mRNA_L-elsbetiae_contig1577.4024.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1577.4024.1 vs. uniprot
Match: D7G975_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G975_ECTSI) HSP 1 Score: 432 bits (1112), Expect = 8.900e-144 Identity = 198/310 (63.87%), Postives = 233/310 (75.16%), Query Frame = 3 Query: 138 AQPGFLGCHADSMTDRVLEAKWSDSKMTTLVCASYCRDQSPSYVFYATQFGKECWCQDSDIDLRHGDGTCDFACSGDSSAVCGGFDAFSLYDLALAEFPTPPTDSNYAGCYADDRNDRVLGAMTASDDMTPEVCASYCVSESSSNMFYATQYGSECWCAADVELRHGTGVCDFACTGDAGTTCGGFDAFDLFELEGDGPPXXXXXXXXTEDYYLGCFADEMLDRVLEDKDTTSTLTLEACEAYCMDLEQPFFALQYGEECWCGGCELLEEGPDRYDRHGTASCADYPCSGDATRQCGGFDAFSLYYRGTC 1067 AQPG LGC+ D +DRVL A WS MT VCA+YC +S SY +YA Q+G ECWCQD+DIDLRHG+ TCD+ACSGD+S CGGF AF+LYDL A PTPP D NY GC+ADD DRVLGA T+S MT E CA YC +ES NM+YATQYG++CWCA +V+LRHG G C +ACTGDA TTCGGF+AFDLFE+ PP TEDYY+GCFAD++ DRVLED + +TLEACE +C + +PFFALQY ECWCGGCE+L++GPD+YDRHG C D+PCSGD TRQCGG AFSLY R TC Sbjct: 276 AQPGSLGCYKDDPSDRVLTAMWSSPVMTPSVCAAYCHRESASYAYYAIQYGGECWCQDTDIDLRHGEATCDYACSGDASISCGGFYAFTLYDLEGANLPTPPADDNYVGCFADDLQDRVLGAETSSSSMTSEACADYCANESPRNMYYATQYGAQCWCAEEVDLRHGEGRCAYACTGDAKTTCGGFEAFDLFEVNPLSPP--------TEDYYVGCFADDLEDRVLEDMISAVDMTLEACENHCTERNKPFFALQYSVECWCGGCEILDDGPDKYDRHGAGVCNDFPCSGDPTRQCGGLVAFSLYERDTC 577
BLAST of mRNA_L-elsbetiae_contig1577.4024.1 vs. uniprot
Match: D8LQX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX7_ECTSI) HSP 1 Score: 407 bits (1046), Expect = 2.210e-131 Identity = 186/286 (65.03%), Postives = 222/286 (77.62%), Query Frame = 3 Query: 216 MTTLVCASYCRDQSPSYVFYATQFGKECWCQDSDIDLR-HGDGTCDFACSGDSSAVCGGFDAFSLYDLALAEFPTPPTDSNYAGCYADDRNDRVLGAMTASDDMTPEVCASYCVSESSSNMFYATQYGSECWCAADVELRHGTGVCDFACTGDAGTTCGGFDAFDLFELEGDGPPXXXXXXXXTEDYYLGCFADEMLDRVLEDKDTTSTLTLEACEAYCMDLEQPFFALQYGEECWCGGCELLEEGPDRYDRHGTASCADYPCSGDATRQCGGFDAFSLYYRGTCD 1070 MT VCA YCR Q SY YATQ+G+ECWCQD +DLR HG TCD+ CSGD S VCGGFD+FSLYDL E P+PPTD NY GC+ADD+NDRVLGA ++S++MT E CASYC ES N +YATQ+G ECWCAA+V LRHG G CD ACTGDAGTTCGGFDAFDLFEL GP +ED+Y GCFAD+ DRVL DK ++ ++L+ CE YC +++PFFALQ+G ECWCGGC+LL+EG R+DRHGTASC D+PC+G+A+R CG +DAFSLYYRGTC+ Sbjct: 1 MTPTVCADYCRGQPSSYTHYATQYGRECWCQDESVDLRRHGAATCDYQCSGDDSIVCGGFDSFSLYDLEEGELPSPPTDDNYVGCFADDQNDRVLGAKSSSNEMTSEACASYCADESPGNTYYATQWGHECWCAAEVHLRHGDGTCDMACTGDAGTTCGGFDAFDLFEL---GP------LSPSEDHYFGCFADDKSDRVLGDKMSSGDMSLQLCEDYCTAMDKPFFALQWGRECWCGGCDLLDEG-HRFDRHGTASCTDHPCTGEASRDCGAYDAFSLYYRGTCE 276
BLAST of mRNA_L-elsbetiae_contig1577.4024.1 vs. uniprot
