mRNA_L-elsbetiae_contig15710.3993.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15710.3993.1 vs. uniprot
Match: D7G234_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G234_ECTSI) HSP 1 Score: 130 bits (328), Expect = 2.010e-35 Identity = 64/85 (75.29%), Postives = 73/85 (85.88%), Query Frame = 1 Query: 28 KVQNIARPSRSLLEIIRESWIEENGSTPSGNADEASQALWESSFNTLPLFTEEDKAYVATMKDKGKEDRGIKAVARRFEEEIIEV 282 KVQNI RPSRSLLEII+ESWIEENGSTP GNADEASQA+WE + N +PLFTEED A VA K+KGKEDRG+K +A RFE EI+E+ Sbjct: 173 KVQNITRPSRSLLEIIKESWIEENGSTPDGNADEASQAVWEHAINVVPLFTEEDLAVVAEWKEKGKEDRGLKKIAGRFENEILEI 257
BLAST of mRNA_L-elsbetiae_contig15710.3993.1 vs. uniprot
Match: A0A0F5YGI1_9CYAN (Nuclease subunit of the excinuclease complex n=1 Tax=Limnoraphis robusta CS-951 TaxID=1637645 RepID=A0A0F5YGI1_9CYAN) HSP 1 Score: 72.8 bits (177), Expect = 5.930e-14 Identity = 41/93 (44.09%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 4 KNQNMWGEKVQNIARPSRSLLEIIRESWIEENGSTPSGNADEASQALWESSFNTLPLFTEEDKAYVATMKDKGKEDRGIKAVARRFEEEIIEV 282 K Q+ +G KVQ I RPSR++LE IR++WI ENGS P GN +A Q W + N PL TE +KA D +++ +K VARR E +++++ Sbjct: 65 KPQDCYGVKVQTIERPSRTILEEIRQAWIAENGSVPIGNEAQAEQ--WNQAINVKPLMTEAEKA-TYEKSDGLDQEKLLKNVARRIEADLLQI 154
BLAST of mRNA_L-elsbetiae_contig15710.3993.1 vs. uniprot
Match: A0A8K1MS18_9CYAN (GIY-YIG nuclease family protein n=2 Tax=Oscillatoriales TaxID=1150 RepID=A0A8K1MS18_9CYAN) HSP 1 Score: 72.0 bits (175), Expect = 1.320e-13 Identity = 37/92 (40.22%), Postives = 59/92 (64.13%), Query Frame = 1 Query: 4 KNQNMWGEKVQNIARPSRSLLEIIRESWIEENGSTPSGNADEASQALWESSFNTLPLFTEEDKAYVATMKDKGKEDRGIKAVARRFEEEIIE 279 K ++ + KV+ IARPSR +LE IR+ W++ENG P GN + ++A W + PL T+E++ +A D+GK+ + IK VARR + ++E Sbjct: 70 KPEDCYSFKVETIARPSRQVLEDIRQHWLQENGMVPPGNGE--AEAEWTQPIDVKPLMTDEERNGLAEALDEGKKTKCIKQVARRIQGNLLE 159
BLAST of mRNA_L-elsbetiae_contig15710.3993.1 vs. uniprot
Match: A0A6P0Y1X2_9CYAN (GIY-YIG nuclease family protein n=1 Tax=Okeania sp. SIO2D1 TaxID=2607792 RepID=A0A6P0Y1X2_9CYAN) HSP 1 Score: 70.5 bits (171), Expect = 4.620e-13 Identity = 40/90 (44.44%), Postives = 59/90 (65.56%), Query Frame = 1 Query: 10 QNMWGEKVQNIARPSRSLLEIIRESWIEENGSTPSGNADEASQALWESSFNTLPLFTEEDKAYVATMKDKGKEDRGIKAVARRFEEEIIE 279 Q+ + K++ IARPSR++LE I++SWIEENG P GN E ++ W + PL T EDKA +++ + + +K +ARRFEEEI+E Sbjct: 67 QSCYWVKIEMIARPSRTILEEIKKSWIEENGFLPIGNDTEENK--WNKPLDVKPLMTAEDKAEYNKLEEIA-QIKLLKKIARRFEEEILE 153
BLAST of mRNA_L-elsbetiae_contig15710.3993.1 vs. uniprot
Match: A0A6P1ZWW8_9CYAN (GIY-YIG nuclease family protein n=1 Tax=Nodularia sp. (in: Bacteria) TaxID=2047085 RepID=A0A6P1ZWW8_9CYAN) HSP 1 Score: 69.3 bits (168), Expect = 1.340e-12 Identity = 42/92 (45.65%), Postives = 57/92 (61.96%), Query Frame = 1 Query: 10 QNMWGEKVQNIARPSRSLLEIIRESWIEENGSTPSGNADEASQALWESSFNTLPLFTEEDKA-YVATMKDKGKEDRGIKAVARRFEEEIIEV 282 Q + KVQ I RPSR++LE I +W+ ENGS PSGNA++ + +W N PL T+E++A Y D+ E + IK VARR E EI+ V Sbjct: 67 QKCYWVKVQTIERPSRTVLENIENAWMAENGSVPSGNAND--KEIWTQPINIKPLMTDEEQANYHHPANDELAEIKIIKNVARRVEAEILVV 156
BLAST of mRNA_L-elsbetiae_contig15710.3993.1 vs. uniprot
Match: A0A0G4GGJ4_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GGJ4_VITBC) HSP 1 Score: 70.1 bits (170), Expect = 1.770e-12 Identity = 39/85 (45.88%), Postives = 53/85 (62.35%), Query Frame = 1 Query: 28 KVQNIARPSRSLLEIIRESWIEENGSTPSGNADEASQALWESSFNTLPLFTEEDKAYVATMKDKGKEDRGIKAVARRFEEEIIEV 282 KV +I RP+RSLLE+I++SW++E+G+ P GN Q LWE + PL T+ED+ A + KGK VARR+E E EV Sbjct: 112 KVHHILRPNRSLLELIKQSWLDESGNIPPGNRP-PDQELWEHPLDIKPLMTDEDRERYAEKEQKGKGFNVYLEVARRYEAEKKEV 195
