mRNA_L-elsbetiae_contig15285.3749.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15285.3749.1 vs. uniprot
Match: D7G4Y8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y8_ECTSI) HSP 1 Score: 188 bits (478), Expect = 1.130e-54 Identity = 94/168 (55.95%), Postives = 125/168 (74.40%), Query Frame = 3 Query: 87 SLNCDRRILAFVLVAFLAAGNAVARARLALRRFLPPNASPLPDITSTGGFSSLTEQEIWIVSSIFPFLVSTIFEDSTSLKLHVRSSVVKEVAERIGVNLATASGPLQVCGAFKDLIKACSWSSFVIRAPSFIPDELRVLRKSEKEQIKQASLVMGVQLGTFHEGLHIS 590 +LN ++I+ FVL A +AG+ + R R A RR LPPN SP+ DITS GG+++LT Q++W+VSSIFPFLV+ IF L +VR+ VV EVA+RI VN T +G VC AF+DLIKACSWSSFV+R+PSF + LR L+KS+ +Q+KQ + VMGV LG+ H+GLHI+ Sbjct: 128 ALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALGSIHKGLHIA 295
BLAST of mRNA_L-elsbetiae_contig15285.3749.1 vs. uniprot
Match: D7FZI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI4_ECTSI) HSP 1 Score: 188 bits (478), Expect = 7.720e-54 Identity = 94/168 (55.95%), Postives = 125/168 (74.40%), Query Frame = 3 Query: 87 SLNCDRRILAFVLVAFLAAGNAVARARLALRRFLPPNASPLPDITSTGGFSSLTEQEIWIVSSIFPFLVSTIFEDSTSLKLHVRSSVVKEVAERIGVNLATASGPLQVCGAFKDLIKACSWSSFVIRAPSFIPDELRVLRKSEKEQIKQASLVMGVQLGTFHEGLHIS 590 +LN ++I+ FVL A +AG+ + R R A RR LPPN SP+ DITS GG+++LT Q++W+VSSIFPFLV+ IF L +VR+ VV EVA+RI VN T +G VC AF+DLIKACSWSSFV+R+PSF + LR L+KS+ +Q+KQ + VMGV LG+ H+GLHI+ Sbjct: 233 ALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALGSIHKGLHIA 400
BLAST of mRNA_L-elsbetiae_contig15285.3749.1 vs. uniprot
Match: D7FWW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW9_ECTSI) HSP 1 Score: 184 bits (468), Expect = 3.530e-52 Identity = 92/168 (54.76%), Postives = 124/168 (73.81%), Query Frame = 3 Query: 87 SLNCDRRILAFVLVAFLAAGNAVARARLALRRFLPPNASPLPDITSTGGFSSLTEQEIWIVSSIFPFLVSTIFEDSTSLKLHVRSSVVKEVAERIGVNLATASGPLQVCGAFKDLIKACSWSSFVIRAPSFIPDELRVLRKSEKEQIKQASLVMGVQLGTFHEGLHIS 590 +LN ++I+ FV+ A AG+ + RAR A R LPPN SP+ DITS GG+S+LT Q++W+VSS FPFL++ IF +L +VR+ VV EVA+RI V+ T +G VC AF+DL+KACSWS FV+R+PSF + LR L+KS+ EQ+KQA+ VMGV LGT H+GLHI+ Sbjct: 139 ALNSGKKIMGFVMDALDPAGSEIVRARFAWCRMLPPNVSPMADITSAGGWSALTGQQLWLVSSSFPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVDPGTPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLRALQKSQLEQVKQATRVMGVALGTIHKGLHIA 306
BLAST of mRNA_L-elsbetiae_contig15285.3749.1 vs. uniprot
Match: D7FSA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA9_ECTSI) HSP 1 Score: 172 bits (435), Expect = 1.110e-49 Identity = 90/170 (52.94%), Postives = 121/170 (71.18%), Query Frame = 3 Query: 87 SLNCDRRILAFVLVAFLAAGNAVARARLALRRFLPPNASPLPDITSTGGFSSLTEQEIWIVSSIFPFLVSTIFEDSTSLKLHVRSSVVKEVAERIGVNLATASGPLQVCGAFKDLIKACSWSSFVIRAPSFIPDELRVLRKSEKEQI--KQASLVMGVQLGTFHEGLHIS 590 +LN ++I+ FVL A +A + + R R A RR LP N P+ DITS GG+++LT Q++W+VSSIFPFLV+ IF L +VR+ VV EVA+RI VN T +G VC AF+DLIKACSWSSFV+R+PSF + L L+KS+ +Q+ KQ + VMGV LG+ H+GLHI+ Sbjct: 9 ALNAGKKIMTFVLDALDSAVSEIVRGRFAWRRMLPQNVLPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDVNSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLGTLQKSQIDQVQVKQVTRVMGVALGSIHKGLHIA 178
