mRNA_L-elsbetiae_contig1520.3713.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1520.3713.1
Unique NamemRNA_L-elsbetiae_contig1520.3713.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1520.3713.1 vs. uniprot
Match: D8LEZ0_ECTSI (SGNH_hydro domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ0_ECTSI)

HSP 1 Score: 486 bits (1252), Expect = 1.330e-170
Identity = 249/335 (74.33%), Postives = 278/335 (82.99%), Query Frame = 1
Query:    1 MAMREFWLLTTFFLVALRRALTVAWIRINKFLTNPDWLIRPVTSFRHKVVIIGDGFAEGLGDWVVMGGMAGVTRVLEKHAGSDDKVRTNWQIINRGRAGSVSADWLPSDEKSLYHRKARAAACKDAEIFVVALGTMDVVGECVGMPVAAMRKTALDTFEEDEVCDTVKNLREICDALRAEGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYTRATAAEPXXXXXXXSAETPQAAQEGPRVELVKMNNPRASRDDGRAFDGLHLNARGYRAFAGALYEALGPMLVAVEWKVWRSKLAEGLXXXXXXXXXXXAAPTAPASDENVKPKSKRNKKAD 1005
            MA REFWLLT++ LVALRRALTV WIRINKFL  PDW+IRPV  FRHKVV+IGDGFAEG+GDWVVMGG AGVTR+LEK AGSD+KVRT W IINRGRAGS+S+DWLPSD KSLYHRK ++ AC+DAEIFVVALGTMDVV +CVGMPV+AMRKTALDTFEE E+CDTVKNLREICDALRAEGKKV+VCNVMTSGAGINRR GTAKR+NRQLALY +ATA          +A+   A + G  VE+VKMNNPRA+R+DGRAFDGLHLNARGYRAFA A+YE +GPM+VAVEWKVW+SKLA GL            A  AP S E  +PKSK NKKAD
Sbjct:    1 MATREFWLLTSYLLVALRRALTVTWIRINKFLMKPDWVIRPVADFRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSEACRDAEIFVVALGTMDVVNDCVGMPVSAMRKTALDTFEEGEICDTVKNLREICDALRAEGKKVVVCNVMTSGAGINRRTGTAKRINRQLALYGKATATA--------TAKGETAPKGGQPVEVVKMNNPRAAREDGRAFDGLHLNARGYRAFASAVYEVVGPMMVAVEWKVWKSKLAAGLTNGAG------GAAVAPISGEGFEPKSKSNKKAD 321          
BLAST of mRNA_L-elsbetiae_contig1520.3713.1 vs. uniprot
Match: A0A024U869_9STRA (SGNH_hydro domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U869_9STRA)

HSP 1 Score: 141 bits (356), Expect = 3.300e-36
Identity = 91/284 (32.04%), Postives = 141/284 (49.65%), Query Frame = 1
Query:   43 VALRRALTVAWIRINKFLTNPDWLIRPVTSFRHKVVIIGDGFAEGLGDWVVMGGMAGVTRVLEKHAGSDDKVRTNWQIINRGRAGSVSADWLPSDEKSLYHRKARAAACKDAEIFVVALGTMDVVGECVGMPVAAMRKTALDTFEEDEVCDTVKNLREICDALRAEGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYTRATAAEPXXXXXXXSAETPQAAQEGPRVELVK-MNNPRASRDDGRAFDGLHLNARGYRAFAGALYEALGPMLVAVEWKVWRSKL 891
            VA+R A    W+R  ++LT P  L+     ++HK+VIIGDGFA G GDW+ M    G+++ L +    +DK+R  WQ+INRG   + S+ W P+     +         +DA+I +V +G++D           + RK    + E+     TV N++ ICDALR +GK+V V ++    A  +    T +  N+ L  Y  +T  +          + P        V+L   ++ P   R D +AFDG H NA+ Y+  A      L P+L AVEW  W+ +L
Sbjct:   10 VAVRTAAAWLWLRFCRWLTQPLRLVLKANEYQHKIVIIGDGFAAGFGDWITMATSGGLSQYLAQEVAKEDKIRHRWQVINRGILDTDSSQWHPTSSTKYFQDVFSVPQLRDADIVMVIVGSID-----------SRRKNPSISPEQ-----TVCNIQAICDALRKKGKRVCVGSLCH--ADFDTENETHRVTNQALVDYCESTKMD----------DLP--------VKLTPDLSTPVVRRSDSKAFDGYHFNAKAYQQIARDSMAVLTPLLTAVEWATWKKQL 257          
BLAST of mRNA_L-elsbetiae_contig1520.3713.1 vs. uniprot
Match: W4FUK0_9STRA (SGNH_hydro domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FUK0_9STRA)

