mRNA_L-elsbetiae_contig15630.3945.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig15630.3945.1
Unique NamemRNA_L-elsbetiae_contig15630.3945.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig15630.3945.1 vs. uniprot
Match: D7FGZ5_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGZ5_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 3.810e-109
Identity = 161/173 (93.06%), Postives = 168/173 (97.11%), Query Frame = 1 
Query:    4 FTQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQEHGHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGSKNSRNCRELMKILKESDNIVPPEL 522
            + QVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQ+HGH GKVLVFVETKKGCDALTRSLRQDGYQARCIHGDK+QEERD+VLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKG+AVSFFGSKNSRN REL+KIL ES+N VPPEL
Sbjct:  329 YYQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQQHGHNGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKTQEERDYVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGRELIKILTESENHVPPEL 501
[Close]
BLAST of mRNA_L-elsbetiae_contig15630.3945.1 vs. uniprot
Match: D8LL45_ECTSI (Ethylene-responsive DEAD box RNA helicase, putative (RH30) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL45_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 1.330e-81
Identity = 129/176 (73.30%), Postives = 143/176 (81.25%), Query Frame = 1 
Query:    1 LFTQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQEHGHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGSKNSRN--CRELMKILKESDNIVPPEL 522
            +  QV VGSLELAANKDIKQIIECTE+FNKYRSL KHLQ+HG  G +LVFVE              D YQARCI GDK++E RD+VLKDFK GNFQVLVATDVAARGLD+K+IQMVINFDFPNNMED++HRI RCGRAGAKG+AV+FFGSKNSRN  C EL+KIL ES N VPP L
Sbjct:    3 MHVQVKVGSLELAANKDIKQIIECTEEFNKYRSLCKHLQQHGRNGNLLVFVE--------------DSYQARCIQGDKTREGRDYVLKDFKSGNFQVLVATDVAARGLDMKEIQMVINFDFPNNMEDFMHRIKRCGRAGAKGVAVNFFGSKNSRNNGC-ELIKILTESGNNVPPVL 163
[Close]
BLAST of mRNA_L-elsbetiae_contig15630.3945.1 vs. uniprot
Match: A0A6H5KBB2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBB2_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 2.330e-79
Identity = 122/173 (70.52%), Postives = 143/173 (82.66%), Query Frame = 1 
Query:    4 FTQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQEHGHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGSKNSRNCRELMKILKESDNIVPPEL 522
            + QVTVGSLEL+ANKDI+Q+IE  EDF KYR L KHLQEH + G+VL+FVETKKGCDALTRSLR +G+ A  IHGDK+Q ERD VL DFK G   +LVATDVAARGLDVKDI+MVINFDFP  ME Y+HRIGRCGRAG KG A+SFF +KNS+  REL++ILK+++  VP EL
Sbjct:  226 YYQVTVGSLELSANKDIQQVIEIVEDFGKYRVLVKHLQEHNNAGRVLIFVETKKGCDALTRSLRHEGWPALSIHGDKNQSERDRVLHDFKEGRSLILVATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAAKNSKCARELIRILKQANQKVPSEL 398
[Close]
BLAST of mRNA_L-elsbetiae_contig15630.3945.1 vs. uniprot
Match: A0A7S2XX29_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX29_9STRA)

HSP 1 Score: 252 bits (643), Expect = 6.330e-79
Identity = 120/173 (69.36%), Postives = 145/173 (83.82%), Query Frame = 1 
Query:    4 FTQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQEHGHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGSKNSRNCRELMKILKESDNIVPPEL 522
            + QVTVGSLEL+ANKD+ QIIEC EDF KYR L +HL+E G   K L+FVETKKGCDALTRSLR DGY ARCIHGDK+Q+ERD+VL++F+    ++LVATDVAARGLDVK+I  V+NFDFP NMEDY+HRIGRCGRAGAKG A+SFF SKN++  REL++IL ++ + VP EL
Sbjct:  313 YYQVTVGSLELSANKDVTQIIECLEDFGKYRKLQEHLREGGGHLKTLIFVETKKGCDALTRSLRMDGYHARCIHGDKNQDERDWVLREFREDKIELLVATDVAARGLDVKNIVRVVNFDFPGNMEDYVHRIGRCGRAGAKGTAISFFASKNAKMARELIEILNKNGSHVPQEL 485
[Close]
BLAST of mRNA_L-elsbetiae_contig15630.3945.1 vs. uniprot
Match: A0A6S9KNI1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KNI1_HETAK)

