCACCCGGAGGTTAACCTCGCGCCT
CCCGTTCCGACCGACCCGCGCGCTCTTACCCCCACAGGGAAACGTCTTCT
ACACGCTAAGCTTCGGCCATGGCACCGCCGACACCATCCAAAGGGTGACG
CCCCCCTCCCCCTCGCCCGCCCCCGGCACCGCCGACGACGCGGTGGGCGA
CCCCCCCCGGGGGCACAGCGGAGAGGACGTGCTCCTTTACACCGGGACCG
GGGTCATCCTCGCCATGGCCGTGGACGCGGACGACAACCTCGTGTTCTCC
ATGGAAGACGCGCCCGCCGTCAGCGGCGGCGTGTTCATGCTGCGCATGGC
GCCCGGGGGGGTTCTCCTCCTCCCACGGGACGATGATGCGGACGCGGCGC
TTGGAGGTGGCGGTGGCGAGCAAGCACCGTCGTCCGATGGTGCCTCCAGC
CCGGCCGTGTCGCTGGCGGGCGGTCTCGGGCCGTTCCTGCCGGGCGTCGC
CGTGTGCCCCGCTACGGGGGACGTGTACGTGTCTAGAGGCCACACCGGGA
TAGTGAGGCTGCTCAAGGATGCCGACGGCGGCTTCGGCAACAAGGTTAGA
CTCGATTCTACGATATTGCTTGCTTGGGGAACCGAGCGAGCTTTTTACCG
CTTCAGGTTGCAGTGTGGCTTGCTTGTTTTGTTCCAAGTTCTATGAGCGC
CCTGCCCTGCCTGCCCATCGGCTGATTGGATTTAGATAGTTGCAGGGAAG
GGGCTGGGGGGGGAGGGGGGGGCACGTGTTCTGCGCTTATGTTGCTGCTT
TAATATCAATTTTTCTGCAGCTTACTTAGATCTTTGCACGATTACGACGA
GCATCACAGCCGACTTCGGAACGTCAAATAGGCACATACCGTGTTATGGC
CGCTGACTGGTATCTCAGTGGATGTCGTGTATGGTACACCTTAGCGTACC
GAAACATTTTAACGCTGGGGAAAACATGCTGACCTTCTGCTCATGCCGTT
TCATCTATAGGTGGAGTGGGACATGAAGGGCATGGCGTTCGACGACAAGG
GGACGACACGAGCCCCGCTGATGGTGTGGGACATCGCCGTAAACAGTTTC
GGCATCGTCTACATAACTACTTACGTTCAGGTTCGTCTCCATCTACGTGA
AAACGCTAAATAGCAGCTTATCTTCATGCATTCCAACCCTCGGAAGGAAG
GCCATCGAAATCTGCCCGTTGCTGTCCGTGTAAATAAATAGTCTCCTAGA
TAACATGTTTCCATGGATGGGGTACGGGAATCATATCGTGATGGGGATAC
ATTATTCAAATGCGACAACAACACGCGCAGCCAAGGGGAAAACGCGACAT
ACATAAAGCACAACCCCGCCAGGCTCGCAACCCCTCTGTTTCCCTGAAAA
CCAAGAGTATCCGAGAAGAAGCCTTTATTTATCTCTGGCTTGCGAGCCGT
GTTTGGTTTTGATGGAACACACGGGTCGCCCGCGGGCATTCCTGGGCGCG
ACGAACTCGGCGCCTTCAACCAACTGGCACGCCCTTTTGTATCTAGACTA
CACCTTCACTCCTTGGGCCTCGTGCATAAACCCGAAAATCTCGCTGTGGA
TGTTTTCGCAACGGGATATGCAGCCGTGGATATGTACTTGCCCCCCTCTC
CATTATACTTCGTATATGTCAACCGTTTATTCCGCCCTGCGCCCCCACCC
AATCCTCCTCCTCGAAACTCCGTACAGGGCGTCGTGCTCAAAGCCATCTT
CCCCAAGAGCGGGGATGGCGCTCAGGTTCGTCTCGTGGCTGGCTTGTGGA
ACTCGGGTGTCACGTCCTCGTCCGGAGACGGCGGGAAGGCCACCTCGGCG
GTGATGGCCTACCCCAAAGGCGTCGCAATTGACGCCGACGACGCCGTCTA
