mRNA_L-elsbetiae_contig1563.3943.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1563.3943.1 vs. uniprot
Match: D7FZF8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF8_ECTSI) HSP 1 Score: 607 bits (1566), Expect = 3.890e-205 Identity = 355/563 (63.06%), Postives = 417/563 (74.07%), Query Frame = 1 Query: 1 GDGG-ATAAVAAVGA-ALALALAARSAAATDAA--------------ISCTPMDLNTFNVSDYIRWSNSSNRLYLENGACVTMTDIYESRMDGTGNKGPLFPFDEATKQTTDVVTGSWYLSSDLYIEDGSRLVVQGECRGGDCDHLLLASSPGAAPINLRAHGGQILLYATHVESWDMAAGGVHEDYEGGRSYISAISEVIYDERVTCLERPKNDMGESRLDIIESEVNHLGYDAAESYGIAYKVRGFCKDLSNAEIFDAVSVTGDIIESDIHHNYFGHYSYGHQGGNWSYNEVHHNIGYGLDPHDDSDHLTIHNNHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQINDADQRIGNGIMLHRSSNAAVVKNNTVHGNFDSGVALYESFDCLISDNTIYDNKNGIRMSLGSSDNLVWNNKMMIHGPESKYLIYMYQGSDIPDASLNRTTGRPSNNHIFDNTLISDDQVAKMKNADDNVIEGNVIYGRFSHFEDSKNTRWEGNFLADGMHQFKMSGGSCHHPDSDMDLPEEYQ--AAETEESHYSYAFDYG-----NSDGFFCA 1620 G GG ATAA AA+GA AL A+A RSA+A + CT MDL N++DYIRWSN S+RLYLENGACVT+TDIYESR+D TGNKGPL+PFDE T +D VTGSWYL S LYI +GSRLVVQG +GGDCDHLLLASSP INLRAHGG+++L THVESWD+AAG V E+ E GRSY+SAISEVI D TC KNDMGE+R+DII+SEVNHLG+ +ESYGIAYKVRGFCKDLSN E+FD+VSVTGDI+ SDIH NYFGHYSYGHQGGNWS+N++HHNIGYG DPHDDSD++TIHNN VXXXXXXXXXXXXXXXXXXXXXXXXXXX IN+A QR GN DSGVALYES C +SDN IY NKNGIRMSLGSSDNL++ N ++I+GP++KY IY+YQG+DIPD S GRP NNHIFDN+L+SD++V KM N+DD EGNV+YGR S F+DS NT W+ NF+ DG+H +K+ SC P+SD++ P+ Y+ AA EE +Y + GFFCA Sbjct: 2 GSGGVATAAAAALGAVALXXAMAGRSASAAETTSXXXXXXXXXXXXXXDCTSMDLVNHNITDYIRWSNMSDRLYLENGACVTLTDIYESRLDDTGNKGPLYPFDETTLDISDTVTGSWYLESTLYITEGSRLVVQGLSKGGDCDHLLLASSPEKF-INLRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPAETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVS----DGRPRNNHIFDNSLVSDNEVVKMLNSDDTAFEGNVVYGRVSRFKDSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIEEPDTYEDVAAMEEEEATTYXXXXXXXXXVSESGFFCA 559
BLAST of mRNA_L-elsbetiae_contig1563.3943.1 vs. uniprot
Match: D7FZF9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZF9_ECTSI) HSP 1 Score: 545 bits (1403), Expect = 8.700e-181 Identity = 307/490 (62.65%), Postives = 373/490 (76.12%), Query Frame = 1 Query: 67 RSAAATDAAISCTPMDLNTFNVSDYIRWSNSSNRLYLENGACVTMTDIYESRMDG-TG-NKGPLFPFDEATKQTTDVVTGSWYLSSDLYIEDGSRLVVQGECRGGDCDHLLLASSPGAAPINLRAHGGQILLYATHVESWDMAAGGVHEDYEGGRSYISAISEVIYDERVTCLERPKNDMGESRLDIIESEVNHLGYDAAESYGIAYKVRGFCKDLSNAEIFDAVSVTGDIIESDIHHNYFGHYSYGHQGGNWSYNEVHHNIGYGLDPHDDSDHLTIHNNHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQINDADQRIGNGIMLHRSSNAAVVKNNTVHGNFDSGVALYESFDCLISDNTIYDNKNGIRMSLGSSDNLVWNNKMMIHGPESKYLIYMYQGSDIPDASLNRTTGRPSNNHIFDNTLISDDQVAKMKNADDNVIEGNVIYGRFSHFEDSKNTRWEGNFLADGMHQFKMSGGSCHHPDSDMD 1530 RSAAAT A +C PMDL N++DYIRWS S+RLYLENGAC