mRNA_L-elsbetiae_contig1571.3989.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1571.3989.1 vs. uniprot
Match: A0A6H5KEH5_9PHAE (Dynactin subunit 6 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH5_9PHAE) HSP 1 Score: 333 bits (855), Expect = 8.600e-108 Identity = 166/197 (84.26%), Postives = 178/197 (90.36%), Query Frame = 1 Query: 331 VRIGEGAVVCDGTAAKPPYHPHDGATGATLAGDITIGPETVVFPGAEIRCCEGAGPVVIGRGCVLEEGACLVNAGPGEMRVGDGNLFEVGCTVHAQQVGDYNTFQPKCEVGQEVAVASGCCIGPTVVLAVALKLEDNSSVFRLGGAVDEYSIQRRPRNTETNRARVKTYRSALASQGKKYYLGKYNKLLPPSAAAPT 921 VRI EGA+VCDGTAAKPPYH GA GA L GDITIG +TVVFPGA+IRC EGAGPVVIGRGCVLEEGACLVN GPGEMRVGDGNLFEVGC V AQ+VGDYNTFQPKCEVGQ V VASGC I PTVVL VALKLED+ SVFRLGGAVDEYSIQRRPRNTETNRARV +YR+ALASQGKKYYLGK+N+LLPPS+A+P+ Sbjct: 8 VRIAEGAMVCDGTAAKPPYH-GSGAAGAMLTGDITIGRDTVVFPGAQIRCSEGAGPVVIGRGCVLEEGACLVNVGPGEMRVGDGNLFEVGCAVRAQKVGDYNTFQPKCEVGQGVTVASGCSIAPTVVLDVALKLEDDCSVFRLGGAVDEYSIQRRPRNTETNRARVNSYRTALASQGKKYYLGKFNELLPPSSASPS 203
BLAST of mRNA_L-elsbetiae_contig1571.3989.1 vs. uniprot
Match: D7FZR2_ECTSI (Dynactin subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR2_ECTSI) HSP 1 Score: 206 bits (523), Expect = 1.070e-59 Identity = 98/115 (85.22%), Postives = 103/115 (89.57%), Query Frame = 1 Query: 352 VVCDGTAAKPPYHPHDGATGATLAGDITIGPETVVFPGAEIRCCEGAGPVVIGRGCVLEEGACLVNAGPGEMRVGDGNLFEVGCTVHAQQVGDYNTFQPKCEVGQEVAVASGCCI 696 +VCDG AAKPPYH GA GATL GDITIGP+TVVFPGA+IRCCEGAGPVVIGRGCVLEEGACLVN GPGEMRVGDGNLFEVGC V AQ+VGD+NTFQPKCEVGQ V VASGC I Sbjct: 1 MVCDGAAAKPPYH-GSGAAGATLTGDITIGPDTVVFPGAQIRCCEGAGPVVIGRGCVLEEGACLVNVGPGEMRVGDGNLFEVGCAVRAQKVGDFNTFQPKCEVGQGVTVASGCSI 114
BLAST of mRNA_L-elsbetiae_contig1571.3989.1 vs. uniprot
Match: A0A8K0U9Y2_9AGAM (Trimeric LpxA-like protein (Fragment) n=1 Tax=Phlebopus sp. FC_14 TaxID=2615122 RepID=A0A8K0U9Y2_9AGAM) HSP 1 Score: 96.7 bits (239), Expect = 1.600e-19 Identity = 51/114 (44.74%), Postives = 69/114 (60.53%), Query Frame = 1 Query: 418 LAGDITIGPETVVFPGAEIRCCEGAGPVVIGRGCVLEEGACLVNAGPGEMRVGDGNLFEVGCTVHAQQVGDYNTFQPKCEVGQEVAVASGCCIGPTVVLAVALK--LEDNSSVF 753 L GDITIGP TV+ P A + AGP+V+G GC++EE A +VN MR+GD NLFE+GC V + VG++NT + V V V++ C IG +L LE+ +SVF Sbjct: 18 LKGDITIGPGTVIHPKATLFAL--AGPIVVGSGCIIEEAAVIVNRRKDVMRIGDNNLFEIGCRVESPSVGNFNTISTRARVHHTVRVSNYCVIGAACLLVPTEDETLEEYTSVF 129
BLAST of mRNA_L-elsbetiae_contig1571.3989.1 vs. uniprot
