mRNA_L-elsbetiae_contig1523.3728.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1523.3728.1
Unique NamemRNA_L-elsbetiae_contig1523.3728.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1523.3728.1 vs. uniprot
Match: D8LQV8_ECTSI (Glucose-6-phosphate isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQV8_ECTSI)

HSP 1 Score: 266 bits (681), Expect = 1.130e-76
Identity = 128/167 (76.65%), Postives = 140/167 (83.83%), Query Frame = 1 
Query: 1711 RFDMESTSKRVAQDRSLLPFEAGEIGFGEPGTNGQHSFCQLIHQGRVIPADCVGYCQFQCPVLLEGEPVAN--KLMSNFFAQPDGLAYDRTAEELEA*GVPEWLRPRKVFTENRPSWSLLFPQLDAFSCGQLLAVYEHRTVVQGFVWGLNLFNQWRMELGKKLANEI 2205
            + DMES  KRVAQD S+LPF+AGEIGFGEPGTNGQHSF QLIHQG V PAD  GYC  QCPVLLEG+PV N  + MSNFFAQPD LAY +TAEELE  GVPEW RP KVFT NRPS SLLFP+LDAFSCGQLLA+YEHRT VQGFVWGLN F+QW +ELGKKLA ++
Sbjct:  356 QVDMESNGKRVAQDGSVLPFDAGEIGFGEPGTNGQHSFYQLIHQGGVFPADFGGYCTSQCPVLLEGDPVPNHEEFMSNFFAQPDVLAYAKTAEELEKEGVPEWFRPHKVFTGNRPSLSLLFPKLDAFSCGQLLAIYEHRTAVQGFVWGLNSFDQWGVELGKKLATKV 522
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BLAST of mRNA_L-elsbetiae_contig1523.3728.1 vs. uniprot
Match: K3WLR2_GLOUD (Glucose-6-phosphate isomerase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLR2_GLOUD)

HSP 1 Score: 231 bits (589), Expect = 1.800e-63
Identity = 111/167 (66.47%), Postives = 133/167 (79.64%), Query Frame = 1 
Query: 1711 RFDMESTSKRVAQDRSLLPFEAGEIGFGEPGTNGQHSFCQLIHQGRVIPADCVGYCQFQCPVLLEGEPVAN--KLMSNFFAQPDGLAYDRTAEELEA*GVPEWLRPRKVFTENRPSWSLLFPQLDAFSCGQLLAVYEHRTVVQGFVWGLNLFNQWRMELGKKLANEI 2205
            + DMES  KRV  +   LPFEAGE+ FGEPGTNGQHSF QLIHQGRV+P D +G+C+ Q PVLL GEPV+N  +LMSNFFAQPD LA  ++ ++LE  GVPE LR  K+F  NRPS SLLFP+LDAFSCGQLLA+YEHRTVVQG +WG+N F+QW +ELGK LA ++
Sbjct:  362 QVDMESNGKRVTVEGVDLPFEAGEVNFGEPGTNGQHSFYQLIHQGRVVPCDFIGFCESQNPVLLAGEPVSNHDELMSNFFAQPDALARGKSLKDLETEGVPEHLRNHKLFPGNRPSISLLFPKLDAFSCGQLLALYEHRTVVQGAIWGVNSFDQWGVELGKVLAKQV 528
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BLAST of mRNA_L-elsbetiae_contig1523.3728.1 vs. uniprot
Match: A0A6U2AQ63_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2AQ63_9STRA)

HSP 1 Score: 225 bits (574), Expect = 2.530e-63
Identity = 106/167 (63.47%), Postives = 130/167 (77.84%), Query Frame = 1 
Query: 1711 RFDMESTSKRVAQDRSLLPFEAGEIGFGEPGTNGQHSFCQLIHQGRVIPADCVGYCQFQCPVLLEGEPVAN--KLMSNFFAQPDGLAYDRTAEELEA*GVPEWLRPRKVFTENRPSWSLLFPQLDAFSCGQLLAVYEHRTVVQGFVWGLNLFNQWRMELGKKLANEI 2205
            + DMES  KRV  D   LP+ +GEI FGEPGTNGQHSF QL+HQGRV+PAD +G+C+ Q P+ LEGE V+N  +LMSNFFAQPD LAY +T  +L A GVPE LRP KVF  NRPS S+L  +LDA++ GQLLA+YEHRT VQGF+WG+N F+QW +ELGK LA ++
Sbjct:  177 QVDMESNGKRVGTDGFALPYPSGEINFGEPGTNGQHSFYQLLHQGRVVPADFIGFCESQTPIQLEGESVSNHDELMSNFFAQPDALAYGKTLNDLAAEGVPEELRPHKVFPGNRPSSSILLTRLDAYAAGQLLALYEHRTAVQGFLWGINSFDQWGVELGKVLAKQV 343
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BLAST of mRNA_L-elsbetiae_contig1523.3728.1 vs. uniprot
Match: A0A7S0C7V0_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C7V0_9STRA)

HSP 1 Score: 227 bits (579), Expect = 2.930e-63
Identity = 109/167 (65.27%), Postives = 131/167 (78.44%), Query Frame = 1 
