mRNA_L-elsbetiae_contig1564.3952.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1564.3952.1
Unique NamemRNA_L-elsbetiae_contig1564.3952.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1564.3952.1 vs. uniprot
Match: D7FVV6_ECTSI (Prohibitin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVV6_ECTSI)

HSP 1 Score: 502 bits (1292), Expect = 9.530e-174
Identity = 269/275 (97.82%), Postives = 273/275 (99.27%), Query Frame = 2
Query:  152 MAEKLLQNVSRLGGVVALAAATEMCLFNVDGGQRAVIFDRFQGVKEAVVGEGTHFMIPVVQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKRESVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAMLISSALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTGGGNTNMLLGLNTA 976
            MAEKLLQNVSRLGGVVA+AAATEMCLFNVDGGQRAVIFDRFQGVKEAVVGEGTHFMIP+VQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKRESVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAA LIS+ALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTGGG+ NMLLGLNTA
Sbjct:    1 MAEKLLQNVSRLGGVVAIAAATEMCLFNVDGGQRAVIFDRFQGVKEAVVGEGTHFMIPIVQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKRESVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAELISAALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTGGGS-NMLLGLNTA 274          
BLAST of mRNA_L-elsbetiae_contig1564.3952.1 vs. uniprot
Match: A0A835Z1F2_9STRA (Prohibitin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1F2_9STRA)

HSP 1 Score: 374 bits (959), Expect = 2.370e-123
Identity = 199/273 (72.89%), Postives = 233/273 (85.35%), Query Frame = 2
Query:  152 MAEKLLQNVSRLGGVVALAAATEMCLFNVDGGQRAVIFDRFQGVKEAVVGEGTHFMIPVVQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKRESVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAMLISSALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTGGGNTNMLLGLN 970
            MA++LL   +R+G +VA AAA ++CL+ VDGG+RAVIFDR  GVK+ VVGEGTHF+IP +Q PII+DVR R R INS+TGTKDLQ ANISLRVLSRP E++L  I+++LG D+DDRVLPSLGNEVLKAVVAKYNAEELLSKRE+VS ++R+E+  RAKQF+LI+DDVSITHLTFG EFTKAIENKQVAQQEAERQVY+V  S+QER AA+IRAEGEAEAA LIS+ALK SG GLIEVRRID AKEIA TLA  R +TYLP G G  NMLL ++
Sbjct:    1 MADRLLSAATRVGVLVAGAAAVDLCLYTVDGGERAVIFDRLAGVKDDVVGEGTHFLIPGLQTPIIMDVRDRARVINSVTGTKDLQTANISLRVLSRPDEAKLALIFKQLGQDYDDRVLPSLGNEVLKAVVAKYNAEELLSKRETVSHQVREEIMARAKQFNLILDDVSITHLTFGREFTKAIENKQVAQQEAERQVYLVQKSEQERQAAVIRAEGEAEAADLISNALKSSGSGLIEVRRIDAAKEIAETLANGRGVTYLPAGQGGANMLLSVD 273          
BLAST of mRNA_L-elsbetiae_contig1564.3952.1 vs. uniprot
Match: A0A7S0T017_9STRA (Prohibitin n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0T017_9STRA)

HSP 1 Score: 343 bits (879), Expect = 2.610e-111
Identity = 181/273 (66.30%), Postives = 216/273 (79.12%), Query Frame = 2
Query:  152 MAEKLLQNVSRLGGVVALAAATEMCLFNVDGGQRAVIFDRFQGVKEAVVGEGTHFMIPVVQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKRESVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAMLISSALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTGGGNTNMLLGLN 970
            MAE+L      LG  V +    + C+++VD G RAVIFD+ +G+++ VVGEGTHF IP++Q PII+D+R+RPR INS TGTKDLQM NISLRVLSRP ES+LP IY+ LG DFDDR+LPSLGNEVLKAVVA+YNAEELLSKR  VS +IR EL  RA +F+LI+DDVSITHLTFG EF KAIE+KQVAQQEAE Q Y+VA +DQER AAII AEGEAEAA +IS A+  +G GL+EVRRID AKE+A TLA  RN+ YLP G   +N LL L+
Sbjct:    1 MAERLTSLTKYLGSAVFIFGIIDQCIYDVDAGTRAVIFDKVRGIQDKVVGEGTHFKIPIIQDPIIMDIRSRPRIINSSTGTKDLQMVNISLRVLSRPNESKLPLIYKTLGIDFDDRILPSLGNEVLKAVVAQYNAEELLSKRAHVSLQIRTELLERASKFNLILDDVSITHLTFGTEFAKAIEHKQVAQQEAETQAYLVAKADQERKAAIILAEGEAEAANMISKAMSAAGNGLVEVRRIDAAKEVAGTLAKGRNVIYLPNGKDGSNFLLSLD 273          
BLAST of mRNA_L-elsbetiae_contig1564.3952.1 vs. uniprot
Match: A0A7S2XWM3_9STRA (Prohibitin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWM3_9STRA)

HSP 1 Score: 340 bits (872), Expect = 2.950e-110
Identity = 182/275 (66.18%), Postives = 220/275 (80.00%), Query Frame = 2
Query:  152 MAEKLLQNVSRLG-GVVALAAATEMCLFNVDGGQRAVIFDRFQGVKEAVVGEGTHFMIPVVQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKRESVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAMLISSALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTG-GGNTNMLLGLN 970