TGTTGCCGAGTTCCAGGGGGAGAGGATCCGGAAGGTGTCCACTTCCGGGA
TCATCTCAACTGTTGCCGGGACGGGACGCACGGTGCGTTCGATTCGGTGG
ATATTAGCTAGTTATTATCTAGGCTAGATAGATAATTAGGCTAGATAATG
TGTAGATACAATCTGGCTTTGTTTGAAAGATTCTAATGCAGCTTTTCAAT
TAGATAAATGATCGCTCGTGATTCAAGGGAATTGGCGAATAAACGAAGTG
CTCCGACTACGCCGCTGTACAACAGCCGCTTCGTCGGAACAACAGCGAGC
ACCTCACTCACTCGGTATAGACTAGATCTAAAATCTAGATCCTTCCTTTT
AACTCACAGCTGTACCTCTCTTCTCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCAGCACACCAGGGCGGGGGGGGGCCCCCCCCCCCCCCCCGG
GGGCGGCCGCCCTCCCTCCCCCCCCCCCCCCCCCCTCGCCTCCACGTCTC
GAGGAAGGCGTACGAGGGCGATGGCGGCCCCGCGTCCAAAGCGGGGCTGG
ACTTGCCCAACGCCATCGCGTTCGCCCCTGGCAAGACCCCGAGCAAGATG
GCCATCGCGGACTTCGGTCACAGCGCCGTACGCGTCATTACACCATGCGC
CTGAATAGCGCAATACTTATAGGACATACACACGCAGCGCCAGTAGTTGG
GACGCGTGTTAAGGCGAGAGTACTAAGCTTCGGCAGCGCAGGGAGGCCAC
GCAGCACAATGTTTTGTATGAGGAAGAGGAAAACAATAATTTCTCGATCA
CCCTCTTTTGCTATCTGATACTCCGCACACTAGATAGATATCTTTACATG
GGGGGGTATTTTTCAATTCGCAACCTGGACCAAGCTTCTTGTCCGCCTTC
TTAAGGGGGGAGGGTACGGTGGTTGGAGCTGTTTTTTCGATCCACACCAA
CAATATTCGCAGAGGGTTTCGAAGCACGAGCTGAATGAAACAAATAAATA
TGGTAGTGAATATGGAATACATTTTCGGGGAGGGTGCGCAGCAGGGGTTT
GTGAGATCTGGAAAAAAATGGTCTGATGACAACATCAAGATCGATACACG
TCGGGAGGAACCCAGCACGGGTCGGGGGCACACACGGGAGAGGGTAGATA
AAGATGCGAGAGAAGCACTGAGAATCGAGCGGGGTAGACTTTTAAGGGGG
CACCCACATAATTCACACCACACACAAAACACACGATAAATTAGTTTAGT
CTTCGTACATGGGAGTAAGTATCGAAGTGAAGGGAAAGGGGAGTGCGATA
ATAGGAAGAGTTGTGGGTCTTTAACGCGTTTCGATTCCTTGCTTGCCCGA
CTAACGTACAATAATAGTAGTTCATTGTTCGGCGGACCATATCCGCATAT
CGCAAAGCCGATACAGGGGCGACGTGATCAAAAAGGGGATGCACAGCAGT
AGCTGCGAGATGGGTCGTGAGGATCTTCGCAAAGTGCGTGTGTGGAGCTG
AACCCAGACTTTAAGCAATCGAGGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1581:10876..17350-

>mRNA_L-elsbetiae_contig1581.4045.1 ID=mRNA_L-elsbetiae_contig1581.4045.1|Name=mRNA_L-elsbetiae_contig1581.4045.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3714bp|location=Sequence derived from alignment at L-elsbetiae_contig1581:10876..17350- (Laminarionema elsbetiae ELsaHSoW15)