HSP 1 Score: 139 bits (351), Expect = 1.610e-35
Identity = 85/283 (30.04%), Postives = 135/283 (47.70%), Query Frame = 1
Query:   43 VALRRALTVAWIRINKFLTNPDWLIRPVTSFRHKVVIIGDGFAEGLGDWVVMGGMAGVTRVLEKHAGSDDKVRTNWQIINRGRAGSVSADWLPSDEKSLYHRKARAAACKDAEIFVVALGTMDVVGECVGMPVAAMRKTALDTFEEDEVCDTVKNLREICDALRAEGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYTRATAAEPXXXXXXXSAETPQAAQEGPRVELVKMNNPRASRDDGRAFDGLHLNARGYRAFAGALYEALGPMLVAVEWKVWRSKL 891
            VA+R  +   W+R  ++   P  L+     + HK+VIIGDGFA G GDW+ M    G++  +      +DK+R  WQ+INRG   + S+ W P+     +         +DA++ +V +G+MD           A RKT   +   D+   T++N++ ICDALR +GK+V V ++  S   +       + +N+ L  +  +TA +                   P      ++ P   R D +AFDG H NA+ Y+  A      L P+L AVEW  W+ +L
Sbjct:    6 VAVRTFIAWLWLRFCRWCAQPLRLVLKSNEYYHKIVIIGDGFAAGFGDWITMASSGGLSEYIAHEISKEDKIRHKWQVINRGIVDTDSSQWHPTSSTKYFQSVMSTPQLRDADVVLVVVGSMD-----------ARRKTP--SISPDQ---TLRNIQAICDALRKKGKRVCVGSLCHSD--VVTECDGHRSINQALVDFCASTATDAF-----------------PVKITPDLSTPVVRRSDAKAFDGFHFNAKAYQQIARDSMMVLTPLLTAVEWSTWKKQL 253          
BLAST of mRNA_L-elsbetiae_contig1520.3713.1 vs. uniprot
Match: A0A6G0XR96_9STRA (SGNH_hydro domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR96_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.340e-34
Identity = 91/284 (32.04%), Postives = 130/284 (45.77%), Query Frame = 1
Query:   43 VALRRALTVAWIRINKFLTNPDWLIRPVTSFRHKVVIIGDGFAEGLGDWVVMGGMAGVTRVLEKH-AGSDDKVRTNWQIINRGRAGSVSADWLPSDEKSLYHRKARAAACKDAEIFVVALGTMDVVGECVGMPVAAMRKTALDTFEEDEVCDTVKNLREICDALRAEGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYTRATAAEPXXXXXXXSAETPQAAQEGPRVELVKMNNPRASRDDGRAFDGLHLNARGYRAFAGALYEALGPMLVAVEWKVWRSKL 891
            VA+R      W+R+ ++   P  LI P   FRHK+VIIGDGFA G GDWV M    G+ R +    A  + KVR  WQ+INRG   + S+ W P+     +         +DA+I +V +G+MD           + R   +   +      TV N++ ICDALR +GK+V +  +  S          A   N+QL  Y   T+ +                   P      ++ P   R D +AFDG H N++ Y+  A      L PML AVEW  W+ +L
Sbjct:   10 VAIRTFFAWIWLRLCRWCAQPLRLILPSNEFRHKIVIIGDGFAAGFGDWVTMDSPGGLARYIANEIAQEESKVRHKWQVINRGILDTDSSQWHPTASTKYFQDTFSKHQLRDADIVLVIVGSMD-----------SKRSPPIPPSQ------TVTNIQSICDALRKKGKRVCIGTLCHSDVEAQNEIHRAT--NKQLLEYCNETSGDDL-----------------PVKMTPDLSLPIVRRPDAKAFDGFHFNSKAYQQIAHEAMTVLTPMLTAVEWITWKKQL 257          
BLAST of mRNA_L-elsbetiae_contig1520.3713.1 vs. uniprot
Match: A0A485L2D1_9STRA (Aste57867_14724 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2D1_9STRA)