            MAE++L  ++++G    A     + CL  VDGGQRAVIFD+F+G+     GEG HF+IP++Q+P I+D+RARPR INS+TGTKDLQM NISLRVLSRP E ++  I++ LGTDFD+RVLPSLGNEVLKA+VA+YNAE+LL KR+ VS +IR+ L  RA  F+LI+DDVSITHLTFG E+ KAIE+KQVAQQEAERQ YVVA +DQER AAIIRAEGEAEAA LIS AL  SG GLIEVRRID A+E+A  LA +R +TYLP G GG  N+LLGLN
Sbjct:    1 MAERVLGLLTKIGLAATAGGVVVKFCLVTVDGGQRAVIFDKFKGILPDSCGEGMHFLIPIIQEPHILDIRARPRVINSVTGTKDLQMVNISLRVLSRPEEDKISHIFRTLGTDFDERVLPSLGNEVLKAIVAQYNAEDLLRKRDEVSEKIREALRKRAGAFNLILDDVSITHLTFGREYAKAIESKQVAQQEAERQQYVVAKADQERKAAIIRAEGEAEAATLISKALAGSGSGLIEVRRIDAAREVAENLAAARGVTYLPGGQGGGQNILLGLN 275          
BLAST of mRNA_L-elsbetiae_contig1564.3952.1 vs. uniprot
Match: F0Y523_AURAN (Prohibitin n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y523_AURAN)

HSP 1 Score: 338 bits (868), Expect = 1.300e-109
Identity = 182/275 (66.18%), Postives = 219/275 (79.64%), Query Frame = 2
Query:  158 EKLLQNVSRLG-GVVALAAATEMCLFNVDGGQRAVIFDRFQGVKEAVVGEGTHFMIPVVQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKRESVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAMLISSALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTGG--GNTNMLLGLNT 973
            EK+L  V+RLG GV  ++     CL+NV+GG RAV+FD  +GV    + EGT F IPV+Q PII+D+R+RPR I S+TGTKDLQM NI LRVLSRP E  LP+IY  LGT+FDDRVLPSLGNEVLK+VVA+YNA++LLS RE +S +IR  LT RA+ F+LI+DDVSITHL FG EFT AIE KQVAQQEAERQ YVVA ++QE+ AAIIRAEGEAEAA  IS AL++ G GLIEVRRID A+E+A TL+ +R +TYLP+GG  G +NMLLGLNT
Sbjct:    2 EKVLTGVARLGMGVAGVSFIGSNCLYNVEGGHRAVMFDNIRGVLPKPISEGTGFKIPVLQTPIIMDIRSRPREIKSVTGTKDLQMVNIYLRVLSRPREEALPKIYMTLGTNFDDRVLPSLGNEVLKSVVAQYNADQLLSMREQISQQIRSTLTKRAEAFNLILDDVSITHLVFGKEFTSAIEQKQVAQQEAERQTYVVAKAEQEKKAAIIRAEGEAEAAATISKALEQCGSGLIEVRRIDAAREVAETLSRARGVTYLPSGGDKGGSNMLLGLNT 276          
BLAST of mRNA_L-elsbetiae_contig1564.3952.1 vs. uniprot
Match: A0A7S3M2D1_9STRA (Prohibitin n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2D1_9STRA)

HSP 1 Score: 334 bits (856), Expect = 7.730e-108
Identity = 176/257 (68.48%), Postives = 210/257 (81.71%), Query Frame = 2
Query:  197 VALAAATEMCLFNVDGGQRAVIFDRFQGVKEAVVGEGTHFMIPVVQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKRESVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAMLISSALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTGGGNTNMLLGL 967
            V    A E   ++VD G RAVIFD+ QG+++ V GEGTHF IP +Q PII+D+R+RPR+I+S+TGTKDLQM NISLRVLSRP E +L  IYQ LGTDFDDRVLPSLGNEVLK+VVA+YNAEELLSKR  VS  IR+ L  RA +F+LI+DDVSITHLTFG EF +AIE+KQVAQQEAE Q YVVA +DQER AA+IRAEGEAEAA LIS A+ ++G GLIEVRRIDTAK++A  ++ SRNITYLP+  G +NMLL +
Sbjct:   16 VVTGIAIEFFTYDVDAGNRAVIFDKIQGIQQTVKGEGTHFKIPFIQVPIIMDIRSRPRSIHSVTGTKDLQMVNISLRVLSRPKEDQLATIYQTLGTDFDDRVLPSLGNEVLKSVVAQYNAEELLSKRALVSHGIREALVERAAKFNLILDDVSITHLTFGKEFARAIEHKQVAQQEAETQAYVVAKADQERKAAVIRAEGEAEAANLISEAMLKAGNGLIEVRRIDTAKDVAQIVSRSRNITYLPSSKGGSNMLLNV 272          
BLAST of mRNA_L-elsbetiae_contig1564.3952.1 vs. uniprot
Match: A0A1Z5JUT9_FISSO (Prohibitin n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JUT9_FISSO)

HSP 1 Score: 334 bits (856), Expect = 8.570e-108
Identity = 176/279 (63.08%), Postives = 221/279 (79.21%), Query Frame = 2
Query:  152 MAEKLLQNVSRLGGVVALAAAT-EMCLFNVDGGQRAVIFDRFQG-VKEAVVGEGTHFMIPVVQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKRESVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAMLISSALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTGGGNT---NMLLGLNT 973
            MAE  L  + RL GV+A+   T   C++NVDGG+RAV+FD  +G ++  V GEGTHFMIPVVQ+PI++DVR +PR I SITGTKDLQM NI LRVL RP+  ELP +Y+ELGTDFD+RVLPS+GNEVLK++VA+YNAEELLSKR  VS RI++ +T RA+ FHL +DDV+ITHLTFG EF KAIE KQVA QEAERQ +VV  ++QER+A + RAEGEAEAA +I+ A++++G  ++EVRRID AKEIA  LA SRNI YLP GGG +   N+LL ++T
Sbjct:    1 MAEAALNRLGRLSGVLAVGTFTVSQCIYNVDGGERAVLFDTLRGGIRSDVRGEGTHFMIPVVQRPIVMDVRTKPREIPSITGTKDLQMVNIKLRVLWRPIVEELPALYRELGTDFDERVLPSIGNEVLKSIVAQYNAEELLSKRAEVSNRIKEAMTKRARHFHLTLDDVAITHLTFGREFMKAIEMKQVASQEAERQQWVVKKAEQERIAVVTRAEGEAEAASIITKAMEKTGNAIVEVRRIDAAKEIAGKLAQSRNIVYLPGGGGESGGSNLLLSVDT 279          
