mRNA_L-elsbetiae_contig158.4038.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig158.4038.1 vs. uniprot
Match: D8LTY2_ECTSI (Signal recognition particle 54 kDa protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTY2_ECTSI) HSP 1 Score: 887 bits (2291), Expect = 0.000e+0 Identity = 469/505 (92.87%), Postives = 485/505 (96.04%), Query Frame = 1 Query: 1 MVLQELGSKLTSALRRLHTDKVVDKETIKAVVGDICRALLESDVKVQMVMKLRKNVEAKAETLVGDQQDGGRGAS-GAAQQRRLIQKAVVDELTGMLDPKTAPYKMKKGRSNVVMFVGLQASAFGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFKQEKYEVIIVDTSGRHKQEDALFDEMKEIQEAVQPDNTTLIMDATQGQAVFDQAKAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMKGLMQQIQESQEGSGDPKEMMERIS-KGQFTLRDLYKQLSSAMKMGPMGKVMGMIPGMGEMAQMANNSGTQGMFKKNLYMMDSMTDDELDGKVDLSQSESRILRIARGSGTHPDEVRGLLKLHKHFEKVFGKVGKNMKGEASKAKQLQRNPALAKQHVSQMDPKVVESLGGRAKVLEMISSGAAGGGAGGA 1509 MVLQELGSKLTSALRRLHTD VVD+ET+KAVVGDICRALLESDV VQMVMKLRKNVEAKAE+LV +QQDGG G GAAQQRR IQKAVVDELTGMLDPKTAPYKM+KGRSNVVMFVGLQ GAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFKQEKYEVIIVDTSGRHKQEDALFDEMKEIQEAVQPDNTTLIMDATQGQAVFDQAKAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMKGLM+QIQESQEGSGDPKEMMERIS KG+FTLRDLYKQLSSAMK+GPM KVMGMIPGMGEMAQMANNS TQGMFKKNLY+MDSMTDDELDGKVDLSQ ESR+LRIARGSGTHPD+VRGLLKLHKHFEKVFGKVGKNMKG+ASKAKQLQRNPALAKQH++QMDPKVVESLGGRAKVLE+I +G AGG GGA Sbjct: 1 MVLQELGSKLTSALRRLHTDTVVDRETVKAVVGDICRALLESDVNVQMVMKLRKNVEAKAESLVAEQQDGGAGGGVGAAQQRRSIQKAVVDELTGMLDPKTAPYKMRKGRSNVVMFVGLQ----GAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFKQEKYEVIIVDTSGRHKQEDALFDEMKEIQEAVQPDNTTLIMDATQGQAVFDQAKAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMKGLMRQIQESQEGSGDPKEMMERISNKGKFTLRDLYKQLSSAMKLGPMNKVMGMIPGMGEMAQMANNSTTQGMFKKNLYIMDSMTDDELDGKVDLSQCESRLLRIARGSGTHPDQVRGLLKLHKHFEKVFGKVGKNMKGDASKAKQLQRNPALAKQHLNQMDPKVVESLGGRAKVLEIIKNGGAGGPGGGA 501
BLAST of mRNA_L-elsbetiae_contig158.4038.1 vs. uniprot
Match: A0A835YYR6_9STRA (Signal recognition particle 54 kDa protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYR6_9STRA) HSP 1 Score: 569 bits (1466), Expect = 2.310e-197 Identity = 308/502 (61.35%), Postives = 392/502 (78.09%), Query Frame = 1 Query: 1 