HSP 1 Score: 239 bits (609), Expect = 7.540e-74
Identity = 114/173 (65.90%), Postives = 144/173 (83.24%), Query Frame = 1 
Query:    4 FTQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQEHGHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGSKNSRNCRELMKILKESDNIVPPEL 522
            + QVTVGSLEL AN DI+Q+IE  ED+ KY  L +  +  G   K LVFVETK+GCDALTRSLR DG+ ARCIHGDK+Q+ERD+VLK+F+  + ++LVATDVAARGLD++DI+MV+NFDFP+NMEDY+HRIGRCGRAGAKG AVSFFGSKN++  REL++I++E+ + VP  L
Sbjct:  308 YYQVTVGSLELQANADIEQVIEICEDYGKYAKLQETFRSRGGP-KALVFVETKRGCDALTRSLRLDGFHARCIHGDKTQQERDWVLKEFRENHCKILVATDVAARGLDIRDIEMVVNFDFPSNMEDYVHRIGRCGRAGAKGTAVSFFGSKNAKLTRELVRIMREAGSAVPSSL 479
[Close]
BLAST of mRNA_L-elsbetiae_contig15630.3945.1 vs. uniprot
Match: A0A835ZEN1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEN1_9STRA)

HSP 1 Score: 233 bits (595), Expect = 2.740e-72
Identity = 113/173 (65.32%), Postives = 140/173 (80.92%), Query Frame = 1 
Query:    4 FTQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQEHGHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGSKNSRNCRELMKILKESDNIVPPEL 522
            + QVTVGSL+L+ANKDI+Q +E  ED++KY  L ++L+EH   G+VL+FVETKKG D L RSLR DG+ A  IHGDK+Q+ERD+ LK+F+ G   +LVATDVA+RG+DVKDI+MVINFDFPNN+EDYIHRIGR  RAGAKG +V+FF SKN+R  R+L KIL ES N VPP L
Sbjct:  264 YYQVTVGSLDLSANKDIRQYVEVLEDWDKYSKLLQYLREHNDGGRVLIFVETKKGADQLVRSLRADGWPANAIHGDKTQDERDYALKEFREGRKNMLVATDVASRGIDVKDIRMVINFDFPNNLEDYIHRIGRTARAGAKGTSVAFFTSKNARCARDLAKILSESGNDVPPAL 436
[Close]
BLAST of mRNA_L-elsbetiae_contig15630.3945.1 vs. uniprot
Match: A0A6S9IVW3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9IVW3_9STRA)

HSP 1 Score: 225 bits (573), Expect = 2.000e-70
Identity = 117/175 (66.86%), Postives = 139/175 (79.43%), Query Frame = 1 
Query:    4 FTQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQEHGHV-GKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGS-KNSRNCRELMKILKESDNIVPPEL 522
            F QVTVGSL+LA NKD+ Q+IE   D +KYR+L KHL+E+     +VLVFVETKKGCD LTRSLR DG+QAR +HGDKSQEERD+VL++FK     +LVATDVAARGLDV DI+MV+NFDFPN+ME YIHRIGR GRAG KG+AVSFF S KN R  REL+ IL+ +   +P EL
Sbjct:  139 FYQVTVGSLDLAGNKDVTQVIEVCSDQDKYRNLLKHLRENLTAKDRVLVFVETKKGCDMLTRSLRMDGFQARAMHGDKSQEERDWVLREFKSCQSTLLVATDVAARGLDVDDIRMVVNFDFPNDMESYIHRIGRTGRAGKKGVAVSFFVSQKNGRLARELIDILQRTHQNIPGEL 313
[Close]
BLAST of mRNA_L-elsbetiae_contig15630.3945.1 vs. uniprot
Match: A0A4D9CVW6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVW6_9STRA)

HSP 1 Score: 224 bits (570), Expect = 1.170e-69
Identity = 115/171 (67.25%), Postives = 133/171 (77.78%), Query Frame = 1 
Query:   10 QVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQEHGHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGSKNSRNCRELMKILKESDNIVPPEL 522
            QVTVGSL+LAANKDIKQ +   ED +KY  L + L+E+   GKVLVFVETK+GCD L RSL+ DG+ A  IHGDKSQ++RD+ L+ FK G   +LVATDVAARGLDVKDIQMV NFDFPNNMEDYIHR+GR GRAGAKG A+SF   K+ R  REL KIL+ES N VP  L
Sbjct:  175 QVTVGSLDLAANKDIKQEVMVCEDRDKYGLLLRALKENNTGGKVLVFVETKRGCDQLQRSLQMDGFSAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYALSFVTQKHGRISRELSKILEESGNQVPAAL 345
[Close]
BLAST of mRNA_L-elsbetiae_contig15630.3945.1 vs. uniprot
Match: A0A7S3Q052_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q052_9STRA)