Match: D7FQI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI3_ECTSI) HSP 1 Score: 381 bits (978), Expect = 7.280e-118 Identity = 182/315 (57.78%), Postives = 218/315 (69.21%), Query Frame = 3 Query: 150 FLGCHADSMTDRVLEAKWSDSKMTTLVCASYCRDQSPSYVFYATQFGKECWCQDSDIDLRHGDGTCDFACSGDSSAVCGGFDAFSLYDLALAEFPTPPTDSNYAGCYADDRNDRVLGAMTASDDMTPEVCASYCVSESSSNMFYATQYGSECWCAADVEL-RHGTGVCDFACTGDAGTTCGGFDAFDLFELEGDG--PPXXXXXXXXTEDYYLGCFADEMLDRVLEDKDTTSTLTLEACEAYCMDLEQPFFALQYGEECWCGGCELLEEGPDRYDRHGTASCADYPCSGDATRQCGGFDAFSLYYRGTCDPTTVT 1085 ++GC AD DRVL +K S MT ECWCQ DIDLRHGDGTCD+ CSGDSS CGGFD+F+LY+L P P NY GC+ADD+ DRVLG+ +S MTPEVCA+YC +S S+ +YATQ+G ECWCA DV+ RHG G CD+ CTGD+GTTCGG+DAFDLF+LE D PP +EDYYLGCFAD+ DRVLEDK + S +TLE CE +C L++PFFALQ+G+ECWCGGCEL ++ DRYDRHG ASC DYPC+GD +RQCGG+D+FSLY R TCD T T Sbjct: 103 YVGCFADDKEDRVLGSKMSSGSMTP-----------------------ECWCQGPDIDLRHGDGTCDYVCSGDSSIKCGGFDSFTLYELESEGLPVAPMGDNYVGCFADDKEDRVLGSKMSSGSMTPEVCAAYCADDSPSHTYYATQWGRECWCARDVDYSRHGEGSCDYTCTGDSGTTCGGYDAFDLFKLEEDSLSPP--------SEDYYLGCFADDKGDRVLEDKISASDMTLETCEEHCTALDKPFFALQWGKECWCGGCELQDDDLDRYDRHGIASCTDYPCTGDGSRQCGGYDSFSLYNRDTCDDTVCT 386
BLAST of mRNA_L-elsbetiae_contig1577.4024.1 vs. uniprot
Match: A0A6H5JLL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL4_9PHAE) HSP 1 Score: 327 bits (839), Expect = 3.760e-98 Identity = 155/272 (56.99%), Postives = 193/272 (70.96%), Query Frame = 3 Query: 264 YVFYATQFGKECWCQDSDIDLRHGDGTCDFACSGDSSAVCGGFDAFSLYDLALAEFPTPPTDSNYAGCYADDRNDRVLGAMTASDDMTPEVCASYCVSESSSNMFYATQYGSECWCAADVELRHGTGVCDFACTGDAGTTCGGFDAFDLFELE---GDGPPXXXXXXXXTEDYYLGCFADEMLDRVLEDKDTTSTLTLEACEAY-CMDLEQPFFALQYGEECWCGGCELLEEGPDRYDRHGTASCADYPCSGDATRQCGGFDAFSLYYRGTC 1067 Y+ + F ++CWCQD +IDLRHG+GTCD+AC+GD S VCGG +FSLY+L A PT PTD +Y GC+ADDR DRVLG T+S +MT EVCA+YC +ES N FYATQYG ECWCA V+LR+G G CD+ACTG TTCGGF+AFDLFEL+ PP +E YYLGCFAD+ DRVLED+ ++ ++L+ ++ C+ A ++ CWCGGCELL+EG RYDRHG SC YPC+G+ +R CGG AFSLYYRGTC Sbjct: 16 YLIVPSLFSRQCWCQDENIDLRHGEGTCDYACTGDGSVVCGGILSFSLYELEEAILPTAPTDDSYVGCFADDRQDRVLGVQTSSSEMTSEVCAAYCANESFGNKFYATQYGEECWCAPSVDLRYGEGTCDYACTGAVETTCGGFEAFDLFELDVVDRSSPP--------SEHYYLGCFADDQNDRVLEDETSSGNMSLQVSPSHNCLGANN---AAEH--TCWCGGCELLDEGLHRYDRHGATSCTGYPCTGEGSRACGGVYAFSLYYRGTC 274
BLAST of mRNA_L-elsbetiae_contig1577.4024.1 vs. uniprot