BLAST of mRNA_L-elsbetiae_contig1564.3952.1 vs. uniprot
Match: A0A7S4EFZ4_9STRA (Prohibitin n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EFZ4_9STRA)

HSP 1 Score: 334 bits (856), Expect = 9.500e-108
Identity = 178/281 (63.35%), Postives = 223/281 (79.36%), Query Frame = 2
Query:  152 MAEKLLQNVSRLGGVVALAAAT-EMCLFNVDGGQRAVIFDRFQG-VKEAVVGEGTHFMIPVVQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKRESVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAMLISSALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTGGGN------TNMLLGLN 970
            MA++ L+ + RL GV ++ A T   C++NVDGGQRAV+FD+ +G +   V GEGTHF+IP++Q+PII D+R +PR I S+TGTKDLQM NI LRVL RP ESELP+IY+ELGTDFD+RVLPS+GNEVLK++VA+YNA ELLSKR  VS RIRDE+T RAK FHL  DDV+ITHLTFG EF  AIE+KQVA QEAERQ +VV  ++QER A + RAEGEAEAA +I+ A++++G G+IEVRRID AKEIA  LA SRN+ YLP  GG+      +N+LLGL+
Sbjct:    1 MAQQALKGLGRLAGVASVGAFTVNSCIYNVDGGQRAVMFDQLRGGILPDVSGEGTHFLIPMIQRPIIFDIRTKPREIPSVTGTKDLQMVNIKLRVLWRPTESELPQIYRELGTDFDERVLPSIGNEVLKSIVAQYNAVELLSKRAEVSERIRDEMTKRAKTFHLEFDDVAITHLTFGREFMTAIESKQVASQEAERQQWVVKKAEQERQAMVTRAEGEAEAATIITQAMEKTGNGIIEVRRIDAAKEIAGKLANSRNVVYLPNTGGSGGNGSGSNLLLGLD 281          
BLAST of mRNA_L-elsbetiae_contig1564.3952.1 vs. uniprot
Match: B7G8K0_PHATC (Prohibitin n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8K0_PHATC)

HSP 1 Score: 329 bits (844), Expect = 6.220e-106
Identity = 175/283 (61.84%), Postives = 222/283 (78.45%), Query Frame = 2
Query:  152 MAEKLLQNVSRLGGVVALAAAT-EMCLFNVDGGQRAVIFDRFQG-VKEAVVGEGTHFMIPVVQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKRESVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAMLISSALKESGIGLIEVRRIDTAKEIALTLATSRNITYLP-TGGGN------TNMLLGLNT 973
            MAE +L  + R  GV+A+   T   CLFNVDGG+RAV+FD  +G +   +  EGTHF++P++Q+P+I+D+R + R + S+TGTKDLQM NI LRVL RP+E ELP +Y+ELGTDFD+RVLPS+GNEVLK+VVA+YNAEELLSKRE VS RI++E+  RAK FHL +DDV+ITHLTFG EF KAIE KQVA QEAERQ +VV  ++QER A + RAEGEAE+A +I+ A++++G  +IEVRRID AKEIA  LA SRNI YLP TGGGN      +NMLLG++T
Sbjct:    1 MAEAVLNRLGRASGVLAVGTFTVSQCLFNVDGGERAVMFDTLRGGILPDIRKEGTHFLVPIIQRPVIMDIRTKAREVPSVTGTKDLQMVNIKLRVLWRPIEEELPTLYRELGTDFDERVLPSIGNEVLKSVVAQYNAEELLSKREEVSERIKNEMMKRAKHFHLTLDDVAITHLTFGREFMKAIEAKQVASQEAERQQWVVKKAEQERQAVVTRAEGEAESARIITKAMEKTGNAIIEVRRIDAAKEIAGKLANSRNIVYLPNTGGGNGSSGGGSNMLLGIDT 283          
BLAST of mRNA_L-elsbetiae_contig1564.3952.1 vs. uniprot
Match: A0A7S2HUT8_9STRA (Prohibitin n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HUT8_9STRA)

HSP 1 Score: 327 bits (838), Expect = 5.300e-105
Identity = 182/272 (66.91%), Postives = 210/272 (77.21%), Query Frame = 2
Query:  176 VSRLGGVVALAAATEMC----LFNVDGGQRAVIFDRFQGVKEAVVGEGTHFMIPVVQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKRESVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAMLISSALKESGIGLIEVRRIDTAKEIALTLATSRNITYLP-TGGGNTNMLLGLNTA 976
            ++R+G V   AA T       L++VDGGQRAVIFDRFQGV      EGTH  IP +Q PII D+R+R R + SITGTKDLQM NI LR+LSRP E  L  IYQ+LGT+FDDRVLPS+ NEVLK +VAKY+A ELLSKR+ +ST+IR EL  RA  FHL +DDVSITHL +G EFT AIE KQVAQQEAERQ +VVA +DQER AAIIRAEGE+EAA +++ AL++ G GLIEVRRIDTAKEIA  LA SRNITYLP TGGG   MLLGLN A
Sbjct:   15 LTRIGRVSLAAAGTGFVANNVLYSVDGGQRAVIFDRFQGVLPDARSEGTHLKIPFIQDPIIFDIRSRAREVKSITGTKDLQMVNIWLRILSRPQEEHLSEIYQQLGTNFDDRVLPSIVNEVLKGIVAKYDAVELLSKRQEISTQIRLELEKRAGGFHLTLDDVSITHLVYGKEFTNAIEQKQVAQQEAERQHWVVAKADQERQAAIIRAEGESEAATIVTKALQDCGSGLIEVRRIDTAKEIAGMLAQSRNITYLPNTGGGGAQMLLGLNNA 286          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1564.3952.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVV6_ECTSI9.530e-17497.82Prohibitin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7F... [more]
A0A835Z1F2_9STRA2.370e-12372.89Prohibitin n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A7S0T017_9STRA2.610e-11166.30Prohibitin n=1 Tax=Chromulina nebulosa TaxID=96789... [more]