HSP 1 Score: 227 bits (579), Expect = 4.140e-69
Identity = 116/175 (66.29%), Postives = 139/175 (79.43%), Query Frame = 1 
Query:    4 FTQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQEH-GHVGKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGS-KNSRNCRELMKILKESDNIVPPEL 522
            + QVTVGSLEL  NKD+ Q +E   D +KY +L +HL+E+     +VLVFVETKKGCD LTRSLR DG+QAR +HGDKSQ+ERD+ LK+FKG    +L ATDVAARGLDV DI+MV+NFDFPN+ME+YIHRIGR GRAG KG AVSFF S KN+R  RELM+IL  +D +VPPEL
Sbjct:  335 YYQVTVGSLELTGNKDVTQCVEVCSDQDKYGNLLRHLRENLTDKDRVLVFVETKKGCDMLTRSLRSDGFQARAMHGDKSQDERDWALKEFKGRQSTLLCATDVAARGLDVDDIRMVVNFDFPNDMENYIHRIGRTGRAGKKGTAVSFFVSDKNARIARELMEILNRTDQVVPPEL 509
[Close]
BLAST of mRNA_L-elsbetiae_contig15630.3945.1 vs. uniprot
Match: A0A7S1YW91_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YW91_TRICV)

HSP 1 Score: 224 bits (571), Expect = 1.950e-68
Identity = 114/175 (65.14%), Postives = 140/175 (80.00%), Query Frame = 1 
Query:    4 FTQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQEHGHV-GKVLVFVETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGS-KNSRNCRELMKILKESDNIVPPEL 522
            + QVTVGSL+LA NKD+ QI+E   D +KYR+L +HL+E+     +VLVFVETKKGCD LTRSLR DG+QAR +HGDKSQEERD+VL++FK     +LVATDVAARGLDV DI+MV+NFDFPN+ME Y+HRIGR GRAG KG+AVSFF S KN R  REL++IL+ +   + PEL
Sbjct:  286 YYQVTVGSLDLAGNKDVTQIVEVCSDQDKYRNLLRHLRENLTAKDRVLVFVETKKGCDMLTRSLRMDGFQARAMHGDKSQEERDWVLREFKSCQSTLLVATDVAARGLDVDDIRMVVNFDFPNDMESYVHRIGRTGRAGKKGVAVSFFVSQKNGRMARELIEILQRTSQNISPEL 460
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15630.3945.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGZ5_ECTSI3.810e-10993.06DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
D8LL45_ECTSI1.330e-8173.30Ethylene-responsive DEAD box RNA helicase, putativ... [more]
A0A6H5KBB2_9PHAE2.330e-7970.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XX29_9STRA6.330e-7969.36Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6S9KNI1_HETAK7.540e-7465.90Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A835ZEN1_9STRA2.740e-7265.32DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A6S9IVW3_9STRA2.000e-7066.86Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A4D9CVW6_9STRA1.170e-6967.25Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3Q052_9STRA4.140e-6966.29Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1YW91_TRICV1.950e-6865.14Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15630contigL-elsbetiae_contig15630:1205..1726 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score330.1
Seed ortholog evalue6.2e-88
Seed eggNOG ortholog2880.D7FGZ5
Preferred nameDBP2
KEGG koko:K12823
KEGG Pathwayko03040,ko05202,ko05205,map03040,map05202,map05205
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000184,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003729,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008026,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010501,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019439,GO:0022607,GO:0022613,GO:0022618,GO:0030554,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0034470,GO:0034622,GO:0034641,GO:0034655,GO:0034660,GO:0035639,GO:0035770,GO:0036094,GO:0036464,GO:0042254,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043186,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043632,GO:0043633,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045495,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0051179,GO:0060255,GO:0060293,GO:0065003,GO:0065007,GO:0070013,GO:0070035,GO:0071042,GO:0071047,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1990120,GO:1990904
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0331@2759
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko03041
Ec32 ortholog descriptionethylene-responsive DEAD box RNA helicase, putative (RH30)
Ec32 orthologEc-26_003500.1
Exons1
Model size522
Cds size522
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815641.0705528-CDS-L-elsbetiae_contig15630:1204..17261622815641.0705528-CDS-L-elsbetiae_contig15630:1204..1726Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15630 1205..1726 -
1691683008.6843712-CDS-L-elsbetiae_contig15630:1204..17261691683008.6843712-CDS-L-elsbetiae_contig15630:1204..1726Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15630 1205..1726 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15630.3945.1prot_L-elsbetiae_contig15630.3945.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig15630 1205..1726 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig15630.3945.1

