mRNA_L-elsbetiae_contig15245.3729.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15245.3729.1 vs. uniprot
Match: A0A6H5JC04_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC04_9PHAE) HSP 1 Score: 224 bits (570), Expect = 2.200e-67 Identity = 119/212 (56.13%), Postives = 145/212 (68.40%), Query Frame = 2 Query: 278 TPFPS-MEAGAASAGAAVNSSLSLNVKPVQPGQVFPSRAELRLAVETEAAAEGRAIQNAGSGGGRNFSVICKTCRTWFVKGCRQSTKEFKVTKVGKEHLNCVGSGSMPSKVAKPLVDQLVRANSKIDGPVIKRTLKTAGLDMGIRDIQRAKKTLVDVSKEEEADAISRLPAFFEAIERDCPGSVATIERTTENRFVRSFAMTGKAAFVAANS 910 TP S ME GA+ + A + LS V PV GQVF SR + ++AV E AA GR+++N G R ++CKTC +W VKGC Q +FK+TKV H++C G G S V +PLVDQLVRAN KI GP IKRTLKT G + R QRAKK + SKE+EA AISRLP+ FE IERDCPGSVAT+E + +NRFVRSF M GKAA+VAA+S Sbjct: 35 TPLTSTMEGGASGSAGAATAGLSTTVAPVTAGQVFSSRHDAKVAVAAELAATGRSMKNGKGAGSRQIHLVCKTCTSWVVKGCLQKGGDFKITKVEGSHVDCAGGGRTSSAVVQPLVDQLVRANPKIAGPAIKRTLKTVGFTVSDRQSQRAKKRIATASKEDEAGAISRLPSLFEGIERDCPGSVATVEVSPDNRFVRSFLMLGKAAYVAAHS 246
BLAST of mRNA_L-elsbetiae_contig15245.3729.1 vs. uniprot
Match: A0A6H5KRM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRM0_9PHAE) HSP 1 Score: 181 bits (459), Expect = 4.610e-53 Identity = 102/209 (48.80%), Postives = 126/209 (60.29%), Query Frame = 2 Query: 293 MEAGAASAGAAVNSSLSLNVKPVQPGQVFPSRAELRLAVETEAAAEGRAIQNAGSGGGRNFSVICKTCRTWFVKGCRQSTKEFKVTKVGKEHLNCVGSGSMPSKVAKPLVDQLVRANSKIDGPVIKRTLKTAGLDMGIRDIQRAKKTLVDVSKEEEADAISRLPAFFEAIERDCPGSVATIERTTENRFVRSFAMTGKAAFVAANSTPK 919 ME G + + A + LS V PV GQVF SR ++AV E +A R++++ G R ++CKTC W VKGC Q +FK+TK LVRAN KI GP IKRTLKTAG + R QR KK + + SKE+EA AISRLP+ FE IERDCPGSVAT+E + +NRFVRSF M GKAA+VAA+S PK Sbjct: 1 MEGGVSGSAGAATAGLSTTVAPVTAGQVFSSRHAAKVAVAAELSATCRSMKDGKGAGSRQIHLVCKTCIRWVVKGCLQKGGDFKITK-------------------------LVRANPKIAGPAIKRTLKTAGFTVSDRQSQRTKKRIANASKEDEAGAISRLPSLFERIERDCPGSVATVEMSPDNRFVRSFLMLGKAAYVAAHSVPK 184
BLAST of mRNA_L-elsbetiae_contig15245.3729.1 vs. uniprot
Match: A0A6H5K6I3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6I3_9PHAE) HSP 1 Score: 178 bits (452), Expect = 7.780e-52 Identity = 99/197 (50.25%), Postives = 123/197 (62.44%), Query Frame = 2 Query: 293 MEAGAASAGAAVNSSLSLNVKPVQPGQVFPSRAELRLAVETEAAAEGRAIQNAGSGGGRNFSVICKTCRTWFVKGCRQSTKEFKVTKVGKEHLN--CVGSGSMPSKVAKPLVDQLVRANSKIDGPVIKRTLKTAGLDMGIRDIQRAKKTLVDVSKEEEADAISRLPAFFEAIERDCPGSVATIERTTENRFVRSFAM 