ATGACAGACGACTGTGCGCCAGGGTTATTCATGATGACAGACGACTGTGC
GCCAGGGTTATTCATGGAAGCCGACTTCCGGACACAGTGCGAAACGACAC
CATTCTTCGGTGAAGATGCCGTCTGCTGCAAGCCATTTGCGACACCATGC
GATTCAAACCACGAAGCCGACTTCCGGACACAGTGCGAAACGACACCATT
CTTCGGTGAAGATGCCGTCTGCTGCAAGCCATTTGCGACACCATGCGATT
CAAACCACGCTTGCTGCTCTGGGACCTGCAGCAGCAAGCACTCGCGGTGT
GACGATATTGTCCGATCTCCACCCTCCTCGGGCTTGCTGCTCTGGGACCT
GCAGCAGCAAGCACTCGCGGTGTGACGATATTGTCCGATCTCCACCCTCC
TCGGAAGACGGTCAGTACGACGACGGCCAGTATGAAGATGACGGTCAGTA
CGACGACGGCAAGTACGAAGCAGACGGCAAGTACGATGATGGCCAGCTTG
ATGACGGCCAGTATGAAGAAGACGGTCAATACGACGACGGCCAGTACGAA
GCAGACGGCAAGTACGACGGCGGCCAGCTTGATGACGGCCAGTACGAAAA
AGACGGTCAGTACGACGATGGCCAGTACGCCGACGGCCAGTACGAAGACG
ACGAAGACGGTCAGTACGACGACGGCCAGTATGAAGATGACGGTCAGTAC
GACGACGGCAAGTACGAAGCAGACGGCAAGTACGATGATGGCCAGCTTGA
TGACGGCCAGTATGAAGAAGACGGTCAATACGACGACGGCCAGTACGAAG
CAGACGGCAAGTACGACGGCGGCCAGCTTGATGACGGCCAGTACGAAAAA
GACGGTCAGTACGACGATGGCCAGTACGCCGACGGCCAGTACGAAGACGA
CGCAGACGGCCAGCACGATGACGGCCAGTACGAAGCAGACGGCAAGTACG
ATGATGGCCAGCTTGATGGCGGCCAGTACGAAGAAGACGGTCAGTTCGAC
GACGGCCAGTATGAAGAAGACGGTCAGTACGACGACGGCCAGAACGAAGC
AGACGGCAAGTACGACGATGGCCAGCTTGATGACGGCCAGCACGAAGAAG
ACGGTCAGTACAGCGACGAGGGCCGGCACAATGCCTCCGACCACAGACGG
CCAGCACGATGACGGCCAGTACGAAGCAGACGGCAAGTACGATGATGGCC
AGCTTGATGGCGGCCAGTACGAAGAAGACGGTCAGTTCGACGACGGCCAG
TATGAAGAAGACGGTCAGTACGACGACGGCCAGAACGAAGCAGACGGCAA
GTACGACGATGGCCAGCTTGATGACGGCCAGCACGAAGAAGACGGTCAGT
ACAGCGACGAGGGCCGGCACAATGCCTCCGACCACGACGACGCCCCTGCG
GATCCTGCGGACGAGGAAGACGGCGCTCCGAGCTGTGTTGCGGACTACGC
TTCGGGGACGATCGAAACGGTCGCTTCGTCGCCAGAAGAAAGGATTGAGG
TCGTTGCAGTGGACTCGCAGCGACGACGCCCCTGCGGATCCTGCGGACGA
GGAAGACGGCGCTCCGAGCTGTGTTGCGGACTACGCTTCGGGGACGATCG
AAACGGTCGCTTCGTCGCCAGAAGAAAGGATTGAGGTCGTTGCAGTGGAC
TCGCAGGGAAACGTCTTCTACACGCTAAGCTTCGGCCATGGCACCGCCGA
CACCATCCAAAGGGTGACGCCCCCCTCCCCCTCGCCCGCCCCCGGCACCG
CCGACGACGCGGTGGGCGACCCCCCCCGGGGGCACAGCGGAGAGGACGTG
CTCCTTTACACCGGGACCGGGGTCATCCTCGCCATGGCCGTGGACGCGGA