A0A7S2XWM3_9STRA2.950e-11066.18Prohibitin n=1 Tax=Fibrocapsa japonica TaxID=94617... [more]
F0Y523_AURAN1.300e-10966.18Prohibitin n=1 Tax=Aureococcus anophagefferens Tax... [more]
A0A7S3M2D1_9STRA7.730e-10868.48Prohibitin n=1 Tax=Spumella elongata TaxID=89044 R... [more]
A0A1Z5JUT9_FISSO8.570e-10863.08Prohibitin n=1 Tax=Fistulifera solaris TaxID=15195... [more]
A0A7S4EFZ4_9STRA9.500e-10863.35Prohibitin n=1 Tax=Pseudo-nitzschia australis TaxI... [more]
B7G8K0_PHATC6.220e-10661.84Prohibitin n=4 Tax=Phaeodactylum tricornutum TaxID... [more]
A0A7S2HUT8_9STRA5.300e-10566.91Prohibitin n=1 Tax=Dictyocha speculum TaxID=35687 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1564contigL-elsbetiae_contig1564:14589..22866 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score504.6
Seed ortholog evalue2.9e-140
Seed eggNOG ortholog2880.D7FVV6
Preferred namePHB
KEGG koko:K09228,ko:K17080
Hectar predicted targeting categoryother localisation
GOsGO:0000001,GO:0000003,GO:0000122,GO:0000302,GO:0000981,GO:0001067,GO:0001302,GO:0001541,GO:0001552,GO:0001558,GO:0001664,GO:0001666,GO:0001846,GO:0001848,GO:0001850,GO:0001851,GO:0001932,GO:0001933,GO:0001934,GO:0002082,GO:0002673,GO:0002682,GO:0002684,GO:0002697,GO:0002699,GO:0002920,GO:0002922,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005743,GO:0005746,GO:0005747,GO:0005768,GO:0005769,GO:0005773,GO:0005774,GO:0005886,GO:0005887,GO:0006139,GO:0006140,GO:0006259,GO:0006325,GO:0006355,GO:0006357,GO:0006457,GO:0006464,GO:0006476,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006851,GO:0006950,GO:0006970,GO:0006979,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007548,GO:0007568,GO:0007569,GO:0007588,GO:0008022,GO:0008150,GO:0008152,GO:0008277,GO:0008285,GO:0008406,GO:0008585,GO:0009058,GO:0009059,GO:0009505,GO:0009507,GO:0009536,GO:0009628,GO:0009636,GO:0009651,GO:0009653,GO:0009719,GO:0009723,GO:0009725,GO:0009733,GO:0009755,GO:0009790,GO:0009791,GO:0009792,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0010033,GO:0010035,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0010942,GO:0010944,GO:0010954,GO:0012505,GO:0014070,GO:0016020,GO:0016021,GO:0016043,GO:0016569,GO:0016570,GO:0016575,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019866,GO:0019867,GO:0019898,GO:0019899,GO:0019953,GO:0022412,GO:0022414,GO:0022622,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030001,GO:0030061,GO:0030154,GO:0030162,GO:0030308,GO:0030312,GO:0030421,GO:0030449,GO:0030518,GO:0030522,GO:0030964,GO:0031090,GO:0031099,GO:0031100,GO:0031224,GO:0031226,GO:0031312,GO:0031315,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031347,GO:0031399,GO:0031400,GO:0031401,GO:0031410,GO:0031647,GO:0031871,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0032101,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032870,GO:0032989,GO:0032990,GO:0032991,GO:0033143,GO:0033144,GO:0033554,GO:0033993,GO:0034097,GO:0034220,GO:0034641,GO:0034645,GO:0034654,GO:0035601,GO:0035632,GO:0035902,GO:0036211,GO:0036293,GO:0036294,GO:0040008,GO:0040014,GO:0040018,GO:0042127,GO:0042176,GO:0042177,GO:0042221,GO:0042325,GO:0042326,GO:0042327,GO:0042493,GO:0042826,GO:0042981,GO:0043051,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043401,GO:0043408,GO:0043409,GO:0043410,GO:0043412,GO:0043434,GO:0043467,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044437,GO:0044444,GO:0044446,GO:0044455,GO:0044459,GO:0044464,GO:0044703,GO:0045137,GO:0045271,GO:0045471,GO:0045745,GO:0045861,GO:0045862,GO:0045892,GO:0045893,GO:0045917,GO:0045926,GO:0045927,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0046483,GO:0046545,GO:0046660,GO:0046677,GO:0048232,GO:0048308,GO:0048311,GO:0048364,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048527,GO:0048528,GO:0048545,GO:0048583,GO:0048584,GO:0048585,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048731,GO:0048856,GO:0048869,GO:0050727,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050795,GO:0050821,