Match: D7FRS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS1_ECTSI) HSP 1 Score: 218 bits (555), Expect = 7.530e-59 Identity = 131/327 (40.06%), Postives = 182/327 (55.66%), Query Frame = 3 Query: 153 LGCHADSMTDRVLE-AKWSDSKMTTLVCASYCRDQSPSYVFYATQFGKECWCQDSDIDLR-HGDGT-CDFACSGDSSAVCGGFDAFSLYDLALAEFPTP---PTDSNYA----GCYADDRNDRVLGAMTASDD-MTPEVCASYCVSESSSNMFYATQYGSECWCA---ADVELRHGTGVCDFACTGDAGTTCGGFDAFDLFELEGDGPPXXXXXXXXTE--DYYLGCFADEMLDRVLEDKDTT-STLTLEACEAYCMDLEQPFFALQYGEECWCGGCELLEEGPDRYDRHGTASCADYPCSGDATRQCGGFDAFSLY-YRGTCDPTT 1079 LGC+ D DR+++ SD+ MTT +C C Q+ ++ATQ+G+ECWC + D HG+ T C +AC GD+ CGGFDA ++Y A P+P PT + GCY DDR DR++ + SD+ MT E+C C+ N+++ATQYG ECWC AD L + C +AC GDA TCGGFDA +++ +G+ P + LGC+ D+ DR+++D + + +T E CE C L +FA QYG ECWCG G D Y HG ++ Y C+GDA + CGGFDA ++Y Y G PTT Sbjct: 528 LGCYEDDREDRIMDDLALSDNAMTTELCELTCNGQT----YFATQYGRECWCGSAGADYTLHGESTDCTYACVGDADQTCGGFDAANVYLYAAESTPSPTPSPTADDAGPLALGCYEDDREDRIMDDLALSDNAMTTELCEQTCLG----NIYFATQYGQECWCGSAGADYILHGESADCTYACAGDADQTCGGFDAANVYLYKGESTPSPTPSPTADDASPLSLGCYEDDREDRIMDDLALSDNAMTTELCEQTC--LGNTYFATQYGRECWCGSA-----GAD-YILHGESADCTYACAGDADQTCGGFDAANVYLYTGDDVPTT 838
BLAST of mRNA_L-elsbetiae_contig1577.4024.1 vs. uniprot
Match: D7FRS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS2_ECTSI) HSP 1 Score: 199 bits (507), Expect = 1.510e-54 Identity = 124/318 (38.99%), Postives = 171/318 (53.77%), Query Frame = 3 Query: 153 LGCHADSMTDRVLE-AKWSDSKMTTLVCASYCRDQSPSYVFYATQFGKECWCQDSDIDLR-HGDGT-CDFACSGDSSAVCGGFDAFSLYDLALAEFPTPPTDSNYA--------GCYADDRNDRVLGAMTASD-DMTPEVCASYCVSESSSNMFYATQYGSECWCA---ADVELRHGTGVCDFACTGDAGTTCGGFDAFDLFELEGDGPPXXXXXXXXTEDYYLGCFADEMLDRVLEDKDT-TSTLTLEACEAYCMDLEQPFFALQYGEECWCGGC--ELLEEGPDRYDRHGTASCADYPCSGDATRQCGGFDAFSLY 1052 LGC+ D DR+++ SD MTT +C C + ++ATQ+G+ECWC + D HG+ C +AC+GD+ CGGFDA ++Y L E PT S A GCY DDR +R++ + SD MT E+C C+ N F+ATQYG ECWC AD L + C +AC GDA TCGGFDA +++ GD + ++GC+ DE R++E T +S++T E CEA C +F +QYG EC+CGG +LL+ HG ++ DY C GD+ CGGF A S+Y Sbjct: 221 LGCYEDDREDRIMDDLALSDYSMTTELCEQTCVGNT----YFATQYGRECWCGSAGADYASHGESADCTYACAGDADETCGGFDAANVY-LYTGESTPSPTPSPTADESGPLSLGCYEDDRENRIMDDLALSDFSMTTELCEQTCLG----NTFFATQYGRECWCGSAGADYTLHGESTDCTYACAGDADQTCGGFDAANVYLYTGD--------DALSTSTFVGCYQDESDARIMELALTDSSSMTKEMCEAECTG--STYFGMQYGRECFCGGSSTDLLQ--------HGESTACDYECPGDSDELCGGFYAMSVY 511
BLAST of mRNA_L-elsbetiae_contig1577.4024.1 vs. uniprot