Match: A0A137Q155_9AGAR (Dynactin subunit 6 (Fragment) n=1 Tax=Leucoagaricus sp. SymC.cos TaxID=1714833 RepID=A0A137Q155_9AGAR) HSP 1 Score: 96.3 bits (238), Expect = 2.240e-19 Identity = 45/96 (46.88%), Postives = 60/96 (62.50%), Query Frame = 1 Query: 418 LAGDITIGPETVVFPGAEIRCCEGAGPVVIGRGCVLEEGACLVNAGPGEMRVGDGNLFEVGCTVHAQQVGDYNTFQPKCEVGQEVAVASGCCIGPT 705 L GDITIGP T++ P A I AGP++IG GC++EEGA +VN MR+GD NLFE+GC + +G +NT + V V++ S C IG T Sbjct: 18 LKGDITIGPGTIIHPKATIFAI--AGPIIIGSGCIIEEGAIIVNRKKETMRIGDDNLFEIGCRIECPSIGSFNTVSTRARVHHTVSIGSYCVIGAT 111
BLAST of mRNA_L-elsbetiae_contig1571.3989.1 vs. uniprot
Match: A0A0D0A867_9AGAM (Dynactin subunit 6 n=8 Tax=Suillineae TaxID=227332 RepID=A0A0D0A867_9AGAM) HSP 1 Score: 96.3 bits (238), Expect = 2.420e-19 Identity = 53/114 (46.49%), Postives = 68/114 (59.65%), Query Frame = 1 Query: 418 LAGDITIGPETVVFPGAEIRCCEGAGPVVIGRGCVLEEGACLVNAGPGEMRVGDGNLFEVGCTVHAQQVGDYNTFQPKCEVGQEVAVASGCCIGPT--VVLAVALKLEDNSSVF 753 L GDITIGP TVV P A I AGP++IG GC++EE A +VN MRVGD NLFE+GC V VG++NT + V V +++ C IG VV L+D +S+F Sbjct: 22 LKGDITIGPGTVVHPKATIFAI--AGPIIIGSGCIIEEAAIIVNRRKEVMRVGDNNLFEIGCRVECPSVGNFNTISTRARVHHTVRISNYCVIGAACLVVPTDDETLDDYTSIF 133
BLAST of mRNA_L-elsbetiae_contig1571.3989.1 vs. uniprot
Match: UPI001B862DF6 (trimeric LpxA-like protein n=1 Tax=Suillus discolor TaxID=1912936 RepID=UPI001B862DF6) HSP 1 Score: 95.1 bits (235), Expect = 5.380e-19 Identity = 53/112 (47.32%), Postives = 67/112 (59.82%), Query Frame = 1 Query: 424 GDITIGPETVVFPGAEIRCCEGAGPVVIGRGCVLEEGACLVNAGPGEMRVGDGNLFEVGCTVHAQQVGDYNTFQPKCEVGQEVAVASGCCIGPT--VVLAVALKLEDNSSVF 753 GDITIGP TVV P A I AGP+VIG GC++EE A +VN MRVGD NLFE+GC V VG++NT + V V +++ C IG VV L+D +S+F Sbjct: 19 GDITIGPGTVVHPKATIFAI--AGPIVIGSGCIIEEAAIIVNRRKEVMRVGDNNLFEIGCRVECPSVGNFNTISTRARVHHTVRISNYCVIGAACLVVPTDDETLDDYTSIF 128
BLAST of mRNA_L-elsbetiae_contig1571.3989.1 vs. uniprot
Match: B0DPX7_LACBS (Dynactin subunit 6 n=5 Tax=Agaricales TaxID=5338 RepID=B0DPX7_LACBS) HSP 1 Score: 93.6 bits (231), Expect = 2.100e-18 Identity = 48/99 (48.48%), Postives = 61/99 (61.62%), Query Frame = 1 Query: 418 LAGDITIGPETVVFPGAEIRCCEGAGPVVIGRGCVLEEGACLVNAGPGEMRVGDGNLFEVGCTVHAQQVGDYNTFQPKCEVGQEVAVASGCCIGPTVVL 714 L GDITIG T+V P A I AGP+VIG GC++EEGA +VN MR+GD NLFE+GC V VG++NT + V V ++S C IG +L Sbjct: 22 LKGDITIGSGTIVHPKATIFAI--AGPIVIGMGCIIEEGAIIVNRRKEVMRIGDDNLFEIGCRVECPSVGNFNTISTRARVHHTVRISSFCVIGAGCLL 118
BLAST of mRNA_L-elsbetiae_contig1571.3989.1 vs. uniprot
Match: A0A067T137_GALM3 (Dynactin subunit 6 n=4 Tax=Agaricales TaxID=5338 RepID=A0A067T137_GALM3) HSP 1 Score: 93.2 bits (230), Expect = 2.860e-18 Identity = 51/114 (44.74%), Postives = 68/114 (59.65%), Query Frame = 1 Query: 418 LAGDITIGPETVVFPGAEIRCCEGAGPVVIGRGCVLEEGACLVNAGPGEMRVGDGNLFEVGCTVHAQQVGDYNTFQPKCEVGQEVAVASGCCIGPTVVLAVALK--LEDNSSVF 753 L GDITIG T+V P A I AGP+VIG GC++EE A +VN MR+GD NLFE+GC + + VG++NT + V V ++S C IG V+L LED + V+ Sbjct: 22 LKGDITIGSGTIVHPKATIFAI--AGPIVIGMGCIIEESAIIVNRRKEVMRIGDDNLFEIGCRIESPSVGNFNTVSTRARVHHTVRISSYCVIGAGVLLVPTEDQVLEDYTVVY 133
