mRNA_L-elsbetiae_contig1529.3753.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1529.3753.1
Unique NamemRNA_L-elsbetiae_contig1529.3753.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1529.3753.1 vs. uniprot
Match: D7G880_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G880_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 1.520e-77
Identity = 287/320 (89.69%), Postives = 295/320 (92.19%), Query Frame = 1 
Query:   52 MFVKKDTRKIPDILADDNDEREELHLGRRSSEFVSNGIKVVCSSRHTPRLQKLQKLSLYDNMLSSVKGIGSLSATPLKHLNLGRNQLKSLPPELGKVGTLETLWADDNAITDFPRSVLQLKRLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVEAAWGRPDASTGKLDADTVGSPRKVEVVIRGNPITAEPKKVDASKIGSGSEEAGQAVPAAMDETQ 1011
            MFVKKDTRKIPDILAD+ DEREELHLGRRSSEFVSNGIKVVCSSRH PRLQKLQKLSLYDNMLS VKGIG+LSATPLKHLNLGRNQLKSLPPELGKVGTLETLW DDNAITDFPRSVLQLKRLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVEAAWGR D  TGKLD  TV SPRK EVVIRGNPI A+PK+   S  G  +E   Q + + MDET+
Sbjct:    1 MFVKKDTRKIPDILADEGDEREELHLGRRSSEFVSNGIKVVCSSRHIPRLQKLQKLSLYDNMLSHVKGIGALSATPLKHLNLGRNQLKSLPPELGKVGTLETLWVDDNAITDFPRSVLQLKRLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVEAAWGRADPVTGKLDPATVDSPRKTEVVIRGNPI-ADPKQAGGSASGYTAE---QDMTSLMDETR 316
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BLAST of mRNA_L-elsbetiae_contig1529.3753.1 vs. uniprot
Match: A0A835YNM3_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNM3_9STRA)

HSP 1 Score: 145 bits (366), Expect = 2.960e-36
Identity = 73/124 (58.87%), Postives = 92/124 (74.19%), Query Frame = 1 
Query:   52 MFVKKDTRKIPDILADDNDEREELHLGRRSSEFVSNGIKVVCSSRHTPRLQKLQKLSLYDNMLSSVKGIGSLS--ATPLKHLNLGRNQLKSLPPELGKVGTLETLWADDNAITDFPRSVLQLKR 417
            MF+KKD RKI +ILAD  D REEL LGRRS EF   G++V+CS  + P L +L+ LS+YDN+L+S++G+G L   AT L HLNLGRNQL++LP ELG V TLETLW DDN + +FP  V +L R
Sbjct:    1 MFIKKDLRKINEILADREDSREELRLGRRSGEF-KGGLRVICSPHNIPALAQLRSLSVYDNLLTSIEGVGLLGNGATALLHLNLGRNQLRTLPQELGLVSTLETLWLDDNLLDEFPLPVTELTR 123
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BLAST of mRNA_L-elsbetiae_contig1529.3753.1 vs. uniprot
Match: W4FL85_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FL85_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.510e-27
Identity = 59/104 (56.73%), Postives = 78/104 (75.00%), Query Frame = 1 
Query:   52 MFVKKDTRKIPDILADDNDEREELHLGRRSSEFVSNGIKVVCSSRHTPRLQKLQKLSLYDNMLSSVKGIGSLSATPLKHLNLGRNQLKSLPPELGKVGTLETLW 363
            MFV KD RK+P+I+AD  D+RE+L LGRRS+EF  N ++++CS  + P   +LQKLSLYDN LSS+ GIG LS+TPL  L+LG+NQL  LP E+G +  L+ LW
Sbjct:    1 MFVVKDLRKVPEIVADPADDREQLRLGRRSTEFDGN-LRILCSPVNIPAFSRLQKLSLYDNQLSSIDGIGLLSSTPLSILDLGQNQLDHLPHEIGSLRHLKELW 103
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BLAST of mRNA_L-elsbetiae_contig1529.3753.1 vs. uniprot
Match: A0A1V9YVQ5_9STRA (Membrane protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YVQ5_9STRA)

HSP 1 Score: 119 bits (299), Expect = 6.040e-27
Identity = 62/120 (51.67%), Postives = 82/120 (68.33%), Query Frame = 1 