TMTDIYESR+D TG NKGP++PFDE T T+ VTGSWYL S LY+ +G+RLVVQG +GGDCDHLLLASS IN+RA+GG+I+L THVESWD+ G V E+Y+ GRSY+SAISEVI + + C NDMGE+R+DII+SE+NHLG+ +ESYGIAYKVRGFC DLSN E+F+ V VTGDI+ S IHH YFGHYSYGHQGGNWSYN VH N+GYG DPHDDSD++TI NN XXXXXXXXXXXXXXXXXXXXXXXXXXX + DA + GNGIMLH N V N DSGVA+YES +C IS N + NKNGIRMS+GS++NL + N ++I+G + +Y IY+Y+G+D P ++ + GRP NN +FDN+L+SD+ V +NADDN+IEGN I+GR S F DS NT W GN + D +H+FK+ GSC P+SDMD Sbjct: 30 RSAAATTVATNCPPMDLVNHNITDYIRWSTMSDRLYLENGACATMTDIYESRIDTYTGENKGPVYPFDETTGGITNNVTGSWYLGSSLYVTEGARLVVQGLSKGGDCDHLLLASSAEKF-INVRAYGGEIMLDGTHVESWDLLEGTVDENYDDGRSYLSAISEVIINPAMECEGMATNDMGEARMDIIDSEINHLGHYESESYGIAYKVRGFCNDLSNPELFETVGVTGDILGSHIHHLYFGHYSYGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVTDAGKITGNGIMLHXXXXXXXXXXNVVENNMDSGVAVYESSNCEISQNNLSRNKNGIRMSMGSANNLAFENHIVINGEDERYAIYLYRGNDTP--AVEGSDGRPRNNRVFDNSLMSDNAVVMARNADDNIIEGNTIFGRESRFVDSFNTLWYGNSVPD-VHEFKLEDGSCFDPESDMD 515
BLAST of mRNA_L-elsbetiae_contig1563.3943.1 vs. uniprot
Match: A0A6H5KBD3_9PHAE (MEP17 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD3_9PHAE) HSP 1 Score: 543 bits (1399), Expect = 2.070e-180 Identity = 314/508 (61.81%), Postives = 371/508 (73.03%), Query Frame = 1 Query: 172 YLENGACVTMTDIYESRMDGTGNKGPLFPFDEATKQTTDVVTGSWYLSSDLYIEDGSRLVVQGECRGGDCDHLLLASSPGAAPINLRAHGGQILLYATHVESWDMAAGGVHEDYEGGRSYISAISEVIYDERVTCLERPKNDMGESRLDIIESEVNH--------------------LGYDAAESYGIAYKVRGFCKDLSNAEIFDAVSVTGDIIESDIHHNYFGHYSYGHQGGNWSYNEVHHNIGYGLDPHDDSDHLTIHNNHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQINDADQRIGNGIMLHRSSNAAVVKNNTVHGNFDSGVALYESFDCLISDNTIYDNKNGIRMSLGSSDNLVWNNKMMIHGPESKYLIYMYQGSDIPDASLNRTTGRPSNNHIFDNTLISDDQVAKMKNADDNVIEGNVIYGRFSHFEDSKNTRWEGNFLADGMHQFKMSGGSCHHPDSDMDLPEEYQ--AAETEESHYSYA----FDYGNSDGFFC 1617 YLENGACVT+TDIYESR D +GNKGPL+PFDE +D VTGSWYL S LYI +GSRLVVQG +GGDCDHLLLASSP IN+RAHGG+++L THVESWD+AAG V E+ E GRSY+SAISEVI D TC KNDMGE+R+DII+SEVN LG+ +ESYGI+YKVRGFC DLSN E+FD+VSVTGDI+ SDIH NYFGHYSYGHQGGNWS+N++HHNIGYG DPHDDSD+LTIHNN V XXXXXXXXXXXXXXXXXXXXXXXXXX IN+A QR GN DSGVALYES C +SDN IY +KNGIRMSLGSSDNL++ N ++I+GP++KY IY+YQG+DIPD S GR NNHIFDN+L+SD+QV KM N+DD EGNV+YGR S F++S NT W+ NF+ DG+H +K+ SC P+SD++ P+ Y+ AA EE +Y+ FD S GFFC Sbjct: 35 YLENGACVTLTDIYESRSDDSGNKGPLYPFDETALDISDTVTGSWYLESSLYITEGSRLVVQGLSKGGDCDHLLLASSPEKF-INVRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNRTTQTSHSAPLTSRLPQYKTDLGWYDSESYGISYKVRGFCTDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYLTIHNNEVYXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGSKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVS----DGRLRNNHIFDNSLVSDNQVVKMLNSDDTAFEGNVVYGRVSRFKNSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIEEPDTYEDVAAMEEEEATTYSXXXXFDVSES-GFFC 536
