mRNA_L-elsbetiae_contig15741.4009.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15741.4009.1 vs. uniprot
Match: D8LP03_ECTSI (LETM1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP03_ECTSI) HSP 1 Score: 146 bits (368), Expect = 2.970e-39 Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 1 Query: 25 QGSILKPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLLKMYTEVEKKV 252 QGSIL PREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFP+FFPSTYTDRRQNLLKMYTEVEKKV Sbjct: 504 QGSILNPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFPNFFPSTYTDRRQNLLKMYTEVEKKV 579
BLAST of mRNA_L-elsbetiae_contig15741.4009.1 vs. uniprot
Match: A0A6H5LQ87_9PHAE (LETM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQ87_9PHAE) HSP 1 Score: 143 bits (360), Expect = 8.390e-38 Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 1 Query: 25 QGSILKPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLLKMYTEVEKKV 252 QGSIL PREVRTLRRTAKDCVTFIPFV+ILI PL+PVGHVLVFSFIQRFFP+FFPSTYTDRRQNLLKMYTEVEKKV Sbjct: 687 QGSILNPREVRTLRRTAKDCVTFIPFVVILIFPLTPVGHVLVFSFIQRFFPNFFPSTYTDRRQNLLKMYTEVEKKV 762
BLAST of mRNA_L-elsbetiae_contig15741.4009.1 vs. uniprot
Match: A0A836CA55_9STRA (LETM1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA55_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.770e-32 Identity = 63/82 (76.83%), Postives = 71/82 (86.59%), Query Frame = 1 Query: 7 IMFVGK--QGSILKPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLLKMYTEVEK 246 + VGK QG LKPREVRTLRR+ KD +T IP +IILI+PLSPVGHVLVFSFIQR+FPDFFPST+T+RRQNLLKMY EVEK Sbjct: 188 LALVGKAIQGYTLKPREVRTLRRSGKDLLTLIPTIIILILPLSPVGHVLVFSFIQRYFPDFFPSTFTERRQNLLKMYEEVEK 269
BLAST of mRNA_L-elsbetiae_contig15741.4009.1 vs. uniprot
Match: L1IDU4_GUITC (LETM1 domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IDU4_GUITC) HSP 1 Score: 123 bits (309), Expect = 6.690e-31 Identity = 58/81 (71.60%), Postives = 70/81 (86.42%), Query Frame = 1 Query: 1 IKIMFVGKQGSILKPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLLKMYTEVE 243 ++++ G L+PREVRTLRRTAKD +TFIPF+IIL+IPLSPVGHVLVFSFIQRFFPDFFP+ YTDRRQNL+++Y VE Sbjct: 613 VRLIIKAALGDTLQPREVRTLRRTAKDLITFIPFIIILLIPLSPVGHVLVFSFIQRFFPDFFPTPYTDRRQNLMRIYQSVE 693
BLAST of mRNA_L-elsbetiae_contig15741.4009.1 vs. uniprot
Match: A0A7S1R4U4_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R4U4_ALECA) HSP 1 Score: 112 bits (281), Expect = 1.900e-30 Identity = 51/68 (75.00%), Postives = 65/68 (95.59%), Query Frame = 1 Query: 37 LKPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLLKMYTEV 240 LKPREVR L+RTAKD VTF+PF+IILIIP++P+GHVLVFSFIQ+FFPDFFPST+T+RRQN++K+Y ++ Sbjct: 39 LKPREVRALQRTAKDVVTFVPFLIILIIPMTPIGHVLVFSFIQKFFPDFFPSTFTERRQNVVKIYQDI 106
BLAST of mRNA_L-elsbetiae_contig15741.4009.1 vs. uniprot
Match: A0A7S2SGM0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGM0_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.870e-29 Identity = 58/80 (72.50%), Postives = 67/80 (83.75%), Query Frame = 1 Query: 7 IMFVGK--QGSILKPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLLKMYTEV 240 + +GK QG+ L PRE RTLRRTAKD VT +PFVIIL+IPLSPVGHVLVFSFIQR FPDF PSTYT+RRQNL+K+Y + Sbjct: 267 VSLLGKAVQGTTLAPREARTLRRTAKDLVTLVPFVIILLIPLSPVGHVLVFSFIQRVFPDFMPSTYTERRQNLMKLYEAI 346