Query:   52 MFVKKDTRKIPDILADDNDEREELHLGRRSSEFVSNGIKVVCSSRHTPRLQKLQKLSLYDNMLSSVKGIGSLSATPLKHLNLGRNQLKSLPPELGKVGTLETLWADDNAITDFPRSVLQL 411
            MFV KD RKIP I+ D+ D REEL LGRRS+EF  + +KV+CS  + P    L++LSLYDN L SV  IG L+ +PL+ L++G N L SLP E+G +  LE LW  +NA+   P S+L+L
Sbjct:    1 MFVVKDLRKIPVIMLDEADSREELRLGRRSAEFQGS-LKVLCSLDNLPAFGNLRRLSLYDNQLQSVDRIGILANSPLQVLDIGYNLLTSLPTEIGTLKNLEELWVTNNALESIPESILEL 119
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BLAST of mRNA_L-elsbetiae_contig1529.3753.1 vs. uniprot
Match: A0A6G0WAD8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAD8_9STRA)

HSP 1 Score: 119 bits (298), Expect = 8.680e-27
Identity = 60/118 (50.85%), Postives = 82/118 (69.49%), Query Frame = 1 
Query:   52 MFVKKDTRKIPDILADDNDEREELHLGRRSSEFVSNGIKVVCSSRHTPRLQKLQKLSLYDNMLSSVKGIGSLSATPLKHLNLGRNQLKSLPPELGKVGTLETLWADDNAITDFPRSVL 405
            MFV KD RKIPDI+ DDND RE+L LGRR++EF  + + ++C+  +     KLQKLSLYDN L S++ IG L+ TPL  L+LG+NQL+SLP E+G +  L+ LW  +N +     +VL
Sbjct:    1 MFVVKDLRKIPDIVRDDNDTREQLRLGRRAAEFQGD-LSILCTPSNVAAFSKLQKLSLYDNNLHSIERIGLLAETPLAILDLGQNQLESLPDEMGTLVHLKELWVTNNKLMTISEAVL 117
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BLAST of mRNA_L-elsbetiae_contig1529.3753.1 vs. uniprot
Match: A0A067CJY8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJY8_SAPPC)

HSP 1 Score: 118 bits (295), Expect = 2.230e-26
Identity = 61/108 (56.48%), Postives = 76/108 (70.37%), Query Frame = 1 
Query:   52 MFVKKDTRKIPDILADDNDEREELHLGRRSSEFVSNGIKVVCSSRHTPRLQKLQKLSLYDNMLSSVKGIGSLSATPLKHLNLGRNQLKSLPPELGKVGTLETLWADDN 375
            MFV+KD RKIP I+ D+ND REEL LGRRS+EF+ N +KV+CS  + P    L++LSLYDN L SV  IG L+ TPL  L+LG N L SLP E+G +  LE LW  +N
Sbjct:    1 MFVQKDLRKIPAIMVDENDTREELRLGRRSAEFLGN-LKVLCSLDNLPAFGNLRRLSLYDNQLHSVDRIGILANTPLAVLDLGYNHLTSLPAEIGALKNLEELWVTNN 107
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BLAST of mRNA_L-elsbetiae_contig1529.3753.1 vs. uniprot
Match: A0A485L9Z5_9STRA (Aste57867_17909 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9Z5_9STRA)

HSP 1 Score: 118 bits (295), Expect = 2.270e-26
Identity = 60/107 (56.07%), Postives = 77/107 (71.96%), Query Frame = 1 
Query:   52 MFVKKDTRKIPDILADDNDEREELHLGRRSSEFVSNGIKVVCSSRHTPRLQKLQKLSLYDNMLSSVKGIGSLSATPLKHLNLGRNQLKSLPPELGKVGTLETLWADD 372
            MFV KD RKIP+IL D  DERE++ LGRRS+EF  N + V+C+  +   L KLQKLSLYDN L S++ IG LS TPL  L+LG+NQL+ LP E+G + TL+ LW  +
Sbjct:    1 MFVVKDLRKIPEILQDPEDEREQMRLGRRSAEFSGN-LDVLCTPSNVTALTKLQKLSLYDNQLVSIERIGLLSKTPLCILDLGQNQLERLPDEIGSITTLKELWVSN 106
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BLAST of mRNA_L-elsbetiae_contig1529.3753.1 vs. uniprot
Match: W4FJA0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FJA0_9STRA)

HSP 1 Score: 117 bits (294), Expect = 5.240e-26
Identity = 67/148 (45.27%), Postives = 88/148 (59.46%), Query Frame = 1 
Query:   52 MFVKKDTRKIPDILADDNDEREELHLGRRSSEFVSNGIKVVCSSRHTPRLQKLQKLSLYDNMLSSVKGIGSLSATPLKHLNLGRNQLKSLPPE-------------------------LGKVGTLETLWADDNAITDFPRSVLQLKRL 420