877 ME A+ + A + LS V PV Q+F SR ++AV E AA GR+++N R ++CKTC +W V+GC+Q +FK+TK G+ C G KPLVDQLVRAN KI GP IKRTLKT G + R QRAKK + SKE+EA AISRLP+ FE ERDCPGSVAT+E + +NRFVRSF M Sbjct: 1 MEGRASGSAGAAAAGLSNTVVPVTAWQIFSSRHAAKVAVAAELAATGRSMKNGKGARSRQIHLVCKTCTSWVVRGCQQKGDDFKITKQGRGLARRLCWGRADELRSSTKPLVDQLVRANPKIVGPAIKRTLKTVGFTVSDRQSQRAKKRIATASKEDEAAAISRLPSLFEGTERDCPGSVATVEVSPDNRFVRSFLM 197
BLAST of mRNA_L-elsbetiae_contig15245.3729.1 vs. uniprot
Match: D7G6Q0_ECTSI (MULE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Q0_ECTSI) HSP 1 Score: 180 bits (457), Expect = 1.900e-48 Identity = 88/161 (54.66%), Postives = 112/161 (69.57%), Query Frame = 2 Query: 440 IQNAGSGGGRNFSVICKTCRTWFVKGCRQSTKEFKVTKVGKEHLNCVGSGSMPSKVAKPLVDQLVRANSKIDGPVIKRTLKTAGLDMGIRDIQRAKKTLVDVSKEEEADAISRLPAFFEAIERDCPGSVATIERTTENRFVRSFAMTGKAAFVAANSTPKV 922 ++N G R ++CKTC TW VKGC Q +FK+TKV H++C G G S V +PLV+QLVRAN KI G IKRTLKT G + R QRAKK + +K + A A+SRLP+ F+ IERDCPGS+AT+E + +NRFVRSF M GKAA+VAA+S PK+ Sbjct: 1 MKNGKGAGSRQIHLVCKTCTTWVVKGCLQKGGDFKITKVEGSHVDCAGGGRTSSAVVQPLVNQLVRANPKIAGTAIKRTLKTVGFTVSDRQSQRAKKRIATATKGDGAAALSRLPSLFQGIERDCPGSIATVEMSPDNRFVRSFLMLGKAAYVAAHSVPKI 161
BLAST of mRNA_L-elsbetiae_contig15245.3729.1 vs. uniprot
Match: A0A6H5JUL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUL3_9PHAE) HSP 1 Score: 164 bits (416), Expect = 1.940e-46 Identity = 96/212 (45.28%), Postives = 125/212 (58.96%), Query Frame = 2 Query: 293 MEAGAASAGAAVNSSLSLNVKPVQPGQVFPSRAELRLAVETEAAAEGRAIQNAGSGGGRNFSVICKTCRTWFVKGCRQSTKEFKVTKVGKEHLNCVGSGSMPSKVAKPLVDQLVRANSKIDGPVIKRTLKTAGLDM-GIRDIQRAKKTLVDVSKEEEADAISRLPAFFEAIERDCPGSVATIER--TTENRFVRSFAMTGKAAFVAANSTPK 919 ME GA + A + LS V PV GQ+F SR ++AV E A GR+++N G R ++CKTC +W VK +Q +F +TKV H++C G S V +PLVDQ TLKT G + R QRAKK + + +K +EA AISRLP FE IERDCPGS+AT+E + +NRFVRSF M GKAA++AA+S PK Sbjct: 1 MEGGARGSTGAAAAGLSTTVVPVTAGQIFSSRHAAQVAVAAELTATGRSMKNGKGVGSRQIHLVCKTCTSWAVKAFQQKGGDFNITKVEGSHVDCAGGERTSSAVVQPLVDQ---------------TLKTVGFTVVSDRQSQRAKKRIANATKGDEATAISRLPFLFEGIERDCPGSIATVEERMSPDNRFVRSFLMLGKAAYLAAHSVPK 197
BLAST of mRNA_L-elsbetiae_contig15245.3729.1 vs. uniprot