BLAST of mRNA_L-elsbetiae_contig1563.3943.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 335 bits (860), Expect = 5.050e-101 Identity = 201/473 (42.49%), Postives = 269/473 (56.87%), Query Frame = 1 Query: 142 IRWSNSSNRLYLEN------GACVTMTDIYESRMDGTGNKGPLFPFDEATKQTTDVVTGSWYLSSDLYIEDGSRLVVQGECRGGDCDHLLLASSPGAAPINLRAHGGQILLYATHVESWDMAAGGVHEDYEGGRSYISAISEVIYDERVTCLERPKNDMGESRLDIIESEVNHLGYDAAESYGIAYKVRGFCKDLSNAEIFDAVSVTGDIIESDIHHNYFGHYSYGHQGGNWSYNEVHHNIGYGLDPHDDSDHLTIHNNHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQINDADQRIGNGIMLHRSSNAAVVKNNTVHGNFDSGVALYESFDCLISDNTIYDNKNGIRMSLGSSDNLVWNNKMMIHGPESKYLIYMYQGSDIPDASLNRTTGRPSNNHIFDNTLISDDQVAKMKNAD-----DNVIEGNVIYGRFSHFEDSKNTRWEGNF-LADGMHQFKMSGGSCHHPDSD 1524 IR++ ++ RLYLE+ G C T+ I+ESR K PL+ D + ++ TG+W L+ +LY+EDG L V G GGD D L L S+ INLRAHGG + T V SWD + ED GRSYISA+SE++ DE TC KN MGE+R+DI SE+ +LG+ +ESYG+ +KVRGFCKD SN EIFD V+V G++ +SDIHH FG Y+YGHQ G+W N++H N GYG DPHDDSD LTIH+N V + + GI LHRSS+ A+VK N VH N D+G+A+ ESF+ +S+NT +NK G+RMS+G +DN+ N I SKY Y Y GSD PD ++GR NN N+ ++ K+K AD DNV E G F+D+ N+ +GN L +G + K++ SC +SD Sbjct: 51 IRYAGTTKRLYLESADGETRGGCATLGQIWESR----AGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLST-SETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSA-------GIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSEN---IISNNSKYNAYTYLGSDEPDVV---SSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESD 505
BLAST of mRNA_L-elsbetiae_contig1563.3943.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 328 bits (840), Expect = 3.540e-98 Identity = 197/474 (41.56%), Postives = 268/474 (56.54%), Query Frame = 1 Query: 142 IRWSNSSNRLYLEN-------GACVTMTDIYESRMDGTGNKGPLFPFDEATKQTTDVVTGSWYLSSDLYIEDGSRLVVQGECRGGDCDHLLLASSPGAAPINLRAHGGQILLYATHVESWDMAAGGVHEDYEGGRSYISAISEVIYDERVTCLERPKNDMGESRLDIIESEVNHLGYDAAESYGIAYKVRGFCKDLSNAEIFDAVSVTGDIIESDIHHNYFGHYSYGHQGGNWSYNEVHHNIGYGLDPHDDSDHLTIHNNHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQINDADQRIGNGIMLHRSSNAAVVKNNTVHGNFDSGVALYESFDCLISDNTIYDNKNGIRMSLGSSDNLVWNNKMMIHGPESKYLIYMYQGSDIPDASLNRTTGRPSNNHIFDNTLISDDQVAKMKNAD-----DNVIEGNVIYGRFSHFEDSKNTRWEGNF-LADGMHQFKMSGGSCHHPDSD 1524 IR++ ++ RLYLE+ G CVT+ I+ESR KGPL+ D + + TG+W L+ +LY+EDG L V G GGD D L L S+ INLRAHGG + +T V SWD + ED GRSYISAISE+I DE TC KN MGE+R+DI SE+ +LGY +ESYG+ +KVRGFC+D SN E+FD V+V G++ +SDIHH FG Y+YGHQ G+W N++H N GYG DPHDDSD LTIH+N V + + GI LHRSS+ A+VK N VH N D+G+A+ ESF+ +S+NT +NK G+R S+G +DN+ NN + ++Y Y Y G+D PD ++GR NN N+ ++ K+K AD DNV E G F+++ +GN L DG + K+ +C ++D Sbjct: 46 IRYAGTTARLYLESADNGTTRGGCVTLGQIWESR----AGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLST-NETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSA-------GIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTI---SNNAEYNAYSYLGTDEPDVV---SSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEAD 501
