mRNA_L-elsbetiae_contig15517.3879.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15517.3879.1 vs. uniprot
Match: A0A6H5K6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K9_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 2.200e-12 Identity = 73/246 (29.67%), Postives = 104/246 (42.28%), Query Frame = -3 Query: 15 DIVNALVAKGAQVN--TVLQSNRQTPLHLACSRQGSSPSAASLPTVDTLLAAGANTDIKDKDGNTPLHLACKMSLEPAVRSLLRCDANEMMANQHGLV------------------------AKDMVCDPNKEAILEMLALAPADRAWRRRRWLVSRRSSALKKRLESANHCPAAEESEAGE--QPKQDDPITKKTRGDDAGEESGGNSGVGGVELDQERYDFDHLVGWVVDIAPEGIFELVVGFL 668 D V L+ GA V+ T N TPLH A +R+ A + + LL GAN + +D TPLH+AC S V LL A+E + + G KD + ++ I +MLA APADR+W RRRWLV RS K ++ + + +G+ + K GDD E DQ+ ++ LV +V + + +F LVVGFL Sbjct: 39 DTVRVLLEAGADVDAKTTGDGNCATPLHYAVNRR-----IAPIGAIRALLEGGANVNARDVFDQTPLHVACARSSVNGVEFLLHWGADEKLTDLDGETPAGAIVDSEEETPPDVTDAPGENRGKDEAIEADQHRIRQMLARAPADRSWHRRRWLVLSRSCPTKVQISNTSSSSNISSGSSGDGLSAEMVSVNCKDLGGDDKETE------------DQKTVNWRDLVVRLVGLEADVLFRLVVGFL 267
BLAST of mRNA_L-elsbetiae_contig15517.3879.1 vs. uniprot
Match: A0A6H5K513_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K513_9PHAE) HSP 1 Score: 63.5 bits (153), Expect = 1.380e-7 Identity = 59/184 (32.07%), Postives = 91/184 (49.46%), Query Frame = -3 Query: 15 LLAAGANTDIKDKDGNTPLHLACKM---SLEPAVRSLLRCDANEMMANQHGL--------VAKDMVCD-PNKEAILEMLALAPADRAWRRRRWLVSRRSSALKKRLESANHCPAAEESEAGEQPKQDDPITKKTRGDDAGEESGGNSGVGGVELDQERYDFDHLVGWVVDIAPEGIFELVVGFL 530 LL+ GA D K DG+T LHLA ++ V +LLR A+E +++ VA+++V + P + LE+LA APADRAWRRR WLV K+R + E+ +GE+ D ++ RG +A GG + + D +V +V + EG+F +VG++ Sbjct: 327 LLSRGARVDEKTDDGSTALHLAGHARGYKVDDTVDTLLRWGASEQAVDENDETPVDRLTEVAREVVWEWPELDRALELLARAPADRAWRRRGWLVMLHERTKKERHVRGDRPRKGEKVGSGEEVLLGD--GERGRGKNARRR-------GGAAV---KADLRGVVNVLVGLESEGVFRTIVGYV 498
BLAST of mRNA_L-elsbetiae_contig15517.3879.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI) HSP 1 Score: 62.4 bits (150), Expect = 3.220e-7 Identity = 44/110 (40.00%), Postives = 56/110 (50.91%), Query Frame = -3 Query: 264 LPTVDTLLAAGANTDIKDKDGNTPLHLAC---KMSLEPAVRSLLRCDANEMMANQHGLVAKDMVCDPNKE------------AILEMLALAPADRAWRRRRWLVSRRSSA 548 L + TLL GA+ +D +GNTPLH+AC LE V LLR A+E N G ++ + + E + +LA APADRAWRRR WLV RS A Sbjct: 319 LKAMHTLLWHGASLTAQDTEGNTPLHVACYRQHKGLEAPVDLLLRWGADETALNNAGKTPAGLLDEHDNENDRTTCSEAEINRVRMLLARAPADRAWRRRCWLVMLRSFA 428
BLAST of mRNA_L-elsbetiae_contig15517.3879.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 60.5 bits (145), Expect = 1.720e-6 Identity = 51/151 (33.77%), Postives = 75/151 (49.67%), Query Frame = -3 Query: 270 AYSWSDIVNALVAKGAQVNTVLQSNRQTPLHLACSRQGSSPSAASLPTVDTLLAAGANTDIKDKDGNTPLHLACKMSLEPA----VRSLLRCDANEMMANQHGLVAKDMVCDPNKEA---------ILEMLALAPADRAWRRRRWLVSRRS 683 A+ + ++ L GA + Q+N TPLH+A S++G L LL GA+ K+ TPLHL + P V LLR A+E +++G A DMV +E+ + ++LA APADRAWRRR +L+ R+ Sbjct: 566 AFDKAPAIDVLTEAGANIEA--QANGSTPLHVA-SQEGR------LAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRA 707
