mRNA_L-elsbetiae_contig1562.3937.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1562.3937.1 vs. uniprot
Match: A0A6H5JIG6_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG6_9PHAE) HSP 1 Score: 605 bits (1561), Expect = 9.240e-199 Identity = 403/836 (48.21%), Postives = 498/836 (59.57%), Query Frame = 3 Query: 3 GCNSRVFRAAFRRQPQHNCSLSDDTAKGISLKDARPASMATPSSHAAVSVGAAKGRRYNETPARQRR---SVAGDFIGLGEQVWKGGFGACFSGDHARAQEGGGEAREAPRSSKPRECPGGAEWALKMALTYAGQDPLQAARDMETEIDILVGGRISPHANIMRGVHSFQDEIGKDLQPTLWAGLGPEAGQMLSSRTFFVVMPLFTAGSLQALLNKRQRRCRGPPFLRLLETMRFVEQMLSAVSHLLEHGVAHNDIKPDNWLLRADQRTLVLTDFGAAVDSLRPKRPMF---SSSPAAPIPQFGATAAAAPATCPEKASFAGLTSSPCRPAGAASIXXXXXXXXXXXXXAGKSGDAD------KELFLASSTARCQPTAKRGLSVSEHFGLTGNMSSGIDD----------EDVSAASPARKRRRHFADEESGGGRLDQQGRDKPRVPS--------TGLSDNLVFPFSKYCVAGTPSIIAPELARAWREETNLDFRQSDVFSVGVCMYRMLRPGTVDIDNGTGLEGKGPLEKIEGWFGQHAWPLPLFPDAKGGCPYEVSQLCRGLLQPDPSKRHGASEGQSIVSWFVSRLETADRQGANESIAAATSRSSCKTSGP------PMASCETGDAH---MRAGGASVGRRERNG----------SAIGPVD-------IAIRSLPLGG----------IQVFKECGADARKGKWEDGGCPERASLSLDAAARRTTSEERRHLEEPDELVRSDRISHMRDFFTSAAPDDLFRALDTKGWDVAAACAVFDDGTSGEGGGKSALDIERMCVPEEYKQRASTQGSRLKLWFDGVAEELKGRR 2312 G NSRVFR R + + S A G +A P+S+A+PS + P+ S+ D +G+ EQ+ KG FGAC SG++ ++G A+ + K + P EWALKM LT A +DPLQA R+M+TEID+LVGGRI PH NIMRGVHSFQD IG++LQP LW GL P AG LS T F+VMPLFTAGSLQALLNKR+ RC+GPPFLRLLETMRF++QMLSA+SHLL HGVAHNDIKPDNWLL ADQRTLVLTDFGA DS P +P SSSPA P+P GA+AA + AT E+ + G S+PCR +GA XXXXXXXXXXX S D E + T R +P S FG G+ + V +++RR + D+E RDK R+ S T +SD +V PFS YCVAG P+I+APELARAW EET L+F +SDVFSVG+CMYRMLRP +V IDNGTGLE K PLEK +G Q AWPLP+FP+ KGGCP+EVSQLCRGLL DP KR A EGQSI S +VSRLE AD +G + + ++ S S P P A+ TG+ H RA A + ER G +A+ P+ +A P GG + +F+ G + E GG E A+ + AAA R++SEER+ E DELV+SDRIS MR+ F +AAPD+LF+ALDT+ WDVAAACAVF D TSG+ + LD+ R P AS SR L+F GVA+EL+G R Sbjct: 77 GVNSRVFRVRLRSRRHDHASRG--RADGA---NAHPSSVASPSLPSXXXXXXXXXXXXXXXPSSTSPPSGSLVKDLMGMCEQLRKGSFGACLSGNYGSVEQGAANAKRSAVPDKAEDKPADTEWALKMVLTLAAKDPLQAEREMKTEIDVLVGGRIPPHPNIMRGVHSFQDTIGRELQPRLWDGLEPNAGGTLSPHTTFLVMPLFTAGSLQALLNKRRLRCKGPPFLRLLETMRFLKQMLSAISHLLAHGVAHNDIKPDNWLLCADQRTLVLTDFGACFDSSNPPQPRSKPSSSSPAVPVPCLGASAAVS-ATDLEQTAVTGRGSNPCRSSGAVGSTAXXXXXXXXXXXXXXSNGTDLSGAGAAEPLANAVTGRKRPMEAGNFVPSRDFGSANRKHLGVSSMPSCDTGTNADSVPGPQDSKRRRLGYRDQE----------RDKVRICSATGTVCSTTEVSDKMVIPFSNYCVAGAPNILAPELARAWEEETPLNFTRSDVFSVGLCMYRMLRPDSVIIDNGTGLEVKDPLEKTKGLTNQEAWPLPIFPENKGGCPFEVSQLCRGLLLADPCKRLAAFEGQSIASNYVSRLEDADGKGQDAMERSVSASGSAGASRPRYQFESPRAT-GTGEIHGRETRADNALARKHERLGFVENPKSGHFAAVPPIKSHSAVDGMAPPPSPAGGPSNDSCRRDRMLLFRGAG----RINCERGGA-EGATSNGAAAAGRSSSEERQLPREVDELVKSDRISQMREIFANAAPDNLFKALDTEDWDVAAACAVFGDSTSGDS--RPKLDVARASAPG-----ASATESRSGLFFGGVAQELRGLR 883
BLAST of mRNA_L-elsbetiae_contig1562.3937.1 vs. uniprot
