mRNA_L-elsbetiae_contig1580.4040.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1580.4040.1 vs. uniprot
Match: D8LSD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSD6_ECTSI) HSP 1 Score: 129 bits (324), Expect = 2.210e-36 Identity = 107/112 (95.54%), Postives = 109/112 (97.32%), Query Frame = 1 Query: 1 MSISKELHDELCTSYAALALHDGDAEITSDQISALITATGNEVEPYWPALFSAFLAKAGIEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMF 336 MSISKELHDELCTSYAALAL+DGDAEITSDQ+SALITATGNEVE YWP LFS FLAKAGIEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMF Sbjct: 1 MSISKELHDELCTSYAALALYDGDAEITSDQLSALITATGNEVEGYWPTLFSGFLAKAGIEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMF 112
BLAST of mRNA_L-elsbetiae_contig1580.4040.1 vs. uniprot
Match: A0A835YXP2_9STRA (60s acidic ribosomal protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXP2_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.200e-27 Identity = 86/110 (78.18%), Postives = 96/110 (87.27%), Query Frame = 1 Query: 16 ELHDELCTSYAALALHDGDAEITSDQISALITATGNEVEPYWPALFSAFLAKAGIEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGG 345 ++HDELCTSYAALAL+DG+AEITS+Q+ LI ATGNEVE YWP LF+++LAKAGIE LILA XXXXXXXXXXXXXXXXXXXXXXXXXXXX +DMGGGMDMFGGG Sbjct: 3 DIHDELCTSYAALALYDGEAEITSEQLKTLIEATGNEVEAYWPTLFASYLAKAGIEDLILAVGSAPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXX-VDMGGGMDMFGGG 111
BLAST of mRNA_L-elsbetiae_contig1580.4040.1 vs. uniprot
Match: F0WMR0_9STRA (Uncharacterized protein AlNc14C160G7746 n=2 Tax=Albugo TaxID=65356 RepID=F0WMR0_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 2.350e-23 Identity = 78/115 (67.83%), Postives = 90/115 (78.26%), Query Frame = 1 Query: 1 MSISKELHDELCTSYAALALHDGDAEITSDQISALITATGNEVEPYWPALFSAFLAKAG-IEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGG 342 M +SKE HDELC SYA+L L DG+AEITSD + ++ITA+GNEVEPYWP LF+ FL+K G I LI + XXXXXXXXXXXXXXXXXXXXXXXXX +D+GGGMDMFGG Sbjct: 1 MPLSKEQHDELCVSYASLILFDGEAEITSDALMSVITASGNEVEPYWPTLFAGFLSKEGRIMDLITSGGPSSGAXXXXXXXXXXXXXXXXXXXXXXXXXEEADMDLGGGMDMFGG 115
BLAST of mRNA_L-elsbetiae_contig1580.4040.1 vs. uniprot
Match: A0A0P5M2D2_9CRUS (Putative 60S acidic ribosomal protein P1 n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5M2D2_9CRUS) HSP 1 Score: 93.2 bits (230), Expect = 3.610e-22 Identity = 82/117 (70.09%), Postives = 94/117 (80.34%), Query Frame = 1 Query: 1 MSISKELHDELCTSYAALALHDGDAEITSDQISALITATGNEVEPYWPALFSAFLAKAGIEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGGGE 351 M+ISK HDELC +YA LAL DG+AEITSD I+ALI A+GNEVEPYWP+LF+ L K+ + L L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++GGGMDMFGGG + Sbjct: 1 MAISKAQHDELCVTYATLALFDGEAEITSDAIAALIKASGNEVEPYWPSLFAGLLGKSNKKILDLISSGGPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANIGGGMDMFGGGSD 117
BLAST of mRNA_L-elsbetiae_contig1580.4040.1 vs. uniprot
Match: K3WS98_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS98_GLOUD) HSP 1 Score: 92.8 bits (229), Expect = 4.850e-22 Identity = 83/117 (70.94%), Postives = 96/117 (82.05%), Query Frame = 1 Query: 1 MSISKELHDELCTSYAALALHDGDAEITSDQISALITATGNEVEPYWPALFSAFLAKAGIEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGGGE 351 MS+SKE HDELC SYA+L L DG+AEITSD ISA+I A+GNEV PYWP LF++ LAK+ +K++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+G GMDMFGGG + Sbjct: 1 MSMSKEQHDELCVSYASLVLFDGEAEITSDAISAVIAASGNEVAPYWPTLFASLLAKS--DKVLELISSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEADLGAGMDMFGGGAD 115
BLAST of mRNA_L-elsbetiae_contig1580.4040.1 vs. uniprot
Match: A0A8K1CSL3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSL3_PYTOL) HSP 1 Score: 91.3 bits (225), Expect = 2.010e-21 Identity = 80/117 (68.38%), Postives = 93/117 (79.49%), Query Frame = 1 Query: 1 MSISKELHDELCTSYAALALHDGDAEITSDQISALITATGNEVEPYWPALFSAFLAKAGIEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGGGE 351 M +SKE HDELC SYA+L L DG+AE+TSD ++ +I A+GNEVEPYWP LF+ L+K G K++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+GGGMDMFGGGG Sbjct: 1 MVLSKEQHDELCVSYASLILFDGEAELTSDALTTVIKASGNEVEPYWPTLFAGLLSKEG--KVLELISSGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLGGGMDMFGGGGS 115
BLAST of mRNA_L-elsbetiae_contig1580.4040.1 vs. uniprot
Match: W4G6T9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G6T9_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 5.560e-21 Identity = 83/114 (72.81%), Postives = 94/114 (82.46%), Query Frame = 1 Query: 1 MSISKELHDELCTSYAALALHDGDAEITSDQISALITATGNEVEPYWPALFSAFLAKAGIEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGG 342 M+I+KE HDEL SYAAL L DGDAEITS+ +S +ITA+GNEVEPYWP LF+ L+K G ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+GGGMDMFGG Sbjct: 25 MAITKEQHDELAVSYAALVLFDGDAEITSEALSNVITASGNEVEPYWPTLFAGLLSKEGKLLELITSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADLGGGMDMFGG 138
BLAST of mRNA_L-elsbetiae_contig1580.4040.1 vs. uniprot
Match: A0A024UC28_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UC28_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 6.030e-21 Identity = 81/118 (68.64%), Postives = 95/118 (80.51%), Query Frame = 1 Query: 1 MSISKELHDELCTSYAALALHDGDAEITSDQISALITATGNEVEPYWPALFSAFLAKAG-IEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGGGE 351 M+I+KE HDEL SYAAL L DG+AEITS+ +S +I A+GNEVEPYWP LF+ L+K G + +LI + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+GGGMDMFGGG + Sbjct: 1 MAITKEQHDELAVSYAALILFDGEAEITSEALSTVIAASGNEVEPYWPTLFAGLLSKDGKMLELITSGGAIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADLGGGMDMFGGGSD 118
BLAST of mRNA_L-elsbetiae_contig1580.4040.1 vs. uniprot
Match: M4B8T5_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B8T5_HYAAE) HSP 1 Score: 90.1 bits (222), Expect = 6.200e-21 Identity = 78/113 (69.03%), Postives = 92/113 (81.42%), Query Frame = 1 Query: 4 SISKELHDELCTSYAALALHDGDAEITSDQISALITATGNEVEPYWPALFSAFLAKAG-IEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFG 339 +ISKE HDELC SYA++ L DG+ EITS+ I+ ++TA+GNEVEPYWP LF++ L+K G I LI + XXXXXXXXXXXXXXXXXXXXXXXXXXXXX+DMGGGMDMFG Sbjct: 4 TISKEQHDELCVSYASMMLFDGEHEITSEAINTIVTASGNEVEPYWPTLFASLLSKEGKILDLISSGGAASGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFG 116
BLAST of mRNA_L-elsbetiae_contig1580.4040.1 vs. uniprot
Match: A0A3F2RPM9_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RPM9_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.280e-20 Identity = 80/117 (68.38%), Postives = 94/117 (80.34%), Query Frame = 1 Query: 4 SISKELHDELCTSYAALALHDGDAEITSDQISALITATGNEVEPYWPALFSAFLAKAG-IEKLILAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFGGGGE 351 +ISKE HDELC +YA++ L DG+ EITS+ I+ ++ A+GNEVEPYWP LFS L+K G I +LI + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D+GGGMDMFGGG E Sbjct: 3 TISKEQHDELCVAYASMILFDGEHEITSEAINQILHASGNEVEPYWPTLFSGLLSKEGKIAELISSGGASAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLGGGMDMFGGGDE 119 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1580.4040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1580.4040.1 >prot_L-elsbetiae_contig1580.4040.1 ID=prot_L-elsbetiae_contig1580.4040.1|Name=mRNA_L-elsbetiae_contig1580.4040.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=119bp MSISKELHDELCTSYAALALHDGDAEITSDQISALITATGNEVEPYWPALback to top mRNA from alignment at L-elsbetiae_contig1580:7188..9109- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1580.4040.1 ID=mRNA_L-elsbetiae_contig1580.4040.1|Name=mRNA_L-elsbetiae_contig1580.4040.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1922bp|location=Sequence derived from alignment at L-elsbetiae_contig1580:7188..9109- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1580:7188..9109- >mRNA_L-elsbetiae_contig1580.4040.1 ID=mRNA_L-elsbetiae_contig1580.4040.1|Name=mRNA_L-elsbetiae_contig1580.4040.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=714bp|location=Sequence derived from alignment at L-elsbetiae_contig1580:7188..9109- (Laminarionema elsbetiae ELsaHSoW15)back to top |