mRNA_L-elsbetiae_contig15298.3756.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15298.3756.1 vs. uniprot
Match: D7G5Y2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y2_ECTSI) HSP 1 Score: 184 bits (466), Expect = 1.940e-52 Identity = 85/88 (96.59%), Postives = 87/88 (98.86%), Query Frame = 2 Query: 2 AFVYTFGFVLMTPQLYINYKLKSVAHLPWRFLCYRSLNTVIDDLFAFVIRMPTMHRLSCFRDDVVFVVYLYQRWIYPVDANRPQDRGA 265 AFVYTFGFVLMTPQLYINYKLKSVAHLPWRFLCYRSLNTVIDDLFAFVIRMPTMHRLSCFRDDVVFVVYLYQRWIYPVD +RPQDRG+ Sbjct: 332 AFVYTFGFVLMTPQLYINYKLKSVAHLPWRFLCYRSLNTVIDDLFAFVIRMPTMHRLSCFRDDVVFVVYLYQRWIYPVDESRPQDRGS 419
BLAST of mRNA_L-elsbetiae_contig15298.3756.1 vs. uniprot
Match: A0A6H5KJZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJZ5_9PHAE) HSP 1 Score: 184 bits (466), Expect = 3.100e-51 Identity = 85/88 (96.59%), Postives = 87/88 (98.86%), Query Frame = 2 Query: 2 AFVYTFGFVLMTPQLYINYKLKSVAHLPWRFLCYRSLNTVIDDLFAFVIRMPTMHRLSCFRDDVVFVVYLYQRWIYPVDANRPQDRGA 265 AFVYTFGFVLMTPQLYINYKLKSVAHLPWRFLCYRSLNTVIDDLFAFVIRMPTMHRLSCFRDDVVFVVYLYQRWIYPVD +RPQDRG+ Sbjct: 472 AFVYTFGFVLMTPQLYINYKLKSVAHLPWRFLCYRSLNTVIDDLFAFVIRMPTMHRLSCFRDDVVFVVYLYQRWIYPVDQSRPQDRGS 559
BLAST of mRNA_L-elsbetiae_contig15298.3756.1 vs. uniprot
Match: A0A7S3UTI6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTI6_HETAK) HSP 1 Score: 157 bits (396), Expect = 1.530e-44 Identity = 68/80 (85.00%), Postives = 77/80 (96.25%), Query Frame = 2 Query: 8 VYTFGFVLMTPQLYINYKLKSVAHLPWRFLCYRSLNTVIDDLFAFVIRMPTMHRLSCFRDDVVFVVYLYQRWIYPVDANR 247 VYTFGFVLMTPQLYINY+LKSVAHLPWRFLCYR +NT IDDLFAF+I+MPTMHR+SCFRDDVVF++Y+YQRWIYPVD+ R Sbjct: 106 VYTFGFVLMTPQLYINYRLKSVAHLPWRFLCYRFVNTFIDDLFAFIIKMPTMHRVSCFRDDVVFLIYIYQRWIYPVDSKR 185
BLAST of mRNA_L-elsbetiae_contig15298.3756.1 vs. uniprot
Match: A0A7S1GE21_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GE21_9STRA) HSP 1 Score: 149 bits (377), Expect = 7.530e-43 Identity = 65/85 (76.47%), Postives = 76/85 (89.41%), Query Frame = 2 Query: 8 VYTFGFVLMTPQLYINYKLKSVAHLPWRFLCYRSLNTVIDDLFAFVIRMPTMHRLSCFRDDVVFVVYLYQRWIYPVDANRPQDRG 262 VY FGF LMTPQL+INYK+KSVAHLP R + YRS+NT IDDLFAF+IRMP MHR+SCFRDD+VFV+Y+YQRWIYPVD+NRP + G Sbjct: 8 VYAFGFALMTPQLFINYKMKSVAHLPLRVMLYRSINTFIDDLFAFIIRMPIMHRISCFRDDLVFVIYMYQRWIYPVDSNRPSEGG 92
BLAST of mRNA_L-elsbetiae_contig15298.3756.1 vs. uniprot
Match: A0A7S4FEL9_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FEL9_9EUGL) HSP 1 Score: 148 bits (374), Expect = 8.830e-42 Identity = 63/85 (74.12%), Postives = 76/85 (89.41%), Query Frame = 2 Query: 8 VYTFGFVLMTPQLYINYKLKSVAHLPWRFLCYRSLNTVIDDLFAFVIRMPTMHRLSCFRDDVVFVVYLYQRWIYPVDANRPQDRG 262 +YTFGF++MTPQL+INYKLKSVAHLPWR Y++LNT IDDLFAF+I+MPT+HRLSCFRDD++F+VYLYQRWIYPVD R + G Sbjct: 40 IYTFGFIMMTPQLFINYKLKSVAHLPWRTFVYKALNTFIDDLFAFIIKMPTLHRLSCFRDDLIFLVYLYQRWIYPVDTTRVNEFG 124
BLAST of mRNA_L-elsbetiae_contig15298.3756.1 vs. uniprot
Match: A0A662YE96_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YE96_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.980e-41 Identity = 67/83 (80.72%), Postives = 72/83 (86.75%), Query Frame = 2 Query: 8 VYTFGFVLMTPQLYINYKLKSVAHLPWRFLCYRSLNTVIDDLFAFVIRMPTMHRLSCFRDDVVFVVYLYQRWIYPVDANRPQD 256 VY GFV M PQL INY+LKSVAHL WR L YR+LNT IDDLFAFVI+MPT+HR+SCFRDDVVFVVYLYQRWIYPVDA RP D Sbjct: 37 VYALGFVFMLPQLVINYRLKSVAHLQWRLLVYRALNTFIDDLFAFVIQMPTLHRISCFRDDVVFVVYLYQRWIYPVDAQRPSD 119