BLAST of mRNA_L-elsbetiae_contig15517.3879.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI) HSP 1 Score: 57.4 bits (137), Expect = 1.350e-5 Identity = 57/179 (31.84%), Postives = 83/179 (46.37%), Query Frame = -3 Query: 15 DGNTPLHLAC---KMSLEPAVRSLLRCDANEMMANQHGLVAKDMVCDPNKE-----------AILEMLALAPADRAWRRRRWLVSRRSSALKKRLESANHCPAAEES-EAGEQPKQDDPITKKTRGDDAGEESGGN-----SGVGGVELDQERYDFDHLVGWVVDIAPEGIFELVVGFL 491 +G TPLH AC + +E V LL+ A+E + G D + + N E + +LA APA+RAWRRR WLV RS A R + A E S + G++ D K R ++ GE +GG +G G V ++ +V VV + PE +F ++ FL Sbjct: 279 EGTTPLHRACYRQDIGVEATVDLLLQWGADETAVHNDGNTPADWLVENNNENGTTCSTAEIGRVRLLLARAPANRAWRRRCWLVMLRSCAKTARATTDKTGDADEGSNDVGDRK---DGKCKGARREN-GESAGGGVRSRMNGAGEVGVEGGASGLASIVASVVGLGPEEVFRSILSFL 453
BLAST of mRNA_L-elsbetiae_contig15517.3879.1 vs. uniprot
Match: A0A226NB02_CALSU (BTB domain-containing protein n=2 Tax=Archelosauria TaxID=1329799 RepID=A0A226NB02_CALSU) HSP 1 Score: 57.4 bits (137), Expect = 1.830e-5 Identity = 32/94 (34.04%), Postives = 48/94 (51.06%), Query Frame = -3 Query: 390 NALVAKGAQVNTVLQSNRQTPLHLACSRQGSSPS----AASLPTVDTLLAAGANTDIKDKDGNTPLHLACKMSLEPAVRSLLRCDANEMMANQH 659 N L+ GA+VN +++TPLHL S S A ++LL AGAN +++D G TPLH++ + EP LL+C ++ H Sbjct: 293 NFLIKNGARVNAATLGDQETPLHLVASYSAKKHSPDVMAEMAQIAESLLQAGANPNMQDSKGRTPLHMSIVVRNEPVFSQLLQCKQLDLELKDH 386
BLAST of mRNA_L-elsbetiae_contig15517.3879.1 vs. uniprot
Match: D7FVI9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI9_ECTSI) HSP 1 Score: 56.6 bits (135), Expect = 2.270e-5 Identity = 76/258 (29.46%), Postives = 100/258 (38.76%), Query Frame = -3 Query: 15 IVNALVAKGAQVNTVLQSNRQTPLHLACSRQGSSPSAASLPTVDTLLAAGANTDIK----------------DKD------------------------GNTPLHLACKMSLEPAV-RSLLRCDANEMMANQHGLVAKDMVCDPNKEAILEMLALAPADRAWRRRRWLVSRRSSALKKRLESANHCPAAEESEAGEQPKQDDPITKKTRGDDAGEESGGNSGVGGVELDQERYDFDHLVGWVVDIAPEGIFELVVGFL 665 +VNAL++KG + ++ T LHLA SLP ++TLL AGA+ DI+ KD G+TPLH AC S AV R LL+ A+E N G + + E+LA DRAWRRR WLV R LK + AG + + K RG G GG E E ++ V W+ + EG+F VV FL Sbjct: 211 VVNALLSKGGLEIDAVDTDGTTALHLAVIM------GRSLPIMETLLVAGADPDIRINTGGVQDCPLETACHSKDNIGTYHVCKTLIDHGADVNSRCPFGSTPLHHACDYSQSDAVLRLLLQAGADENALNDDG----------DTPGVRELLA----DRAWRRRGWLVMLRLRTLKA---------GGDGGAAGAR-------SAKQRG-----------GSGGGE---ESFNLSEAVEWL-GVVEEGVFRNVVSFL 417
BLAST of mRNA_L-elsbetiae_contig15517.3879.1 vs. uniprot