Query: 1711 RFDMESTSKRVAQDRSLLPFEAGEIGFGEPGTNGQHSFCQLIHQGRVIPADCVGYCQFQCPVLLEGEPVAN--KLMSNFFAQPDGLAYDRTAEELEA*GVPEWLRPRKVFTENRPSWSLLFPQLDAFSCGQLLAVYEHRTVVQGFVWGLNLFNQWRMELGKKLANEI 2205
            + DMES  KRVA D + +PF+ GEI FGEPGTNGQHSF QL+HQGRV+PAD VG+C+ Q PV LEGEPV N  +LMSNFFAQPD LAY +T  +  A G+PE LR  KVF+ NRPS S+L  +LDAF+ GQLLA+YEHRT VQGFVWG+N F+QW +ELGK LA ++
Sbjct:  246 QVDMESNGKRVAIDGTPVPFQTGEINFGEPGTNGQHSFYQLMHQGRVVPADFVGFCESQSPVELEGEPVTNHDELMSNFFAQPDALAYGKTLADCVAEGIPEELREHKVFSGNRPSSSMLLTRLDAFAIGQLLAIYEHRTAVQGFVWGINSFDQWGVELGKVLAKQV 412
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BLAST of mRNA_L-elsbetiae_contig1523.3728.1 vs. uniprot
Match: A0A836C9A9_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9A9_9STRA)

HSP 1 Score: 230 bits (587), Expect = 4.770e-63
Identity = 112/166 (67.47%), Postives = 132/166 (79.52%), Query Frame = 1 
Query: 1711 RFDMESTSKRVAQDRSLLPFEAGEIGFGEPGTNGQHSFCQLIHQGRVIPADCVGYCQFQCPVLLEGEPVAN--KLMSNFFAQPDGLAYDRTAEELEA*GVPEWLRPRKVFTENRPSWSLLFPQLDAFSCGQLLAVYEHRTVVQGFVWGLNLFNQWRMELGKKLANE 2202
            + DMES  KRVA D + LPFEAGE+ FGEPGTNGQHSF QLIHQGR++P D +GYC+   PV L GEPV N  +LMSNFFAQ D LAY +TAE+    GVPE LRP KVF  NRPS SLLFP+L+AFS GQLLA+YEHRT VQGF+WG+N F+QW +ELGK+LA++
Sbjct:  358 QVDMESNGKRVAIDGTELPFEAGEVDFGEPGTNGQHSFYQLIHQGRIVPCDFLGYCESPAPVSLAGEPVTNHDELMSNFFAQADALAYGKTAEQCAEEGVPEPLRPHKVFPGNRPSSSLLFPKLNAFSLGQLLALYEHRTGVQGFIWGVNSFDQWGVELGKQLASK 523
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BLAST of mRNA_L-elsbetiae_contig1523.3728.1 vs. uniprot
Match: A0A7S3GQM9_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GQM9_9STRA)

HSP 1 Score: 228 bits (580), Expect = 2.960e-62
Identity = 111/167 (66.47%), Postives = 129/167 (77.25%), Query Frame = 1 
Query: 1711 RFDMESTSKRVAQDRSLLPFEAGEIGFGEPGTNGQHSFCQLIHQGRVIPADCVGYCQFQCPVLLEGEPVAN--KLMSNFFAQPDGLAYDRTAEELEA*GVPEWLRPRKVFTENRPSWSLLFPQLDAFSCGQLLAVYEHRTVVQGFVWGLNLFNQWRMELGKKLANEI 2205
            + DMES  KRV+ +   LP+  GEI FGEPGTNGQHSF QLIHQGRV+PA+ +GYC+   PV LEGE V+N  +LMSNFFAQPD LAY +T  EL A GVP  L P K F  NRPS SLLFP+L+AFSCGQLLA+YEHR  VQGFVWGLN F+QW +ELGK LAN++
Sbjct:  357 QVDMESNGKRVSVEGQPLPYACGEIIFGEPGTNGQHSFYQLIHQGRVVPAEFIGYCKSPHPVFLEGEVVSNHDELMSNFFAQPDALAYGKTVSELMAEGVPAHLHPHKEFPGNRPSLSLLFPELNAFSCGQLLAMYEHRVAVQGFVWGLNSFDQWGVELGKVLANKV 523
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BLAST of mRNA_L-elsbetiae_contig1523.3728.1 vs. uniprot
Match: A0A8K1FFQ4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFQ4_PYTOL)

HSP 1 Score: 227 bits (578), Expect = 6.330e-62
Identity = 109/167 (65.27%), Postives = 132/167 (79.04%), Query Frame = 1 
Query: 1711 RFDMESTSKRVAQDRSLLPFEAGEIGFGEPGTNGQHSFCQLIHQGRVIPADCVGYCQFQCPVLLEGEPVAN--KLMSNFFAQPDGLAYDRTAEELEA*GVPEWLRPRKVFTENRPSWSLLFPQLDAFSCGQLLAVYEHRTVVQGFVWGLNLFNQWRMELGKKLANEI 2205
            + DMES  KRV  +   LPF AGE+ FGEPGTNGQHSF QLIHQGRV+P D +G+C+ Q PV L+GEPV+N  +LMSNFFAQPD LA  ++ ++LEA  VPE LR  K+F  NRPS SLLFP+LDAF+CGQLLA+YEHRTVVQG +WGLN F+QW +ELGK LA ++
Sbjct:  361 QVDMESNGKRVTLEGVELPFAAGEVNFGEPGTNGQHSFYQLIHQGRVVPCDFLGFCESQNPVSLDGEPVSNHDELMSNFFAQPDALARGKSLKDLEAENVPEHLRAHKLFPGNRPSISLLFPKLDAFTCGQLLALYEHRTVVQGAIWGLNSFDQWGVELGKVLAKQV 527