            MFV KD RK+P+I+AD  D+RE+L LGRRS+EF  N ++++CS  + P   +LQKLSLYDN LSS+ GIG LS+TPL  L+LG+NQL  LP E                         +G +  L+ LW  +N +T  P SVL L  L
Sbjct:    1 MFVVKDLRKVPEIVADPADDREQLRLGRRSTEFDGN-LRILCSPVNIPAFSRLQKLSLYDNQLSSIDGIGLLSSTPLSILDLGQNQLDHLPHEVHSMQPRIGNSCNLTPILVLGRIVQIGSLRHLKELWLSNNWLTSVPDSVLTLPLL 147
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BLAST of mRNA_L-elsbetiae_contig1529.3753.1 vs. uniprot
Match: A0A3R7BQF1_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7BQF1_9STRA)

HSP 1 Score: 118 bits (296), Expect = 4.900e-25
Identity = 67/150 (44.67%), Postives = 90/150 (60.00%), Query Frame = 1 
Query:   46 SSMFVKKDTRKIPDILADDNDEREELHLGRRSSEFVSNGIKVVCSSRHTPRLQKLQKLSLYDNMLSSVKGIGSLSATPLKHLNLGRNQLKSLPPE-------------------------LGKVGTLETLWADDNAITDFPRSVLQLKRL 420
            S+MFV KD RK+P+I+AD  D+RE+L LGRRS+EF  N ++++CS  + P   +LQKLSLYDN L+S+ GIG LS+TPL  L+LG+NQL  LP E                         +G +  L+ LW  +N +T  P SVL L  L
Sbjct:  356 SNMFVVKDLRKVPEIVADPADDREQLRLGRRSTEFDGN-LRILCSPVNIPAFSRLQKLSLYDNQLTSIDGIGLLSSTPLSILDLGQNQLDHLPHEVHSMQPRIGNSCNLTPILVLGRIVQIGSLRHLKELWLSNNWLTSVPDSVLTLPLL 504
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BLAST of mRNA_L-elsbetiae_contig1529.3753.1 vs. uniprot
Match: A0A024TAP0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TAP0_9STRA)

HSP 1 Score: 111 bits (277), Expect = 6.780e-24
Identity = 53/104 (50.96%), Postives = 76/104 (73.08%), Query Frame = 1 
Query:   52 MFVKKDTRKIPDILADDNDEREELHLGRRSSEFVSNGIKVVCSSRHTPRLQKLQKLSLYDNMLSSVKGIGSLSATPLKHLNLGRNQLKSLPPELGKVGTLETLW 363
            MFV KD RK+ +I+AD  D RE++ LGRRSSEF  N ++++C+  + P   +L KLSLYDN L+S++GIG L +TPL  L+LG+N+L+ LP E+G +  L+ LW
Sbjct:    1 MFVVKDLRKVAEIVADPKDAREQMRLGRRSSEFQGN-LRILCTPANIPAFSRLTKLSLYDNQLTSIEGIGLLESTPLSILDLGQNRLEHLPDEIGCLRHLKELW 103
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1529.3753.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7G880_ECTSI1.520e-7789.69Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
A0A835YNM3_9STRA2.960e-3658.87Leucine rich repeat protein n=1 Tax=Tribonema minu... [more]
W4FL85_9STRA1.510e-2756.73Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A1V9YVQ5_9STRA6.040e-2751.67Membrane protein n=1 Tax=Thraustotheca clavata Tax... [more]
A0A6G0WAD8_9STRA8.680e-2750.85Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A067CJY8_SAPPC2.230e-2656.48Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A485L9Z5_9STRA2.270e-2656.07Aste57867_17909 protein n=1 Tax=Aphanomyces stella... [more]
W4FJA0_9STRA5.240e-2645.27Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A3R7BQF1_9STRA4.900e-2544.67Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A024TAP0_9STRA6.780e-2450.96Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1529contigL-elsbetiae_contig1529:2835..9459 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score255.8
Seed ortholog evalue2.8e-65
Seed eggNOG ortholog2880.D7G880
Preferred nameLRRC17
KEGG rclassRC00295
KEGG koko:K01768,ko:K19613
KEGG ReactionR00089,R00434