Match: D7G480_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G480_ECTSI) HSP 1 Score: 299 bits (765), Expect = 1.050e-87 Identity = 204/443 (46.05%), Postives = 258/443 (58.24%), Query Frame = 3 Query: 1095 PTAKRGLSVSEHFGLTGNMS--SGIDDEDVSAASPARKRRRHFADEESGGGRLDQQGRDKPRVPSTG-LSDNLVFPFSKYCVAGTPSIIAPELARAWREETNLDFRQSDVFSVGVCMYRMLRPGTVDIDNGTGLEGKGPLEKIEGWFGQHAWPLPLFPDAKGGCPYEVSQLCRGLLQPDPSKRHGASEGQSIVSWFVSRLETADRQG---------ANESIAAATSRSSCKTSGPPMASCETGDAH---MRAGGASVGRRERNGS----------AIGPVD-------IAIRSLPLGGIQVFKECGAD-------ARKGKWEDGGCPERASLSLDAAARRTTSEERRHLEEPDELVRSDRISHMRDFFTSAAPDDLFRALDTKGWDVAAACAVFDDGTSGEGGGKSALDIERMCVPEEYKQRASTQGSRLKLWFDGVAEELKG 2306 P G + + G+TG S +G + V +++ R + D+E GR+ G V ST +S +V PFS YCVAG P+ +APELARAW EET L+F++SDVFSVG+CMYRMLRP +V IDNGTGLE K PLEK +G Q AWPLP+FP+ KGGCP+EVSQLCRGLL DP KR ASEGQSI S +VSRLE AD +G A+ A+ +R ++ P +TG+ H RA A + E GS A+ P+ +A P GG + C D A + E GG AS AAA R++SEE++ E DELV+SDRIS MR+ F SAAP++LF+ALDTK WDVAAACAVF D TSG+ + LD+ R VP AS GSR L+F GVA+EL+G Sbjct: 8 PRRDFGSANRKRLGVTGMPSCDTGTHADSVPGPQDSKRHRLGYGDQERDNGRI---GSTTGTVCSTAKVSYEMVIPFSNYCVAGAPNTLAPELARAWEEETPLNFKRSDVFSVGLCMYRMLRPDSVIIDNGTGLEEKDPLEKTKGLTNQEAWPLPIFPENKGGCPFEVSQLCRGLLLADPYKRLAASEGQSIASNYVSRLEDADGKGQDAMQRSASASXXXGASRTRYQFESQRPT----DTGEIHGRETRADHALARKHEGLGSVKNPKRGHSAAVPPIKSHSAVHGMAPPPSPAGG-PLNDGCRRDRMLLFRGAGRINGERGGAEGAASNGA-AAAGRSSSEEKQLPTEVDELVKSDRISQMREIFASAAPENLFKALDTKDWDVAAACAVFGDSTSGDS--RPKLDVARASVPG-----ASATGSRSGLFFGGVAQELRG 434
BLAST of mRNA_L-elsbetiae_contig1562.3937.1 vs. uniprot
Match: A0A2V8RE67_9BACT (Non-specific serine/threonine protein kinase n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8RE67_9BACT) HSP 1 Score: 63.9 bits (154), Expect = 1.180e-6 Identity = 40/117 (34.19%), Postives = 64/117 (54.70%), Query Frame = 3 Query: 489 VHSFQDE---IGKDLQPTLWAGLGPEAGQMLSSRTF-FVVMPLFTAGSLQALLNKRQRRCRGPPFLRLLETMRFVEQMLSAVSHLLEHGVAHNDIKPDNWLLRADQRTLVLTDFGAA 827 + +F++E + + P + + LG L RTF ++V+ G LQAL+ +R L L + + ++ Q+ + +++ +HGV H DIKP N LL ADQRTL + DFG A Sbjct: 67 IENFRNEAVALDRVRHPNIISRLGHGTAIDLQGRTFHYLVLEYLPGGDLQALVLRRP--------LPLDDALFYLGQVCAGLAYAHQHGVIHRDIKPQNLLLTADQRTLKIADFGVA 175
BLAST of mRNA_L-elsbetiae_contig1562.3937.1 vs. uniprot
Match: A0A401SFA0_CHIPU (Protein kinase domain-containing protein n=3 Tax=Chiloscyllium TaxID=34767 RepID=A0A401SFA0_CHIPU) HSP 1 Score: 60.5 bits (145), Expect = 1.580e-5 Identity = 53/153 (34.64%), Postives = 71/153 (46.41%), Query Frame = 3 Query: 450 GGRISPHANIMRGVHSFQDEIGKDLQPTLWAGLGPEAGQMLS------SRTFFVVM---PLFTAGSLQALLNKRQRRCRGPPFLRLLETMRFVEQMLSAVSHLLEHGVAHNDIKPDNWLLRADQR---TLVLTDFGA--AVDSLRPKRPMFSS 866 G +I PH NI++ V +F D + L P W L+ SRT F+VM P LQ + +Q C L+LLE V HL++HG+AH D+K DN L+ D LV+TDFG A +SL K P S+ Sbjct: 308 GKKIKPHPNIIQIVRAFVDNV--PLLPGAWLEYPDVLPTRLNPHGLGHSRTLFLVMKSYPCTLQQYLQVCIPNKQ--CATVMILQLLE----------GVDHLVQHGIAHRDLKSDNILVEFDSGGCPRLVITDFGCCLAEESLGLKLPFTSN 446
BLAST of mRNA_L-elsbetiae_contig1562.3937.1 vs. uniprot