BLAST of mRNA_L-elsbetiae_contig15285.3749.1 vs. uniprot
Match: A0A6H5K975_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K975_9PHAE) HSP 1 Score: 154 bits (390), Expect = 7.420e-41 Identity = 81/168 (48.21%), Postives = 113/168 (67.26%), Query Frame = 3 Query: 87 SLNCDRRILAFVLVAFLAAGNAVARARLALRRFLPPNASPLPDITSTGGFSSLTEQEIWIVSSIFPFLVSTIFEDSTSLKLHVRSSVVKEVAERIGVNLATASGPLQVCGAFKDLIKACSWSSFVIRAPSFIPDELRVLRKSEKEQIKQASLVMGVQLGTFHEGLHIS 590 +LN ++I+ FV+ A AG+ + +PDITS GG S+LT Q++W+VSSI PFL++ IF +L +VR+ VV EVA+RI V T +G VC AF+DL+KACSWS FV+R+PSF + L VL+KS++EQ+KQA+ V+GV LGT H+GLHI+ Sbjct: 77 ALNSGKKIMGFVMDALDPAGSEI-----------------VPDITSAGGRSALTGQQLWLVSSIVPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVEPGTPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLHVLQKSQQEQVKQATRVIGVALGTIHKGLHIT 227
BLAST of mRNA_L-elsbetiae_contig15285.3749.1 vs. uniprot
Match: A0A6H5KR91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR91_9PHAE) HSP 1 Score: 136 bits (342), Expect = 2.000e-35 Identity = 75/168 (44.64%), Postives = 105/168 (62.50%), Query Frame = 3 Query: 87 SLNCDRRILAFVLVAFLAAGNAVARARLALRRFLPPNASPLPDITSTGGFSSLTEQEIWIVSSIFPFLVSTIFEDSTSLKLHVRSSVVKEVAERIGVNLATASGPLQVCGAFKDLIKACSWSSFVIRAPSFIPDELRVLRKSEKEQIKQASLVMGVQLGTFHEGLHIS 590 +LN D++I+ F++ A AG+ + RAR A RR LPPN SP+ DIT IFPFL++ IF +L +VR+ VV EVA+RI V T +G VC F+ L+KACSWS F +R+ S + VL++S++EQ+KQA+ V+GV LGT H+GLHI+ Sbjct: 8 ALNSDKKIVGFLMDARDPAGSEIVRARFAWRRMLPPNVSPIADITH-----------------IFPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVEPDTPAGKEAVCNTFQYLVKACSWSCFEVRSQSLTAEGFHVLQQSQQEQVKQATRVIGVALGTIHKGLHIA 158
BLAST of mRNA_L-elsbetiae_contig15285.3749.1 vs. uniprot
Match: A0A6H5JWC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWC7_9PHAE) HSP 1 Score: 139 bits (351), Expect = 3.440e-35 Identity = 75/168 (44.64%), Postives = 106/168 (63.10%), Query Frame = 3 Query: 87 SLNCDRRILAFVLVAFLAAGNAVARARLALRRFLPPNASPLPDITSTGGFSSLTEQEIWIVSSIFPFLVSTIFEDSTSLKLHVRSSVVKEVAERIGVNLATASGPLQVCGAFKDLIKACSWSSFVIRAPSFIPDELRVLRKSEKEQIKQASLVMGVQLGTFHEGLHIS 590 +LN ++I+ FV+ A AG+ + RAR GG S+LT Q++W+V SIFPFL++ IF +L +VR+ V EVA+RI V T +G VC AF+DL+KACSWS FV+R+PSF + L VL+ S++EQ+KQA+ V+ V LGT H+GL I+ Sbjct: 8 ALNSGKKIMGFVMDALDPAGSEIVRAR-------------------AGGGSALTSQQLWLVPSIFPFLLAPIFSSPDNLGRYVRAMVAMEVADRISVEPVTPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLHVLQNSQQEQVKQATRVIRVALGTIHKGLDIA 156