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BLAST of mRNA_L-elsbetiae_contig1523.3728.1 vs. uniprot
Match: A0A662WKH9_9STRA (Glucose-6-phosphate isomerase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKH9_9STRA)

HSP 1 Score: 226 bits (577), Expect = 8.210e-62
Identity = 110/167 (65.87%), Postives = 132/167 (79.04%), Query Frame = 1 
Query: 1711 RFDMESTSKRVAQDRSLLPFEAGEIGFGEPGTNGQHSFCQLIHQGRVIPADCVGYCQFQCPVLLEGEPVAN--KLMSNFFAQPDGLAYDRTAEELEA*GVPEWLRPRKVFTENRPSWSLLFPQLDAFSCGQLLAVYEHRTVVQGFVWGLNLFNQWRMELGKKLANEI 2205
            + DMES  KRV+ +   LPF+AGE+ FGEPGTNGQHSF QLIHQG+V+P D +G+CQ Q PV L GEPV+N  +LMSNFFAQPD LA  ++ E+LEA GVP  LR  K+F  NRPS SLLF +LDAFSCGQLLA+YEHRTVVQG +WGLN F+QW +ELGK LA ++
Sbjct:  358 QVDMESNGKRVSMEGVDLPFQAGEVNFGEPGTNGQHSFYQLIHQGQVVPCDFLGFCQSQNPVYLAGEPVSNHDELMSNFFAQPDALARGKSLEDLEAEGVPAALRNHKMFPGNRPSISLLFQKLDAFSCGQLLALYEHRTVVQGSIWGLNSFDQWGVELGKVLAKQV 524
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BLAST of mRNA_L-elsbetiae_contig1523.3728.1 vs. uniprot
Match: A0A7R9UEX6_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEX6_9STRA)

HSP 1 Score: 224 bits (571), Expect = 2.490e-61
Identity = 107/167 (64.07%), Postives = 129/167 (77.25%), Query Frame = 1 
Query: 1711 RFDMESTSKRVAQDRSLLPFEAGEIGFGEPGTNGQHSFCQLIHQGRVIPADCVGYCQFQCPVLLEGEPVAN--KLMSNFFAQPDGLAYDRTAEELEA*GVPEWLRPRKVFTENRPSWSLLFPQLDAFSCGQLLAVYEHRTVVQGFVWGLNLFNQWRMELGKKLANEI 2205
            + DMES  KRV  D ++LP+  G I FGEPGTNGQHSF QLIHQGRVIPA+ +G+C+ Q PV LEGE VAN  +LMSNFFAQPD LA  +   ELEA GVP  LRP K F  NRPS SLLF +LDA++CGQLLA+YEHRT V+GF+WG+N F+QW ++LGK LA ++
Sbjct:  321 QVDMESNGKRVGMDGAVLPYSTGVINFGEPGTNGQHSFYQLIHQGRVIPAEFIGFCESQFPVNLEGEQVANHDELMSNFFAQPDALAMGKNLAELEAEGVPAELRPHKEFPGNRPSLSLLFQKLDAYTCGQLLALYEHRTAVEGFIWGINSFDQWGVQLGKVLAKQV 487
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BLAST of mRNA_L-elsbetiae_contig1523.3728.1 vs. uniprot
Match: A0A6V2PJ91_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2PJ91_9STRA)

HSP 1 Score: 227 bits (578), Expect = 3.880e-61
Identity = 110/167 (65.87%), Postives = 131/167 (78.44%), Query Frame = 1 
Query: 1711 RFDMESTSKRVAQDRSLLPFEAGEIGFGEPGTNGQHSFCQLIHQGRVIPADCVGYCQFQCPVLLEGEPVAN--KLMSNFFAQPDGLAYDRTAEELEA*GVPEWLRPRKVFTENRPSWSLLFPQLDAFSCGQLLAVYEHRTVVQGFVWGLNLFNQWRMELGKKLANEI 2205
            + DMES  KRVA D + LPF AGEI FGEPGTNGQHSF QL+HQGRV+PAD +G+C+ Q PV L+GE V+N  +LMSNFFAQPD LAY +T  +L   GVPE LR  KVFT NRPS SLL  +LDAF+ GQ+LA+YEHRT VQGFVWG+N F+QW +ELGK LA ++
Sbjct:  452 QLDMESNGKRVAMDGTPLPFYAGEINFGEPGTNGQHSFYQLLHQGRVVPADFIGFCESQRPVELDGEQVSNHDELMSNFFAQPDALAYGKTFNDLIQEGVPEELRQHKVFTGNRPSSSLLLTRLDAFAVGQILAIYEHRTAVQGFVWGINSFDQWGVELGKVLAKQV 618
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1523.3728.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQV8_ECTSI1.130e-7676.65Glucose-6-phosphate isomerase n=2 Tax=Ectocarpus T... [more]
K3WLR2_GLOUD1.800e-6366.47Glucose-6-phosphate isomerase n=1 Tax=Globisporang... [more]
A0A6U2AQ63_9STRA2.530e-6363.47Glucose-6-phosphate isomerase n=1 Tax=Pseudictyota... [more]
