mRNA_L-elsbetiae_contig15310.3768.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15310.3768.1 vs. uniprot
Match: D8LJP6_ECTSI (Zn-finger (Ran-binding)-3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJP6_ECTSI) HSP 1 Score: 227 bits (578), Expect = 6.690e-75 Identity = 107/118 (90.68%), Postives = 115/118 (97.46%), Query Frame = 1 Query: 22 NQVVAEWHMLVDAAKTPSAYLSSFHAFVLANALRRPILVYGDRFVRGKDGEPYAPSDVRGVYLPTLLAPDLCNKLPIAVGYTCVAVGKVGHFTALVGVDRELKHLPLVDEHGDNLPIR 375 +QV+AEWHMLV AAKTPSAYLSSFHAFVLANALRRPILVYGDRFVRG++GEPYAPSDVRGVYLPTL+ PD+C KLPIAVGYTCVAVGKVGHFTALVGVDREL+HLPLVDEHGD+LPIR Sbjct: 4 DQVIAEWHMLVQAAKTPSAYLSSFHAFVLANALRRPILVYGDRFVRGRNGEPYAPSDVRGVYLPTLVDPDVCYKLPIAVGYTCVAVGKVGHFTALVGVDRELRHLPLVDEHGDDLPIR 121
BLAST of mRNA_L-elsbetiae_contig15310.3768.1 vs. uniprot
Match: A0A6H5JBZ3_9PHAE (OTU domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBZ3_9PHAE) HSP 1 Score: 221 bits (562), Expect = 2.550e-64 Identity = 104/118 (88.14%), Postives = 111/118 (94.07%), Query Frame = 1 Query: 22 NQVVAEWHMLVDAAKTPSAYLSSFHAFVLANALRRPILVYGDRFVRGKDGEPYAPSDVRGVYLPTLLAPDLCNKLPIAVGYTCVAVGKVGHFTALVGVDRELKHLPLVDEHGDNLPIR 375 +QV+AEWHMLV AAKTPSAYLSSFHAFVLAN LRRPILVYGDRFVRG++GEPYAPSDVRGVYLPTL+ PD+C KLPIAVGYTCV VGKVGHFTALVGVD EL+HLPLVDEHGD LPIR Sbjct: 105 DQVIAEWHMLVQAAKTPSAYLSSFHAFVLANVLRRPILVYGDRFVRGRNGEPYAPSDVRGVYLPTLVDPDVCYKLPIAVGYTCVTVGKVGHFTALVGVDGELRHLPLVDEHGDGLPIR 222
BLAST of mRNA_L-elsbetiae_contig15310.3768.1 vs. uniprot
Match: D7G8I7_ECTSI (OTU domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8I7_ECTSI) HSP 1 Score: 150 bits (380), Expect = 8.240e-43 Identity = 70/118 (59.32%), Postives = 90/118 (76.27%), Query Frame = 1 Query: 25 QVVAEWHMLVDAAKTPSAYLSSFHAFVLANALRRPILVYGDRFVRG-KDGEPYAPSDVRGVYLPTLLAPDLCNKLPIAVGYTCVAVGKVGHFTALVGVDRELKHLPLVDEHGDNLPIR 375 ++ AEW ML++A KTPSA+LSSFH FV A+ LRRPI+VYG+ +V G + E + PSD+ G+YLPTL D C K IAV YTC VG+ GHF+ LVG+ ++LK+LPLVDEHG NLP+R Sbjct: 163 ELQAEWRMLMEAVKTPSAHLSSFHVFVFAHVLRRPIVVYGETYVYGANNSEAFVPSDMPGIYLPTLQHQDKCYKSAIAVAYTCPVVGRAGHFSPLVGMSKQLKYLPLVDEHGKNLPVR 280
BLAST of mRNA_L-elsbetiae_contig15310.3768.1 vs. uniprot
Match: A0A6H5L7A1_9PHAE (OTU domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A1_9PHAE) HSP 1 Score: 140 bits (354), Expect = 1.320e-38 Identity = 68/115 (59.13%), Postives = 85/115 (73.91%), Query Frame = 1 Query: 34 AEWHMLVDAAKTPSAYLSSFHAFVLANALRRPILVYGDRFVRG-KDGEPYAPSDVRGVYLPTLLAPDLCNKLPIAVGYTCVAVGKVGHFTALVGVDRELKHLPLVDEHGDNLPIR 375 AEW M+++A KTPSA+LSSFH FVLA+ LRRPI+VYG V G + E + PSD+ G YLPTL D C K IAV YTC AVG+ GHF+ LVG+ ++LK++P VDEHG NL +R Sbjct: 195 AEWRMVMEAVKTPSAHLSSFHVFVLAHVLRRPIVVYGKNHVYGANNSEAFVPSDMPGNYLPTLEHQDKCYKSAIAVAYTCPAVGRAGHFSPLVGMSKQLKYIPSVDEHGKNLRVR 309
