mRNA_L-elsbetiae_contig15283.3747.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15283.3747.1 vs. uniprot
Match: UPI00146A6B1F (hypothetical protein n=1 Tax=Sneathiella chinensis TaxID=349750 RepID=UPI00146A6B1F) HSP 1 Score: 175 bits (444), Expect = 3.130e-48 Identity = 117/263 (44.49%), Postives = 159/263 (60.46%), Query Frame = 1 Query: 1 FNDASDVENFASTFTLDAPVEDSDQDLGDATITVTAQDKTDPTVKSEASETAPVVVDAVLDEAGSAKQEETVTEDESDQPQEIGLGLTLDFVDAGFDGSLDGESDTDGSEEITDVTVT-----IDAGT-LELGANAPAGAELRENPDGSFTLEVEDPADYGAAIAALQVEVEAGFDGEVNGTISVTTQETVPNSDGETDTSDNSHTTENGFTVTVDPVAGDPSTEFTTVDADGNL--VLKEDATDTEVGFKAEVGDATDELTS 765 FND++D+E+F+S+FTLDAPVEDSD DL ATIT A+DKTD T + ET +VVDAVLD + + ESD Q + LGL + F +GF + DTDGSE T +TVT + AG L LGA AP+ A L E PDG++TL V DPAD A+ ++ V AG++G +NG+IS ++ET+PN+D E +DN F++T++ P+ F DG ++KED+ D + F A GD+TDELTS Sbjct: 208 FNDSADLESFSSSFTLDAPVEDSDADLS-ATITAYAKDKTDATETGDGGETKTIVVDAVLDRFADVEGGAAASGTESDTVQNLNLGLGMQFAASGFTPTDSTPDDTDGSETFT-ITVTLHGTAVTAGVGLVLGAGAPSDATLTEGPDGTWTLNVSDPADLEVAVGLIEAVVPAGYEGTINGSISSVSEETLPNNDEEDTLADNRKEDSADFSLTIEGGEVVPTAAF----GDGEFAGIIKEDSVDNTINFSAASGDSTDELTS 464
BLAST of mRNA_L-elsbetiae_contig15283.3747.1 vs. uniprot
Match: UPI0018733476 (FecR domain-containing protein n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI0018733476) HSP 1 Score: 173 bits (439), Expect = 1.210e-45 Identity = 124/262 (47.33%), Postives = 153/262 (58.40%), Query Frame = 1 Query: 1 FNDASDVENFASTFTLDAPVEDSDQDLGDATITVTAQDKTDPTVKSEASETAPVVVDAVLDEAGSAKQEETVTEDESDQPQEIGLGLTLDFVDAGFDGSLDGESDTDGSEEITDVTVTIDAGTLELGANAPAGAELRENPDGSFTLEVEDPADYGAAIAALQVEVEAGFDGEVNGTISVTTQETVPNSDGETDTSDNSHTTENGFTVTVDPVAGDPSTEF------TTVDADGNLV-LKEDATDTEVGFKAEVGDATDELTS 765 F+ D++ FAS+FTLDAP + SD DL IT TAQD DPT AS + +V+DAVLDEA Q + T E+ Q+I L L+L + GFD S D DGSE IT+VTV + AG+L LGA APAG+ + N GSFTL V +PADY A+AALQVEV AG DGEV GTI VTT E P S E ++DNS T + F+V V PS F + A + + ED+ D +GF GD TDEL S Sbjct: 501 FDITQDIQVFASSFTLDAPEDGSDVDLPGIKITATAQDLLDPTKMGSASASGTLVLDAVLDEAALPSQGASATVSEAAAAQDIPLDLSLSIIPTGFDSS---GPDGDGSEAITNVTVVLSAGSLVLGAGAPAGSSIISNGGGSFTLLVANPADYADAVAALQVEVPAGLDGEVTGTIYVTTAEFSP-SGAEAQSADNSLTLDADFSVMVTAGEVAPSASFGFPEGVVLLGAPAAITTILEDSEDNVIGFSVAAGDPTDELVS 758
BLAST of mRNA_L-elsbetiae_contig15283.3747.1 vs. uniprot
Match: UPI00146D5A6D (hypothetical protein n=1 Tax=Sneathiella chinensis TaxID=349750 RepID=UPI00146D5A6D) HSP 1 Score: 164 bits (415), Expect = 1.470e-43 Identity = 115/268 (42.91%), Postives = 157/268 (58.58%), Query Frame = 1 Query: 1 FNDASDVENFASTFTLDAPVEDSDQDLGDATITVTAQDKTDPTVKSEASETAPVVVDAVLDEAGSAKQEETVTEDESDQPQEIGLGLTLDFVDAGFDGSLDGESDT-----DGSEEITDVTVTID-----AGT-LELGANAPAGAELRENPDGSFTLEVEDPADYGAAIAALQVEVEAGFDGEVNGTISVTTQETVPNSDGETDTSDNSHTTENGFTVTVDPVAGDPSTEFTTVDADGNL--VLKEDATDTEVGFKAEVGDATDELTS 