A0A7S0C7V0_9STRA2.930e-6365.27Glucose-6-phosphate isomerase n=1 Tax=Proboscia in... [more]
A0A836C9A9_9STRA4.770e-6367.47Glucose-6-phosphate isomerase n=1 Tax=Tribonema mi... [more]
A0A7S3GQM9_9STRA2.960e-6266.47Glucose-6-phosphate isomerase n=1 Tax=Spumella elo... [more]
A0A8K1FFQ4_PYTOL6.330e-6265.27Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662WKH9_9STRA8.210e-6265.87Glucose-6-phosphate isomerase n=2 Tax=Nothophytoph... [more]
A0A7R9UEX6_9STRA2.490e-6164.07Glucose-6-phosphate isomerase n=1 Tax=Pinguiococcu... [more]
A0A6V2PJ91_9STRA3.880e-6165.87Glucose-6-phosphate isomerase n=1 Tax=Ditylum brig... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1523contigL-elsbetiae_contig1523:18011..25281 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score148.7
Seed ortholog evalue2.1e-33
Seed eggNOG ortholog2880.D8LQV8
Preferred namePGI
KEGG rclassRC00376,RC00563
KEGG koko:K01810
KEGG ReactionR02739,R02740,R03321
KEGG Pathwayko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00001,M00004,M00114
Hectar predicted targeting categorymitochondrion
GOsGO:0002376,GO:0003674,GO:0003824,GO:0004347,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0006955,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009605,GO:0009607,GO:0009620,GO:0009814,GO:0009817,GO:0009987,GO:0010035,GO:0010038,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042221,GO:0042866,GO:0043207,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045087,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046686,GO:0046700,GO:0046939,GO:0050832,GO:0050896,GO:0051186,GO:0051188,GO:0051704,GO:0051707,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0098542,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576
EggNOG free text desc.glucose-6-phosphate isomerase activity
EggNOG OGsCOG0166@1,KOG2446@2759
EC5.3.1.9
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Exons8
Model size2209
Cds size420
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1523.3728.1prot_L-elsbetiae_contig1523.3728.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1523 21653..24503 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815620.2639642-UTR-L-elsbetiae_contig1523:18010..183961622815620.2639642-UTR-L-elsbetiae_contig1523:18010..18396Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1523 18011..18396 +
1691682995.7170045-UTR-L-elsbetiae_contig1523:18010..183961691682995.7170045-UTR-L-elsbetiae_contig1523:18010..18396Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1523 18011..18396 +
1622815620.2766688-UTR-L-elsbetiae_contig1523:19021..199161622815620.2766688-UTR-L-elsbetiae_contig1523:19021..19916Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1523 19022..19916 +
1691682995.7306352-UTR-L-elsbetiae_contig1523:19021..199161691682995.7306352-UTR-L-elsbetiae_contig1523:19021..19916Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1523 19022..19916 +
1622815620.2874212-UTR-L-elsbetiae_contig1523:20551..206691622815620.2874212-UTR-L-elsbetiae_contig1523:20551..20669Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1523 20552..20669 +
