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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1457 |
| Cds size | 789 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815621.8372903-UTR-L-elsbetiae_contig15278:201..868 | 1622815621.8372903-UTR-L-elsbetiae_contig15278:201..868 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig15278 202..868 + |
| 1691682996.7783089-UTR-L-elsbetiae_contig15278:201..868 | 1691682996.7783089-UTR-L-elsbetiae_contig15278:201..868 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig15278 202..868 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815621.8535302-CDS-L-elsbetiae_contig15278:868..1657 | 1622815621.8535302-CDS-L-elsbetiae_contig15278:868..1657 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig15278 869..1657 + |
| 1691682996.7887-CDS-L-elsbetiae_contig15278:868..1657 | 1691682996.7887-CDS-L-elsbetiae_contig15278:868..1657 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig15278 869..1657 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15278.3742.1 >prot_L-elsbetiae_contig15278.3742.1 ID=prot_L-elsbetiae_contig15278.3742.1|Name=mRNA_L-elsbetiae_contig15278.3742.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=263bp
MNRHLMYILCPILDTLLLLSSVKDSEGGGSQATAGTFGPYREDLDECDSD
EDHGSHGSIGALSRDDSDSDEDQVSKGSMDASSGGDSDSDDDHGSHGHGD
IGSLPPREDPRFVRQMDMLHIDPSEAQVADAMEAAEPRNREATLAAENAQ
RLEELAVDPPPPTVEDVVREMEELTVGDQQVVRIGNPGAVDPEAEVHAAG
RSINAEETAEERQAREMREMAYIDRRRQEEQRETFRTRLVRETAVHAVIE
AGLAQGDNAPSIE back to topmRNA from alignment at L-elsbetiae_contig15278:202..1657+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig15278.3742.1 ID=mRNA_L-elsbetiae_contig15278.3742.1|Name=mRNA_L-elsbetiae_contig15278.3742.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1456bp|location=Sequence derived from alignment at L-elsbetiae_contig15278:202..1657+ (Laminarionema elsbetiae ELsaHSoW15)
AAGCAGGGGACGCTACCGGGCCACTGATCGTGGCCTACCTTAAACGCTTC
TCTCTCTGTCATTTTGTTTGTATTGCATCCTCTCTTACCTTCGACTATTA
TTCCGAGTATAGCAGGCCGTAACCTCTTCGTTTTGCCGCGATCAACATTA
TGCCATGCGTCGGTGCATTTCTATGAGGCTATCTTTCCGAGAGAAGAGGA
CCGCCTCCTTTGTGTTGGGTGCCTTACTACTCGCGCTGCCCGCTATCCGC
ACAGTGTTCCCTCTCTCCTCAAGTCCATGTTGTTCGCCATCTTGTGTGCG
TTATCTGGGGTTGATGATATATATGTACACAGTAGTTTTCATATTCAAAT
ATTTAAACGGAACATGTAGGTATCTTGAGACTAAAAAACATTTCCCCACT
CATACAATACAACTCCACCACTCAGGCATCCGTCCTGTTCAAAAGCGTTA
CACTCTACAATACCTTGGACTCGCTCACAATAAGCGGGGGCGCGCTAGCG
CCCAAGACCTTCTACTTACGTCGTATTGTTCAACTCTCCCACATGCATAA
TAGATTCGCTGCTTTGCTGTCAGTACCACAGCTTTAGACGTCATCTCAAG
TCGAAAATTTGAAGTAAGATATAGTACATTTTATTCGAGTCTCGGATGTC
TATTTTGACTGCGCACCATGAACAGACACTTGATGTATATTTTGTGCCCG
ATTCTTGATACGCTGCTTCTGCTGTCATCGGTAAAGGACAGCGAGGGTGG
GGGGTCGCAAGCGACGGCAGGGACGTTTGGCCCGTATAGGGAAGATCTCG