BLAST of mRNA_L-elsbetiae_contig15298.3756.1 vs. uniprot
Match: A0A7S0W2U2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W2U2_9CRYP) HSP 1 Score: 145 bits (366), Expect = 4.030e-41 Identity = 62/85 (72.94%), Postives = 75/85 (88.24%), Query Frame = 2 Query: 8 VYTFGFVLMTPQLYINYKLKSVAHLPWRFLCYRSLNTVIDDLFAFVIRMPTMHRLSCFRDDVVFVVYLYQRWIYPVDANRPQDRG 262 VYTFGF++MTPQL+INYKLKSVAHLPWR + Y+ LNT+IDDLFAFVI+MPT+HRLSCFRDDV+F++Y+YQRW Y VD R + G Sbjct: 16 VYTFGFIMMTPQLFINYKLKSVAHLPWRAMVYKFLNTIIDDLFAFVIKMPTLHRLSCFRDDVIFLIYIYQRWAYSVDRTRVNEYG 100
BLAST of mRNA_L-elsbetiae_contig15298.3756.1 vs. uniprot
Match: X6M4L5_RETFI (Uncharacterized protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6M4L5_RETFI) HSP 1 Score: 145 bits (365), Expect = 8.500e-41 Identity = 60/87 (68.97%), Postives = 76/87 (87.36%), Query Frame = 2 Query: 2 AFVYTFGFVLMTPQLYINYKLKSVAHLPWRFLCYRSLNTVIDDLFAFVIRMPTMHRLSCFRDDVVFVVYLYQRWIYPVDANRPQDRG 262 +F+Y FGF+++ PQLY+NYKLKSVAHLPWR L Y+ LNT+IDDLFAF+I MP MHRLSCFRDDV+F++YLYQ+WIYP+D +R + G Sbjct: 15 SFIYMFGFIMLCPQLYLNYKLKSVAHLPWRMLTYKFLNTIIDDLFAFLITMPWMHRLSCFRDDVIFLIYLYQKWIYPIDYSRTNEYG 101
BLAST of mRNA_L-elsbetiae_contig15298.3756.1 vs. uniprot
Match: A0A662Y206_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y206_9STRA) HSP 1 Score: 149 bits (376), Expect = 4.160e-40 Identity = 65/87 (74.71%), Postives = 76/87 (87.36%), Query Frame = 2 Query: 2 AFVYTFGFVLMTPQLYINYKLKSVAHLPWRFLCYRSLNTVIDDLFAFVIRMPTMHRLSCFRDDVVFVVYLYQRWIYPVDANRPQDRG 262 +FVY FGF++MTPQLYINYKLKSVAHLPWR + Y+SLNT IDDLFAFVI+MP MHRLSCFRDD++F +Y+YQRW YPVDA R + G Sbjct: 159 SFVYAFGFIMMTPQLYINYKLKSVAHLPWRAMVYKSLNTFIDDLFAFVIKMPWMHRLSCFRDDLIFFIYIYQRWKYPVDAKRTNEFG 245
BLAST of mRNA_L-elsbetiae_contig15298.3756.1 vs. uniprot
Match: A0A1E7FBT5_9STRA (Cleft lip and palate transmembrane 1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBT5_9STRA) HSP 1 Score: 149 bits (375), Expect = 6.750e-40 Identity = 64/85 (75.29%), Postives = 76/85 (89.41%), Query Frame = 2 Query: 8 VYTFGFVLMTPQLYINYKLKSVAHLPWRFLCYRSLNTVIDDLFAFVIRMPTMHRLSCFRDDVVFVVYLYQRWIYPVDANRPQDRG 262 VY FGFVLMTPQL++NYK+KSVAHLPWR L Y+SLNT IDDLF+F+IRMPTM R+SCFRDD+VF +YLYQRW+YPVD +RP + G Sbjct: 231 VYAFGFVLMTPQLFLNYKMKSVAHLPWRVLVYKSLNTFIDDLFSFIIRMPTMARISCFRDDIVFFIYLYQRWLYPVDTSRPVEGG 315 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15298.3756.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15298.3756.1 >prot_L-elsbetiae_contig15298.3756.1 ID=prot_L-elsbetiae_contig15298.3756.1|Name=mRNA_L-elsbetiae_contig15298.3756.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=79bp MTPQLYINYKLKSVAHLPWRFLCYRSLNTVIDDLFAFVIRMPTMHRLSCFback to top mRNA from alignment at L-elsbetiae_contig15298:1787..3201- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15298.3756.1 ID=mRNA_L-elsbetiae_contig15298.3756.1|Name=mRNA_L-elsbetiae_contig15298.3756.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1415bp|location=Sequence derived from alignment at L-elsbetiae_contig15298:1787..3201- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15298:1787..3201- >mRNA_L-elsbetiae_contig15298.3756.1 ID=mRNA_L-elsbetiae_contig15298.3756.1|Name=mRNA_L-elsbetiae_contig15298.3756.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=474bp|location=Sequence derived from alignment at L-elsbetiae_contig15298:1787..3201- (Laminarionema elsbetiae ELsaHSoW15)back to top |