mRNA_L-elsbetiae_contig15276.3741.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15276.3741.1 vs. uniprot
Match: D7G411_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G411_ECTSI) HSP 1 Score: 276 bits (705), Expect = 2.050e-81 Identity = 150/200 (75.00%), Postives = 167/200 (83.50%), Query Frame = 1 Query: 10 RDIDSVAAAGGGAVARLLGMPMGFRNTIREVQDTIGTVLDTVEAVKNLLNWTHPPKTLMVYALVALVWIVLLVVPGRYIVLTLGLLEFSKAWL-GAKEPGADELMPDHASFAPPSXXXXXXXXLATKLKNLLMSLPVDSELAACYAWEAREYSKKAKASLKLREQRARLKLLGSGRQWEGALRVRDRVGDPWESRSIFLV 606 RD +VA GGGAVARLLGMPMGFRNTIR+VQDTIGTVLDTVEAVKNLLNWTHPPKTL+VYA+VAL W+VLLVVPGRYIVLTLGLLEFSKAW+ G +EP EL+ D AP LA KL+NLL+SLPVDSELAACYAWEARE+S+K KA LKLREQRARLKLLG+GRQWEG +RVRDR GDPWE R + ++ Sbjct: 1733 RDAAAVAG-GGGAVARLLGMPMGFRNTIRDVQDTIGTVLDTVEAVKNLLNWTHPPKTLLVYAIVALAWLVLLVVPGRYIVLTLGLLEFSKAWMTGGQEP---ELVADGGGGAP--------SHLAIKLRNLLLSLPVDSELAACYAWEAREHSRKEKAGLKLREQRARLKLLGAGRQWEGEMRVRDRAGDPWEPRYLVVL 1920
BLAST of mRNA_L-elsbetiae_contig15276.3741.1 vs. uniprot
Match: A0A6H5L011_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L011_9PHAE) HSP 1 Score: 268 bits (685), Expect = 9.970e-79 Identity = 142/188 (75.53%), Postives = 158/188 (84.04%), Query Frame = 1 Query: 46 AVARLLGMPMGFRNTIREVQDTIGTVLDTVEAVKNLLNWTHPPKTLMVYALVALVWIVLLVVPGRYIVLTLGLLEFSKAWL-GAKEPGADELMPDHASFAPPSXXXXXXXXLATKLKNLLMSLPVDSELAACYAWEAREYSKKAKASLKLREQRARLKLLGSGRQWEGALRVRDRVGDPWESRSIFLV 606 AVARLLGMPMGFRNTIR+VQDTIGTVLDTVEAVKNLLNWTHPPKTL+VY +VAL W+VLLVVPGRYIVLTLGLLEFSKAW+ G +EP EL+ D P LA KL+NLL+SLPVDSELAACYAWEARE+S+K KA LKLREQRARLKLLG+GRQWEG +RVRDR GDPWESR + ++ Sbjct: 1881 AVARLLGMPMGFRNTIRDVQDTIGTVLDTVEAVKNLLNWTHPPKTLLVYTVVALAWLVLLVVPGRYIVLTLGLLEFSKAWMTGGQEP---ELVADDGGGTP--------SPLAIKLRNLLLSLPVDSELAACYAWEAREHSRKEKAGLKLREQRARLKLLGAGRQWEGGMRVRDRAGDPWESRYVVVL 2057
BLAST of mRNA_L-elsbetiae_contig15276.3741.1 vs. uniprot
Match: A0A7S2C9G1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C9G1_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 6.590e-16 Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 1 Query: 73 MGFRNTIREVQDTIGTVLDTVEAVKNLLNWTHPPKTLMVYALVALVWIVLLVVPGRYIVLTLGLLEFSKAWL 288 +G R T+ VQ+T+G VLD +E++KNLLNWTHP KT MVY +W+V++ VPGRYI L L EF K ++ Sbjct: 28 LGIRETVTFVQNTVGMVLDQMESLKNLLNWTHPRKTCMVYVAAVSIWVVVIYVPGRYIFLLATLWEFLKKFI 99
BLAST of mRNA_L-elsbetiae_contig15276.3741.1 vs. uniprot
Match: A0A448Z8C7_9STRA (Phorbol-ester/DAG-type domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8C7_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 2.390e-14 Identity = 48/171 (28.07%), Postives = 87/171 (50.88%), Query Frame = 1 Query: 76 GFRNTIREVQDTIGTVLDTVEAVKNLLNWTHPPKTLMVYALVALVWIVLLVVPGRYIVLTLGLLEFSKAW----------LGAKEPGADELMPDHASFAPPSXXXXXXXXLATKLKNLLMSLPVDSELAACYAWEAREYSKKAKASLKLREQRARLKLLGSGRQWEGALRV 558 G TI+ VQ+T+G+++D VE V NLLN+T P K+ ++ LVW+V ++P RY++L+ GL+++ ++ +G K P L +H + A K+ N + S+P + +L Y WE+R+ + ++ +RLK L + W +++ Sbjct: 1193 GIGGTIQVVQNTLGSIIDLVEGVMNLLNFTDPYKSSTIFVGSFLVWVVFCIIPTRYLILSAGLVQYGVSFVDRYGKALGIIGGKTPVESTLQIEHDKSSNEEDKNGKGSPFAIKVANAIRSIPTNEDLRKAYFWESRQLGTAKAKKYTVEKRESRLKKLWKAK-WHSTMKI 1362