CGACAACCTCGTGTTCTCCATGGAAGACGCGCCCGCCGTCAGCGGCGGCG
TGTTCATGCTGCGCATGGCGCCCGGGGGGGTTCTCCTCCTCCCACGGGAC
GATGATGCGGACGCGGCGCTTGGAGGTGGCGGTGGCGAGCAAGCACCGTC
GTCCGATGGTGCCTCCAGCCCGGCCGTGTCGCTGGCGGGCGGTCTCGGGC
CGTTCCTGCCGGGCGTCGCCGTGTGCCCCGCTACGGGGGACGTGTACGTG
TCTAGAGGCCACACCGGGATAGTGAGGCTGCTCAAGGATGCCGACGGCGG
CTTCGGCAACAAGGGAAACGTCTTCTACACGCTAAGCTTCGGCCATGGCA
CCGCCGACACCATCCAAAGGGTGACGCCCCCCTCCCCCTCGCCCGCCCCC
GGCACCGCCGACGACGCGGTGGGCGACCCCCCCCGGGGGCACAGCGGAGA
GGACGTGCTCCTTTACACCGGGACCGGGGTCATCCTCGCCATGGCCGTGG
ACGCGGACGACAACCTCGTGTTCTCCATGGAAGACGCGCCCGCCGTCAGC
GGCGGCGTGTTCATGCTGCGCATGGCGCCCGGGGGGGTTCTCCTCCTCCC
ACGGGACGATGATGCGGACGCGGCGCTTGGAGGTGGCGGTGGCGAGCAAG
CACCGTCGTCCGATGGTGCCTCCAGCCCGGCCGTGTCGCTGGCGGGCGGT
CTCGGGCCGTTCCTGCCGGGCGTCGCCGTGTGCCCCGCTACGGGGGACGT
GTACGTGTCTAGAGGCCACACCGGGATAGTGAGGCTGCTCAAGGATGCCG
ACGGCGGCTTCGGCAACAAGGTGGAGTGGGACATGAAGGGCATGGCGTTC
GACGACAAGGGGACGACACGAGCCCCGCTGATGGTGTGGGACATCGCCGT
AAACAGTTTCGGCATCGTCTACATAACTACTTACGTTCAGGTGGAGTGGG
ACATGAAGGGCATGGCGTTCGACGACAAGGGGACGACACGAGCCCCGCTG
ATGGTGTGGGACATCGCCGTAAACAGTTTCGGCATCGTCTACATAACTAC
TTACGTTCAGGGCGTCGTGCTCAAAGCCATCTTCCCCAAGAGCGGGGATG
GCGCTCAGGTTCGTCTCGTGGCTGGCTTGTGGAACTCGGGTGTCACGTCC
TCGTCCGGAGACGGCGGGAAGGCCACCTCGGCGGTGATGGCCTACCCCAA
AGGCGTCGCAATTGACGCCGACGACGCCGTCTATGTTGCCGAGTTCCAGG
GGGAGAGGATCCGGAAGGTGTCCACTTCCGGGATCATCTCAACTGTTGCC
GGGACGGGACGCACGGGCGTCGTGCTCAAAGCCATCTTCCCCAAGAGCGG
GGATGGCGCTCAGGTTCGTCTCGTGGCTGGCTTGTGGAACTCGGGTGTCA
CGTCCTCGTCCGGAGACGGCGGGAAGGCCACCTCGGCGGTGATGGCCTAC
CCCAAAGGCGTCGCAATTGACGCCGACGACGCCGTCTATGTTGCCGAGTT
CCAGGGGGAGAGGATCCGGAAGGTGTCCACTTCCGGGATCATCTCAACTG
TTGCCGGGACGGGACGCACGGCGTACGAGGGCGATGGCGGCCCCGCGTCC
AAAGCGGGGCTGGACTTGCCCAACGCCATCGCGTTCGCCCCTGGCAAGAC
CCCGAGCAAGATGGCCATCGCGGACTTCGGTCACAGCGCCGTACGCGTCA
TTACACCATGCGCCTGAGCGTACGAGGGCGATGGCGGCCCCGCGTCCAAA
GCGGGGCTGGACTTGCCCAACGCCATCGCGTTCGCCCCTGGCAAGACCCC
GAGCAAGATGGCCATCGCGGACTTCGGTCACAGCGCCGTACGCGTCATTA
CACCATGCGCCTGA
back to top