mRNA_L-elsbetiae_contig1571.3988.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1571.3988.1 vs. uniprot
Match: D7FZR1_ECTSI (PAP2_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR1_ECTSI) HSP 1 Score: 154 bits (390), Expect = 3.150e-43 Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 1 Query: 16 GDMVFSGHTTCLVMVAMTFRRYCRASELQTKVLLRGFHLSEGVLSAVRRLVYAYVALGALVIIGSKLHYTLDVLLAVLVSFW 261 GDMVFSGHTTCLVMVAMTFRRYCRASELQTKVLLRGFHLSEGVLSAVRR VYAYVALGALVIIGSKLHYTLDVLLAVLV+FW Sbjct: 352 GDMVFSGHTTCLVMVAMTFRRYCRASELQTKVLLRGFHLSEGVLSAVRRAVYAYVALGALVIIGSKLHYTLDVLLAVLVTFW 433
BLAST of mRNA_L-elsbetiae_contig1571.3988.1 vs. uniprot
Match: A0A6H5KC29_9PHAE (PAP2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC29_9PHAE) HSP 1 Score: 147 bits (372), Expect = 1.760e-40 Identity = 77/81 (95.06%), Postives = 79/81 (97.53%), Query Frame = 1 Query: 16 GDMVFSGHTTCLVMVAMTFRRYCRASELQTKVLLRGFHLSEGVLSAVRRLVYAYVALGALVIIGSKLHYTLDVLLAVLVSF 258 GDMVFSGHTTCL+MVAMTFRRYCRASELQTKVLLRGFHLSEGVLSAVRR VYAYV LGALVIIGSKLHYTLDVLLAVLV+F Sbjct: 358 GDMVFSGHTTCLLMVAMTFRRYCRASELQTKVLLRGFHLSEGVLSAVRRAVYAYVTLGALVIIGSKLHYTLDVLLAVLVTF 438
BLAST of mRNA_L-elsbetiae_contig1571.3988.1 vs. uniprot
Match: A0A835YVL2_9STRA (PAP2_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVL2_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 1.000e-22 Identity = 53/82 (64.63%), Postives = 65/82 (79.27%), Query Frame = 1 Query: 16 GDMVFSGHTTCLVMVAMTFRRYCRASELQTKVLLRGFHLSEGVLSAVRRLVYAYVALGALVIIGSKLHYTLDVLLAVLVSFW 261 GDM+FSGHTTCL+M A+ FR+Y RA LQTKVL RG +SE L+ +R VYAYVA G LVIIGSKLHY++DVL A+ +SF+ Sbjct: 328 GDMMFSGHTTCLMMFALVFRQYLRAKHLQTKVLFRGA-VSERFLAPIRHAVYAYVACGCLVIIGSKLHYSIDVLYAIGLSFF 408
BLAST of mRNA_L-elsbetiae_contig1571.3988.1 vs. uniprot
Match: A0A5D6Y6V8_9STRA (PAP2_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6V8_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 2.570e-11 Identity = 41/80 (51.25%), Postives = 52/80 (65.00%), Query Frame = 1 Query: 16 GDMVFSGHTTCLVMVAMTFRRYCRASELQTKVLLRGFHLSEGVLSAVRRLVYAYVALGALVIIGSKLHYTLDVLLAVLVS 255 GDMVFSGHT ++ AMT + YC +EL T R VL VR VYA VALG +I+G++LHYTLDVL+A+ V+ Sbjct: 269 GDMVFSGHTVFFMLCAMTVKWYCIKAELNTPFTRR----YPFVLWLVRYTVYAGVALGIFMIVGTRLHYTLDVLVAIYVT 344
BLAST of mRNA_L-elsbetiae_contig1571.3988.1 vs. uniprot
Match: A0A5D6Y591_9STRA (PAP2_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y591_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 3.480e-11 Identity = 40/80 (50.00%), Postives = 50/80 (62.50%), Query Frame = 1 Query: 16 GDMVFSGHTTCLVMVAMTFRRYCRASELQTKVLLRGFHLSEGVLSAVRRLVYAYVALGALVIIGSKLHYTLDVLLAVLVS 255 GDMVFSGHT ++ AMT + YC SEL T R + VL VR VY VA G I+G++LHYTLDVL+AV ++ Sbjct: 261 GDMVFSGHTVFFMLCAMTVKTYCVKSELNTPFTRRFPY----VLWMVRYYVYTGVAFGVFAIVGTRLHYTLDVLIAVYIT 336
BLAST of mRNA_L-elsbetiae_contig1571.3988.1 vs. uniprot
Match: A0A662XYW3_9STRA (PAP2_C domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XYW3_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.130e-9 Identity = 38/80 (47.50%), Postives = 48/80 (60.00%), Query Frame = 1 Query: 16 GDMVFSGHTTCLVMVAMTFRRYCRASELQTKVLLRGFHLSEGVLSAVRRLVYAYVALGALVIIGSKLHYTLDVLLAVLVS 255 GDM+FSGH L++ AM R YC SEL T R VL VR VYA A G I+G++LHYTLDVL+A+ ++ Sbjct: 320 GDMIFSGHAVFLMLCAMFARTYCVHSELNTPFTRR----YSCVLWMVRYYVYAGSAFGVFAIVGTRLHYTLDVLIAIYIT 395