MVLQELGSKLTSALRRLHTDKVVDKETIKAVVGDICRALLESDVKVQMVMKLRKNVEAKAETLVGDQQDGGRGASGAAQQRRLIQKAVVDELTGMLDPKTAPYKMKKGRSNVVMFVGLQASAFGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFKQEKYEVIIVDTSGRHKQEDALFDEMKEIQEAVQPDNTTLIMDATQGQAVFDQAKAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMKGLMQQIQESQEGSGDPKEMMERISKGQFTLRDLYKQLSSAMKMGPMGKVMG-MIPGMGEMAQMANNSGTQGMFKKNLYMMDSMTDDELDGKVDLSQSESRILRIARGSGTHPDEVRGLLKLHKHFEKVFGKVGKNMK-------GEASKAKQLQRNPALAKQHVSQ---MDPKVVESLGGRAKVLEMI 1473 MVLQELG KL++ALR+L + VVD+E +KA++ +I RALLESDV +++VM+L+KNVEAK + +D ASGA++ +RLIQ+AV++EL MLDPKT PY+MKKG SNV+MFVGLQ G+GKTTTIAKFAHY+QRKGW+VAMVCADTFRAGAFDQLKQNATKLR PFYGSY+EADPVRIA+EGV+QF+++++EVIIVDTSGRHKQEDALF+EM+EIQ AVQPDN +MDATQGQAV DQA+AFHEAV VGSV+ITKLDGHAKGGGA+SAVAAT SPITFLG GEHFDDLE F A SFVS++LGFGD L++++Q++ + DPK+MM+R++KGQFTLRD Y+Q+ +K+GP+ K+MG M+PG+ + AQ K+ LYMMDSM DDELDGKVD++ +E R+ RIARGSGT +EV+ LL+ HK EKV ++GK+ A+K QL +NP + M P++++ +GGR V + + Sbjct: 1 MVLQELGGKLSAALRKLQSTTVVDEEVVKAIITEITRALLESDVNIKVVMELKKNVEAK----INRSED----ASGASK-KRLIQQAVMEELVAMLDPKTPPYQMKKGASNVIMFVGLQ----GSGKTTTIAKFAHYYQRKGWRVAMVCADTFRAGAFDQLKQNATKLRVPFYGSYTEADPVRIAEEGVEQFRKDRFEVIIVDTSGRHKQEDALFEEMREIQAAVQPDNCVFVMDATQGQAVADQARAFHEAVPVGSVVITKLDGHAKGGGAMSAVAATKSPITFLGSGEHFDDLEPFVASSFVSKMLGFGDFGSLLRELQDTNDPGMDPKKMMDRMTKGQFTLRDFYQQIQGVLKLGPLNKMMGGMMPGIPDTAQQ----------KRFLYMMDSMRDDELDGKVDIAGNEKRVTRIARGSGTRVEEVQLLLRQHKAREKVVAQMGKSGMMNAATDPAMAAKMAQLMQNPNSRASQAAMSKMMSPQMLKQMGGRDGVAKRM 479
BLAST of mRNA_L-elsbetiae_contig158.4038.1 vs. uniprot
Match: A0A448YZ54_9STRA (SRP54 domain-containing protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448YZ54_9STRA) HSP 1 Score: 553 bits (1424), Expect = 7.080e-190 Identity = 310/523 (59.27%), Postives = 382/523 (73.04%), Query Frame = 1 Query: 1 MVLQELGSKLTSALRRLHTDKV-VDKETIKAVVGDICRALLESDVKVQMVMKLRKNVEAKAETLVGDQQDG-------GRGASGAAQQRRLIQKAVVDELTGMLDPKTAPYKMKKGRSNVVMFVGLQASAFGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFKQEKYEVIIVDTSGRHKQEDALFDEMKEIQEAVQPDNTTLIMDATQGQAVFDQAKAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMKGLMQQIQESQEGSGDPKE-MMERISKGQFTLRDLYKQLSSAMKMGPMGKVMGMIPGMGE-MAQMANNSGTQGMFKKNLYMMDSMTDDELDGKVDLSQSE-----SRILRIARGSGTHPDEVRGLLKLHKHFEKVFGKVGKN-MKGEASKAKQ------LQRNPALAKQHVSQMDPKVVESLGGRAKVLEMISSGAAGGGAG 1503 MVL ELG KL +LR+LHT V + V+ ++ RAL+ESDV V++VM LR NV+ K E L+ D +D + A+ +++QKAVVDEL G+L+P PY MK+G+ NV++FVGLQ GAGKTTTIAKFA+Y+QR+GWK AMVCADTFRAGAFDQLKQNATKLR PFYGSY++ADPV IA+EGV QF +E YEVIIVDTSGRH+QE L +EM+EI AV PDN L+MDATQGQAVFDQA+AF AV VGSV+ITKLDGHAKGGGALSAVAAT SPI FLG GEHFDDLE F+AQSF+S+LLGFGD++GLM E+ GS D KE +ME++SKG+FTLRD+YKQ M MGP+ K+MGM+PGM E + +S + KK LYMMDSMTD ELDGKVD S E SRI RIA GSG HP EV+ LL++HK FE + K+GK+ M G+ + A+Q ++RNP Q ++QMDPK++E +GGR +V + + A GGG G Sbjct: 1 MVLAELGGKLRESLRKLHTSSGHVTATKLNQVLTEVTRALIESDVNVRLVMTLRNNVKKKVERLIEDDEDSETEEDSDXKKEQRASNVSKMVQKAVVDELVGLLEPSRKPYGMKRGKPNVILFVGLQ----GAGKTTTIAKFANYYQRRGWKTAMVCADTFRAGAFDQLKQNATKLRVPFYGSYTQADPVAIAEEGVDQFVKEHYEVIIVDTSGRHRQEAGLLEEMQEISAAVAPDNVVLVMDATQGQAVFDQAQAFSNAVDVGSVVITKLDGHAKGGGALSAVAATESPIIFLGSGEHFDDLEPFNAQSFISKLLGFGDVRGLM----EAMNGSPDDKEELMEKMSKGEFTLRDMYKQFQRVMNMGPLNKMMGMVPGMPEYLVPKGGDSDSNNRLKKFLYMMDSMTDKELDGKVDFSDHEEPQTMSRIRRIAAGSGNHPKEVQMLLQVHKQFEGMVSKMGKSGMVGKQAXAQQQALAAQMRRNPNFINQRLNQMDPKLLEQMGGREQVKSHMENMARGGGGG 515
BLAST of mRNA_L-elsbetiae_contig158.4038.1 vs. uniprot
Match: F0Y473_AURAN (Signal recognition particle 54 kDa protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y473_AURAN) HSP 1 Score: 547 bits (1410), Expect = 1.610e-189 Identity = 298/499 (59.72%), Postives = 380/499 (76.15%), Query Frame = 1 Query: 1 MVLQELGSKLTSALRRLHTDKVVDKETIKAVVGDICRALLESDVKVQMVMKLRKNVEAKAETLVGDQQDGGRGASGAAQQRRLIQKAVVDELTGMLDPKTAPYKMKKGRSNVVMFVGLQASAFGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFKQEKYEVIIVDTSGRHKQEDALFDEMKEIQEAVQPDNTTLIMDATQGQAVFDQAKAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMKGLMQQIQESQEGSGDPKEMMERISKGQFTLRDLYKQLSSAMKMGPMGKVMGMIPG----MGEMAQMANNSGTQGMFKKNLYMMDSMTDDELDGKVDLSQSESRILRIARGSGTHPDEVRGLLKLHKHFEKVFGKVGKN--MKG-EASKAKQLQRNPALAKQHVSQ-MDPKVVESLGGRAKVLEMI 1473 MVLQELGSKLT+AL ++ + V+ +E + ++ DI ALLE+DV V++VM+LRK ++ +A +++ G +R++IQKAVV+EL GMLDP ++MKKG NV+MFVGLQ GAGKTTTIAKFA+++ RKG+K MVCADTFRAGA+DQL+QNATKLRCPFYGSY+EADPVRIA EGV QFK EKYEVIIVDTSGRHKQE ALF+EM+EI+ A++P N ++DATQGQAV +QA +FHEA+ +GSV+ITKLDGHAKGGGALSAVAAT +PI FLG GEHFDD E F+A SFVSRLLG GDM+GL++QI+++ P E+ME+ SKGQFTLRD+Y+Q + MK+GP+ KVM MIPG MG +NN K+ +YMMDSMTDDELD KVDL++S SRI R+ARGSG HP EV+ LLK HK FE V K+GK+ MKG +A+ AKQ+QRNP Q + + MDP++++ +GG ++ M+ Sbjct: 1 MVLQELGSKLTAALHKMQSVTVISEEVLDKMLKDIAAALLEADVNVRVVMELRKAIKTRANL---EEESAG------TNRRKMIQKAVVEELAGMLDPGVKAHEMKKGSPNVIMFVGLQ----GAGKTTTIAKFANHYLRKGFKCCMVCADTFRAGAYDQLRQNATKLRCPFYGSYTEADPVRIAQEGVDQFKAEKYEVIIVDTSGRHKQETALFEEMQEIRAAIEPQNVIFVLDATQGQAVHEQASSFHEAIDIGSVVITKLDGHAKGGGALSAVAATGAPILFLGSGEHFDDFEPFNAHSFVSRLLGMGDMRGLVEQIKDTIGDDKQP-ELMEKFSKGQFTLRDMYEQFENVMKLGPLSKVMAMIPGIPSMMGGEGDESNNR-----LKRFMYMMDSMTDDELDAKVDLNKSASRIERVARGSGCHPMEVQMLLKCHKQFESVVSKMGKSGLMKGGDAAMAKQMQRNPNQVMQQLHKAMDPRMLQQMGGAQNLMSMM 480