BLAST of mRNA_L-elsbetiae_contig1571.3989.1 vs. uniprot
Match: A0A5M3MST4_CONPW (Dynactin subunit 6 n=1 Tax=Coniophora puteana (strain RWD-64-598) TaxID=741705 RepID=A0A5M3MST4_CONPW) HSP 1 Score: 93.2 bits (230), Expect = 2.860e-18 Identity = 54/121 (44.63%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 418 LAGDITIGPETVVFPGAEIRCCEGAGPVVIGRGCVLEEGACLVNAGPGEMRVGDGNLFEVGCTVHAQQVGDYNTFQPKCEVGQEVAVASGCCIGPT--VVLAVALKLEDNSSVFRLGGAVD 774 L GDITIGP T+V P A I AGP+VIG GC++EE A +VN MR+GD NLFE+GC V VG+ NTF + + V V++ C IG VV L++ +S++ G A D Sbjct: 22 LKGDITIGPGTIVHPKATIFAI--AGPIVIGAGCIVEEAAIIVNRRKEVMRIGDNNLFEIGCRVECPSVGNNNTFSTRSRIHHTVRVSNFCFIGAACLVVPTEDETLDEYTSIY--GPAAD 138
BLAST of mRNA_L-elsbetiae_contig1571.3989.1 vs. uniprot
Match: A0A4Y7Q6W7_9AGAM (Dynactin subunit 6 n=1 Tax=Rickenella mellea TaxID=50990 RepID=A0A4Y7Q6W7_9AGAM) HSP 1 Score: 93.2 bits (230), Expect = 3.770e-18 Identity = 49/94 (52.13%), Postives = 59/94 (62.77%), Query Frame = 1 Query: 418 LAGDITIGPETVVFPGAEIRCCEGAGPVVIGRGCVLEEGACLVNAGPGEMRVGDGNLFEVGCTVHAQQVGDYNTFQPKCEVGQEVAVASGCCIG 699 L GDITIG TVV P A I AGP+VIG+ C++EEGA LVN MRVGD NLFE+GC V + +G +NT K V V ++S C IG Sbjct: 22 LKGDITIGAGTVVHPKAAIYAI--AGPIVIGQNCIIEEGAILVNRRKEVMRVGDDNLFEIGCRVESPTIGHFNTISAKSRVHHTVRISSFCVIG 113 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1571.3989.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1571.3989.1 >prot_L-elsbetiae_contig1571.3989.1 ID=prot_L-elsbetiae_contig1571.3989.1|Name=mRNA_L-elsbetiae_contig1571.3989.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=207bp MPASVRIGEGAVVCDGTAAKPPYHPHDGATGATLAGDITIGPETVVFPGAback to top mRNA from alignment at L-elsbetiae_contig1571:6746..10107+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1571.3989.1 ID=mRNA_L-elsbetiae_contig1571.3989.1|Name=mRNA_L-elsbetiae_contig1571.3989.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3362bp|location=Sequence derived from alignment at L-elsbetiae_contig1571:6746..10107+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1571:6746..10107+ >mRNA_L-elsbetiae_contig1571.3989.1 ID=mRNA_L-elsbetiae_contig1571.3989.1|Name=mRNA_L-elsbetiae_contig1571.3989.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1242bp|location=Sequence derived from alignment at L-elsbetiae_contig1571:6746..10107+ (Laminarionema elsbetiae ELsaHSoW15)back to top |