KEGG Pathwayko00230,ko02025,ko04014,ko04113,ko04213,map00230,map02025,map04014,map04113,map04213
KEGG ModuleM00695
Hectar predicted targeting categoryother localisation
GOsGO:0001501,GO:0002376,GO:0002520,GO:0002682,GO:0002683,GO:0002761,GO:0002762,GO:0005575,GO:0005576,GO:0005615,GO:0007275,GO:0008150,GO:0009888,GO:0032501,GO:0032502,GO:0044421,GO:0045595,GO:0045596,GO:0045637,GO:0045638,GO:0045670,GO:0045671,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048539,GO:0048731,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0051239,GO:0051241,GO:0060348,GO:0065007,GO:1902105,GO:1902106,GO:1903706,GO:1903707,GO:2000026
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG4886@1,KOG0619@2759
EC4.6.1.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Ec32 ortholog descriptionHypothetical leucine rich repeat protein
Ec32 orthologEc-12_001130.1
Exons8
Model size1392
Cds size963
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1529.3753.1prot_L-elsbetiae_contig1529.3753.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1529 2886..9081 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815622.760625-UTR-L-elsbetiae_contig1529:2834..28851622815622.760625-UTR-L-elsbetiae_contig1529:2834..2885Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1529 2835..2885 +
1691682997.2848086-UTR-L-elsbetiae_contig1529:2834..28851691682997.2848086-UTR-L-elsbetiae_contig1529:2834..2885Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1529 2835..2885 +
1622815622.8773222-UTR-L-elsbetiae_contig1529:9081..94591622815622.8773222-UTR-L-elsbetiae_contig1529:9081..9459Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1529 9082..9459 +
1691682997.3731232-UTR-L-elsbetiae_contig1529:9081..94591691682997.3731232-UTR-L-elsbetiae_contig1529:9081..9459Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1529 9082..9459 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815622.7722106-CDS-L-elsbetiae_contig1529:2885..29711622815622.7722106-CDS-L-elsbetiae_contig1529:2885..2971Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1529 2886..2971 +
1691682997.298261-CDS-L-elsbetiae_contig1529:2885..29711691682997.298261-CDS-L-elsbetiae_contig1529:2885..2971Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1529 2886..2971 +
1622815622.7826278-CDS-L-elsbetiae_contig1529:5459..55741622815622.7826278-CDS-L-elsbetiae_contig1529:5459..5574Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1529 5460..5574 +
1691682997.30752-CDS-L-elsbetiae_contig1529:5459..55741691682997.30752-CDS-L-elsbetiae_contig1529:5459..5574Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1529 5460..5574 +
1622815622.7945647-CDS-L-elsbetiae_contig1529:6182..62691622815622.7945647-CDS-L-elsbetiae_contig1529:6182..6269Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1529 6183..6269 +
1691682997.3173869-CDS-L-elsbetiae_contig1529:6182..62691691682997.3173869-CDS-L-elsbetiae_contig1529:6182..6269Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1529 6183..6269 +