HSP 1 Score: 136 bits (343), Expect = 2.620e-34
Identity = 86/286 (30.07%), Postives = 129/286 (45.10%), Query Frame = 1
Query:   43 VALRRALTVAWIRINKFLTNPDWLIRPVTSFRHKVVIIGDGFAEGLGDWVVMGGMAGVTRVLEKHAGSDDKVRTNWQIINRGRAGSVSADWLPSDEKSLYHRKARAAACKDAEIFVVALGTMDVVGECVGMPVAAMRKTALDTFEEDEVCDTVKNLREICDALRAEGKKVIV---CNVMTSGAGINRRAGTAKRLNRQLALYTRATAAEPXXXXXXXSAETPQAAQEGPRVELVKMNNPRASRDDGRAFDGLHLNARGYRAFAGALYEALGPMLVAVEWKVWRSKL 891
            V +R      W+R  +++  P  L+     F HK+VIIGDGFA G GDWV M    G+ + + K   ++ K+R  W++INRG   S SADW P+ +   +         +DAE+ +V +G++D+                   +      +T+KN++ ICDAL  +GK+V V   C++             A RL  +  L                   T  +A E P      ++ P   R D +AFDG H N++ Y+  A      L P L AVEW  W+ KL
Sbjct:   11 VTVRTFFAWLWLRYCRWVAQPIRLVPRSNEFVHKIVIIGDGFAAGFGDWVTMDSAGGLAQYIAKEIVNEPKIRHKWKVINRGILNSDSADWHPTSQTKYFQDVFSTRQLRDAEVVLVIVGSIDI-----------------RRYPRIPAAETLKNIQSICDALTKKGKRVCVGSLCHIDIEAQN------EAHRLENKAIL----------------DLCTDTSADELPIKMAPDLSTPIVRRADSKAFDGFHFNSKAYQQIARDTMTVLTPTLTAVEWTTWKKKL 257          
BLAST of mRNA_L-elsbetiae_contig1520.3713.1 vs. uniprot
Match: T0QG23_SAPDV (SGNH_hydro domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QG23_SAPDV)

HSP 1 Score: 132 bits (332), Expect = 1.030e-32
Identity = 83/274 (30.29%), Postives = 130/274 (47.45%), Query Frame = 1
Query:   73 WIRINKFLTNPDWLIRPVTSFRHKVVIIGDGFAEGLGDWVVMGGMAGVTRVLEKHAGSDDKVRTNWQIINRGRAGSVSADWLPSDEKSLYHRKARAAACKDAEIFVVALGTMDVVGECVGMPVAAMRKTALDTFEEDEVCDTVKNLREICDALRAEGKKVIVCNVMTSGA-GINRRAGTAKRLNRQLALYTRATAAEPXXXXXXXSAETPQAAQEGPRVELVKMNNPRASRDDGRAFDGLHLNARGYRAFAGALYEALGPMLVAVEWKVWRSKL 891
            W+R+ +++  P   I P + +RHK+VIIGDGFA G GD++      G+ + L      + K+R NWQ+INRG   + S+ W P  +   +         +DA+I +V +G+MD           A R   +    E EV  T++N++ ICDAL  +GK+V V  +  S    IN +     +L R   + T+                      E P +    +  P   R + +AFDG+H N+ GY+  A    + + P+  AVEW  W+ KL
Sbjct:   20 WLRLCRWIQQPPRAILPTSEYRHKIVIIGDGFAAGYGDYINFDSPGGLAKYLHAAMAQEAKIRHNWQVINRGIVDTDSSQWTPMADTKYFQTVFSKKEYRDADIVLVVVGSMD-----------AQRSPPI----EPEV--TLRNIKSICDALTKKGKRVAVGTLCHSDIKAINVKHTATNKLLRDFCVDTQ--------------------HDELPVMCAPDLAIPMVRRPEAKAFDGIHFNSSGYKQIAKDAMDVIQPLATAVEWTTWKKKL 256          
BLAST of mRNA_L-elsbetiae_contig1520.3713.1 vs. uniprot
Match: A0A0W8C468_PHYNI (SGNH_hydro domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C468_PHYNI)