BLAST of mRNA_L-elsbetiae_contig158.4038.1 vs. uniprot
Match: A0A7S4VL55_9STRA (Signal recognition particle 54 kDa protein (Fragment) n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VL55_9STRA) HSP 1 Score: 547 bits (1410), Expect = 7.380e-189 Identity = 297/514 (57.78%), Postives = 386/514 (75.10%), Query Frame = 1 Query: 1 MVLQELGSKLTSALRRLHTDK-VVDKETIKAVVGDICRALLESDVKVQMVMKLRKNVEAKAETLVGDQQDGGRGASGAAQQRRLIQKAVVDELTGMLDPK-TAPYKMKKGRSNVVMFVGLQASAFGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFKQEKYEVIIVDTSGRHKQEDALFDEMKEIQEAVQPDNTTLIMDATQGQAVFDQAKAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMKGLMQQIQESQEGSGDPKEMMERISKGQFTLRDLYKQLSSAMKMGPMGKVMGMIPGMGE--MAQMANNSGTQGMFKKNLYMMDSMTDDELDGKVDLSQS-----ESRILRIARGSGTHPDEVRGLLKLHKHFEKVFGKVGKN-MKGEASK------AKQLQRNPALAKQHVSQMDPKVVESLGGRAKVLEMISSGAAGG 1494 MVL ELG KL +LR++H+ +D E + ++ +I RAL+ESDV V++VM +R+N++ + LV ++GG G+ RL+QK+V++ELT ML PK PY M++G+ NV++FVGLQ GAGKTT+I K+A+Y+QR+GWK MVCADTFRAGAFDQLKQNATKLR PFYGSY+EADPV IA+EGV QF ++ YEVIIVDTSGRH+QE ALF+EM+EI AV PDNT +MDATQGQAV+DQA+AFH++V VGSVI+TKLDGHAKGGGALSAVAATNSPI FLG GEHFDD + F+AQSFVS+LLGFGD++G M+++ +S S +E+ME++SKG+FTLRD+YKQ S MKMGP+ KVMGM+PG+ E + + A++ GT + KK +YMMDSMTD ELDGKVD+ + ESRI RIARGSGTHP EV+ +L+ HK FE V ++GK+ M G+A A Q++RNP + MDPK+++ +GG V M+ +GG Sbjct: 1 MVLAELGGKLRESLRKIHSSSGAIDSEQLNVILSEITRALIESDVNVKLVMTMRENIKNRVGELVEKAEEGGAGSHNV---NRLVQKSVMEELTSMLTPKENKPYVMRRGKPNVILFVGLQ----GAGKTTSIGKYANYYQRRGWKTCMVCADTFRAGAFDQLKQNATKLRVPFYGSYTEADPVAIAEEGVAQFAEDGYEVIIVDTSGRHRQESALFEEMQEISAAVSPDNTVFVMDATQGQAVYDQAQAFHDSVPVGSVIVTKLDGHAKGGGALSAVAATNSPIIFLGSGEHFDDFDPFNAQSFVSKLLGFGDVRGFMEEM-KSVHDSKTQEELMEKMSKGEFTLRDMYKQFQSIMKMGPLNKVMGMMPGVPEYLIPKSADDEGTLRL-KKFMYMMDSMTDAELDGKVDMHKKYDPAVESRIKRIARGSGTHPKEVQMMLQAHKQFESVISRMGKSGMMGKAGAENQRKLAAQMKRNPNQVMSQLKNMDPKILKQMGGEENVRNMMKQYQSGG 505
BLAST of mRNA_L-elsbetiae_contig158.4038.1 vs. uniprot
Match: A0A4D9CXS1_9STRA (Signal recognition particle 54 kDa protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXS1_9STRA) HSP 1 Score: 547 bits (1409), Expect = 6.540e-188 Identity = 298/517 (57.64%), Postives = 385/517 (74.47%), Query Frame = 1 Query: 1 