1622815622.8131437-CDS-L-elsbetiae_contig1529:6839..69131622815622.8131437-CDS-L-elsbetiae_contig1529:6839..6913Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1529 6840..6913 +
1691682997.327307-CDS-L-elsbetiae_contig1529:6839..69131691682997.327307-CDS-L-elsbetiae_contig1529:6839..6913Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1529 6840..6913 +
1622815622.8257275-CDS-L-elsbetiae_contig1529:7388..74311622815622.8257275-CDS-L-elsbetiae_contig1529:7388..7431Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1529 7389..7431 +
1691682997.3384988-CDS-L-elsbetiae_contig1529:7388..74311691682997.3384988-CDS-L-elsbetiae_contig1529:7388..7431Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1529 7389..7431 +
1622815622.8376896-CDS-L-elsbetiae_contig1529:7679..77981622815622.8376896-CDS-L-elsbetiae_contig1529:7679..7798Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1529 7680..7798 +
1691682997.3467112-CDS-L-elsbetiae_contig1529:7679..77981691682997.3467112-CDS-L-elsbetiae_contig1529:7679..7798Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1529 7680..7798 +
1622815622.8502328-CDS-L-elsbetiae_contig1529:8216..84121622815622.8502328-CDS-L-elsbetiae_contig1529:8216..8412Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1529 8217..8412 +
1691682997.354997-CDS-L-elsbetiae_contig1529:8216..84121691682997.354997-CDS-L-elsbetiae_contig1529:8216..8412Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1529 8217..8412 +
1622815622.8625708-CDS-L-elsbetiae_contig1529:8838..90811622815622.8625708-CDS-L-elsbetiae_contig1529:8838..9081Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1529 8839..9081 +
1691682997.364063-CDS-L-elsbetiae_contig1529:8838..90811691682997.364063-CDS-L-elsbetiae_contig1529:8838..9081Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1529 8839..9081 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1529.3753.1

>prot_L-elsbetiae_contig1529.3753.1 ID=prot_L-elsbetiae_contig1529.3753.1|Name=mRNA_L-elsbetiae_contig1529.3753.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=321bp
MFVKKDTRKIPDILADDNDEREELHLGRRSSEFVSNGIKVVCSSRHTPRL
QKLQKLSLYDNMLSSVKGIGSLSATPLKHLNLGRNQLKSLPPELGKVGTL
ETLWADDNAITDFPRSVLQLKRLQELRLSGNRILEVPEEIAALSELRVLA
LDNNEIKTVPPSIGKLSRLESLLLRQNELEELPDEVGDLLGLRTLGISSN
RLVSLPTSLGKLALLEFLFANGNHLHSLPAELAGLMNLKKANLANNSIFA
IPVDVEAAWGRPDASTGKLDADTVGSPRKVEVVIRGNPITAEPKKVDASK
IGSGSEEAGQAVPAAMDETQ*
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mRNA from alignment at L-elsbetiae_contig1529:2835..9459+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1529.3753.1 ID=mRNA_L-elsbetiae_contig1529.3753.1|Name=mRNA_L-elsbetiae_contig1529.3753.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6625bp|location=Sequence derived from alignment at L-elsbetiae_contig1529:2835..9459+ (Laminarionema elsbetiae ELsaHSoW15)
GGTCAGTGGTGTGCTGCTGTGTAACAGCTCGAGGGAAACACCTGCAGCAG
CATGTTCGTGAAGAAAGACACAAGAAAGATCCCAGACATTCTTGCCGATG
ATAATGATGAGAGAGAAGAACTCCACCTGGGCCGAAGGTGTGAAAACTCG
TCTCTCGTGTTCAAATTTGAAATTGCCGAACGGGGACTCGACCACGCATC