Match: A0A226PHJ9_COLVI (Uncharacterized protein n=1 Tax=Colinus virginianus TaxID=9014 RepID=A0A226PHJ9_COLVI) HSP 1 Score: 56.6 bits (135), Expect = 2.520e-5 Identity = 32/94 (34.04%), Postives = 48/94 (51.06%), Query Frame = -3 Query: 390 NALVAKGAQVNTVLQSNRQTPLHLACSRQGSSPS----AASLPTVDTLLAAGANTDIKDKDGNTPLHLACKMSLEPAVRSLLRCDANEMMANQH 659 N L+ GA+VN +++TPLHL S S A ++LL AGAN +++D G TPLH++ + EP LL+C ++ H Sbjct: 192 NFLIKNGARVNAATLGDQETPLHLVASYSPKKHSPDVMAEMAQIAESLLQAGANPNMQDSKGRTPLHMSIVVRNEPVFSQLLQCKQLDLELKDH 285
BLAST of mRNA_L-elsbetiae_contig15517.3879.1 vs. uniprot
Match: F1NSB6_CHICK (FYVE-type domain-containing protein n=55 Tax=Neognathae TaxID=8825 RepID=F1NSB6_CHICK) HSP 1 Score: 56.6 bits (135), Expect = 3.320e-5 Identity = 32/94 (34.04%), Postives = 48/94 (51.06%), Query Frame = -3 Query: 390 NALVAKGAQVNTVLQSNRQTPLHLACSRQGSSPS----AASLPTVDTLLAAGANTDIKDKDGNTPLHLACKMSLEPAVRSLLRCDANEMMANQH 659 N L+ GA+VN +++TPLHL S S A ++LL AGAN +++D G TPLH++ + EP LL+C ++ H Sbjct: 192 NFLIKNGARVNAATLGDQETPLHLVASYSPKKHSPDVMAEMAQIAESLLQAGANPNMQDSKGRTPLHMSIVVRNEPVFSQLLQCKQLDLELKDH 285
BLAST of mRNA_L-elsbetiae_contig15517.3879.1 vs. uniprot
Match: A0A850X6G4_PIACA (ANFY1 protein (Fragment) n=1 Tax=Piaya cayana TaxID=33601 RepID=A0A850X6G4_PIACA) HSP 1 Score: 56.2 bits (134), Expect = 4.120e-5 Identity = 32/94 (34.04%), Postives = 48/94 (51.06%), Query Frame = -3 Query: 390 NALVAKGAQVNTVLQSNRQTPLHLACSRQGSSPS----AASLPTVDTLLAAGANTDIKDKDGNTPLHLACKMSLEPAVRSLLRCDANEMMANQH 659 N L+ GA+VN +++TPLHL S S A ++LL AGAN +++D G TPLH++ + EP LL+C ++ H Sbjct: 306 NFLIKNGARVNAATLGDQETPLHLVASYSPKKHSPDVMAEMAQIAESLLQAGANPNMQDSKGRTPLHVSIVVRNEPVFSQLLQCKQLDLELKDH 399 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15517.3879.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15517.3879.1 >prot_L-elsbetiae_contig15517.3879.1 ID=prot_L-elsbetiae_contig15517.3879.1|Name=mRNA_L-elsbetiae_contig15517.3879.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=162bp MASLFGSHTMSLATSPCWLAIISFASHRNNDLTAGSRDILQARCSGVFPSback to top mRNA from alignment at L-elsbetiae_contig15517:1222..2158+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15517.3879.1 ID=mRNA_L-elsbetiae_contig15517.3879.1|Name=mRNA_L-elsbetiae_contig15517.3879.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=937bp|location=Sequence derived from alignment at L-elsbetiae_contig15517:1222..2158+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15517:1222..2158+ >mRNA_L-elsbetiae_contig15517.3879.1 ID=mRNA_L-elsbetiae_contig15517.3879.1|Name=mRNA_L-elsbetiae_contig15517.3879.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=972bp|location=Sequence derived from alignment at L-elsbetiae_contig15517:1222..2158+ (Laminarionema elsbetiae ELsaHSoW15)back to top |