GO:0050847,GO:0050896,GO:0051094,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051301,GO:0051302,GO:0051640,GO:0051641,GO:0051646,GO:0051704,GO:0051716,GO:0051782,GO:0055085,GO:0060255,GO:0060259,GO:0060548,GO:0060765,GO:0060766,GO:0061024,GO:0061458,GO:0062012,GO:0065007,GO:0065008,GO:0070013,GO:0070372,GO:0070373,GO:0070374,GO:0070469,GO:0070482,GO:0070584,GO:0070588,GO:0070613,GO:0070741,GO:0070838,GO:0070887,GO:0071310,GO:0071345,GO:0071354,GO:0071383,GO:0071396,GO:0071407,GO:0071453,GO:0071456,GO:0071495,GO:0071704,GO:0071731,GO:0071840,GO:0071897,GO:0071944,GO:0072511,GO:0080090,GO:0080134,GO:0090304,GO:0090696,GO:0097159,GO:0097305,GO:0097366,GO:0097708,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098732,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:0098805,GO:0099402,GO:0140110,GO:1900542,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901652,GO:1901698,GO:1901700,GO:1902494,GO:1902531,GO:1902532,GO:1902533,GO:1902679,GO:1902680,GO:1903317,GO:1903319,GO:1903506,GO:1903507,GO:1903508,GO:1903578,GO:1903998,GO:1990204,GO:2000112,GO:2000113,GO:2000257,GO:2000259,GO:2000322,GO:2000323,GO:2001141
EggNOG free text desc.prohibitin
EggNOG OGsCOG0330@1,KOG3083@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000,ko03029,ko04147
Ec32 ortholog descriptionProhibitin complex subunit 1
Ec32 orthologEc-01_002300.1
Exons5
Model size1773
Cds size828
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815641.419032-UTR-L-elsbetiae_contig1564:14588..147391622815641.419032-UTR-L-elsbetiae_contig1564:14588..14739Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1564 14589..14739 +
1691683008.8743486-UTR-L-elsbetiae_contig1564:14588..147391691683008.8743486-UTR-L-elsbetiae_contig1564:14588..14739Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1564 14589..14739 +
1622815641.512087-UTR-L-elsbetiae_contig1564:22072..228661622815641.512087-UTR-L-elsbetiae_contig1564:22072..22866Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1564 22073..22866 +
1691683008.936035-UTR-L-elsbetiae_contig1564:22072..228661691683008.936035-UTR-L-elsbetiae_contig1564:22072..22866Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1564 22073..22866 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815641.434841-CDS-L-elsbetiae_contig1564:14739..148041622815641.434841-CDS-L-elsbetiae_contig1564:14739..14804Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1564 14740..14804 +
1691683008.8861277-CDS-L-elsbetiae_contig1564:14739..148041691683008.8861277-CDS-L-elsbetiae_contig1564:14739..14804Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1564 14740..14804 +
1622815641.4512115-CDS-L-elsbetiae_contig1564:17013..172231622815641.4512115-CDS-L-elsbetiae_contig1564:17013..17223Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1564 17014..17223 +
1691683008.8955927-CDS-L-elsbetiae_contig1564:17013..172231691683008.8955927-CDS-L-elsbetiae_contig1564:17013..17223Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1564 17014..17223 +
1622815641.4689877-CDS-L-elsbetiae_contig1564:18143..182401622815641.4689877-CDS-L-elsbetiae_contig1564:18143..18240Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1564 18144..18240 +
1691683008.9051242-CDS-L-elsbetiae_contig1564:18143..182401691683008.9051242-CDS-L-elsbetiae_contig1564:18143..18240Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1564 18144..18240 +
1622815641.4830112-CDS-L-elsbetiae_contig1564:20132..203181622815641.4830112-CDS-L-elsbetiae_contig1564:20132..20318Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1564 20133..20318 +
1691683008.9147482-CDS-L-elsbetiae_contig1564:20132..203181691683008.9147482-CDS-L-elsbetiae_contig1564:20132..20318Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1564 20133..20318 +
1622815641.4996653-CDS-L-elsbetiae_contig1564:21802..220721622815641.4996653-CDS-L-elsbetiae_contig1564:21802..22072Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1564 21803..22072 +