Match: D8LEL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL0_ECTSI) HSP 1 Score: 183 bits (465), Expect = 6.160e-51 Identity = 116/308 (37.66%), Postives = 162/308 (52.60%), Query Frame = 3 Query: 174 MTDRVLEAKWSDSKMTTLVCASYCRDQSPSYVFYATQFGKECWCQDSDIDLR-HGDGT-CDFACSGDSSAVCGGFDAFSLYDLALAEFPTPPTDSNYA------GCYADDRNDRVLGAMTASDD-MTPEVCASYCVSESSSNMFYATQYGSECWCA---ADVELRHGTGVCDFACTGDAGTTCGGFDAFDLFELEGDGPPXXXXXXXXTEDYYLGCFADEMLDRVLEDKDT-TSTLTLEACEAYCMDLEQPFFALQYGEECWCGG--CELLEEGPDRYDRHGTASCADYPCSGDATRQCGGFDAFSLY 1052 M D VL SD+ MTT +C C +++ATQ+G+ECWC D HG+ T C +ACSGD+ CGGFDA ++Y P+ A GCY DDR R++ + SD MT E+C C+ + ++ATQYG ECWC AD L + C + C+GDA CGGFDA +++ G+ + +GC+ DE R++E T TS++T+E CEA C +F +QYG EC+CGG +LL+ HG ++ DY C GD+ + CGGF A S+Y Sbjct: 1 MDDLVL----SDASMTTELCEQTCVGS----IYFATQYGRECWCGSVGADYTVHGESTDCTYACSGDADQTCGGFDAANVYRYTDDSTPSXXXXXTEAAPFVALGCYGDDREARIMDDLVLSDSSMTTELCELTCLGST----YFATQYGRECWCGSDGADYALHGESTECTYPCSGDADQLCGGFDAANVYLFTGE----------TSTSSLVGCYQDESDARIMEFALTDTSSMTMEMCEAECSG--NTYFGMQYGTECFCGGESTDLLQ--------HGESTACDYECPGDSEQVCGGFYAMSVY 276
BLAST of mRNA_L-elsbetiae_contig1577.4024.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI) HSP 1 Score: 192 bits (488), Expect = 8.890e-50 Identity = 109/240 (45.42%), Postives = 136/240 (56.67%), Query Frame = 3 Query: 39 LTSPVNERPHTMNMPAIKGLSGLSFLLAIGGAQAQPGFLGCHADSMTDRVLEAKWSDSKMTTLVCASYCRDQSPSYVFYATQFGKECWCQ-DSDIDL-RHGDGTCDFACSGDSSAVCGGFDAFSLYDLALAEFPTPPTDSNYAGCYADDRNDRVLG-AMTASDDMTPEVCASYCVSESSSNMFYATQYGSECWCAADVE----LRHGTGVCDFACTGDAGTTCGGFDAFDLFELEGDGPP 737 + +PV E P TM P +G S ++GC ADS DRV E + S MTT VC YC D+ +Y+ ATQ+G ECWC D++++ RH DG CD AC GD++ +CGGFDAF LY + PT PT Y GC+ADDR DR+LG + DMT VC +YC E FYATQYG ECWC + RHG G C C+GD CGGFDAF+LF+ +G P Sbjct: 416 VAAPVYEMPVTM--PVDEGYS----------------YVGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYM--ATQYGYECWCSVDAEVEYDRHSDGVCDHACGGDAADICGGFDAFDLYKITE---PTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQAVCRTYC--EERDAYFYATQYGDECWCGMSNDEEDYKRHGRGSCLAGCSGDPTVACGGFDAFNLFKFDGIAEP 630
BLAST of mRNA_L-elsbetiae_contig1577.4024.1 vs. uniprot
Match: A0A6H5JMV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV6_9PHAE) HSP 1 Score: 171 bits (434), Expect = 2.650e-44 Identity = 99/227 (43.61%), Postives = 121/227 (53.30%), Query Frame = 3 Query: 150 FLGCHADSMTDRVLEAKWSDSKMTTLVCASYCRDQSPSYVFYATQFGKECWCQ-DSDIDL-RHGDGTCDFACSGDSSAVCGGFDAFSLYDLALAEFPTPPTDSNYAGCYADDRNDRVLG-AMTASDDMTPEVCASYCVSESSSNMFYATQYGSECWCAADVE----LRHGTGVCDFACTGDAGTTCG------------------------GFDAFDLFELEGDGPP 737 ++GC ADS DRV E + MTT VC YC D+ + F ATQFG ECWC D++I+ RH DG CD C G+++ +CGGFDAF LY + PT PT Y GC+ADDR DR+LG + DMT VC +YC E FYATQYG ECWC + RHG G C C+GD CG GFDAF+LF+ +G P Sbjct: 13 YVGCFADSKDDRVFEYMKTSPTMTTAVCLEYCLDRRAT--FMATQFGIECWCSVDAEIEYDRHSDGVCDCECGGEATDICGGFDAFDLYKITE---PTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQTVCRTYC--EERDAYFYATQYGDECWCGMSEDEQDYKRHGRGSCLAGCSGDPTVACGRDFQVVIYKHESFQPFLAVTLVPGGFDAFNLFKFDGVAEP 232