BLAST of mRNA_L-elsbetiae_contig1563.3943.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI) HSP 1 Score: 323 bits (827), Expect = 2.940e-95 Identity = 193/436 (44.27%), Postives = 246/436 (56.42%), Query Frame = 1 Query: 142 IRWSNSSNRLYLE------NGACVTMTDIYESRMDGT--GNKGPLFPFDEATKQTTDVVTGSWYLSSDLYIEDGSRLVVQGECRGGDCDHLLLASSP------GAAPINLRAHGGQILLYATHVESWDMAAGGVHEDYEGGRSYISAISEVIYDERVTCLERPKNDMGESRLDIIESEVNHLGYDAAESYGIAYKVRGFCKDLSNAEIFDAVSVTGDIIESDIHHNYFGHYSYGHQGGNWSYNEVHHNIGYGLDPHDDSDHLTIHNNHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQINDADQRIGNGIMLHRSSNAAVVKNNTVHGNFDSGVALYESFDCLISDNTIYDNKNGIRMSLGSSDNLVWNNKMMIHGPESKYLIYMYQGSDIPDASLNRTTGRPSNNHIFDNTLISDDQVAKMKNADDNVIEGNVIY 1407 IR+S ++ RLYLE G CVT+ I+E+R GT G K PL+ D + + +DV+TG+W L DLY+EDG L V G GG D L L S+P INLRAHGG + T V WD D GRSYISA+SE++ D TC KN MGE+R+DI+ SE+ ++G+ +ESYG+ +KVRGFCKD SN E+FD V+V G+I +S++HH F Y+YGHQ G+W N VH N GYG DPHDDSD LTIH+N V ND GI LHRSS+ AVVK+N +GN D+G+A+ ES + IS N NK GIRMS+G DN V NN M S+Y IY YQGSD + + TGR +N NT++ Q K+K +D I NV Y Sbjct: 123 IRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGG---NDTSA----GIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMT---NTSQYAIYTYQGSDPAEV---QPTGRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFY 545
BLAST of mRNA_L-elsbetiae_contig1563.3943.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE) HSP 1 Score: 317 bits (811), Expect = 4.600e-94 Identity = 219/470 (46.60%), Postives = 293/470 (62.34%), Query Frame = 1 Query: 142 IRWSNSSNRLYLEN------GACVTMTDIYESRMDGTGNKGPLFPFDEATKQTTDVVTGSWYLSSDLYIEDGSRLVVQGECRGGDCDHLLLASSPGAAPINLRAHGGQILLYATHVESWDMAAGGVHEDYEGGRSYISAISEVIYDERVTCLERPKNDMGESRLDIIESEVNHLGYDAAESYGIAYKVRGFCKDLSNAEIFDAVSVTGDIIESDIHHNYFGHYSYGHQGGNWSYNEVHHNIGYGLDPHDDSDHLTIHNNHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQINDADQRIGNGIMLHRSSNAAVVKNNTVHGNFDSGVALYESFDCLISDNTIYDNKNGIRMSLGSSDNLVWNNKMMIHGPESKYLIYMYQGSDIPDASLNRTTGRPSNNHIFDNTLISDDQVAKMKNADDN-VIEGNVIYGRFSHFEDSKNTRWEGNFLADGMHQFKMSGGSCHHPDSDMD 1530 IR+S SS RLYLE+ G CVT+ +I++ +DG+ PL+ ++ + TG+W L+ DLY+EDG L V G GG+ + L L S+ INLRAHGG + +T V +WD + V D RSYISA+SE+I D + C + K MGE+R+DI +SE+ +LGY +ESYG+ +KVRGFCKD SN E+FD V+V G+I +SDIHHN+FG Y+YGH+ G+W N++HHN YG DPHDDSD LTIH+N VXXXXXXXXXXXXXXXXXXXXXXXXXX + GI LHRSS+ A+VK+N N D+G+AL ESF+ +S+N DNK G+R+S+G +DN+ N + SKY +Y Y+GSD P +GR +N DNT+ D+ K+ AD I+ + + FED++ T GN G K+S G+C SD D Sbjct: 47 IRYSASSKRLYLESADGKTRGGCVTLEEIWKD-LDGSA---PLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDF-INLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSV-------GIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKN---VISDSSKYNVYTYEGSDDPWVV---DSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGN-TGLGSATLKVSKGACFDKKSDSD 497