TGTTCTTGCCGCGGGCCACCAGCCAGGCTTCGAGTAGTAGATGGACAGTG
GATCATCTTGTATTTGACAGCTGTCTTCAACAGGTGATCATTAGGTTCTC
TGTGTTCTGTAAGCACGCACACCACGATGTAGACTAGTCCACATGTATTT
ATCTACATAGGAGGTCCCGCCCTCTCTGCCCTGAGGATTCAGGCGAAGTC
TCTCCACACTACTGCTCGTGATGCGAGTTAGTGCTGATATGCGTCGTGGG
CCTGGCCGCCATCATCGATGATCATATACCACGTATCAATGTATATATAC
AGGAGCAGCAGAGCAGCGAGACAGAGAGGGTCTCCTGGAGGTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTGTGTGTGTGTCTCTCTCTCTCTGCTCTCTC
CAGAACTAAGACACATATGATAGATACCTACATACCAGCAGGCTGCTGGT
ATGCCAGATATACATGTCATACCATCACGTGATGGACGAAGACGAAGTCG
TTGCGGAGCAAAGCGCAGTAGAAGCGTGTGTTCAGGAGACGCGGAAGAGT
TCTGTGTCCCCGTGACGATGAACCACAAATACACACGGGTTCGTTGTAAT
CTAGACTATACAAAGCATCTATAGTAGATGTTACAAGTTCCCCTTTCAGA
CGTCGCTCGTGACCTTAACAATTCAGGGGGTGTTGATCGCTGTTCGAGTT
GCGCAACACTATGAGTTGCAGTGTCACACTAAAGAGCCAGAACTGGCGAC
GTCGCTACGTGCATCGCCAGCCTGAAAAGCCTAATGAAAAGCCTGGTTCC
AGTGCGTGGCTTGACCAACAGCTCATAGACCCTGCACCCAGGGAACACTC
AAAATCTGCATGTAGTCATTCAAAATTTCGGGCATGTTGCGCCGAAGATG
GGAAATTTATGGGTCTTATAAGAAGTGATCAGCCGAAGACCCTGTCTCCA
GAGACCCCGAGCGCTCCATGGCCGACCCTCGCTGCTGTCTACCCCAAGCG
TGCCCGCCCTCACTTTGCCGACACACGAAAATGTAGTTTGCTCGAAATAT
TTCAGTCGACCGCCCCGCATATTTCTCTCTATTCTGCAACCAGCAGTGAG
AGCTGCACTGCGATACCTCACGACAGCCAACCCCAAGGATTGACTGAGGC
ATTGTGGTATCGGTTCTTGTTTCAAAGAGCAAAAGTCGATTTTGCGATGA
GGGGGGGCAGCTGGAGAGAGATCTACGGCATTTGTGGGAGATGACAGAAA
ACCACTGAAAAAAACAAGTGTCGCTCCGGGCTCTCTCCTGGAACCCCTAC
CAGGGATTTCAAAGCTGGGAAACGTGATTTTACATTTTTCATGTATTGTA
CATACGTACAATACAACATATAATTTTCTCCCATTTCATGTTGTTCTCTT
TGTAGCCGCTGTTCTGTCTTGCTGGTGCATGGTGTGTGTTCTCACCTCGG
GGATGACGGCCATCTGTGGTTGGGTTGTGTAGGAATCCTAACCCCTCATC
CTTCATCCTTCATCCTTGTCGACGAACTACGTGCAATAAATACTCCTCGT
GTAATGTACGCTGGAAAAACTCATTATGTTTCATATTTTGGTAAATGTTT
CACATATTGTAACAAACGTTGTACTACAAGTAAATTTATGTACCTTTTAC
GTATCAATTTATGTTTTCTCGGTGTATGTATGTATGACTACGTATGTACA
ACAGACGGCTTACCTCTACAAGCTGGAATAGCAAGCAGCTCACAAAATGA
TTAGCATGGATTTGTACTTGAACGAGGGTCTTCGTAAATTTATTTCTGTT
TTTTGTCGGGGAATCAAGTCTGGGTGCGGCCTTCTTGCGCGCAGCAGCTG
TACCTCAAACGCACGTTAACGTTGTTTCCCGACAGGGAAAGAAAAAGAGG
CGGTATTTTTTTTTCTCCCCTCCCGCTCTCTCCTGTCCTTTGTCTTTCGC
TTCGCTGCCCTTTCCTCTGTCCACTCTACCACACCTACGAAGTATGTATG
GTACCCACTACACTACATTTTCTTCCACCCCGCGTTGTTTGCAGACTCGA
CGACCAATGAGAAAGAACAAGCACCGTAGTACAGCGGTACATTGTTTCCT
GTGTATTTTCCCCCTCTCTGTTGGGCAGGCACGCTTGGTCCATCTCAAGT
GTGCGTAGAAGAAGCCAGACGTGCAGCCGTAAAGCAATACTGCTGGGGCA
CTGGTTCTCCCTCCGGGCTCACTTCAATTTGCCAGAACTGATGTTCGTGT
GTGCTGGGAAATCAAATATCGACCAGTCTACCGAAACGCTGTCTGGCGTC
GCCGAATCGTGCCCAATCGCCCCGTCGGACCACGCACTCTTCAGCAGTAC
ACCGAACTCCGTTCGACGCACCAAGTTCGAGCCGATTGTAAATACCGCTG
TTGTTTGTTGGGTGCGTGCATGCAGGTCTTCAGAGTTCGTGTCGAACGGG
ATCAAGGTGGTATGCAGCAGCAGGCATACGCCACGACTCCAGAAGCTGCA
GAAGCTGTCGCTCTACGACAACATGCTATCCAGCGTAAAGGTACATACGT
ATGTATTTTGCACCTTTTGGGCTGGCCGCTTTCATTAAGGTCTGCGATAG
TCAGGAGCAGCAAATGCCAATGTCCTCTGATTCCCAAGCGTAGTCTAGTG
CCGTCTCGAGCGACCGATCACGACCGTGTTGTATTGTGTGCGAGACCACG
TTCACGCGCCTGGTCCACGTATTTATAGAAAAAGCAACGATAAGTCTCGC
ATGTATCTACCAGTCTGTCTGTGAAACGGCATGCTCAAAGTGCCAGTTTG
GTGGAAAACCACCTCGGCCTGCTCCTGCTCAAGTCGGCCACTTTCATGCA
GGCCACACCTAACGGCCTTTGAACCCCCGAGATGATGCCGATGGCATCGC