Match: A0A6H5K8Y2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y2_9PHAE) HSP 1 Score: 152 bits (385), Expect = 1.090e-42 Identity = 75/133 (56.39%), Postives = 90/133 (67.67%), Query Frame = 2 Query: 440 IQNAGSGGGRNFSVICKTCRTWFVKGCRQSTKEFKVTKVGKEHLNCVGSGSMPSKVAKPLVDQLVRANSKIDGPVIKRTLKTAGLDMGIRDIQRAKKTLVDVSKEEEADAISRLPAFFEAIERDCPGSVATIE 838 ++N G R ++CKTC +WFVKGC Q +FK+ V H++C G G S V +PLVDQLVRAN KI GP IKRTLKT G + R QRAKK + SKE+EA AISRLP+ E IERDCPGSVAT+E Sbjct: 1 MKNGKGAGSRQIHLVCKTCTSWFVKGCLQKGGDFKIAPVEGSHVDCAGGGRTSSAVVQPLVDQLVRANPKIAGPAIKRTLKTVGFTVSDRQSQRAKKRIATASKEDEAGAISRLPSLVEGIERDCPGSVATVE 133
BLAST of mRNA_L-elsbetiae_contig15245.3729.1 vs. uniprot
Match: A0A6H5K218_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K218_9PHAE) HSP 1 Score: 145 bits (367), Expect = 1.380e-39 Identity = 79/167 (47.31%), Postives = 100/167 (59.88%), Query Frame = 2 Query: 293 MEAGAASAGAAVNSSLSLNVKPVQPGQVFPSRAELRLAVETEAAAEGRAIQNAGSGGGRNFSVICKTCRTWFVKGCRQSTKEFKVTKVGKEHLNCVGSGSMPSKVAKPLVDQLVRANSKIDGPVIKRTLKTAGLDMGIRDIQRAKKTLVDVSKEEEADAISRLPAFF 793 ME GA+ A + LS V PV GQ+F SR ++AV E AA GR+++N G R ++CKTC +W VKGC Q +FK+TKV H++C G S V + L DQLVRAN KI GP IKRTL+T + QRAKK + SKE+EA AISRL + F Sbjct: 1 MEGGASGGAGATTAGLSTTVAPVTAGQIFSSRHAAKVAVAAELAATGRSMKNGKGAGSRQIHLVCKTCTSWVVKGCLQKGGDFKITKVKGSHVDCAVGGRTSSAVVQHLADQLVRANPKIAGPAIKRTLETVVFTVSDGQSQRAKKRIATASKEDEAGAISRLQSLF 167
BLAST of mRNA_L-elsbetiae_contig15245.3729.1 vs. uniprot
Match: A0A6H5J5B7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5B7_9PHAE) HSP 1 Score: 149 bits (375), Expect = 1.460e-38 Identity = 96/216 (44.44%), Postives = 117/216 (54.17%), Query Frame = 2 Query: 371 QVFPSRAELRLAVETEAAAEGRAIQNAGSGGGRNFSVICKTCRTW------------FVKG---------------------CRQSTKEFKVTKVGKEHLNCVGSGSMPSKVAKPLVDQLVRANSKIDGPVIKRTLKTAGLDMGIRDIQRAKKTLVDVSKEEEADAISRLPAFFEAIERDCPGSVATIERTTENRFVRSFAMTGKAAFVAANSTPK 919 +VF SR ++AV E AA R+++N G R ++CKT +KG Q +FK+TKV H V +PLVDQLVR N KI GP IKRTLKTAG + R QRAKK + SKE+EA AISRLP+ FE IERD PGSVAT+E + +NRFVRSF M GKAA+VAA+S PK Sbjct: 153 KVFSSRHAAKVAVAAELAATCRSMKNGKGAGSRQIHLVCKTXXXXXXXXXXXXXXXXIMKGGASGSAGAATAGLSTIVAPVTAGQKGGDFKITKVEDSH------------VVQPLVDQLVRTNPKIAGPAIKRTLKTAGFTVSDRQSQRAKKRIATASKEDEAGAISRLPSLFEGIERDYPGSVATVEMSPDNRFVRSFLMLGKAAYVAAHSVPK 356
BLAST of mRNA_L-elsbetiae_contig15245.3729.1 vs. uniprot