MVLQELGSKLTSALRRLHTDKVVDKETIKAVVGDICRALLESDVKVQMVMKLRKNVEAKAETLVGDQQDGGRGASGAAQQRRLIQKAVVDELTGMLDPKTAPYKMKKGRSNVVMFVGLQASAFGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFKQEKYEVIIVDTSGRHKQEDALFDEMKEIQEAVQPDNTTLIMDATQGQAVFDQAKAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMKGLMQQIQE--SQEGSGDPKEMM-ERISKGQFTLRDLYKQLSSAMKMGPMGKVMGMIPGM-------GEMAQMANNSGTQGMFKKNLYMMDSMTDDELDGKVDLSQSESRILRIARGSGTHPDEVRGLLKLHKHFEKVFGKVGKNMK--GEASKAKQLQRNPALAKQHVSQ-MDPKVVESLGGRAKVLEMISS--GAAGGGAGG 1506 MVLQELG KLT ALRRL T VV+ + + ++ D+CRAL+ESDV +++V LRK ++ K + D A +R+++Q+AV++EL ++D T PY+MKKG+SNV+MFVGLQ G+GKTTTIAK+A+Y+QRKGWK MVCADTFRAGAFDQLKQNATKLR PFYGSY+EADPVRIA+EGVQQF+ E YEVIIVDTSGRHKQE+ALF+EMKEIQ AV+PDN +MDATQGQAVFDQA+ FH+A VGSVI+TKLDGHAKGGGALSAVAAT +PI FLG GEHFDDL+ F+ SF+SRLLG GDM+G ++++ ++EG + +E M +R+ KGQFTLRD+Y+Q + MK+GP+ KVMGM+PG GE + + G K+ L MMDSMTD ELDGKVDL++SESR+ RIARGSG HP EV+ LLK + F ++F K+G M GE +Q+ RNP +S+ +DP++++ +GG +++M+ + G +GGG GG Sbjct: 1 MVLQELGDKLTGALRRLQTTTVVNDDVLNDLLQDVCRALVESDVNIKVVATLRKGIKEKVN--LAD-------APAGLNRRKMVQRAVMEELVRLVDSGTKPYQMKKGKSNVIMFVGLQ----GSGKTTTIAKYANYYQRKGWKTCMVCADTFRAGAFDQLKQNATKLRVPFYGSYTEADPVRIAEEGVQQFRSEGYEVIIVDTSGRHKQEEALFEEMKEIQAAVRPDNVVYVMDATQGQAVFDQAQGFHQAATVGSVIVTKLDGHAKGGGALSAVAATGAPIIFLGSGEHFDDLDVFNPGSFISRLLGLGDMRGFLEEVSSLGAREGGKERQEAMAQRLVKGQFTLRDMYEQFENVMKLGPLSKVMGMLPGFPSFLMGGGEGGRGGQDEAATGRLKRFLTMMDSMTDAELDGKVDLNKSESRVNRIARGSGAHPMEVQFLLKTYAQFSQMFKKMGPMMLKGGEGGIQRQMARNPGGVMNQLSKAVDPRMLQQMGGAKGMMDMMKAMGGGSGGGLGG 504
BLAST of mRNA_L-elsbetiae_contig158.4038.1 vs. uniprot
Match: A0A7S2WJL8_9STRA (Signal recognition particle 54 kDa protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJL8_9STRA) HSP 1 Score: 543 bits (1398), Expect = 1.310e-187 Identity = 292/497 (58.75%), Postives = 377/497 (75.86%), Query Frame = 1 Query: 1 MVLQELGSKLTSALRRLHTDKVVDKETIKAVVGDICRALLESDVKVQMVMKLRKNVEAKAETLVGDQQDGGRGASGAAQQRRLIQKAVVDELTGMLDPKTAPYKMKKGRSNVVMFVGLQASAFGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFKQEKYEVIIVDTSGRHKQEDALFDEMKEIQEAVQPDNTTLIMDATQGQAVFDQAKAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMKGLMQQIQESQEGSGDPKEMMERISKGQFTLRDLYKQLSSAMKMGPMGKVMGMIPGM--GEMAQMANNSGTQGMFKKNLYMMDSMTDDELDGKVDLSQSESRILRIARGSGTHPDEVRGLLKLHKHFEKVFGKVGKNMK---GEASKAKQLQRNPALAKQHVSQ-MDPKVVESLGGRAKVLEMI 1473 MVLQELG KL AL++LH VVD+E + A++ DI RALLE+DV V++V +L+++++ + A +RR+IQKAV++EL +L P PY+MK+G+ NV+MFVGLQ G+GKTTTIAK+A+Y+ RKG+K MVCADTFRAGA+DQLKQNATKLRCPFYGSY+EADPV+IA +GV+QFK EKYEVIIVDTSGRHKQE LF+EM+EI+ AV+PDN I+DATQGQAV DQA +FHEAV +GS +ITKLDGHAKGGGALSAVAAT +PITFLG