Match: UPI0009E2E91F (uncharacterized protein LOC110069677 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E2E91F) HSP 1 Score: 59.7 bits (143), Expect = 3.380e-5 Identity = 32/79 (40.51%), Postives = 43/79 (54.43%), Query Frame = 3 Query: 591 VVMPLFTAGSLQALLNKRQRRCRGPPFLRLLETMRFVEQMLSAVSHLLEHGVAHNDIKPDNWLLRADQRTLVLTDFGAA 827 +VM G+L+ LL+K Q R +G F T+RF E + SA+ HL + H D+KP+N L D L L DFG A Sbjct: 762 IVMEFMAGGNLKVLLDKNQGRGQGKKF-----TLRFTEDIGSALEHLHSLNIIHRDVKPENIFLSVDHTVLKLGDFGLA 835
BLAST of mRNA_L-elsbetiae_contig1562.3937.1 vs. uniprot
Match: K7FC75_PELSI (Non-specific serine/threonine protein kinase n=1 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7FC75_PELSI) HSP 1 Score: 58.5 bits (140), Expect = 3.600e-5 Identity = 43/134 (32.09%), Postives = 66/134 (49.25%), Query Frame = 3 Query: 456 RISPHANIMRGVHSFQDEIGK------DLQPTLWAGLGPEAGQMLSSRTFFVVMPLFTAGSLQALLNKRQRRCRGPPFLRLLETMRFVEQMLSAVSHLLEHGVAHNDIKPDNWLLRADQRT---LVLTDFGAAV 830 ++ PH NI++ + +F + D L + L P + SRT F+VM + +L+ L +R R L TM + Q+L V HL++HG+AH D+K DN L+ D LV+TDFG + Sbjct: 49 KLEPHPNIIQVIRAFTSSVPLLPGAYLDYPDVLPSSLNPSG--IGHSRTLFLVMKNYPC-TLRQYLRERTSDTR-------LSTM-MILQLLEGVDHLVQHGIAHRDLKSDNILVEFDSAGCPWLVITDFGCCL 171
BLAST of mRNA_L-elsbetiae_contig1562.3937.1 vs. uniprot
Match: A0A452R872_URSAM (Non-specific serine/threonine protein kinase n=3 Tax=Laurasiatheria TaxID=314145 RepID=A0A452R872_URSAM) HSP 1 Score: 58.9 bits (141), Expect = 4.630e-5 Identity = 46/134 (34.33%), Postives = 62/134 (46.27%), Query Frame = 3 Query: 456 RISPHANIMRGVHSFQDEIGK------DLQPTLWAGLGPEAGQMLSSRTFFVVMPLFTAGSLQALLNKRQRRCRGPPFLRLLETMRFVEQMLSAVSHLLEHGVAHNDIKPDNWLLRADQRT---LVLTDFGAAV 830 +++PH NI+R +F + D L L PE + RT F+VM + RQ C P RL M V Q+L AV HL++ GVAH D+K DN L+ D LV+TDFG + Sbjct: 288 QLAPHPNIIRVFRAFTSSVPLLPGALVDYPDVLPPRLHPEG--LGHGRTLFLVMKNYP-------YTLRQYLCENTPSPRLATVM--VLQLLEAVDHLVQQGVAHRDLKSDNILVELDADGCPWLVITDFGCCL 410 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1562.3937.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1562.3937.1 >prot_L-elsbetiae_contig1562.3937.1 ID=prot_L-elsbetiae_contig1562.3937.1|Name=mRNA_L-elsbetiae_contig1562.3937.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=741bp MATPSSHAAVSVGAAKGRRYNETPARQRRSVAGDFIGLGEQVWKGGFGACback to top mRNA from alignment at L-elsbetiae_contig1562:13133..19520- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1562.3937.1 ID=mRNA_L-elsbetiae_contig1562.3937.1|Name=mRNA_L-elsbetiae_contig1562.3937.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6388bp|location=Sequence derived from alignment at L-elsbetiae_contig1562:13133..19520- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1562:13133..19520- >mRNA_L-elsbetiae_contig1562.3937.1 ID=mRNA_L-elsbetiae_contig1562.3937.1|Name=mRNA_L-elsbetiae_contig1562.3937.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4446bp|location=Sequence derived from alignment at L-elsbetiae_contig1562:13133..19520- (Laminarionema elsbetiae ELsaHSoW15)back to top |