BLAST of mRNA_L-elsbetiae_contig15710.3993.1 vs. uniprot
Match: A0A4D9CSA1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSA1_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 2.890e-12 Identity = 37/89 (41.57%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 19 WGEKVQNIARPSRSLLEIIRESWIEENGSTPSGNADEASQALWESSFNTLPLFTEEDKAYVATMKDKGK-EDRGIKAVARRFEEEIIEV 282 +G +V +I++P+R LLEI R++W+++ G P GN + +Q LWES+ + PL E D A + T + K + E+ +K V RRFEE I V Sbjct: 156 YGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISV 244
BLAST of mRNA_L-elsbetiae_contig15710.3993.1 vs. uniprot
Match: K8YTT3_NANGC (Protein atypical group n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YTT3_NANGC) HSP 1 Score: 70.1 bits (170), Expect = 5.180e-12 Identity = 37/89 (41.57%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 19 WGEKVQNIARPSRSLLEIIRESWIEENGSTPSGNADEASQALWESSFNTLPLFTEEDKAYVATMKDKGK-EDRGIKAVARRFEEEIIEV 282 +G +V +I++P+R LLEI R++W+++ G P GN + +Q LWES+ + PL E D A + T + K + E+ +K V RRFEE I V Sbjct: 156 YGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISV 244
BLAST of mRNA_L-elsbetiae_contig15710.3993.1 vs. uniprot
Match: A0A0P8C0Y8_9CYAN (GIY-YIG catalytic domain n=3 Tax=Phormidium TaxID=1198 RepID=A0A0P8C0Y8_9CYAN) HSP 1 Score: 67.0 bits (162), Expect = 1.030e-11 Identity = 34/84 (40.48%), Postives = 53/84 (63.10%), Query Frame = 1 Query: 28 KVQNIARPSRSLLEIIRESWIEENGSTPSGNADEASQALWESSFNTLPLFTEEDKAYVATMKDKGKEDRGIKAVARRFEEEIIE 279 +V+ I RPSR+LLE IR+ W+ ENG+ P GN + +QA W + PL T+ +++ D+GK+ + IK VARR + ++E Sbjct: 74 RVETIDRPSRTLLEDIRQKWLTENGTIPPGNGE--AQAQWTQPIDVKPLMTDAERSAFEEALDEGKKTKCIKQVARRVQATVLE 155
BLAST of mRNA_L-elsbetiae_contig15710.3993.1 vs. uniprot
Match: A0A8J7F8J5_9CYAN (GIY-YIG nuclease family protein n=1 Tax=Oculatella sp. LEGE 06141 TaxID=1828648 RepID=A0A8J7F8J5_9CYAN) HSP 1 Score: 66.6 bits (161), Expect = 1.400e-11 Identity = 39/83 (46.99%), Postives = 51/83 (61.45%), Query Frame = 1 Query: 28 KVQNIARPSRSLLEIIRESWIEENGSTPSGNADEASQALWESSFNTLPLFTEEDKAYVATMKDKGKEDRGIKAVARRFEEEII 276 KVQ IARPSR+ LE +R+SWI ENG TP GNA A + LW + + T ++A A D GK + +K VARR E E++ Sbjct: 73 KVQTIARPSRTQLEAMRDSWIAENGCTPVGNA--ADEPLWNQAIDAKTKMTAAEQAEYAASDDLGK-IKTLKRVARRVEAEVL 152 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15710.3993.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15710.3993.1 >prot_L-elsbetiae_contig15710.3993.1 ID=prot_L-elsbetiae_contig15710.3993.1|Name=mRNA_L-elsbetiae_contig15710.3993.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=89bp MWGEKVQNIARPSRSLLEIIRESWIEENGSTPSGNADEASQALWESSFNTback to top mRNA from alignment at L-elsbetiae_contig15710:2529..3457+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15710.3993.1 ID=mRNA_L-elsbetiae_contig15710.3993.1|Name=mRNA_L-elsbetiae_contig15710.3993.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=929bp|location=Sequence derived from alignment at L-elsbetiae_contig15710:2529..3457+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15710:2529..3457+ >mRNA_L-elsbetiae_contig15710.3993.1 ID=mRNA_L-elsbetiae_contig15710.3993.1|Name=mRNA_L-elsbetiae_contig15710.3993.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=534bp|location=Sequence derived from alignment at L-elsbetiae_contig15710:2529..3457+ (Laminarionema elsbetiae ELsaHSoW15)back to top |