GEHFDDLE F A+SFVSRLLG GDM+GL++ I+E+ +P E+M++ +KG FTLRD+Y+Q + MK+GP+ KVM MIPG+ G M Q A + + K+ +YMMDSMTD ELDG+VDL +S RI RI+RGSGTHP EV+ LL+ HK FE V K+GK+ G+A+ AKQ+ RNP Q + + MDP++++ +GG V++M+ Sbjct: 1 MVLQELGRKLEGALKKLHATTVVDEEVVTAMLNDIARALLEADVNVRVVGQLKQSIKMRVNL---------EEAPSGNNRRRMIQKAVMEELVAILQPDGEPYQMKRGKPNVIMFVGLQ----GSGKTTTIAKYANYYLRKGFKCCMVCADTFRAGAYDQLKQNATKLRCPFYGSYTEADPVQIAQDGVEQFKSEKYEVIIVDTSGRHKQESVLFEEMQEIRAAVEPDNIVFILDATQGQAVHDQASSFHEAVDIGSCVITKLDGHAKGGGALSAVAATGAPITFLGSGEHFDDLEPFRAESFVSRLLGMGDMRGLVETIKETVGDDKNP-ELMDKFAKGVFTLRDMYEQFQNVMKLGPLSKVMSMIPGIPQGLMGQ-AGDQESSNRLKRFMYMMDSMTDAELDGQVDLEKSPGRIERISRGSGTHPMEVQQLLRTHKQFEGVVKKMGKSSMLRGGDANMAKQISRNPNQCLQQIHKVMDPRMLQQMGGAQNVMKMM 482
BLAST of mRNA_L-elsbetiae_contig158.4038.1 vs. uniprot
Match: A0A7S3ZR98_9STRA (Signal recognition particle 54 kDa protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZR98_9STRA) HSP 1 Score: 538 bits (1385), Expect = 8.070e-186 Identity = 291/500 (58.20%), Postives = 382/500 (76.40%), Query Frame = 1 Query: 1 MVLQELGSKLTSALRRLHTDKVVDKETIKAVVGDICRALLESDVKVQMVMKLRKNVEAKA---ETLVGDQQDGGRGASGAAQQRRLIQKAVVDELTGMLDPKTAPYKMKKGRSNVVMFVGLQASAFGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFKQEKYEVIIVDTSGRHKQEDALFDEMKEIQEAVQPDNTTLIMDATQGQAVFDQAKAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMKGLMQQIQESQEGSGDPK--EMMERISKGQFTLRDLYKQLSSAMKMGPMGKVMGMIPGMGEMAQMANNSGTQGMFKKNLYMMDSMTDDELDGKVDLSQSESRILRIARGSGTHPDEVRGLLKLHKHFEKVFGKVGKN--MKG-EASKAKQLQRNPALAKQHVSQ-MDPKVVESLGGRAKVLEMI 1473 MVLQELG KLT+AL+++ + V+ +E + ++ DI ALLE+DV V++V +LRK ++ +A E + G A +R+LIQ+AVVDEL ++DP P+++KKG+ NV+MFVGLQ GAGKTTTIAKFA+Y+QRKG+K MVCADTFRAGA+DQLKQNATKLRCPFYGSY+EADPV IA EGV QF++EKYEVIIVDTSGRH+QE ALF+EM+EI+ A++PDN ++DATQGQAV +QA +FHEA+ +GSV++TKLDGHAKGGGALSAVAAT +PI FLG GEHFDD E F A+SFVSRLLG GDM L++QI+++ GD K EMME+ SKG+FTLRD+Y+Q + MK+GP+ KVM MIPG+ +M + G + K+ +YMMDSMTDDELDG+VDL+++ SR+ R+ARGSGTHP EV+ LL+ HK FE V K+GK+ MKG + KQ+QRNP Q + + MDP++++ +GG ++ M+ Sbjct: 1 MVLQELGGKLTAALQKMQSVTVISEEVLDKMLKDIAAALLEADVNVRVVGQLRKAIKTRAALEEEVAG------------ANRRKLIQRAVVDELVNIVDPGVTPHEVKKGKPNVIMFVGLQ----GAGKTTTIAKFANYYQRKGFKCCMVCADTFRAGAYDQLKQNATKLRCPFYGSYTEADPVAIAAEGVAQFRKEKYEVIIVDTSGRHRQEAALFEEMQEIRVAIEPDNVVFVLDATQGQAVHEQATSFHEAIDIGSVVVTKLDGHAKGGGALSAVAATGAPILFLGSGEHFDDFEPFVARSFVSRLLGMGDMSTLVKQIKDT---IGDDKNDEMMEKFSKGEFTLRDMYEQFENVMKLGPLSKVMAMIPGIPQMGGEGDEGGNR--LKRFMYMMDSMTDDELDGRVDLNRAPSRVDRVARGSGTHPMEVQMLLRCHKQFEGVVTKMGKSGLMKGGDEQMVKQMQRNPNQVLQQLHKTMDPRMLQQMGGAQNLMNMM 479