1691683008.9271135-CDS-L-elsbetiae_contig1564:21802..220721691683008.9271135-CDS-L-elsbetiae_contig1564:21802..22072Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1564 21803..22072 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1564.3952.1prot_L-elsbetiae_contig1564.3952.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1564 14740..22072 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1564.3952.1

>prot_L-elsbetiae_contig1564.3952.1 ID=prot_L-elsbetiae_contig1564.3952.1|Name=mRNA_L-elsbetiae_contig1564.3952.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=276bp
MAEKLLQNVSRLGGVVALAAATEMCLFNVDGGQRAVIFDRFQGVKEAVVG
EGTHFMIPVVQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLES
ELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKRESVSTRIR
DELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVA
LSDQERLAAIIRAEGEAEAAMLISSALKESGIGLIEVRRIDTAKEIALTL
ATSRNITYLPTGGGNTNMLLGLNTA*
back to top

mRNA from alignment at L-elsbetiae_contig1564:14589..22866+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1564.3952.1 ID=mRNA_L-elsbetiae_contig1564.3952.1|Name=mRNA_L-elsbetiae_contig1564.3952.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8278bp|location=Sequence derived from alignment at L-elsbetiae_contig1564:14589..22866+ (Laminarionema elsbetiae ELsaHSoW15)
GTCGACAGCGCCCCGGAGCAAAACGTGTTGCCTCTTCCTTTGAGTTTCCC GAGGGAATTTGCTCTCCACAAAAGTAACTTGCGGCAGCAGAGAGCTCTCT CACACGCGCAGGAGGCTAGGGCTTTTGCAGAGGCAGGGACAGGAAGGAAG CATGGCGGAGAAGCTTCTTCAAAATGTGTCCCGGCTAGGCGGCGTGGTGG CATTAGCAGCAGCGACGTGAGTGTACTTGGAAGCGTACTTCTCTGTGCCC GCCTGCCACGTTTGGTTCTGCGTGTACTCTTTTTGGGGACCGCTCGGGGG ATGGGATTGACTCACCGACCGTGTGGCTCTGATACGACAGCAACCAGCAG GCAGTGGCGTCTCTTGGAAGTACAAGTGTAGCGGGATAATTGACACAGAT GTAGGGGCAGAAATCATGGCTCCGTCGTGCATACTCCCCATCCAAGCCAT CCTTTCTCGCGTTCCCTCCTCTTGTCCACTTTCCCTCTATTGTAAAAACA GCCCGCTTTTCTCCCTGCCTGCCTCTCTCTCTCTCTCGAGTCCCGATACA CTACGCTGTTGTTGCATCCCGCTATCCCGCTGCCCGAAACTCTTGTGACA GTGGGCTGGTGTGCGGGGTTTTATCTCGATCCTTAGCATTGCGTTTTGTC CTAGTCGCTCTCTCCGCAACCAAGACACCCACAACACGGCAGCACCGTCG TGACAACAGCGTTTCACCAGATCTACTACTGCTGACTAACCCTGGTGCAA CACGGGACCATCAGGTACAGCACATGACTTTACAGCTGTACAGCTGTCGC ACTAGATGCCATAGAGTGCATGAGTTAGCACAGGGGCTCGATAGTTTTCC AGGACCCCTAATCTCGACAGTGGGGAGTACGATATGCCAAGATGTCGGAG AGGGTGTCGCTGGGAAGACCTTGACGAGAGGCCTTCCGCAAATCGGATTG TTAAGGTCGGTAGTTGTCTACTTCTTCCCCTTTGTCGAGATATCGGGCCG TGCAAAAAAACGTACCGCATCCCTCTGCGCGGATTCAACCCTCAATTGCG GCACTGCGGCACAACACAGTTTGGTCACACATTTGCGGATGGAAGAGACG CACTTCATACGTAAAAAGAGATGGTGCATTTCCGTGCGCGGCGTTTACAA CCCCCGTTGGACCTTTTGGAATCCCCCCCGCCCCCCGCCCCCCCTCAAAG GAGATAACAGAGGCTTCCTGCTAGAGCCCTCAATTCTCAAAAAGAACTGT GGGGGCAGCGGGGGGGGGGTGTTCATCTAGGAAATACCGTAGGTGACAAA AGATACCACACCCCTTGGACCGAATTTTGGAGCTCGATTACTCCGTTACG AAGAGGGTTCCAGCACCAAACGGCACATTTTCGGACAGCCCCCGACTAAT ATTTTTGTACGCCGCCCTTTTCGGCACTTGCACTCTTCTTGCTGGGAAGG AATCGAGCTCCAAAAATCTGTCCAGGGGGGTGTGGTACCTTTATCTTGTG TAACCTACGGTATAGAGTGAAAAATCCCCCACAGAGTAAAAGCCACTTTT TCAGGACTGGGGGCCCTGCTGCAGGAGGTAACACAAGATACCACACCCCC TGGGCCGAAGTTTAGAGCTCCATTACTCCGCAACGAAGAGGGTGCCGGCA CCAAACGACACAATTTCGGGTAGCCCTCGGCTGGATCTTTCCAACGCGCC CCCCTTTTCGGCACTGGCGCTCTTGTTGCTGGGGGGGAGGAATCAAGCTT TGAAAATCTTGTCTAGGGGGTGTGGTATCTTGTGTCACCTACGGTAGTGG GGGCGGAGTAGGGAGCTCCAGATGCGATGGCCCTCTTGTGCCGTACCAGT GCCAACTTTTCAGCACTTGTGGTAGCCTACAGCAGTAGTTTCCTCTTGAA CGTGCTTTTGTCTTTGTACCTAAGACATTTTTTTTTTTTGTCTGCCCATT ATTGGCTTTTTGTCGTCTGCCCTCTGGCCCCCATCCTCCACTTCTACTCT AGCTAGACGACCTAACCGGGGTCACATAGGAGGGGGGGGTTGGACCCCCT CCTGACATGCATGGGACCGACGAGTGCGCGACCTTCCTCTGCTGCTGATT TCTGAGCTTCACGACCACAACGGGACCATCTACAGGGTACCCATATAGGA CTACGCCCGCCACCCTTTTGCCCCCCCCCCCCTCGTGGCCCCTACCCACC GACCTCCGCAGCGTCTCCCCCTCAGAAGAAACCGAAAACACACATCTTCG TGCATCTTATGAAAGTCTCGTTCTCTTGCTGCGTATGCATCATATGTACA GAAGAGCAAAACGAGAACCTTCGAGTGTCTCTGATGAATGTGGGCGGATG CGCGATCTGATTGGTCTGCTTTCTCCGTTCTTCCTGAAACGAAACGATAA ACTACGCGAAACGGAATAAAAACAGAGAGATGTGCCTGTTCAACGTGGAC GGCGGGCAGCGGGCGGTCATCTTCGACCGATTTCAGGGTGTCAAGGAGGC GGTAGTGGGGGAGGGGACGCACTTCATGATCCCCGTGGTGCAGAAGCCCA TTATCATCGACGTGCGCGCGAGACCCCGCACCATCAACTCCATCACGGGA