BLAST of mRNA_L-elsbetiae_contig1563.3943.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA) HSP 1 Score: 316 bits (810), Expect = 5.880e-94 Identity = 206/468 (44.02%), Postives = 273/468 (58.33%), Query Frame = 1 Query: 142 IRWSNSSNRLYLEN------GACVTMTDIYESRMDGTGNKGPLFPFDEATKQTTDVVTGSWYLSSDLYIEDGSRLVVQGECRGGDCDHLLLASSPGAAPINLRAHGGQILLYATHVESWDMAAGGVHEDYEGGRSYISAISEVIYDERVTCLERPKNDMGESRLDIIESEVNHLGYDAAESYGIAYKVRGFCKDLSNAEIFDAVSVTGDIIESDIHHNYFGHYSYGHQGGNWSYNEVHHNIGYGLDPHDDSDHLTIHNNHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQINDADQRIGNGIMLHRSSNAAVVKNNTVHGNFDSGVALYESFDCLISDNTIYDNKNGIRMSLGSSDNLVWNNKMMIHGPESKYLIYMYQGSDIPDASLNRTTGRPSNNHIFDNTLISDDQVAKMKNADDN-VIEGNVIYGRFSHFEDSKNTRWEGNFLADGMHQFKMSGGSCHHPDSD 1524 IR+S +S RLYLE+ G CVT+ DI+ +DG PL+ ++ + +TG+W L+ LY+EDG L V G+ GG D L L S+ INLRAHGG + +T V +WD + V D GRSYISA+SEVI D + C R K +MGE+R+DI +SE+ +LGY +ESYG+ +KVRG C+DLSN E+FDAV+V G+I +SDIHHNYFG Y+YGH+ G+W N++HHN YG DPHDDSD LTIH+N V XXXXXXXXXX A + +G I LHRSS+ A+VK+N VH N D+G+AL E+F+ +S+N DNK GIRMS+G +DN+ N + SKY +Y YQGSD P +GR + + K+ AD I+ + FED + T GN G K++ GSC SD Sbjct: 44 IRYSKTSKRLYLESADGNTRGGCVTLEDIWRD-LDGGA---PLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDF-INLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXG-----AAKSVG--IFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDIT---GSSKYNVYTYQGSDAPWVV---DSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSGLGGA-SLKVTDGSCFDKKSD 492
BLAST of mRNA_L-elsbetiae_contig1563.3943.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI) HSP 1 Score: 298 bits (763), Expect = 1.960e-88 Identity = 168/363 (46.28%), Postives = 219/363 (60.33%), Query Frame = 1 Query: 142 IRWSNSSNRLYLEN-------GACVTMTDIYESRMDGTGNKGPLFPFDEATKQTTDVVTGSWYLSSDLYIEDGSRLVVQGECRGGDCDHLLLASSPGAAPINLRAHGGQILLYATHVESWDMAAGGVHEDYEGGRSYISAISEVIYDERVTCLERPKNDMGESRLDIIESEVNHLGYDAAESYGIAYKVRGFCKDLSNAEIFDAVSVTGDIIESDIHHNYFGHYSYGHQGGNWSYNEVHHNIGYGLDPHDDSDHLTIHNNHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQINDADQRIGNGIMLHRSSNAAVVKNNTVHGNFDSGVALYESFDCLISDNTIYDNKNGIRMSLGSSDNLVWNN 1209 IR++ S+ RLYLE+ G CVT+ I+ESR KGPL+ D + + TG+W L+ +LY+EDG L V G GGD D L L S+ INLRAHGG + +T V SWD + ED GRSYISAISE+I DE TC KN MGE+R+DI SE+ +LGY +ESYG+ +KVRGFC+D SN E+FD V+V G++ +SDIHH FG Y+YGHQ G+W N++H N GYG DPHDDSD LTIH+N V + + GI LHRSS+ A+VK N VH N D+G+A+ ESF+ +S+NT +NK G+R S+G +DN+ NN Sbjct: 46 IRYAESTARLYLESADNGTTRGGCVTLGQIWESR----AGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLST-NETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSA-------GIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNN 396