BLAST of mRNA_L-elsbetiae_contig158.4038.1 vs. uniprot
Match: A0A7R9W6K7_9STRA (Signal recognition particle 54 kDa protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W6K7_9STRA) HSP 1 Score: 538 bits (1387), Expect = 6.240e-185 Identity = 300/508 (59.06%), Postives = 382/508 (75.20%), Query Frame = 1 Query: 1 MVLQELGSKLTSALRRLHTDK-VVDKETIKAVVGDICRALLESDVKVQMVMKLRKNVEAKAETLVGDQQDGGRGASGAAQQRRLIQKAVVDELTGMLDPKT--APYKMKKGRSNVVMFVGLQASAFGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFKQEKYEVIIVDTSGRHKQEDALFDEMKEIQEAVQPDNTTLIMDATQGQAVFDQAKAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMKGLMQQIQESQEGSGDPK---EMMERISKGQFTLRDLYKQLSSAMKMGPMGKVMGMIPGMGE-MAQMANNSGTQGMFKKNLYMMDSMTDDELDGKVDLSQS-----ESRILRIARGSGTHPDEVRGLLKLHKHFEKVFGKVGKN-MKGEASKAKQLQ------RNPALAKQHVSQMDPKVVESLGGRAKVLE 1467 MVL ELG KL ++LR+L + VD + ++ DI RAL+E+DV V++VM LR NV+ + +V D G +SG+A RL+Q+AVVDELT ML P P+ M++G+ NV++FVGLQ GAGKTT+IAK+A+Y+QR+GWK AMVCADTFRAGAFDQLKQNATKLR PFYGSY+EADPV IA++GV QF E YEVIIVDTSGRH+QE ALF+EM+EI AV+PDNT +MDATQGQAV+DQA AF EAV VGSVI+TKLDGHAKGGGALSAVAAT+SPI FLG GEHFDD + F+A+SFVS+LLG+GD++GLM++++ Q DPK E+ME+++KGQFTLRD+Y Q + MKMG MGKVMGM+PG+ E + + + + KK +YMMDSMTD ELDGKVD+ + ESRI RIA+GSGTHP EV+ LL+ HK FE V K+GK+ M G+A A+Q Q +NPAL +Q + MDP V++S+GG +++ Sbjct: 1 MVLAELGGKLRNSLRKLSSGGGSVDTALLNEILSDIGRALIEADVNVKLVMSLRTNVKNRVGKIVED--SAGAESSGSANVSRLVQRAVVDELTSMLTPNADVKPHTMRRGKPNVILFVGLQ----GAGKTTSIAKYANYYQRRGWKTAMVCADTFRAGAFDQLKQNATKLRVPFYGSYTEADPVAIAEDGVAQFADEGYEVIIVDTSGRHRQESALFEEMQEISSAVRPDNTVFVMDATQGQAVYDQALAFQEAVDVGSVIVTKLDGHAKGGGALSAVAATDSPIIFLGSGEHFDDFDPFNAKSFVSKLLGYGDVRGLMEEMKSVQ----DPKTQEELMEKMAKGQFTLRDMYNQFQNMMKMGGMGKVMGMMPGIPEYLIPKSGDDESTRRLKKFMYMMDSMTDKELDGKVDMHKKGDPTVESRIRRIAKGSGTHPKEVQMLLQCHKQFEGVVSKMGKSGMMGKAGSARQKQVMEQMRKNPALMQQQLKNMDPNVLKSMGGSGNMMQ 498
BLAST of mRNA_L-elsbetiae_contig158.4038.1 vs. uniprot
Match: A0A1E7FHW5_9STRA (SRP54-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHW5_9STRA) HSP 1 Score: 526 bits (1356), Expect = 4.290e-181 Identity = 291/515 (56.50%), Postives = 369/515 (71.65%), Query Frame = 1 Query: 1 