ACCAAGGACCTGCAGATGGCCAACATCTCTCTCAGGTGCGTTTTTTTCAG TCTTGAGCCCCAGGCAGCCAGCAGGCAGCCCAGGCAGGGCAGTCGGTGTC GTGGAGATTTTCAATGCGTGTACCGACATCTCTCTCTCTCTCTCACAAGT TTGCATGTCGTTTTGTTCCATACCTCGAGAGTAAGAAACACCCCAAGGCA GCTATTGTAATGTACGCGACGTCTCGTCGTCGCTCGCTGCGTACCATGCG ATGTTTCTGCCTCGTGTACCTAGTTATAAGTCGACCCTGCAGCAGGGGCC CCAGTTCTGAAAAAGTGGCTTGTGGGGGAGGTTTCACTGCCTATTTACTA GATAACCCCCCCCTCCCCCCCGCTGCCCCCACAGCTCTCTTTGATAATTG GGGGCTCTATTGCAGAAAGCCTATAGCCTGCTTGCGTCGTTTGGTCCGAG GCTGCTCCCACTGGATTGCGGTATTGTCGGCGTTGGAAGTGGGGTCCGTG GATACCCTTCATCTGAGAACAGGCTCGAACCGCGACGCACCGCCGCCACT TAACCCTCACCAGCACCGACGACAACAGCGAAGAACGGATCGCGAGTGAT GCACGCTCGCTGGACGCCGCGTGAAAGCTTTTGGAAACCTTTCCCCAAAT CTCTCCGTTAATAGCGTTTTGTCATTATATTCTTGTTTGGCATGACACAA CTCGCTCTATTTGAAGGTTCACCGGAGATACACCAGGTCCGTCTCCCTCA AGCTTGTTTTGCTTTGCACGCCCCTGCAGTCTGTGACCATGTCCCGCTCG CGACGAACCCTTGGTGCATGGGATTTTTCCTGGACACTCAACTAAATACT GCCCCTTGTTTTGGGAATTACCCCGAATATATCGTTGTCCTCTCTTGACA TCTCTCTCTCTCTCTCTCTCTCCCCCTCCCCTATCCGTCTCTTATCTTCA ACCAGGGTTCTGTCTCGACCGCTGGAGTCGGAGCTGCCCCGTATCTACCA GGAGCTAGGCACCGACTTCGACGACAGGGTTCTGCCGTCGCTGGGAAACG AGGTAAATCACGGTGGCAGTTTTGGGTGTACGCATGTATATATATATGTA TGTACCAGCACTGTTTAGTGTGTGTGTGTATGTGTTTTGTTTCCCTCCCA TGGTTGGCTTATTCGTTTTGTCTGCCCCACTGGCACCCTTCCTCCACTAC GGCCACCTATGTTTGTTTGTATGTATGCGTGTACGTACGTACAATGGTGC CCCTCAACCAATCTCTGGGAGTGGCGTCGGGCGTGCGACGACCGGGGGCA CACAGATAGTGCTCGTTTGACAAGCCACGGAAGATGGCGCTTGCAGGAGT ATATCCTTACAAGCCGCCGTCGCCAACCACGGCTTGACACAGCATGGCGA TGGCAAGAGCTAGTCTTGGTTTAGCCCTTGTAGCTTGGGGTCGAACTCAG TTCGGCAGGAAAATAGGCGTGTGGGGGTTAGAATGTCGAACGCGTCGTGT AACTTTGGTCTGATTTGGGGCGGGTTCGTGGTTGTGTCCCGGCGTGGGGT GCCTCGGCGGCCCCGGGTCATCAGGGAGGGGGAGGGAGGGGGCGCCGTCA ATCGCCCTGATGCATGTTGATAATTTTAGGATAGTTTCAGGGTTCGCACC GAACACGTGCCCGCAGTTTCGGTCAAAGCCGCAACAAACGCATTGTGGAT CCTACATACATACGCCAGTGGTGGTTCTCTCGCGTCTGTGGCCCACGGAG CATGAAAAATGGTCTATTCGTTCTCCTCTCGGGCCCCCTTCGTGTTCCCG CTCGAACGCGCGCAGCTGCTGGTTAAATTGCTTGTTGACTCGTCCTTTCG GTACAGCAGTAGGGGTTTGACTGGTTGGCTGTTACGTGCACCCGTGAAGT GCTTCAAGTGGAAAGGTCTCACAGGCACCGACCCGCTCGTGGAGGAGAAC CGCAGCCTGACTTTTCTAGGATACATATATGTGCATGCCAGGCCAAGAGC CGAGCATTCGACTGGTTGCTCTAGTTAATGAGCCCAGTGTGGCACTCGCC TTGGGTTCGATCAGCTGTACAGACTCTTGCCGTTGTTCGGGTGTTGTTCC TCAGCGCTCGTTTTTTTTCCTTCTTGTCAGCGGGCCGGTAGGTTGTAGTC CCGGTCGCCGCAACCCCGACCTCGGCGCAGCAGAAACCTTCGTTTTATTT CATTTTTTTCTTTGCCGGCCGTCTGCCTCCTTCCGTGTGGTTAAAAATAG AACTCAGTGAATCAAAAATGGAACCTATTCAACCCACGCTAGAGACGGGA TTCCGTGGGATTCAGCCGGTATTCCATTGAGGCTAGTGACGTAGTATTGG TTCAGTGAAAAAGTAGATACCATCTGAGGTATCAGTGGTTGATTTCAAAC CACCCTCTCGCTTGTACAAGGAGTCGAGCAGGGACGACTGCGAAGAGATT TATTAAGAAGGCGCAGAGCGCGCGAAGTTCAAACTTCGACCTCACCGTCG GCGAGGGAAAGGGACGGCTGAACACCCTTCTCGCGACAAAAAAGCTTAGG CAAGCGCCGCAGAAGGGGGGGAGTGGGGACTGTCAACGGGACTGTCAACG GGACTGTCTATATGTTACCGCGACAAAAAGCTTAGGCAAGCACGGCAGAA AGGGGGGAGAGTGGGGGCCGGCCTCGGGGAAAGGAAAACCCTTCTGTTTG ACCACGGCTCAGTATTCTGGCGAGATGCGCACCTCGTGGCAAGCAGCCAG CCCATCGAGCACTGGGAATAAATGAAAAGAAAATGTCTGCGAGAAGAGAT TCAGAGAACTCAGGCCGCTCAACTCGTATTGTGTTTCCCCCCGTGTTTTC GCGACTTGCTTGCCTGCCCCGCGGCCCCTTCTTCGTGCCGGTCGTCTGCC GGTTGGGGGTGACGGCCTGTCGGCACACTCTGTGTACCCCCCAGGTCCTC AAGGCGGTGGTGGCCAAGTACAATGCCGAGGAGCTCCTCAGCAAGCGTGA GTCCGTTAGCACCCGCATCCGCGACGAGCTTACCCACCGGGCGAAGCAGT TCCACCTCATCATGGACGACGTCTCGATCACCCACCTCACCTTCGGACAC GAGTTCACCAAGGCTATCGAGAACAAGCAGGTGGGTGCATTATTAAGGTG TCAAATCAATAAATCGCTCCACGTGTAACAACATGCCTGCCGTGGAAAGC TGGGCATTAAGGTGCCAATCCCTCCATGTGTAACAACATGCCTGCCGTGG AAAGCTCTGGGCATTCAGGTGCCAATCACTCCATGTGTAACAACATGTCT GCCGTGGAAAGCTCTGGGCATGCATGCATGCGCGCTTGGAAATAGTGTTT TTTTTCGTCCTCTGGTCGCGTCCACCGCGGCAACCGAGCTCATGACGGAG CCAGCCAGCTCCCTCCTGCGACAGCGGAATGTTTGGCGAGGTTTTTGCCC ACAAGCGTGTCACCGCAGAAGAATACAAGGGCTCTTTTCTTCCGGGGATG TTTACGGGTCGGGTCAACCTGACGGGTCAGGTGCGGGACAGGTGCGGGTC AGCTGACCCGACCCGACCCGTCAGATTTTTCCATCCCGGGTCACTGACCC GACCCGACCCGTCAAACGGATGAAGCGTTTTGACCCGACCCGCAGAAGAA TACAAGGGCTTTTCTTCCTCTGGGTCTATCTAGCTCGGTCTTGTCTCTCG TTTTTTTTTTTGTTTTAGTTGTCTGTGGGTGTTGGCCTCATTCCCGCTAT ATGCGTTACTTCATACAATACCACTTGCCGTGATTTCCGCAGCTCGGTGA TGGGTTGAGCTGCTGTCAACATCAATGTACGCGCCCCTGTCCTTCCTCAA