BLAST of mRNA_L-elsbetiae_contig1563.3943.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 299 bits (766), Expect = 5.880e-88 Identity = 185/469 (39.45%), Postives = 261/469 (55.65%), Query Frame = 1 Query: 142 IRWSNSSNRLYLEN------GACVTMTDIYESRMDGTGNKGPLFPFDEATKQTTDVVTGSWYLSSDLYIEDGSRLVVQGECRGGDCDHLLLASSPGAAPINLRAHGGQILLYATHVESWDMAAGGVHEDYEGGRSYISAISEVIYDERVTCLERPKNDMGESRLDIIESEVNHLGYDAAESYGIAYKVRGFCKDLSNAEIFDAVSVTGDIIESDIHHNYFGHYSYGHQGGNWSYNEVHHNIGYGLDPHDDSDHLTIHNNHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQINDADQRIGNGIMLHRSSNAAVVKNNTVHGNFDSGVALYESFDCLISDNTIYDNKNGIRMSLGSSDNLVWNNKMMIHGPESKYLIYMYQGSDIPDASLNRTTGRPSNNHIFDNTLISDDQVAKMKNADDNVIEGNVIYGRFS-HFEDSKNTRWEGNF-LADGMHQFKMSGGSCHHPDSD 1524 +R++ S RLY+E+ G CVT+ I+E ++DG+ PL+ D + + TG+W L+ ++Y+EDG L V G GGD D L L S+ I+LRA+GG + +T V +WD + +D GRSYISA+SEVI D+R TC R KN+MGE+R+DI SE+ +LGY E+YG+ +KVRGFC D N E+FD V+V G+I +SDIHHN FG Y+YGHQ G+W N++H N GYG DPHDDSD LTIH+N V + GI LHRSS+ +VK N VH N D+G+A+ ESF+ +SDNT +NK G+R+S+G N+ +K +I G +++ + Y G+D P+ +GR +N +N +I + +K AD N + F D+ T GN LAD K+ G+ SD Sbjct: 18 VRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGS----PLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTF-IHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSA-------GIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIF--SKNVITG-SAEFNTFSYLGADKPEVV---DSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNTGLADST--LKVDRGATFDESSD 466 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1563.3943.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1563.3943.1 >prot_L-elsbetiae_contig1563.3943.1 ID=prot_L-elsbetiae_contig1563.3943.1|Name=mRNA_L-elsbetiae_contig1563.3943.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=511bp MDLNTFNVSDYIRWSNSSNRLYLENGACVTMTDIYESRMDGTGNKGPLFPback to top mRNA from alignment at L-elsbetiae_contig1563:11685..16894+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1563.3943.1 ID=mRNA_L-elsbetiae_contig1563.3943.1|Name=mRNA_L-elsbetiae_contig1563.3943.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5210bp|location=Sequence derived from alignment at L-elsbetiae_contig1563:11685..16894+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1563:11685..16894+ >mRNA_L-elsbetiae_contig1563.3943.1 ID=mRNA_L-elsbetiae_contig1563.3943.1|Name=mRNA_L-elsbetiae_contig1563.3943.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3066bp|location=Sequence derived from alignment at L-elsbetiae_contig1563:11685..16894+ (Laminarionema elsbetiae ELsaHSoW15)back to top |