765 FND++D+E+F+S+FTLDAPVEDSD DL ATIT A+DKTD T + ET +VVDAVLD +E ES Q + LGL+++F G+ D +DT DGSE T +TVT+D AG L LG +AP+ A L E P G++TL PAD AA+ ++ + AG++G +NGTIS +++T P ETD SDN F++T++ P+ F DG ++KED+ D + F A GD+TDELTS Sbjct: 254 FNDSADLESFSSSFTLDAPVEDSDADLS-ATITAYAKDKTDATATGDGGETKTIVVDAVLDRYAEVSADELAPGTESAADQNVNLGLSMEFEVTGYGAPSDQPADTTSDDTDGSETFT-ITVTLDGTAVTAGVGLVLGDDAPSDATLTEGPGGTWTLTANTPADLAAAVNDIEAVIPAGYEGTINGTISSVSEDTAPGG-VETDLSDNKEEDSADFSLTIEGGEVVPTAAF----GDGEFAGIIKEDSVDNTINFSAASGDSTDELTS 514
BLAST of mRNA_L-elsbetiae_contig15283.3747.1 vs. uniprot
Match: UPI00146D57BF (type I secretion C-terminal target domain-containing protein n=1 Tax=Sneathiella chinensis TaxID=349750 RepID=UPI00146D57BF) HSP 1 Score: 98.6 bits (244), Expect = 1.120e-19 Identity = 86/220 (39.09%), Postives = 127/220 (57.73%), Query Frame = 1 Query: 1 FNDASDVENFASTFTLDAPVEDSDQDLGDATITVTAQDKTDPTVKSEASETAPVVVDAVLDEAGSAKQEETVTEDESDQ-PQEIG-LGLTLD---FVDAGFDGSLDGESDTDGSEEITDVTVTIDAGTLELGANAPAGAELRENPDGSFTLEVEDPADYGAAIAALQVEVEAGFDGEVNGTISVTTQE------TVPNSDGETDTSDNSHTTENGFTVTV 627 FN+++D+E+F+S+FTLDAPVEDSD DL ATIT A+DKTD T ET +VVDAVLD A + + ++ +++ P +IG L L+ F ++ +G+ G +D DGSE +T + V ++ G LG PAG + +FT ED A + + + + V GF+G+V +I TT+E TV S E D +DN+ + EN TVT+ Sbjct: 64 FNNSADLESFSSSFTLDAPVEDSDADLS-ATITAYAKDKTDATETGNGGETKTIVVDAVLDYAVNVGGDAAISVVQANNDPIDIGDLSAVLNPAGFANSTTNGTDFGGADGDGSELVT-MVVEVNQGA-SLGWTLPAGISVSGTGPWTFTGTTEDIAGWNSLVDSFNVTTTPGFNGDVTVSIKTTTEEANTPDGTVVGSGVEDDIADNT-SEENVHTVTI 279
BLAST of mRNA_L-elsbetiae_contig15283.3747.1 vs. uniprot
Match: UPI001872F083 (type I secretion C-terminal target domain-containing protein n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI001872F083) HSP 1 Score: 76.6 bits (187), Expect = 3.670e-12 Identity = 86/257 (33.46%), Postives = 118/257 (45.91%), Query Frame = 1 Query: 37 TFTLDAPVEDSDQDL-----GDATITVTAQDKTDPTVKSEASETAPVVVDAVLDEAGSAKQEETVTEDESDQPQEIGLGLTLDFVDAGFDGSLDGESDTDGSEEITDVTVTIDAGTLELGANAPAGAELRENPDGSFTLEV--EDPADYGAAIAALQVEVEAGFDGEVNGTISVTTQETV----PN--SDGETDTSDNSHTTENGFTVTVDPVAGDPSTEFTTVDADGN-LVLKEDAT-DTEVGFKAEVGDATDELT 762 T TL P DSD D+ D +++ T D S T V VDAV+D GS + D ++ L + L G G +DTDGSE +T+V VT+ G L GA + ENP G++T + E AD + + +L V AGFDG V+ T+ TT E PN S E D DN F VTVDP P+ + VD +GN +KED + + +V ++ D DE+T Sbjct: 1894 TVTLTPPA-DSDADVFNELAADLSVSATVADPDSGDTASSGPVTIDVNVDAVVD--GSEVTQTAAASGNEDTEIDLNLAIALGGDSTTGPGESQGGTDTDGSESVTEVVVTLSTGELGWTLAGTIGAPV-ENPAGTWTFDTAGESLADVQSLVDSLTVTPPAGFDGTVDVTVVTTTAEAATEAGPNGGSGVECDDDDNVDVDTYTFEVTVDPTVTPPTVD---VDLEGNEACIKEDGSVEFDVTVTSQDDDVIDEVT 2143
BLAST of mRNA_L-elsbetiae_contig15283.3747.1 vs. uniprot