1691682995.7391498-UTR-L-elsbetiae_contig1523:20551..206691691682995.7391498-UTR-L-elsbetiae_contig1523:20551..20669Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1523 20552..20669 +
1622815620.2982476-UTR-L-elsbetiae_contig1523:21473..216521622815620.2982476-UTR-L-elsbetiae_contig1523:21473..21652Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1523 21474..21652 +
1691682995.7497032-UTR-L-elsbetiae_contig1523:21473..216521691682995.7497032-UTR-L-elsbetiae_contig1523:21473..21652Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1523 21474..21652 +
1622815620.3575592-UTR-L-elsbetiae_contig1523:24503..245331622815620.3575592-UTR-L-elsbetiae_contig1523:24503..24533Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1523 24504..24533 +
1691682995.8018997-UTR-L-elsbetiae_contig1523:24503..245331691682995.8018997-UTR-L-elsbetiae_contig1523:24503..24533Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1523 24504..24533 +
1622815620.3708036-UTR-L-elsbetiae_contig1523:25100..252811622815620.3708036-UTR-L-elsbetiae_contig1523:25100..25281Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1523 25101..25281 +
1691682995.810223-UTR-L-elsbetiae_contig1523:25100..252811691682995.810223-UTR-L-elsbetiae_contig1523:25100..25281Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1523 25101..25281 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815620.3125622-CDS-L-elsbetiae_contig1523:21652..216571622815620.3125622-CDS-L-elsbetiae_contig1523:21652..21657Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1523 21653..21657 +
1691682995.7577047-CDS-L-elsbetiae_contig1523:21652..216571691682995.7577047-CDS-L-elsbetiae_contig1523:21652..21657Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1523 21653..21657 +
1622815620.3250046-CDS-L-elsbetiae_contig1523:22064..221931622815620.3250046-CDS-L-elsbetiae_contig1523:22064..22193Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1523 22065..22193 +
1691682995.766721-CDS-L-elsbetiae_contig1523:22064..221931691682995.766721-CDS-L-elsbetiae_contig1523:22064..22193Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1523 22065..22193 +
1622815620.336404-CDS-L-elsbetiae_contig1523:23890..240201622815620.336404-CDS-L-elsbetiae_contig1523:23890..24020Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1523 23891..24020 +
1691682995.7781758-CDS-L-elsbetiae_contig1523:23890..240201691682995.7781758-CDS-L-elsbetiae_contig1523:23890..24020Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1523 23891..24020 +
1622815620.3469982-CDS-L-elsbetiae_contig1523:24347..245031622815620.3469982-CDS-L-elsbetiae_contig1523:24347..24503Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1523 24348..24503 +
1691682995.7899935-CDS-L-elsbetiae_contig1523:24347..245031691682995.7899935-CDS-L-elsbetiae_contig1523:24347..24503Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1523 24348..24503 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1523.3728.1

>prot_L-elsbetiae_contig1523.3728.1 ID=prot_L-elsbetiae_contig1523.3728.1|Name=mRNA_L-elsbetiae_contig1523.3728.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=140bp
MRLTWRATASTWRRAGPCPPSKPEKSASESPAPTASTPSTSSSTRFDMES