GATGCATTTGTGCTCGCTCTGCATATCATATGTCTGCACGAATGTGAAAT CGCAGAAAATAAGAAAAACAAATCGTGGTCATCATCTCAGCCAACCAAAA TCACCCCATCAAAAATACTACCATATGGTATTTATGTTGAATTTTTCACG TGTGGGTGAGCCCTTCTCTCAACCTTGCCCCCTTTGTTTCACCCCAACAC CATTAGTACGGACAGATGAAGGTACTGGATAGAATTATCGGAACGGTTTT TTATTGTGAAGGCAATTACAACAACAACCGCATCGCCGGGCGTGGTACCA CCAATTACTAATTACCGCCATACATACCACTGCTTACCCCTCACATCGAA CGCTCCCCTGGCCGCCGTCGCGATGATGGCACATTTAACGACGATTGTAT AGAAAGCTCAGGAACGGAGACTGGCACTAGCTGTGATCTTCCGCTCAGGA TACGATCTTATGTACATAGCTGGCTGGCTGTATCTGTGATACTCCGGTCA CGACACGATCCTAGCTGGCTGGCTCTTTCTGTGATACTCCGGTCAGGATA CGATTCTATGTAGCTGACTGGCTCTATCTGTGATAACTCCGGTCCGGTCA GGATACGATCCCGTGTGTAAGCTGTCTCTCATCTGATGACGTCACTCTTA CGGGCTATTTAATCCAGAGTTGTGGCATGACACTCACAATCATCCCCCCC CCCCCCTCATTTTTCTTGTTTTTCATTCATTTCACCTCTCTGTGTCTGTC GCTCTCGCTCAAAGGTGGCGCAACAAGAGGCAGAGAGGCAGGTGTACGTG GTGGCCCTGTCGGACCAGGAGCGGCTGGCGGCGATCATCCGCGCGGAGGG CGAGGCGGAGGCGGCCATGCTGATCTCGTCGGCGCTCAAGGAGAGCGGCA TCGGCCTCATCGAGGTGCGGCGCATCGATACGGCCAAGGAGATCGCGCTC ACCCTCGCCACCTCGAGGAACATCACCTACCTGCCTACGGGTGGCGGCAA CACCAACATGCTGCTGGGTCTCAACACGGCATAAGCTTTTTTAGACAGAG AATAAGGAAGGAGGACGAAAAAGGAGAGCGAGACAGACCTACCTGGTTTA TTGAAAGTTTGGCGTTGTTGGGGGTTTTAGACGTCGGGGGAGGGGGGGAG GATTCCTCGTAACGACTTTTCTCGGCATAAGTGAGGGGTCAGGGGTGTTT ATCGTCGTTTTTGCGGGGAAAACGAGGGGTGGAGTGAAGACCAGCACGGA CCTTTTTTGCATGAGGGTATGTATTTCCGTCCGCTTCTGGATTGTTTGTG AGACAGTGATGAGAAAAGCGCTGCAGGCATATATATATATATGCTTGTGA GCGTCTCTGGTCGTCTTGTTGGGAGCAATCATCACTACCGAAACGCCTGT GTGGGTATGCAGCTATAGCCCTAGCCTCGTCTGAGTACCTACCCCCTGTC GTTGATCGACTCTCTCCGTGCCACGTTTTTTTAGAGAAAAAGCGACCGCC GGTGGTGGTTAGTGTTTTTGTTTTTCGTGTCTGCTCTCCAATCTCCCTGA AAAACAAACATCTTATCTCGAGAGTTGTGCACGCGGCAACGCGTTCGGTT CTGGAATGATGGCACAGAACTACTGTGGAATATAACCGCGATGGAATCCA TTGCGGCAACCCCAGGCCGCCCAGAAAGAAAACCGACGGAATTTGCCATG TGTGGGTAGACAGATAGCCAACGCTTGTTTGTGTGCGCGAGAGCCACACT ACAATACTGCCAGGGAATTGTTCGGGTTCCCAGCGTCGAGACTTGCCCGT GACACTCGAAAAACAAATATCTTTTCAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1564:14589..22866+

>mRNA_L-elsbetiae_contig1564.3952.1 ID=mRNA_L-elsbetiae_contig1564.3952.1|Name=mRNA_L-elsbetiae_contig1564.3952.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1656bp|location=Sequence derived from alignment at L-elsbetiae_contig1564:14589..22866+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGGAGAAGCTTCTTCAAAATGTGTCCCGGCTAGGCGGCGTGGTGGC
ATTAGCAGCAGCGACATGGCGGAGAAGCTTCTTCAAAATGTGTCCCGGCT
AGGCGGCGTGGTGGCATTAGCAGCAGCGACAGAGATGTGCCTGTTCAACG
TGGACGGCGGGCAGCGGGCGGTCATCTTCGACCGATTTCAGGGTGTCAAG
GAGGCGGTAGTGGGGGAGGGGACGCACTTCATGATCCCCGTGGTGCAGAA
GCCCATTATCATCGACGTGCGCGCGAGACCCCGCACCATCAACTCCATCA
CGGGAACCAAGGACCTGCAGATGGCCAACATCTCTCTCAGAGAGATGTGC
CTGTTCAACGTGGACGGCGGGCAGCGGGCGGTCATCTTCGACCGATTTCA
GGGTGTCAAGGAGGCGGTAGTGGGGGAGGGGACGCACTTCATGATCCCCG
TGGTGCAGAAGCCCATTATCATCGACGTGCGCGCGAGACCCCGCACCATC
AACTCCATCACGGGAACCAAGGACCTGCAGATGGCCAACATCTCTCTCAG
GGTTCTGTCTCGACCGCTGGAGTCGGAGCTGCCCCGTATCTACCAGGAGC
TAGGCACCGACTTCGACGACAGGGTTCTGCCGTCGCTGGGAAACGAGGGT
TCTGTCTCGACCGCTGGAGTCGGAGCTGCCCCGTATCTACCAGGAGCTAG
GCACCGACTTCGACGACAGGGTTCTGCCGTCGCTGGGAAACGAGGTCCTC
AAGGCGGTGGTGGCCAAGTACAATGCCGAGGAGCTCCTCAGCAAGCGTGA
GTCCGTTAGCACCCGCATCCGCGACGAGCTTACCCACCGGGCGAAGCAGT
TCCACCTCATCATGGACGACGTCTCGATCACCCACCTCACCTTCGGACAC
GAGTTCACCAAGGCTATCGAGAACAAGCAGGTCCTCAAGGCGGTGGTGGC
CAAGTACAATGCCGAGGAGCTCCTCAGCAAGCGTGAGTCCGTTAGCACCC
GCATCCGCGACGAGCTTACCCACCGGGCGAAGCAGTTCCACCTCATCATG
GACGACGTCTCGATCACCCACCTCACCTTCGGACACGAGTTCACCAAGGC
TATCGAGAACAAGCAGGTGGCGCAACAAGAGGCAGAGAGGCAGGTGTACG
TGGTGGCCCTGTCGGACCAGGAGCGGCTGGCGGCGATCATCCGCGCGGAG
GGCGAGGCGGAGGCGGCCATGCTGATCTCGTCGGCGCTCAAGGAGAGCGG
CATCGGCCTCATCGAGGTGCGGCGCATCGATACGGCCAAGGAGATCGCGC
TCACCCTCGCCACCTCGAGGAACATCACCTACCTGCCTACGGGTGGCGGC
AACACCAACATGCTGCTGGGTCTCAACACGGCATAAGTGGCGCAACAAGA
GGCAGAGAGGCAGGTGTACGTGGTGGCCCTGTCGGACCAGGAGCGGCTGG
CGGCGATCATCCGCGCGGAGGGCGAGGCGGAGGCGGCCATGCTGATCTCG
TCGGCGCTCAAGGAGAGCGGCATCGGCCTCATCGAGGTGCGGCGCATCGA
TACGGCCAAGGAGATCGCGCTCACCCTCGCCACCTCGAGGAACATCACCT
ACCTGCCTACGGGTGGCGGCAACACCAACATGCTGCTGGGTCTCAACACG
GCATAA
back to top