Match: A0A812R6R9_SYMMI (FrpA protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812R6R9_SYMMI) HSP 1 Score: 69.3 bits (168), Expect = 1.110e-9 Identity = 82/251 (32.67%), Postives = 108/251 (43.03%), Query Frame = 1 Query: 22 ENFASTFTLDAPVE---DSDQDLGDATITVTAQDKTDPTVKSEASETAPVVVDAVLDEAGSAKQEETVTEDESDQPQEIGLGLTLDFVD-----AGFDGSLD-----GESDTDGSEEITDVTVTIDAGTLELGANAPAGAELRE---NPDGSFTLEVEDPA--DYGAAIAALQVEVEAGFDGEVNGTISVTTQETV------PNSDGETDTSDNSHTTENGFTVTVDPVAGDPSTEFTTVDADGNLVLKED 702 +N T TL P D +LGD ++V+A K V + A PV +D +D + D+ I L L +D AG D D G +DTDGSE IT V VT+ G ELG P ++ P G++T + + A + +L V AGFDGE+ T+ TT E P SD E D SDN FTVTV+P P T T+ +G LKED Sbjct: 1709 QNVVFTVTLTPPANSDVDVRSELGDD-LSVSATAKDGVLVSAPAG---PVTIDVDVDAVVDGSEVTQTGPASGDEDTTIALELAIDLGGDSTSLAGADPDTDQPATQGGTDTDGSESITQVVVTLSEG--ELGWTLPVSGDIAAPVVGPAGTWTFDTSGAPLEEVQALVKSLSVTPPAGFDGEIAVTVETTTAEAATEGGPNPGSDKECDESDNVDVDVYPFTVTVNPTTEPPET---TLGVEGGGCLKED 1950
BLAST of mRNA_L-elsbetiae_contig15283.3747.1 vs. uniprot
Match: A0A0M2R567_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Kiloniella litopenaei TaxID=1549748 RepID=A0A0M2R567_9PROT) HSP 1 Score: 62.4 bits (150), Expect = 1.410e-7 Identity = 52/151 (34.44%), Postives = 73/151 (48.34%), Query Frame = 1 Query: 157 PVVVDAVLDEA----GSAKQEETVTEDESDQPQEIGLGLTLDFVDAGFDGS----------LDGESDTDGSEEITDVTVTIDAGTLELGANAPAGAELRENPDGS-FTLEVEDPADYGAAIAALQVEVEAGFDGEVNGTISVTTQETVPNS 564 P+ VDAV+D + GSA + I L LTL G+ + G +DTDGSE +T + VT+D+GTL AN+ A + P G+ +T D A A +A +V +GFDG +NGTI+ TT + P S Sbjct: 246 PITVDAVVDGSEVTQGSASGSDNAA---------IDLDLTLSLGGDSTTGTSVPVDPDQADVQGGTDTDGSENVTKIVVTLDSGTL---ANSAGVAYAPDTPGGTTWTFSPADQAAAEALVAGFKVNPVSGFDGTINGTITTTTVDGTPGS 384 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15283.3747.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15283.3747.1 >prot_L-elsbetiae_contig15283.3747.1 ID=prot_L-elsbetiae_contig15283.3747.1|Name=mRNA_L-elsbetiae_contig15283.3747.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=255bp FNDASDVENFASTFTLDAPVEDSDQDLGDATITVTAQDKTDPTVKSEASEback to top mRNA from alignment at L-elsbetiae_contig15283:3467..4231+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15283.3747.1 ID=mRNA_L-elsbetiae_contig15283.3747.1|Name=mRNA_L-elsbetiae_contig15283.3747.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=765bp|location=Sequence derived from alignment at L-elsbetiae_contig15283:3467..4231+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15283:3467..4231+ >mRNA_L-elsbetiae_contig15283.3747.1 ID=mRNA_L-elsbetiae_contig15283.3747.1|Name=mRNA_L-elsbetiae_contig15283.3747.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1530bp|location=Sequence derived from alignment at L-elsbetiae_contig15283:3467..4231+ (Laminarionema elsbetiae ELsaHSoW15)back to top |