ACGAGTGCGACAGTGACGAGGATCATGGCTCCCACGGCAGCATTGGTGCC
CTCTCTCGCGACGACAGTGACAGCGACGAGGATCAGGTCTCCAAAGGCAG
CATGGATGCCTCCTCTGGCGGCGATAGCGATAGCGACGACGATCATGGCT
CCCACGGCCACGGCGACATTGGTTCCCTCCCACCTCGTGAGGACCCAAGA
TTCGTGCGACAGATGGATATGCTTCACATCGACCCCTCGGAGGCACAAGT
TGCTGATGCAATGGAAGCAGCAGAACCCCGAAACAGGGAAGCCACGCTCG
CGGCCGAGAATGCGCAGCGCCTCGAAGAGTTGGCCGTTGACCCGCCGCCG
CCAACTGTCGAAGATGTCGTGCGCGAAATGGAAGAGCTGACCGTCGGAGA
CCAGCAGGTGGTCCGGATCGGCAATCCTGGCGCAGTCGACCCCGAGGCCG
AGGTCCATGCCGCCGGAAGGTCGATAAATGCGGAGGAAACTGCTGAGGAA
CGGCAGGCGCGGGAGATGCGGGAAATGGCCTACATTGACCGCCGTCGTCA
AGAGGAACAACGCGAGACGTTTCGCACACGGCTGGTCCGGGAGACAGCAG
TGCATGCGGTGATCGAGGCCGGACTCGCGCAAGGAGACAACGCGCCTTCG
ATCGAA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig15278:202..1657+ >mRNA_L-elsbetiae_contig15278.3742.1 ID=mRNA_L-elsbetiae_contig15278.3742.1|Name=mRNA_L-elsbetiae_contig15278.3742.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1578bp|location=Sequence derived from alignment at L-elsbetiae_contig15278:202..1657+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAACAGACACTTGATGTATATTTTGTGCCCGATTCTTGATACGCTGCT
TCTGCTGTCATCGGTAAAGGACAGCGAGGGTGGGGGGTCGCAAGCGACGG
CAGGGACGTTTGGCCCGTATAGGGAAGATCTCGACGAGTGCGACAGTGAC
GAGGATCATGGCTCCCACGGCAGCATTGGTGCCCTCTCTCGCGACGACAG
TGACAGCGACGAGGATCAGGTCTCCAAAGGCAGCATGGATGCCTCCTCTG
GCGGCGATAGCGATAGCGACGACGATCATGGCTCCCACGGCCACGGCGAC
ATTGGTTCCCTCCCACCTCGTGAGGACCCAAGATTCGTGCGACAGATGGA
TATGCTTCACATCGACCCCTCGGAGGCACAAGTTGCTGATGCAATGGAAG
CAGCAGAACCCCGAAACAGGGAAGCCACGCTCGCGGCCGAGAATGCGCAG
CGCCTCGAAGAGTTGGCCGTTGACCCGCCGCCGCCAACTGTCGAAGATGT
CGTGCGCGAAATGGAAGAGCTGACCGTCGGAGACCAGCAGGTGGTCCGGA
TCGGCAATCCTGGCGCAGTCGACCCCGAGGCCGAGGTCCATGCCGCCGGA
AGGTCGATAAATGCGGAGGAAACTGCTGAGGAACGGCAGGCGCGGGAGAT
GCGGGAAATGGCCTACATTGACCGCCGTCGTCAAGAGGAACAACGCGAGA
CGTTTCGCACACGGCTGGTCCGGGAGACAGCAGTGCATGCGGTGATCGAG
GCCGGACTCGCGCAAGGAGACAACGCGCCTTCGATCGAAATGAACAGACA
CTTGATGTATATTTTGTGCCCGATTCTTGATACGCTGCTTCTGCTGTCAT
CGGTAAAGGACAGCGAGGGTGGGGGGTCGCAAGCGACGGCAGGGACGTTT
GGCCCGTATAGGGAAGATCTCGACGAGTGCGACAGTGACGAGGATCATGG
CTCCCACGGCAGCATTGGTGCCCTCTCTCGCGACGACAGTGACAGCGACG
AGGATCAGGTCTCCAAAGGCAGCATGGATGCCTCCTCTGGCGGCGATAGC
GATAGCGACGACGATCATGGCTCCCACGGCCACGGCGACATTGGTTCCCT
CCCACCTCGTGAGGACCCAAGATTCGTGCGACAGATGGATATGCTTCACA
TCGACCCCTCGGAGGCACAAGTTGCTGATGCAATGGAAGCAGCAGAACCC
CGAAACAGGGAAGCCACGCTCGCGGCCGAGAATGCGCAGCGCCTCGAAGA
GTTGGCCGTTGACCCGCCGCCGCCAACTGTCGAAGATGTCGTGCGCGAAA
TGGAAGAGCTGACCGTCGGAGACCAGCAGGTGGTCCGGATCGGCAATCCT
GGCGCAGTCGACCCCGAGGCCGAGGTCCATGCCGCCGGAAGGTCGATAAA
TGCGGAGGAAACTGCTGAGGAACGGCAGGCGCGGGAGATGCGGGAAATGG
CCTACATTGACCGCCGTCGTCAAGAGGAACAACGCGAGACGTTTCGCACA
CGGCTGGTCCGGGAGACAGCAGTGCATGCGGTGATCGAGGCCGGACTCGC
GCAAGGAGACAACGCGCCTTCGATCGAA back to top
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