BLAST of mRNA_L-elsbetiae_contig15285.3749.1 vs. uniprot
Match: A0A6H5LGI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGI1_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 6.270e-20 Identity = 53/106 (50.00%), Postives = 72/106 (67.92%), Query Frame = 3 Query: 6 PLMKIIAKLQAGARADIATGDKQTMSDSLNCDRRILAFVLVAFLAAGNAVARARLALRRFLPPNASPLPDITSTGGFSSLTEQEIWIVSSIFPFLVSTIFEDSTSL 323 PLMKII +LQ G +A+I+ G K T++ I+ FV+ A AG+ + RAR A RR LP N SP+ DITS GG+S+LT Q++WIVSSIFPFL++ +F +L Sbjct: 579 PLMKIIRRLQNGCKAEISVGTKLTVT--------IMGFVMDALDPAGSDIVRARFAWRRMLPRNVSPIADITSAGGWSALTGQQLWIVSSIFPFLLAPMFSSPDNL 676
BLAST of mRNA_L-elsbetiae_contig15285.3749.1 vs. uniprot
Match: A0A6H5KPX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX4_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 2.850e-16 Identity = 45/97 (46.39%), Postives = 60/97 (61.86%), Query Frame = 3 Query: 33 QAGARADIATGDKQTMSDSLNCDRRILAFVLVAFLAAGNAVARARLALRRFLPPNASPLPDITSTGGFSSLTEQEIWIVSSIFPFLVSTIFEDSTSL 323 Q+ AR T +LN ++I+ FV+ A G V RAR A RR LPPN SP+ DITS GG S+LT Q++W+V+SIFPFL++ IF +L Sbjct: 166 QSDARITSQAACALTGESALNSGKKIMGFVMDALDPTGTEVVRARFAWRRMLPPNVSPIADITSAGGRSALTGQQLWLVASIFPFLLAPIFSSPDNL 262
BLAST of mRNA_L-elsbetiae_contig15285.3749.1 vs. uniprot
Match: A0A6H5KLJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLJ8_9PHAE) HSP 1 Score: 55.5 bits (132), Expect = 6.930e-7 Identity = 28/56 (50.00%), Postives = 37/56 (66.07%), Query Frame = 3 Query: 438 ACSWSSFVIRAPSFIPDELRVLRKSEKE-----QIKQASLVMGVQLGTFHEGLHIS 590 ACSWS FV+R+PS + L VL KS ++KQA+ V+GV LGT H+GL I+ Sbjct: 2 ACSWSCFVVRSPSCTAEGLHVLHKSHNPYTTAVEVKQATRVIGVALGTIHKGLEIA 57 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15285.3749.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15285.3749.1 >prot_L-elsbetiae_contig15285.3749.1 ID=prot_L-elsbetiae_contig15285.3749.1|Name=mRNA_L-elsbetiae_contig15285.3749.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=193bp MKIIAKLQAGARADIATGDKQTMSDSLNCDRRILAFVLVAFLAAGNAVARback to top mRNA from alignment at L-elsbetiae_contig15285:563..2898- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15285.3749.1 ID=mRNA_L-elsbetiae_contig15285.3749.1|Name=mRNA_L-elsbetiae_contig15285.3749.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2336bp|location=Sequence derived from alignment at L-elsbetiae_contig15285:563..2898- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15285:563..2898- >mRNA_L-elsbetiae_contig15285.3749.1 ID=mRNA_L-elsbetiae_contig15285.3749.1|Name=mRNA_L-elsbetiae_contig15285.3749.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1158bp|location=Sequence derived from alignment at L-elsbetiae_contig15285:563..2898- (Laminarionema elsbetiae ELsaHSoW15)back to top |