TCCTTTGTAGCCCATGCATCTCGCGCTATCTTCCACCTTGTCTCGCTTAA
AGCGTACTTCTACGTAGCAGACACCAGGGTTTGTGTGTATTACGGATCAT
GCTGGGGTAGTGCTGGTTGTTTTGGTCGTATTATTCATACGTCGCCGTGA
TTTTCGTCCGTTTTTGCCGCTACAGTACCATTTTTGCTTGGTGCAGAACA
CTTATTCGATCCAATGGATCCTAACTTTTTATGTCCCGTTCATGATAGGG
CATCGGGTCTCTCTCGGCGACACCGCTCAAGCACCTCAACTTGGGGCGCA
ATCAACTCAAATCTTTGCCTCCGGAGCTGGGCAAGGTGATACATACGTAT
TTATTTTTTCGCGCGCACCTGGTACAGTGTTCCTCTACAGTATGGAGATC
GCTGACGCTACAAGGGCATGTTTTGCGGAAACGCGTACTGTTGTAACCGG
GGGGTCATTTTTCGGCCTTAGTTCCCTCTGGGCGCAACCAAGCTAGAGGA
GAGTTCTGGGGCCTTTTACAGCAGGTCGAGCGAGACCTCGGGCGGCGAAG
GCATTTTCCGTACCTATTTACTTTCCTTCCCTTCCTGCTCGTTCCGTATC
ACGCATGCATACTTGCTCTGCCCGTGTTAACATCTAACCGACTGACTGCC
GTGCGGTGCTGTGCAGTGCTGTGCGAATCGTGTCTGGCTCGTAAAACGGC
CGGGATGAAACAAGTCCATCTTGCAGAACTTGCGGCCGGCCCAGACTGAT
AACCGTTTTTACCCTCCTGAACGGGTAACGTCGACCGTTACGAGTCCCAC
ATACTCGCTCCGCTTTTAGGCTCGGGGTCATGCCTGTGCGACCTTTATCA
TTGTCTGCCCGATCGACGAAATCCACGTAAATCGTGCCTCAAAATTGCGT
CATAGGTGGGAACGCTTGAGACGCTGTGGGCCGACGACAACGCCATCACG
GACTTCCCACGGTCGGTTTTGCAGCTCAAGTGAGTAGGCGCTCCTTGCTC
ACCCTCGCGAATGGGCGAGTATTGGTTGGTTGTCGATCCCAGTGTTAATG
AGAGGGCCCTCAGGTTCGTCGGATAAGCGAGTGGTGGGATGAAAATCGCC
ATTTCGTTTGGCCTCGGTCGTCAGGGTGAATATTTGGGATGGTATCCGCT
GTTCCCCACGTGCATGGGTGTAAGGAAACTGTACTTTTAGTAGACTAGTT
GATCATGTGGCCGTTCGACCAAAGACTGCGTATCCCTGCAAAGCCGGTAT
GGTGTGGTGTGGACTGGTATGGTGGCAGGAGCACGCCGGGTTTTCGCCAG
CCCAGGCTTACAAGCGTGTGCCGCATGTATTTGCCCGAAGTTTTCAATAC
TGTGTATACATTTCCTGCTGCAACCGCCGTCCTTGTTGTACACGCTGGCT
TTGTCTTCGCTGTGTCGCTCTCCACCCCACCGGGGTGACTGACCGGGCCA
CCAGGCGTCTGCAAGAGCTGCGGCTCAGCGGCAACCGGATATTGGAGGTG
AGGAGGGCACCCGTTGGTCTTGAAAATAACGACGGAGGATAGGGCACGTT
TAGCCGCAACAGACAGGCGGCCGGTGGTGCATTTGCCAGGTTAGGCTGAG
CACAGCAAACGTATGGTACACCCTAGTACCGTCCCCGGGAAGGTATTAAT
AGCCGCGATACCTTTCGCTTCGATGTACGCACACGTTTGTTTCCATCCGC
GATGTTCATCCTGCTCAACATCCTGAGACCTTCACGTGACTCCAGGTACC
GGAAGAGATTGCAGCCCTGTCGGAGCTGAGGGTGCTTGCTCTGGACAACA
ACGAGATCAAGACGGTGCCACCATCCATCGGCAAGCTCTCGCGGCTTGAG
TCCCTCCTGTTGAGGTGCGTTCCGTTCCGTCCTTACATTTCCGTCATGAC
CGGCACTCGGTCCATTGTTGTTGGAAAGGCGGGATGCAGACTGTGTGTGA
GAGAGTAGGCATGCCTCTGGCCCGGATAGGGTGGTAAATGGGAGTTTGCT
TGGTGTGCAACATGGCACTCTCGGAAGCTCAACAACGACTTTGTCGCCTA
AGCGCCTCGCACCAAAGCGTCACCCTCCTACAAGCGCGGTGGAGAGAGGG
AGCGGATAATCCAGGCGTTGACCCTATGTTGTTTGGGAGCCGGGTGTTTG
TTGTTTTATTCTTCCCAGGCCGTTAGAGATCAAGGGTGCGAAGAGGCGTG
TTGCCTTCATTCAGCTTAAGCCGGCACTCTCTCGACACGTTGCGCTATTT
TTTCCTCATTGAACGATTTCGATATTCGGCAGGCAAAATGAGCTAGAGGA
GCTGCCAGATGAAGTGGGCGACCTTCTCGGCCTGCGCACGCTCGGCATCA
GCAGCAACAGACTCGTCTCGCTGCCGACGTCGCTGGGAAAGCTGGCGCTG
CTCGAGTTCCTTTTCGCCAACGGCAACCATCTCCACTCCCTCCCCGCCGA
ACTGGCGGGGCTAATGAACCTCAAGAAGGTGAGCGCCATCCGTGTAAGAT
AGAGGAAAGGCAATGCGTGCACCTTGTGCTTTTGCCGGATATGTGTATGG
CGGCAGTGGTCTTGTTTCTGGGTTGTTTTCGGAAAAATTGTGTCGGTTGT
CTCAAAACGGAAGCAGTAGTTGGTGCCGTAGGCTCGCGCAGTTCCCTACC
AAAGTGTTCAAAAATGATTGATTTTCCACGCGGACAGCACAGTAGCGCAT
CGTGCGCACGGTTGTCCGGACGCGTCGTGTCACCGCCTCTTGCCTTCCTG
CCCACCCACCAATTTCTATTTTTTGTTCCAGTCCAAATTGAGAATAAATG
TTCGTTATTTTCCCTTGCAAGCTTCCATCCCTCCACCCCACGTTTTTAGT
AAATTTACCATCATCCCCCTCTCCCGGCCTATATCTGTCGGCAACCTCCC
ACAGGCCAACCTCGCGAATAACTCCATTTTTGCCATCCCTGTGGACGTGG