TSKRVAQDRSLLPFEAGEIGFGEPGTNGQHSFCQLIHQGRVIPADCVGYC
QFQCPVLLEGEPVANKLMSNFFAQPDGLAYDRTAEELEA*
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mRNA from alignment at L-elsbetiae_contig1523:18011..25281+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1523.3728.1 ID=mRNA_L-elsbetiae_contig1523.3728.1|Name=mRNA_L-elsbetiae_contig1523.3728.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7271bp|location=Sequence derived from alignment at L-elsbetiae_contig1523:18011..25281+ (Laminarionema elsbetiae ELsaHSoW15)
TGGCACCCGGGAGTTCTGCGCACGACACAAAGAGGAAGGCATGGTCCGTG
TTTCTGGCCGGTCCAGTGGGGACAGCCGAGCAAGTGGTAGGACTGATGAT
GCGGCAGAAATAGGTAGCGGCGCTCCTAGCCGTGCTGGTTCCTGTGGAAT
GCAGGGGAGTCGCGTTCCTATGCCCCCCGCTGCAGGTGCCTTTTCCGGCG
AGACCAGAAAGACCAACAAGCGTTCTGCTGATAGCGCGGACTTGCACCCA
GTTCGGGTGAAGAGCGAGACGGTCGATAACAGGCTTTCCGACGACGATGG
TTCTACGGCATGTCCGGAGACAGACGCTGTGGTGAAGGCGGAGGATGTCG
AGTTTCCTTGCAAGGTGGAGCCGACAAAGGCTGCAGGTGCATGAAAACAG
GCTGTTGGCGTCTTGTAGAGCTGTTGAACTTCCATGTGGGTGTAAAAGAG
AGACGATGATTGAAGGCAGACTCGACTACAGTAGTGCCACGCACAGCAAC
TGAAGCGGCGTGTAGATATGGCCGCTGCAGGCGCTTAGCGACGATGAGGT
TCAGTAACGGCGGCGAGACCGGCTTGGCAGTTTTACTTACATCGACATAC
CGCCTGCTTTTCATGCTTCGTGAGCGCTGGGGAGCGACGTGCTACAATAT
CGTGTGATTGTATGGAACAGAGAAGGCGTGTTGCACTGGCTTCGTGTTTT
GTTTTCCGGTGACCTATCCCTGTGTAAATTGAGGTGCCCAGCTTGAGCTG
CTACGTTAAGTCTGTTCTTGTCCCCCGCCGGGTTGGTTACCTTGTCTGCT
GCGGACACTACTCTTGTTGGTTCGCGCCAATATTTCCTAAAACACAAAGA
CCTTGGAGTTCGCCACCTAATCTGCCACATCACCTATCCACATGACCACC
ATCATGCTACCCGCCAGGCTTGTTTTTTTGCCTCTGAATACGGTGACCTC
ACCTGCTTGTTTGTCGTCCGGGTGTGACTCTTGTGCGCCCGCCTCCTCCC
GATCACTGCAGGCCGGGCAAGCGAAGCGAGGACGAAGCGGAGAAAGGCCG
CGGGGGGACAAGCGCGAGGTTCCTGATATTGCACCAACGGCAGCAACACC
GCAATGTATGCGGCGAACCGTGGCGAGGTAGATTAGCCACGAGCACTTGT
AATCCGCGAATCCACTGCAAAGCGTGTTGTTGTAACACAACGTCGTGGTT
TTGTGGAGCGTCGTCGGCTATCGCACATACGATAGCAATATGCGTTTGTT
TTCTTCTCTTGTGGCACGATAGACGTAGTTGTCTTGTAAACAGTACATGC
CGTGAATATTGAGGGTTTAGACTGCCATCTCGATCATGTGGCTATGCTCG
TGTCGCCTTTACTGTATTTCTGTCTGGGGGGTTGGGTTGTGTATTATTCT
TTGAGTTGGTTGTCGATGTCCTGATGTAGCCTAGTTCGAAGGACGCGACT
CATTTATCGCAGGCGACCATTGGTAGAACGATATCTCTCACGGTGGAGGT
CTTGCTTGCGGCGTCAGATCGTTCTGTTTTGTACTTGCAGCTGAGTTTCA
CACGGCTACGCTTTTGGCCGTGTTGTGCCCTTGCGTTTTTAGATGGTTGA
GCACTGCAGTTGCGAAGGGGTGCGGCACCAGTATTATGTTGAACTCATGT
TGATTTTCGGGTCTTCTAGAGGTTTGGCAGGTAGTTCAACCAGCTGTTTG
TTTTTGCGCCCCTGTAGCGGTGGGATGGGAAGTTGAGCTGCGGCGTGAGA
TTTTGATTTCGCCCTCTCCAAGCAGAAGGCGGAGGACCGACCACCTGAGA
AACTTGGCGGTGTCGGCCGACGAGCGGAGGCAAATGGAGGAGGACTAATG
CCTGGCGCTCGCGATGCAGAAGGGCGAGGTAGCTGCTGCGGGTGGTAGTG
GGCGAGGTGAGATCGCACTCGTGACCGTGCATGCCGGATGATAGTGGACT
AGACATGAACCTGAACCCTCCACACTACAGGGTACGGAATGTGGAATATT
CGTATTTTTAGGAGGCAGAGAAAGCCGTGATATTCATATACGTACACCAT
GGCTGTTTTCCTCGTCGCTTGCAGGCATGCCGGCCGAGCTCTCCCCGCAC
GGTGTACACTCTGCGGGTTTTGAACGCACCGGCTTGCATGCATGCGGCGC
GAGACACGAAACGGGCGCCGACTGCTAGAGAAGCTAGCGCGGTCCTAGGG
CCTGCTTTCTATCGCATGTTTGTTGCACCACTGCTTTTATCCCACCGCCA
CCCAAGCAACGACAACTAGCCGTTTCGCTTGACCATGCCTCTGTTTACCG
CAGTCTCCGAGGATAAGGATGGTGGTTGGCGGGCTCGACGTTACTCTCGA
ATCACGCGTTGCCCACCTTGAAAACGGCCGCAGCCGAAGGCGATCGGCTC
GAACCATTTGTCACTGCACCAGTCTGTGTGCGTGCTTGTTGGTGCTGACC
TTCGTCGCCAAGAAGACGAGTGAGAACGAACCACATGTCGACAGACCGAC