BLAST of mRNA_L-elsbetiae_contig1571.3988.1 vs. uniprot
Match: A0A3F2RRE6_9STRA (PAP2_C domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RRE6_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 2.050e-9 Identity = 36/80 (45.00%), Postives = 48/80 (60.00%), Query Frame = 1 Query: 16 GDMVFSGHTTCLVMVAMTFRRYCRASELQTKVLLRGFHLSEGVLSAVRRLVYAYVALGALVIIGSKLHYTLDVLLAVLVS 255 GDM+FSGH L++ M R YC SEL T R VL +R +YA A GA I+G++LHYTLDVL+A+ ++ Sbjct: 262 GDMIFSGHAVFLMLCVMFARTYCVRSELNTPFTRR----FPCVLWMIRYYIYAGSAFGAFAIVGTRLHYTLDVLIAIYIT 337
BLAST of mRNA_L-elsbetiae_contig1571.3988.1 vs. uniprot
Match: W4G5H0_9STRA (PAP2_C domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G5H0_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 2.070e-9 Identity = 36/85 (42.35%), Postives = 49/85 (57.65%), Query Frame = 1 Query: 1 HNGNSGDMVFSGHTTCLVMVAMTFRRYCRASELQTKVLLRGFHLSEGVLSAVRRLVYAYVALGALVIIGSKLHYTLDVLLAVLVS 255 H+ GDM+FSGHT LV+ A+T YC +EL T VL+ V+ LGA I+G++LHYTLDVL+A+ V+ Sbjct: 271 HHITCGDMIFSGHTVFLVLCALTVTTYCAKAELNTPFT----RAHPWVLTLVKTATVIGSTLGAFAIVGTRLHYTLDVLIAIYVT 351
BLAST of mRNA_L-elsbetiae_contig1571.3988.1 vs. uniprot
Match: K3XC87_GLOUD (PAP2_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XC87_GLOUD) HSP 1 Score: 62.4 bits (150), Expect = 2.080e-9 Identity = 37/80 (46.25%), Postives = 47/80 (58.75%), Query Frame = 1 Query: 16 GDMVFSGHTTCLVMVAMTFRRYCRASELQTKVLLRGFHLSEGVLSAVRRLVYAYVALGALVIIGSKLHYTLDVLLAVLVS 255 GDMVFSGHT ++ M + YC SEL T R + VL VR VY A G I+G++LHYTLDVL+AV ++ Sbjct: 278 GDMVFSGHTVFFMLCCMIVKTYCVKSELNTPFTRRYSY----VLWMVRYYVYTGAAFGIFAIVGTRLHYTLDVLIAVYIT 353
BLAST of mRNA_L-elsbetiae_contig1571.3988.1 vs. uniprot
Match: A0A1W0A1T6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1T6_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 5.580e-9 Identity = 37/85 (43.53%), Postives = 47/85 (55.29%), Query Frame = 1 Query: 1 HNGNSGDMVFSGHTTCLVMVAMTFRRYCRASELQTKVLLRGFHLSEGVLSAVRRLVYAYVALGALVIIGSKLHYTLDVLLAVLVS 255 H+ GDMVFSGHT LV+ AM YC EL T + L +R VYA G I+G++LHYTLDVL+A+ V+ Sbjct: 591 HHITCGDMVFSGHTVFLVLCAMIVTTYCTMEELNTPFTRK----YSWTLPLLRYSVYAGSFFGVFAIVGTRLHYTLDVLIAIYVT 671 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1571.3988.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1571.3988.1 >prot_L-elsbetiae_contig1571.3988.1 ID=prot_L-elsbetiae_contig1571.3988.1|Name=mRNA_L-elsbetiae_contig1571.3988.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=81bp MVFSGHTTCLVMVAMTFRRYCRASELQTKVLLRGFHLSEGVLSAVRRLVYback to top mRNA from alignment at L-elsbetiae_contig1571:605..868- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1571.3988.1 ID=mRNA_L-elsbetiae_contig1571.3988.1|Name=mRNA_L-elsbetiae_contig1571.3988.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=264bp|location=Sequence derived from alignment at L-elsbetiae_contig1571:605..868- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1571:605..868- >mRNA_L-elsbetiae_contig1571.3988.1 ID=mRNA_L-elsbetiae_contig1571.3988.1|Name=mRNA_L-elsbetiae_contig1571.3988.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=486bp|location=Sequence derived from alignment at L-elsbetiae_contig1571:605..868- (Laminarionema elsbetiae ELsaHSoW15)back to top |