BLAST of mRNA_L-elsbetiae_contig1577.4024.1 vs. uniprot
Match: A0A6H5JX48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX48_9PHAE) HSP 1 Score: 164 bits (414), Expect = 4.060e-40 Identity = 109/317 (34.38%), Postives = 152/317 (47.95%), Query Frame = 3 Query: 153 LGCHADSMTDRVL-EAKWSDSKMTTLVCASYCRDQSPSYVFYATQFGKECWCQDSDIDLR-HGDGT-CDFACSGDSSAVCGGFDAFSLYDLALAEFPTP-PTDSNYA-----GCYADDRNDRVLGAMTASD-DMTPEVCASYCVSESSSNMFYATQYGSECWCA---ADVELRHGTGVCDFACTGDAGTTCGGFDAFDLFELEGDGPPXXXXXXXXTEDYY-LGCFADEMLDRVLED---KDTTSTLTLEACEAYCMDLEQPFFALQYGEECWCGGCELLEEGPDRYDRHGTASCADYPCSGDATRQCGGFDAFSLY 1052 LGC+ D R++ E SDS MTT ECWC + D HG+ T C +ACSGD+ CGGFDA ++Y P P P+ + A GCY DDR DR++ + SD MT E+C C+ N ++ATQYGSECWC AD + + +C +AC+GDA TCGG+DA +++ +G P + LGC+ D+ R++++ D++ T ECWCG G D Y HG ++ YPC+GDA + CGGFDA ++Y Sbjct: 384 LGCYGDDPEARIMDELVLSDSSMTT-----------------------ECWCGSAGADYAVHGESTDCTYACSGDTDQTCGGFDAANVYRYPDGSTPNPTPSPTEAASFVALGCYEDDREDRIMDELVLSDPSMTTELCELTCLG----NTYFATQYGSECWCGSAGADYAVHGESTICTYACSGDADQTCGGYDAANVYRYTAEGTPSPTPSPTEAGSHLALGCYEDDREARIMDELVLSDSSMTT-----------------------ECWCGSA-----GAD-YALHGESTDCTYPCAGDADQMCGGFDAANVY 644 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1577.4024.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1577.4024.1 >prot_L-elsbetiae_contig1577.4024.1 ID=prot_L-elsbetiae_contig1577.4024.1|Name=mRNA_L-elsbetiae_contig1577.4024.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=448bp MNMPAIKGLSGLSFLLAIGGAQAQPGFLGCHADSMTDRVLEAKWSDSKMTback to top mRNA from alignment at L-elsbetiae_contig1577:13327..21193+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1577.4024.1 ID=mRNA_L-elsbetiae_contig1577.4024.1|Name=mRNA_L-elsbetiae_contig1577.4024.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7867bp|location=Sequence derived from alignment at L-elsbetiae_contig1577:13327..21193+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1577:13327..21193+ >mRNA_L-elsbetiae_contig1577.4024.1 ID=mRNA_L-elsbetiae_contig1577.4024.1|Name=mRNA_L-elsbetiae_contig1577.4024.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2688bp|location=Sequence derived from alignment at L-elsbetiae_contig1577:13327..21193+ (Laminarionema elsbetiae ELsaHSoW15)back to top |