>prot_L-elsbetiae_contig15630.3945.1 ID=prot_L-elsbetiae_contig15630.3945.1|Name=mRNA_L-elsbetiae_contig15630.3945.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=174bp
LFTQVTVGSLELAANKDIKQIIECTEDFNKYRSLSKHLQEHGHVGKVLVF
VETKKGCDALTRSLRQDGYQARCIHGDKSQEERDFVLKDFKGGNFQVLVA
TDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGIAVSFFGS
KNSRNCRELMKILKESDNIVPPEL
back to top

mRNA from alignment at L-elsbetiae_contig15630:1205..1726-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig15630.3945.1 ID=mRNA_L-elsbetiae_contig15630.3945.1|Name=mRNA_L-elsbetiae_contig15630.3945.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=522bp|location=Sequence derived from alignment at L-elsbetiae_contig15630:1205..1726- (Laminarionema elsbetiae ELsaHSoW15)
CTTTTTACCCAGGTGACGGTGGGATCCCTGGAGCTGGCGGCAAACAAGGA
TATCAAGCAGATCATCGAGTGCACGGAGGACTTCAACAAGTACCGCAGCC
TCAGCAAGCACCTGCAGGAGCACGGCCACGTCGGCAAGGTGCTCGTGTTC
GTGGAGACGAAGAAGGGGTGTGACGCCCTCACGAGGTCGCTCCGACAGGA
TGGGTACCAGGCGCGCTGCATCCACGGCGACAAGTCGCAGGAGGAGCGCG
ATTTCGTGCTGAAGGACTTCAAGGGCGGCAACTTCCAGGTGCTCGTCGCC
ACCGACGTGGCCGCCCGCGGGCTCGACGTGAAGGACATCCAGATGGTGAT
CAACTTCGACTTCCCCAACAACATGGAGGACTACATCCACCGCATCGGGC
GGTGCGGCCGCGCGGGCGCCAAGGGCATCGCCGTCAGCTTCTTCGGCTCC
AAGAACTCCCGCAACTGCCGCGAGCTCATGAAGATCCTCAAGGAGTCGGA
CAACATCGTGCCGCCCGAGTTG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig15630:1205..1726-

>mRNA_L-elsbetiae_contig15630.3945.1 ID=mRNA_L-elsbetiae_contig15630.3945.1|Name=mRNA_L-elsbetiae_contig15630.3945.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1044bp|location=Sequence derived from alignment at L-elsbetiae_contig15630:1205..1726- (Laminarionema elsbetiae ELsaHSoW15)
CTTTTTACCCAGGTGACGGTGGGATCCCTGGAGCTGGCGGCAAACAAGGA
TATCAAGCAGATCATCGAGTGCACGGAGGACTTCAACAAGTACCGCAGCC
TCAGCAAGCACCTGCAGGAGCACGGCCACGTCGGCAAGGTGCTCGTGTTC
GTGGAGACGAAGAAGGGGTGTGACGCCCTCACGAGGTCGCTCCGACAGGA
TGGGTACCAGGCGCGCTGCATCCACGGCGACAAGTCGCAGGAGGAGCGCG
ATTTCGTGCTGAAGGACTTCAAGGGCGGCAACTTCCAGGTGCTCGTCGCC
ACCGACGTGGCCGCCCGCGGGCTCGACGTGAAGGACATCCAGATGGTGAT
CAACTTCGACTTCCCCAACAACATGGAGGACTACATCCACCGCATCGGGC
GGTGCGGCCGCGCGGGCGCCAAGGGCATCGCCGTCAGCTTCTTCGGCTCC
AAGAACTCCCGCAACTGCCGCGAGCTCATGAAGATCCTCAAGGAGTCGGA
CAACATCGTGCCGCCCGAGTTGCTTTTTACCCAGGTGACGGTGGGATCCC
TGGAGCTGGCGGCAAACAAGGATATCAAGCAGATCATCGAGTGCACGGAG
GACTTCAACAAGTACCGCAGCCTCAGCAAGCACCTGCAGGAGCACGGCCA
CGTCGGCAAGGTGCTCGTGTTCGTGGAGACGAAGAAGGGGTGTGACGCCC
TCACGAGGTCGCTCCGACAGGATGGGTACCAGGCGCGCTGCATCCACGGC
GACAAGTCGCAGGAGGAGCGCGATTTCGTGCTGAAGGACTTCAAGGGCGG
CAACTTCCAGGTGCTCGTCGCCACCGACGTGGCCGCCCGCGGGCTCGACG
TGAAGGACATCCAGATGGTGATCAACTTCGACTTCCCCAACAACATGGAG
GACTACATCCACCGCATCGGGCGGTGCGGCCGCGCGGGCGCCAAGGGCAT
CGCCGTCAGCTTCTTCGGCTCCAAGAACTCCCGCAACTGCCGCGAGCTCA
TGAAGATCCTCAAGGAGTCGGACAACATCGTGCCGCCCGAGTTG
back to top