BLAST of mRNA_L-elsbetiae_contig15310.3768.1 vs. uniprot
Match: A0A023F2H3_TRIIF (Ubiquitinyl hydrolase 1 (Fragment) n=5 Tax=Triatominae TaxID=70999 RepID=A0A023F2H3_TRIIF) HSP 1 Score: 90.1 bits (222), Expect = 1.580e-18 Identity = 52/129 (40.31%), Postives = 65/129 (50.39%), Query Frame = 1 Query: 25 QVVAEWHMLVDAAKTPSAYLSSFHAFVLANALRRPILVYGDRFVRGKDGEPYAPSDVRGVYLPTLLAPDLCNKLPIAVGYTCVAVGKVGHFTALVGVDRELKH-------------LPLVDEHGDNLPI 372 Q +W LV A P A L H F LA+ LRRP++VYG +FV+ GE + +GVYLP L P C+ P+A+GYT GHF+ALV V+ H LPLVD LPI Sbjct: 426 QWAEDWSSLVGRASQPGASLQQLHVFALAHVLRRPVIVYGVKFVKSFRGEDIGYAGFQGVYLPLLWEPSFCSVTPVALGYTR------GHFSALVPVEHSRTHEMGVPNNMVRVCYLPLVDSERKLLPI 548
BLAST of mRNA_L-elsbetiae_contig15310.3768.1 vs. uniprot
Match: A0A6A7G5P6_9CRUS (Ubiquitin thioesterase trabid-like (Fragment) n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G5P6_9CRUS) HSP 1 Score: 86.7 bits (213), Expect = 1.700e-18 Identity = 48/106 (45.28%), Postives = 61/106 (57.55%), Query Frame = 1 Query: 22 NQVVAEWHMLVDAAKTPSAYLSSFHAFVLANALRRPILVYGDRFVRGKDGEPYAPSDVRGVYLPTLLAPDLCNKLPIAVGYTCVAVGKVGHFTALVGVDRELKHLP 339 NQV+ EW L+ A P + L H FVLA+ LRRPI+VYG ++V+ GE + GVYLP L P+ C K PIA+GYT GHF ALV + + H P Sbjct: 7 NQVLEEWAELLCLATQPGSALDQLHIFVLAHILRRPIVVYGVKYVKSFRGEDLGYARFEGVYLPLLWEPNFCCKSPIALGYTR------GHFCALVPICPQSIHAP 106
BLAST of mRNA_L-elsbetiae_contig15310.3768.1 vs. uniprot
Match: A0A7R9S7V1_9CRUS (Hypothetical protein (Fragment) n=1 Tax=Argulus foliaceus TaxID=509924 RepID=A0A7R9S7V1_9CRUS) HSP 1 Score: 86.3 bits (212), Expect = 3.540e-17 Identity = 50/129 (38.76%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 25 QVVAEWHMLVDAAKTPSAYLSSFHAFVLANALRRPILVYGDRFVRGKDGEPYAPSDVRGVYLPTLLAPDLCNKLPIAVGYTCVAVGKVGHFTALV------------GVDRELKHLPLVDEHGDNLPIR 375 Q+ EW L++ A P + L FH FVLA+ L RPI+VYG+++++G G+ + G+YLPTL +C++ PIA+GYT GH +ALV G D LPLVD+ G LP++ Sbjct: 477 QLAEEWAKLLNGASIPGSSLEPFHIFVLAHILCRPIIVYGEKYIKGFHGDYVGLARFEGIYLPTLCDIHICSQSPIALGYTR------GHISALVFKEPAPNTESGKGEDPVFL-LPLVDQTGSILPVQ 598
BLAST of mRNA_L-elsbetiae_contig15310.3768.1 vs. uniprot
Match: UPI0003F09090 (ubiquitin thioesterase ZRANB1-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F09090) HSP 1 Score: 86.3 bits (212), Expect = 3.550e-17 Identity = 49/130 (37.69%), Postives = 67/130 (51.54%), Query Frame = 1 Query: 37 EWHMLVDAAKTPSAYLSSFHAFVLANALRRPILVYGDRFVRGKDGEPYAPSDVRGVYLPTLLAPDLCNKLPIAVGYTCVAVGKVGHFTALVGVDRE------------------LKHLPLVDEHGDNLPI 372 +W +++ A P A L H F LA+ LRRPI+VYG +F++ GE + +GVYLP L P C K PIA+GYT GHF+ALV +D + + +LPL D G LP+ Sbjct: 487 DWAIMLSLASQPGAPLEQTHIFALAHILRRPIIVYGVKFIKSFRGETLGYARFQGVYLPLLWEPGFCWKSPIALGYTR------GHFSALVSMDTDTDSNLGAGAYVDSIDDVQVTYLPLTDNEGKLLPV 610