CACTGACGTTCTCCCTCGCCCGCCAATCACACGAACGGCAGCAACATTGG
CGGCGGCAATGGCGACGGCGGCACTGGCGGCTGGCGACCGAGTAACCGCA
GCAAGGGTAGCAAAAGAGTCGACGAGTGGGAGCTGGAGCGGCAAGCTTGG
ATCCAGAAGGTGCTGTACGCAGCCAGCCGACAGCAGTAGTCCACCCATCC
CTGTCTTGCAGTATGTACGTTACCGCTGGAGAAGAGGGAGGGGAGTGCCT
GTCTGCTGTATGCATGCGAACCGGCGGTCTGGGGTTAGGAGATGCGTCGG
TTTAGTACCACATTCTACAGCCGGTTTGGTGGGGGCGGTGGGTGAACACA
CGGCACGTCGGGTTGCGCGGGTGCCGCCTGCTCTATATATAGGTGATCTG
TGGTCAGACATTGCCGCCTTAGACCGAACGAAGGGGTGTCTCGGTTGACA
CTTTGGTTATGTCAATGGGTTTGCAGCATGACGTTGTTGCCAGAATAGCA
AGGGGTCCCAGCACACCCTACAAACTAAAACCTCTTCTTGTTTTCTGAGT
GTGTGCGACCACTGTTTGGGGCAGTTAACCGTAAGTTGCTATGCCCCCCC
CCCTTTGGACTCCCCCCCTTCTTCGCTACCTTCTTCGTAGATCTTATCCA
TCTCTGTGTATGTGTGTGTCTGTCGGTGCATATGTGTGAGGGTGTCTTTT
CCCCTCCCCCCCGGATAGATTTCTCCCCGGGATAGTGTTAAGAAAAGCAG
AAGACCCCCCTGGAACTTTGATGGCCCCCCGGGGGCCGTGCATCCGAAAA
ATGCAAGAGCCCCTCCCCGGGGGAAAATCAGAGTGACGGTACGAAGGCGT
GCGGCACAGGTATTGTCGTTATCCTCGCCTGACTGCCCCCCGTGGTCCCC
CCATGGGTATGTTCATAGTTTCCTGAGTTAAACGCCCTGCCTGCGTGACT
GGCGGTTGGACAGGCTCGAATCGCTGAGGCAAGTGAGCCCGTAACCGCCC
ACAACAGGCTCGGCGAGACGGGTTCTTTGCTCAACGAGACCAGCAGTGGA
GCGGCAGGAGAGGGTAGGGGTGGACCAGGAACTGGAAGGAGGCGAGGCAG
CCAAGAGGGGGGCAGAGACGGCGTCATCGGCGGCCGACGACGATGAGGTG
TGTGATCCATGGCACAGTAGTTCGGCTGGGGCCAGCGAAGCGATATCTAG
GCATCGTGCCGACATGGTGCTCCCGATGTTTGGGTTTGCATGGTATGGGC
GGGAGCGATGTGTAGTTGGCCCTGCCCCGCCGCTTGAACGTTTGACGTAA
AGTTGGCGTGGCAGGCGTACATGCTGTTTATATCACTATTTTCCCAGTCC
GGTGTTGTTGGCACACTATTATAACCCTCCCTCGCCGCCCTTGACTACAA
CATAGATATATGTACAAATGAGCATGCGTTCTCGCGTGCTGCGGTTTTGT
CTCTATCCCTTCCCCCCCTTTGTTCATCCCCCATGCCTTCCCTGCCACAC
TGCGGTACGCAAATTTTGGGTATTCTGGTTTCCGGTGCTCTCCCGAACAA
AAAGGTTGACATGGAGAGCAACGGCAAGCACGTGGCGCAGGGCGGGTCCG
TGCCCCCCTTCGAAGCCAGAGAAATCGGCTTCGGAAAGCCCGGCACCAAC
GGCCAGCACTCCCTCTACCAGCTCATCCACCAGGTATTTCTATCTACATA
CGAAGTATAAATACTGCTGTCCTAGCGAGTGACGGGGGCAACCCAAGTCA
AGGCCCTGCCTGCCGTGTACACATCGTATCTCTCTCATGCGGCGACGATA
GGCGGACCAGCTGCGTACAAAGGGGCCTGTGGATTCGCACATCACTGTTT
GAGTATATATCCCGGTTTCCTCGGAGGACTTACTCCCGCCCTTGTCGTAC
CTCTCAACAGTGTTGCACGCCGGTTTAAGGGGGCACCAGTCAGAAACACC
ATTTCGGCTGCTGTGCGGTTCGGCGACGACACTATATACAGATCTAAGGC
GCTGCGGCCGTAGAGTTCTGTCTTTCCTGTCTAATGACACCTGACTTGTC
AAATTCCTCCCCCTCTTGCCCTCAAACCCGACGAAACAAACTTTCGCAGT
TGTGCCGCAAATGACTGGTAAAAAAACTGCGGCGGAACCTCTCACCGGAT
GGCGCGTATATTTCCCCTGAGCCCGAGAACGCGTCGCCGACAGCACAGAT
CCGCTTCAAACTTTGCACATGAACTATAAACACTATTATCTTATGAGTTC
GCACCCAAGGTGGTGCGTCGAACTACACACAGCAGTAGACGAGAGGGGCG
TATTTCTAATAGAAGTTGCGTTTGCGCGACTGCGTAAGCTTAGCTTCCCC
CTCAACGGTTTAGGAAGGGTGCACTGGTATGTCAAAGAGGGTCTTGTGAA
GGTTTCTCAGCAGTTCGAGTTTTGCCGAACACGCGGTATAGACCGAAAAC
TCGCAATCGGCGCGAAGCAAGTTTTGAATTTGCGCCAATATTGTATGCAC
TCTTCGGATGATACAAAAACAAATCCAGCGGAAAATGCTGTAAAGCCAAG
TATTGCTTCGAGCCGATTGCGAGTTCTCGGCCTATCGTGCTGCAGCAAAA
GCCCAAGTGCTGAACGACCCTCATAACACCTCCTTTAATATTCCAGTGCA
CCCTTCTTAAAACCATTGAGGGGGAAGCTAAGCCTAAGCCGCCGCGCACA
GGCAACTTTAATGAGAAAATCGTCCCTCCTGACTGCCACTGCGTGTATTT
CGACGCGCCACTTTCGGTGCTAGGTCCTCATCATGCATGTAGTCTACGTG
CCACATTTTGTAACCATAGGTTCTGTCTGCGACGCGTTCTCGTTATTGTT
GGCAATCACGCGGAGGCATAGAGGTTGCCCCGCACAAACGTTTGCCAGCT
ATGTGTTTTCCTATTTTCTACATCGTGCAGCACTGTCAACAGATAATTCC
CCTTCCGAGCCCAACAGCGTATAATATACACCGCATCAATAAAGCCTGTT