BLAST of mRNA_L-elsbetiae_contig15276.3741.1 vs. uniprot
Match: A0A7S2KPX7_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KPX7_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 7.560e-14 Identity = 59/199 (29.65%), Postives = 100/199 (50.25%), Query Frame = 1 Query: 58 LLGMPMGFRNTIREV-------QDTIGTVLDTVEAVKNLLNWTHPPKTLMVYALVALVWIVLLVVPGRYIVLTLGLLEF------SKAWLGAKEPGADELMPDHASFAPPSXXXXXXXXLATKLKNLLMSLPVDSELAACYAWEAREYSKKAKASLKLREQRARLKLLGSGRQWEGALRVR---DRVGDPWESRSIFLV 606 ++G + NT+R + Q+T+G +LD VE+ +NL W P K+++V++ +++VWIVL ++P R+I+L+ GL EF + + + E G + S + T NL+ ++P D +L Y WEAR + L ++ +RLK L R W G L ++ + G WE R+IF + Sbjct: 752 MIGSSINTINTVRGMGGNAQWLQNTLGNLLDFVESFRNLFTWACPQKSMLVFSALSMVWIVLCIIPTRFIILSAGLYEFVGKHIMTAFSVDSSEDGNES--DXXXXXXENSIDNQPSIPILTHFYNLVAAVPNDEDLRRAYFWEARRMGGVERDDLAQSKRISRLKSLWRAR-WYGELYLKVSANAAGTGWEWRNIFTI 947
BLAST of mRNA_L-elsbetiae_contig15276.3741.1 vs. uniprot
Match: A0A7S3H4K2_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4K2_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 2.690e-12 Identity = 49/159 (30.82%), Postives = 83/159 (52.20%), Query Frame = 1 Query: 85 NTIREVQDTIGTVLDTVEAVKNLLNWTHPPKTLMVYALVALVWIVLLVVPGRYIVLTLGLLEFSKAWLGAKEPGADELMPDHASFAPPSXXXXXXXXLATKLKNLLMSLPVDSELAACYAWEAREYSKKAKASLKLREQRARLKLLGSGRQWEGALRVR 561 + ++ VQ+ + +LD +E++KNLLNWT P KT +Y + VW+V ++VPGR IVL +GL EF ++ E G + ++ + NL+ S+P D +LA Y E + Y+ +A K E+ +L+L+ W G + ++ Sbjct: 116 DNVKYVQNMMSGLLDQIESLKNLLNWTSPSKTFPLYVALVAVWLVTILVPGRLIVLAIGLYEFFFVFMPIPE-GRNTMI---------------------RFGNLVQSIPNDDDLAQIYGTEKKAYAASKQAEWKHTEKSRKLQLVLDS-PWHGLVSIK 251
BLAST of mRNA_L-elsbetiae_contig15276.3741.1 vs. uniprot
Match: A0A4D9CW43_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CW43_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 1.250e-11 Identity = 56/193 (29.02%), Postives = 94/193 (48.70%), Query Frame = 1 Query: 13 DIDSVAAAGGGAVARLLGMPMGFRNTIREVQDTIGTVLDTVEAVKNLLNWTHPPKTLMVYALVALVWIVLLVVPGRYIVLTLGLLEFSKAWLGAKEPGADELMPDHASFAPPSXXXXXXXXLATKLKNLLMSLPVDSELAACYAWEAREYSKKAKASLKLREQRARLKLLGS--GRQWEGALRVRDRVGD-PW 582 DI ++A + + R+T++ Q+ + L E+ KNLLNWTHP KTL +YA + +W++ L++P RY++L GL EF+ L P+ + P+ + +NLL S+P D +L Y E + + +K + +++ Q+AR L G WEG ++ R + PW Sbjct: 691 DITTLAPPSSSSTGGVFSSVWNLRSTVKHFQNLLDGYLSYAESWKNLLNWTHPQKTLAIYAALWALWLICLLLPTRYLILVAGLYEFTF-----------RLFPEQEEY--PN---------VIRAENLLASIPNDDDLRRVYYQENQNFLRKKRE--RVQNQKARRAHLSGVWGFLWEGNVQTRAAGSNQPW 859
BLAST of mRNA_L-elsbetiae_contig15276.3741.1 vs. uniprot
Match: W7TX45_9STRA (Protein c kinase isoform a n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TX45_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 3.310e-11 Identity = 56/193 (29.02%), Postives = 93/193 (48.19%), Query Frame = 1 Query: 13 DIDSVAAAGGGAVARLLGMPMGFRNTIREVQDTIGTVLDTVEAVKNLLNWTHPPKTLMVYALVALVWIVLLVVPGRYIVLTLGLLEFSKAWLGAKEPGADELMPDHASFAPPSXXXXXXXXLATKLKNLLMSLPVDSELAACYAWEAREYSKKAKASLKLREQRARLKLLGS--GRQWEGALRVRDRVGD-PW 582 DI + A + + R+T++ Q+ + L E+ KNLLNWTHP KTL +YA + +W++ L++P RY++L GL EF+ L P+ + P+ + +NLL S+P D +L Y E + + +K + +++ Q+AR L G WEG ++ R + PW Sbjct: 1240 DITTPAPPSSSSTGGVFSSVWNLRSTVKHFQNLLDGYLSYAESWKNLLNWTHPQKTLAIYAALWALWLICLLLPTRYLILVAGLYEFTF-----------RLFPEQEEY--PN---------VIRAENLLASIPNDDDLRRVYYQENQNFLRKKRE--RVQNQKARRAHLSGVWGFLWEGNVQTRAAGSNQPW 1408