AAGCTGCATGGGGAAGGCCGGATGCCTCGACGGGAAAGCTCGACGCCGAC
ACGGTAGGGTCGCCGAGGAAGGTCGAGGTGGTGATTCGCGGTAACCCCAT
CACGGCGGAGCCTAAGAAAGTGGACGCCAGCAAGATCGGCAGCGGCAGCG
AAGAGGCGGGGCAGGCCGTTCCAGCGGCAATGGATGAGACCCAGTAGATG
TGTTCCGTAGAGGCTTGGGCCGGAGAGTATGTAAAAGTTTGTGTCAAAAG
AGTGACGTCACTTGGGTCGGGACGTAGCTTGAATTCCGAGCAGAGAAGAA
GGTTGCTGTTCACTCCGTCCGCCGTGGAATACTTCAGACACCGGCGGTGT
TGCTTGCAGGGGAAGGATACATTTGAACTCAGATTCACGCAGGGTTTGTC
TCCGGAATATTTTTGCTGATTCACTTGCCACAGCCGACCAAGGAGATACT
AAAATCTTTCTGATCAACCAACTGGAGTATCAGAAAGATTTTTTTTTGTA
TCTCCTCGGGCAGCTGGGGCAAGGGCGGCTGTGGCAAGTGAAATAGCAGC
AAAAATATTCTGGAGGCAAACCCTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1529:2835..9459+

>mRNA_L-elsbetiae_contig1529.3753.1 ID=mRNA_L-elsbetiae_contig1529.3753.1|Name=mRNA_L-elsbetiae_contig1529.3753.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1926bp|location=Sequence derived from alignment at L-elsbetiae_contig1529:2835..9459+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTTCGTGAAGAAAGACACAAGAAAGATCCCAGACATTCTTGCCGATGA
TAATGATGAGAGAGAAGAACTCCACCTGGGCCGAAGATGTTCGTGAAGAA
AGACACAAGAAAGATCCCAGACATTCTTGCCGATGATAATGATGAGAGAG
AAGAACTCCACCTGGGCCGAAGGTCTTCAGAGTTCGTGTCGAACGGGATC
AAGGTGGTATGCAGCAGCAGGCATACGCCACGACTCCAGAAGCTGCAGAA
GCTGTCGCTCTACGACAACATGCTATCCAGCGTAAAGGTCTTCAGAGTTC
GTGTCGAACGGGATCAAGGTGGTATGCAGCAGCAGGCATACGCCACGACT
CCAGAAGCTGCAGAAGCTGTCGCTCTACGACAACATGCTATCCAGCGTAA
AGGGCATCGGGTCTCTCTCGGCGACACCGCTCAAGCACCTCAACTTGGGG
CGCAATCAACTCAAATCTTTGCCTCCGGAGCTGGGCAAGGGCATCGGGTC
TCTCTCGGCGACACCGCTCAAGCACCTCAACTTGGGGCGCAATCAACTCA
AATCTTTGCCTCCGGAGCTGGGCAAGGTGGGAACGCTTGAGACGCTGTGG
GCCGACGACAACGCCATCACGGACTTCCCACGGTCGGTTTTGCAGCTCAA
GTGGGAACGCTTGAGACGCTGTGGGCCGACGACAACGCCATCACGGACTT
CCCACGGTCGGTTTTGCAGCTCAAGCGTCTGCAAGAGCTGCGGCTCAGCG
GCAACCGGATATTGGAGGCGTCTGCAAGAGCTGCGGCTCAGCGGCAACCG
GATATTGGAGGTACCGGAAGAGATTGCAGCCCTGTCGGAGCTGAGGGTGC
TTGCTCTGGACAACAACGAGATCAAGACGGTGCCACCATCCATCGGCAAG
CTCTCGCGGCTTGAGTCCCTCCTGTTGAGGTACCGGAAGAGATTGCAGCC
CTGTCGGAGCTGAGGGTGCTTGCTCTGGACAACAACGAGATCAAGACGGT
GCCACCATCCATCGGCAAGCTCTCGCGGCTTGAGTCCCTCCTGTTGAGGC
AAAATGAGCTAGAGGAGCTGCCAGATGAAGTGGGCGACCTTCTCGGCCTG
CGCACGCTCGGCATCAGCAGCAACAGACTCGTCTCGCTGCCGACGTCGCT
GGGAAAGCTGGCGCTGCTCGAGTTCCTTTTCGCCAACGGCAACCATCTCC
ACTCCCTCCCCGCCGAACTGGCGGGGCTAATGAACCTCAAGAAGGCAAAA
TGAGCTAGAGGAGCTGCCAGATGAAGTGGGCGACCTTCTCGGCCTGCGCA
CGCTCGGCATCAGCAGCAACAGACTCGTCTCGCTGCCGACGTCGCTGGGA
AAGCTGGCGCTGCTCGAGTTCCTTTTCGCCAACGGCAACCATCTCCACTC
CCTCCCCGCCGAACTGGCGGGGCTAATGAACCTCAAGAAGGCCAACCTCG
CGAATAACTCCATTTTTGCCATCCCTGTGGACGTGGAAGCTGCATGGGGA
AGGCCGGATGCCTCGACGGGAAAGCTCGACGCCGACACGGTAGGGTCGCC
GAGGAAGGTCGAGGTGGTGATTCGCGGTAACCCCATCACGGCGGAGCCTA
AGAAAGTGGACGCCAGCAAGATCGGCAGCGGCAGCGAAGAGGCGGGGCAG
GCCGTTCCAGCGGCAATGGATGAGACCCAGTAGGCCAACCTCGCGAATAA
CTCCATTTTTGCCATCCCTGTGGACGTGGAAGCTGCATGGGGAAGGCCGG
ATGCCTCGACGGGAAAGCTCGACGCCGACACGGTAGGGTCGCCGAGGAAG
GTCGAGGTGGTGATTCGCGGTAACCCCATCACGGCGGAGCCTAAGAAAGT
GGACGCCAGCAAGATCGGCAGCGGCAGCGAAGAGGCGGGGCAGGCCGTTC
CAGCGGCAATGGATGAGACCCAGTAG
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