CTCTCTGTCTCACACACACACACACACAAAGATACACAAACAGGGACGGG
TGAACCCCGCGGACTTCGTGGGGTACCGTCAGTCCCAGTGCCCTGTGCTG
GAGGGGAGGGCGGCGGCCAACTACGACGAGCTCGCGCTCTCTGTGCCTAT
CGTTGACAGACCCTCACAGCAAATAAATGCTTGTAGATACCATGTGTGAC
TCAGCTTCGTCCTCAAGAAGGCACGCATCGTCGTGCTGTGATTTGGTCTC
TCTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTACCACCCCCCCTTGTTC
ATCCCCCATCCCTTCCCTGTGTGCTGCCTACTGCGGCACGCAAATGTTTG
GTATTGTTTTTCGCTCTCCCATGCAAGTAGGTTTGACATGGAGAGCACCA
GCAAGCGCGTGGCCCAGGACAGGTCCTTACTTCCCTTCGAGGCCGGAGAA
ATCGGCTTCGGGGAGCCCGGCACCAACGGCCAGCACTCCTTCTGCCAGCT
CATCCACCAGGTATTTTTATCTAAATATACTGTCTTGCTAGTGACGGGAG
CAGCCTATTTCAAGGCTGTGCCTGCCGTGTACACACATTGCATCGGCCTC
GTGCGGTGACGATAAGGGGACCAGGTGCATACAAAGGGGCACGTGGATTC
GCACATCACTGTTTCAGTATATATACCGGCTTCCCTTGGACAGGCTTACT
CCCGACCGATGTAGTGCCCACCCTCCTAAACGACGTTTATATACCGCAAC
AATAACGCGTACTCTCTCTCTCTCTCCAACAACATATACACCGCATAAAT
TGCGCCTATTCTCTCTGTCTCCCACACACGAGACCAGGGACGGGTGATCC
CCGCAGACTGCGTGGGGTACTGCCAGTTCCAGTGCCCGGTGCTGCTGGAG
GGGGAGCCCGTGGCCAACAAGCTCATGTCCAACTTCTTCGCGCAGCCCGA
TGGCCTGGCGTACGACAGGACCGCCGAGGAGCTGGAGGCCTAGGGGGTGC
CGGAGTGGCTGCGCCCGCGCAAGGTGTAAAACCGGTGCTCTTGTTGTTGT
TGATGGTGGGTGTTTGGTGCATTTTGTGTGTGTTTTTTTTCAGTGGTGAT
GGTGGTGGCGGTGATGTTTTGTGTTGGCTCGTCATAGTGACGAAGGGTTG
TGTTCAGATGCTGGGCGTAGTGTACTTGGTACCGTGTGAGAACTCATGTG
GTTTTGTACGAGCATGAGATGCTCGGAGGTACCGATTTAAAACCACCAGA
TTTATTTCTATTCCGGGTGGGGGGACTGTCCGGTAGGCAATTTATTCTTA
TGCCGCATGTAGTGCTTCACCAGAATCCCCCGCCGCCCGAACATAGAGAG
TCGAAATTGTGGGCAAAATTTCATAGGGGATGCGGTCGGCTGTCGCCATT
TTAGGTTGTTGGTAGCGTTCCTTCCTTGTAATCGTAGAAAGAGCAGTGCG
CAGGTTCATTTGCTCCTTCAACTCCGTAATCCCCTTTGACCCATTCCGTT
CATATCTCATGTCTTGCGCAACCCCCCCTCTTGTATTCACTTTTCGACCC
CGGTTTTTCGTATCCTTTTGTTTGCGTGAAAACAAAAAAGGTCTTCACCG
AGAACCGGCCGTCGTGGTCGCTGCTCTTCCCGCAGCTGGACGCCTTCTCC
TGCGGGCAGCTGCTGGCCGTTTACGAGCACCGCACGGTGGTGCAGGGCTT
CGTGTGGGGGCTCAACTTGTTCAACCAGTGGAGGATGGAGCTCGGCAAGA
AGCTGGCCAACGAGATTGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1523:18011..25281+

>mRNA_L-elsbetiae_contig1523.3728.1 ID=mRNA_L-elsbetiae_contig1523.3728.1|Name=mRNA_L-elsbetiae_contig1523.3728.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=840bp|location=Sequence derived from alignment at L-elsbetiae_contig1523:18011..25281+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAGATGAGGTTGACATGGAGAGCAACGGCAAGCACGTGGCGCAGGGCG
GGTCCGTGCCCCCCTTCGAAGCCAGAGAAATCGGCTTCGGAAAGCCCGGC
ACCAACGGCCAGCACTCCCTCTACCAGCTCATCCACCAGGTTGACATGGA
GAGCAACGGCAAGCACGTGGCGCAGGGCGGGTCCGTGCCCCCCTTCGAAG
CCAGAGAAATCGGCTTCGGAAAGCCCGGCACCAACGGCCAGCACTCCCTC
TACCAGCTCATCCACCAGGTTTGACATGGAGAGCACCAGCAAGCGCGTGG
CCCAGGACAGGTCCTTACTTCCCTTCGAGGCCGGAGAAATCGGCTTCGGG
GAGCCCGGCACCAACGGCCAGCACTCCTTCTGCCAGCTCATCCACCAGGT
TTGACATGGAGAGCACCAGCAAGCGCGTGGCCCAGGACAGGTCCTTACTT
CCCTTCGAGGCCGGAGAAATCGGCTTCGGGGAGCCCGGCACCAACGGCCA
GCACTCCTTCTGCCAGCTCATCCACCAGGGACGGGTGATCCCCGCAGACT
GCGTGGGGTACTGCCAGTTCCAGTGCCCGGTGCTGCTGGAGGGGGAGCCC
GTGGCCAACAAGCTCATGTCCAACTTCTTCGCGCAGCCCGATGGCCTGGC
GTACGACAGGACCGCCGAGGAGCTGGAGGCCTAGGGACGGGTGATCCCCG
CAGACTGCGTGGGGTACTGCCAGTTCCAGTGCCCGGTGCTGCTGGAGGGG
GAGCCCGTGGCCAACAAGCTCATGTCCAACTTCTTCGCGCAGCCCGATGG
CCTGGCGTACGACAGGACCGCCGAGGAGCTGGAGGCCTAG
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