BLAST of mRNA_L-elsbetiae_contig15276.3741.1 vs. uniprot
Match: A0A7S4AIS0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AIS0_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 1.100e-10 Identity = 53/191 (27.75%), Postives = 94/191 (49.21%), Query Frame = 1 Query: 76 GFRNTIREVQDTIGTVLDTVEAVKNLLNWTHPPKTLMVYALVALVWIVLLVVPGRYIVLTLGLLEFS--------KAWLG--AKEPGADELMP-DHASFAPPSXXXXXXXXLATKLKNLLMSLPVDSELAACYAWEAREYSKKAKASLKLREQRARLKLLGSGRQWEGALRV------RDRVGDP---WES 588 G TI+ VQ+T+ +++D +EAV N+LN+T P K+ MV+ LVW++ ++P RY++L GL ++ K LG +K+ A+ + D K+ N + S+P + +L Y WE+R+ + + ++ +RLK L + W ++++ RD+ P WES Sbjct: 1176 GIGGTIQVVQNTLASIIDRIEAVINILNFTDPYKSSMVFVGSFLVWVLFCIIPTRYLILFAGLAQYGITFVDKYVKKLLGIKSKKKSAESAIEIDQNGGLELDDKERKASPFGIKITNAVRSIPTNEDLRKTYFWESRQLGTEKAKKYAVEKRESRLKKLWKAK-WHSSMKILVQDSERDQSQQPMFHWES 1365
BLAST of mRNA_L-elsbetiae_contig15276.3741.1 vs. uniprot
Match: A0A7R9U764_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U764_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 1.190e-9 Identity = 51/174 (29.31%), Postives = 84/174 (48.28%), Query Frame = 1 Query: 76 GFRNTIREVQDTIGTVLDTVEAVKNLLNWTHPPKTLMVYALVALVWIVLLVVPGRYIVLTLGLLEFSKAWLGAKEPGADELMPDHASFAPPSXXXXXXXXLATKLKNLLMSLPVDSELAACYAWEAREYSKKAKASLKLREQRARLKLLGSGRQWEGALRVRDRVGDPWESRSI 597 G R+T+ VQ +G++LD +E +L W+HP K+ L + ++VL+++P RY+V+ + ++F+ L K+P E + A+ + N+ SLP +L YA E R Y SL + +RA L + QWEG R+R P +RS+ Sbjct: 74 GIRDTVLTVQHVLGSILDQIERFISLCRWSHPQKSAHAMYLYVVAYLVLVLIPTRYVVVAVIWVQFAAPILKDKDPAKSERGDEEVK-------------TASMIANMWESLPTHEDLRRYYASEHRAYRDFQDKSLVQQSRRALLHGVWKP-QWEGTCRLR-----PASARSV 228 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15276.3741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15276.3741.1 >prot_L-elsbetiae_contig15276.3741.1 ID=prot_L-elsbetiae_contig15276.3741.1|Name=mRNA_L-elsbetiae_contig15276.3741.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=203bp MPMGFRNTIREVQDTIGTVLDTVEAVKNLLNWTHPPKTLMVYALVALVWIback to top mRNA from alignment at L-elsbetiae_contig15276:129..2597- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15276.3741.1 ID=mRNA_L-elsbetiae_contig15276.3741.1|Name=mRNA_L-elsbetiae_contig15276.3741.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2469bp|location=Sequence derived from alignment at L-elsbetiae_contig15276:129..2597- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15276:129..2597- >mRNA_L-elsbetiae_contig15276.3741.1 ID=mRNA_L-elsbetiae_contig15276.3741.1|Name=mRNA_L-elsbetiae_contig15276.3741.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1218bp|location=Sequence derived from alignment at L-elsbetiae_contig15276:129..2597- (Laminarionema elsbetiae ELsaHSoW15)back to top |