BLAST of mRNA_L-elsbetiae_contig15310.3768.1 vs. uniprot
Match: A0A7R8X4J5_9CRUS (Hypothetical protein n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R8X4J5_9CRUS) HSP 1 Score: 85.9 bits (211), Expect = 4.820e-17 Identity = 49/121 (40.50%), Postives = 67/121 (55.37%), Query Frame = 1 Query: 25 QVVAEWHMLVDAAKTPSAYLSSFHAFVLANALRRPILVYGDRFVRGKDGEPYAPSDVRGVYLPTLLAPDLCNKLPIAVGYTCVAVGKVGHFTALVGVDRE----LKH-LPLVDEHGDNLPI 372 Q+ A+W ++++ A P L H FVL + LRRPI+VYG ++V+ GE + GVYLP L P C K PI +GYT GHF+ALV +E L + +PLV G LP+ Sbjct: 443 QLAADWAIMLNIASQPGTPLEQIHIFVLTHILRRPIIVYGVKYVKSFRGEALGLARFEGVYLPLLWEPSFCCKSPITLGYTR------GHFSALVPTSQEDGTCLDYSVPLVSSDGKLLPV 557
BLAST of mRNA_L-elsbetiae_contig15310.3768.1 vs. uniprot
Match: A0A2R7WDH7_ONCFA (Ubiquitinyl hydrolase 1 n=1 Tax=Oncopeltus fasciatus TaxID=7536 RepID=A0A2R7WDH7_ONCFA) HSP 1 Score: 85.9 bits (211), Expect = 4.880e-17 Identity = 50/126 (39.68%), Postives = 66/126 (52.38%), Query Frame = 1 Query: 25 QVVAEWHMLVDAAKTPSAYLSSFHAFVLANALRRPILVYGDRFVRGKDGEPYAPSDVRGVYLPTLLAPDLCNKLPIAVGYTCVAVGKVGHFTALVGVDR----------ELKHLPLVDEHGDNLPI 372 Q +W LV A A L H F LA+ LRRP++VYG +FV+ GE + GVYLP L P CN P+A+GYT GHF+ALV ++ ++ +LPLVD+ LPI Sbjct: 515 QWAEDWAALVKRATQKGASLQQLHVFTLAHVLRRPVIVYGVKFVKSFRGEDLGYAGFEGVYLPLLWEPSFCNVSPVALGYTR------GHFSALVPMETLQPDTAKDSIQVCYLPLVDKDRKLLPI 634 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15310.3768.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15310.3768.1 >prot_L-elsbetiae_contig15310.3768.1 ID=prot_L-elsbetiae_contig15310.3768.1|Name=mRNA_L-elsbetiae_contig15310.3768.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=125bp MLTSHHPNQVVAEWHMLVDAAKTPSAYLSSFHAFVLANALRRPILVYGDRback to top mRNA from alignment at L-elsbetiae_contig15310:385..2679- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15310.3768.1 ID=mRNA_L-elsbetiae_contig15310.3768.1|Name=mRNA_L-elsbetiae_contig15310.3768.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2295bp|location=Sequence derived from alignment at L-elsbetiae_contig15310:385..2679- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15310:385..2679- >mRNA_L-elsbetiae_contig15310.3768.1 ID=mRNA_L-elsbetiae_contig15310.3768.1|Name=mRNA_L-elsbetiae_contig15310.3768.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=750bp|location=Sequence derived from alignment at L-elsbetiae_contig15310:385..2679- (Laminarionema elsbetiae ELsaHSoW15)back to top |