BLAST of mRNA_L-elsbetiae_contig15741.4009.1 vs. uniprot
Match: A0A7S0U8H3_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U8H3_HEMAN) HSP 1 Score: 118 bits (295), Expect = 3.350e-29 Identity = 59/73 (80.82%), Postives = 62/73 (84.93%), Query Frame = 1 Query: 25 QGSILKPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLLKMYTEVE 243 +G L PREVRTLRR KD TFIPF+IILIIPLSPVGHVLVFSFIQRFFPDFFPS YTDRRQ LL+MY VE Sbjct: 432 RGQTLSPREVRTLRRAFKDTTTFIPFIIILIIPLSPVGHVLVFSFIQRFFPDFFPSPYTDRRQKLLRMYQAVE 504
BLAST of mRNA_L-elsbetiae_contig15741.4009.1 vs. uniprot
Match: A0A7S1NU99_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NU99_9EUGL) HSP 1 Score: 118 bits (296), Expect = 3.900e-29 Identity = 58/75 (77.33%), Postives = 68/75 (90.67%), Query Frame = 1 Query: 25 QGSILKPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLLKMYTEVEKK 249 +G LK REVRT+RRT KD +TFIP VIIL+IPLSP+GHVLVFSFIQRFFP+FFPS+++DRRQNLLKMY E+EKK Sbjct: 657 EGYTLKAREVRTVRRTMKDFLTFIPTVIILLIPLSPIGHVLVFSFIQRFFPEFFPSSFSDRRQNLLKMYEEIEKK 731
BLAST of mRNA_L-elsbetiae_contig15741.4009.1 vs. uniprot
Match: A0A4D9D1V1_9STRA (LETM1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1V1_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.350e-28 Identity = 57/75 (76.00%), Postives = 65/75 (86.67%), Query Frame = 1 Query: 25 QGSILKPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLLKMYTEVEKK 249 QG LKPREVRTL+RTAKD +T IPF IILI PL+P+GHVLVFS IQR FPDFFPST+T+RRQNL KMY E++KK Sbjct: 640 QGYTLKPREVRTLQRTAKDLLTLIPFTIILIFPLTPIGHVLVFSLIQRIFPDFFPSTFTERRQNLSKMYDEIDKK 714
BLAST of mRNA_L-elsbetiae_contig15741.4009.1 vs. uniprot
Match: A0A7S2X822_9EUKA (Hypothetical protein n=2 Tax=Lotharella TaxID=74819 RepID=A0A7S2X822_9EUKA) HSP 1 Score: 109 bits (273), Expect = 1.540e-28 Identity = 51/75 (68.00%), Postives = 65/75 (86.67%), Query Frame = 1 Query: 28 GSILKPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLLKMYTEVEKKV 252 G LKPRE R L+RTAKD +T +PF IIL+IPL+PVGHVLVFS IQ+FFPDF+PS YT+RRQNL+++Y E+E+K+ Sbjct: 99 GDTLKPREARMLQRTAKDLLTLLPFTIILLIPLTPVGHVLVFSAIQKFFPDFYPSPYTERRQNLVRLYQEIEQKL 173 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15741.4009.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15741.4009.1 >prot_L-elsbetiae_contig15741.4009.1 ID=prot_L-elsbetiae_contig15741.4009.1|Name=mRNA_L-elsbetiae_contig15741.4009.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=85bp MFVGKQGSILKPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFback to top mRNA from alignment at L-elsbetiae_contig15741:142..1219+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15741.4009.1 ID=mRNA_L-elsbetiae_contig15741.4009.1|Name=mRNA_L-elsbetiae_contig15741.4009.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1078bp|location=Sequence derived from alignment at L-elsbetiae_contig15741:142..1219+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15741:142..1219+ >mRNA_L-elsbetiae_contig15741.4009.1 ID=mRNA_L-elsbetiae_contig15741.4009.1|Name=mRNA_L-elsbetiae_contig15741.4009.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=510bp|location=Sequence derived from alignment at L-elsbetiae_contig15741:142..1219+ (Laminarionema elsbetiae ELsaHSoW15)back to top |