Match: A0A6H5KXJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXJ9_9PHAE) HSP 1 Score: 134 bits (336), Expect = 3.870e-35 Identity = 71/144 (49.31%), Postives = 90/144 (62.50%), Query Frame = 2 Query: 293 MEAGAASAGAAVNSSLSLNVKPVQPGQVFPSRAELRLAVETEAAAEGRAIQNAGSGGGRNFSVICKTCRTWFVKGCRQSTKEFKVTKVGKEHLNCVGSGSMPSKVAKPLVDQLVRANSKIDGPVIKRTLKTAGLDMGIRDIQRA 724 ME + AGA + LS V PV Q FPSR L++AV E AA+GRA++N G R ++CKTC +W VKGC+Q +FK+TKV H++C G G S V +PLVDQLVRAN KI GP IKRTL+T G + R Q + Sbjct: 1 MEGASGGAGAPA-AGLSTTVVPVTEEQTFPSRKALKVAVAAELAAQGRAMKNGSGAGSRQIHLVCKTCTSWSVKGCQQRNGDFKITKVESSHVDCRGGGRTSSAVMQPLVDQLVRANPKIGGPAIKRTLETVGFAVSDRTSQES 143
BLAST of mRNA_L-elsbetiae_contig15245.3729.1 vs. uniprot
Match: A0A6H5K1Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1Q8_9PHAE) HSP 1 Score: 116 bits (291), Expect = 2.020e-27 Identity = 60/91 (65.93%), Postives = 69/91 (75.82%), Query Frame = 2 Query: 647 KIDGPVIKRTLKTAGLDMGIRDIQRAKKTLVDVSKEEEADAISRLPAFFEAIERDCPGSVATIERTTENRFVRSFAMTGKAAFVAANSTPK 919 KI GP IKRTLKT G + R QRAKK + SKE+EA AISRLP+ FE IERDCPGSVAT+E + +NRFVRS M GKAA+VAA+S PK Sbjct: 151 KIAGPAIKRTLKTVGFTVSDRQSQRAKKRIATASKEDEAGAISRLPSLFEGIERDCPGSVATVEMSPDNRFVRSCLMLGKAAYVAAHSVPK 241 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15245.3729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15245.3729.1 >prot_L-elsbetiae_contig15245.3729.1 ID=prot_L-elsbetiae_contig15245.3729.1|Name=mRNA_L-elsbetiae_contig15245.3729.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=245bp MGELLTQLAVGVSHMHAPRHTPHTLHCTPFPSMEAGAASAGAAVNSSLSLback to top mRNA from alignment at L-elsbetiae_contig15245:2..1769+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15245.3729.1 ID=mRNA_L-elsbetiae_contig15245.3729.1|Name=mRNA_L-elsbetiae_contig15245.3729.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1768bp|location=Sequence derived from alignment at L-elsbetiae_contig15245:2..1769+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15245:2..1769+ >mRNA_L-elsbetiae_contig15245.3729.1 ID=mRNA_L-elsbetiae_contig15245.3729.1|Name=mRNA_L-elsbetiae_contig15245.3729.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1470bp|location=Sequence derived from alignment at L-elsbetiae_contig15245:2..1769+ (Laminarionema elsbetiae ELsaHSoW15)back to top |