MVLQELGSKLTSALRRLHTDKV-VDKETIKAVVGDICRALLESDVKVQMVMKLRKNVEAKAETLV--------GDQQDGGRGASGAAQQRRLIQKAVVDELTGMLDPKTAPYKMKKGRSNVVMFVGLQASAFGAGKTTTIAKFAHYWQRKGWKVAMVCADTFRAGAFDQLKQNATKLRCPFYGSYSEADPVRIADEGVQQFKQEKYEVIIVDTSGRHKQEDALFDEMKEIQEAVQPDNTTLIMDATQGQAVFDQAKAFHEAVAVGSVIITKLDGHAKGGGALSAVAATNSPITFLGGGEHFDDLEAFDAQSFVSRLLGFGDMKGLMQQIQESQEGSGDPKEMMERISKGQFTLRDLYKQLSSAMKMGPMGKVMGMIPGMGE-MAQMANNSGTQGMFKKNLYMMDSMTDDELDGKVDLSQSE-----SRILRIARGSGTHPDEVRGLLKLHKHFEKVFGKVGKN-MKGEASKAKQLQ------RNPALAKQHVSQMDPKVVESLGGRAKVLEMISS 1479 MVL ELG KL +LR+LHT V + +V+ D+ RAL+ESDV V++VM LR NV+ K E L+ A+ +++QKAVVDELT +L+P P+ MK+G+ NV++FVGLQ GAGKTTTIAK+A+Y+Q++GWK AMVCADTFRAGAFDQLKQNATKLR PFYGSY++ADPV IA+EGV QF +E YEVIIVDTSGRH+QE L +EM+EI AV PDN L+MDATQGQ+++DQA AF AV VGSV+ITKLDGHAKGGGALSAVAAT SPI FLG GEHFDDLE F+AQSFVS+LLG GD++GLM+ + + +E+ME++SKG+FTLRD+Y Q M MGP+ KVMGM+PGM E + + + KK LYMMDSMTD ELDGKVD S + SRI RIA GSGTHP EV+ LL++HK FE + K+GK+ M G+ ++A+Q Q +NP Q ++QMDPK++ +GGR +V + + + Sbjct: 1 MVLAELGGKLRDSLRKLHTRSGRVTTTQLNSVLSDVARALIESDVSVKLVMTLRDNVKQKVERLIEXXXXXXXXXXXXXXXXEQRASNVSKMVQKAVVDELTSLLEPARKPHTMKRGKPNVILFVGLQ----GAGKTTTIAKYANYYQKRGWKTAMVCADTFRAGAFDQLKQNATKLRVPFYGSYTQADPVAIAEEGVDQFIKEHYEVIIVDTSGRHRQEAGLLEEMQEISAAVDPDNVILVMDATQGQSLYDQALAFSNAVDVGSVVITKLDGHAKGGGALSAVAATESPIVFLGSGEHFDDLEPFNAQSFVSKLLGLGDVRGLMEAMNGAGPDGKTHEELMEKMSKGEFTLRDMYSQFQRVMNMGPLNKVMGMVPGMPEYLVPKGGDDNSNTRLKKFLYMMDSMTDKELDGKVDFSDHDDAPIQSRIRRIAAGSGTHPKEVQMLLQVHKQFEGMVNKMGKSGMMGKQAQAQQQQMVAQMRKNPNFINQRLNQMDPKMLAQMGGREQVKQQMEA 511 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig158.4038.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig158.4038.1 >prot_L-elsbetiae_contig158.4038.1 ID=prot_L-elsbetiae_contig158.4038.1|Name=mRNA_L-elsbetiae_contig158.4038.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=503bp MVLQELGSKLTSALRRLHTDKVVDKETIKAVVGDICRALLESDVKVQMVMback to top mRNA from alignment at L-elsbetiae_contig158:26943..37480- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig158.4038.1 ID=mRNA_L-elsbetiae_contig158.4038.1|Name=mRNA_L-elsbetiae_contig158.4038.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10538bp|location=Sequence derived from alignment at L-elsbetiae_contig158:26943..37480- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig158:26943..37480- >mRNA_L-elsbetiae_contig158.4038.1 ID=mRNA_L-elsbetiae_contig158.4038.1|Name=mRNA_L-elsbetiae_contig158.4038.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3018bp|location=Sequence derived from alignment at L-elsbetiae_contig158:26943..37480- (Laminarionema elsbetiae ELsaHSoW15)back to top |