HSP 1 Score: 132 bits (332), Expect = 1.050e-32
Identity = 94/293 (32.08%), Postives = 140/293 (47.78%), Query Frame = 1
Query:   40 LVALRRALTVAWIRINKFLTNPDWL--IRPVTSFRHKVVIIGDGFAEGLGDWVVMGGMAG-VTRVLEKHAGSDDK----VRTNWQIINRGRAGSVSADWLPSDEKSLYHRKARAAACKDAEIFVVALGTMDVVGECVGMPVAAMRKTALDTFEEDEVCDTVKNLREICDALRAEGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYTRATAAEPXXXXXXXSAETPQAAQEGPRVELVKMNNPRASRDDGRAFDGLHLNARGYRAFAGALYEALGPMLVAVEWKVWRSKLAE 897
            LVALR  L + W  I  FL     +  ++P + F HKVVIIGD FA G+GD++ +GG  G + + L+K    DDK    VR NW IIN G  GS +ADWL S  K  +     ++   DA I ++ LG+ ++                     E E+    +NL EICD LR +GK+V +  V++     +     +  LN  L  + ++T+ E          E P     GPR++          R+    +D  H N++ YR  A    + L PM+ AVEW  W+ +L++
Sbjct:    2 LVALRAFLALVWWHICHFLAYNLHVRGLKPSSQFFHKVVIIGDDFAAGIGDYITIGGAGGGIAQYLKKIVAYDDKASGAVRHNWAIINAGVPGSTTADWLMSSPKKYFKNVFTSSVMSDASIVIIILGSTEIRNSGTA---------------EHEI---KRNLMEICDTLRKKGKQVCLATVVSPEPTASEMDSASSTLNTALEQFCKSTSTE----------EAPVIL--GPRLDTYAFR-----RESALCYDKYHFNSQSYRQLARNTADFLIPMMTAVEWTTWKEQLSQ 259          
BLAST of mRNA_L-elsbetiae_contig1520.3713.1 vs. uniprot
Match: A0A329T1V1_9STRA (SGNH_hydro domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T1V1_9STRA)

HSP 1 Score: 130 bits (326), Expect = 7.100e-32
Identity = 92/289 (31.83%), Postives = 136/289 (47.06%), Query Frame = 1
Query:   40 LVALRRALTVAWIRINKFLTNPDWL--IRPVTSFRHKVVIIGDGFAEGLGDWVVMGGMAG-VTRVLEKHAGSDDKVRTNWQIINRGRAGSVSADWLPSDEKSLYHRKARAAACKDAEIFVVALGTMDVVGECVGMPVAAMRKTALDTFEEDEVCDTVKNLREICDALRAEGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYTRATAAEPXXXXXXXSAETPQAAQEGPRVELVKMNNPRASRDDGRAFDGLHLNARGYRAFAGALYEALGPMLVAVEWKVWRSKLAE 897
            L  LR  L + W  I  FL     +  + P + F HKVVIIGD FA G+GD++ +G   G +   L+K    DDKVR NW IIN G  GS +ADWL S  K  +     + A  D  I ++ LG+            A +R ++ D  E         +L EICD LR +GK+V +  V +     +     +  LN  L  + ++T+ E          E P     GPR++          R+   ++D  H N++ YR  A    + L PM+ AVEW  W+++L++
Sbjct:    2 LATLRAFLALLWWYICHFLAYNLHVRGLNPASQFFHKVVIIGDDFAAGIGDYISVGSAGGGIAEYLKKIVAFDDKVRHNWAIINAGVPGSTTADWLMSSPKKYFKNVFTSRAMSDVSIVIIILGS------------AEIRNSSSDGHEMKH------HLMEICDTLRKKGKQVCLATVASPDPTASETDSASSTLNTALEQFCKSTSTE----------EAPVIL--GPRLDTYAFR-----RESALSYDKYHFNSQSYRQLACNTADFLIPMMTAVEWTTWKAQLSQ 255          
BLAST of mRNA_L-elsbetiae_contig1520.3713.1 vs. uniprot
Match: A0A6A3RM93_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RM93_9STRA)

HSP 1 Score: 127 bits (319), Expect = 7.370e-31
Identity = 93/288 (32.29%), Postives = 136/288 (47.22%), Query Frame = 1
Query:   40 LVALRRALTVAWIRINKFLTNPDWL--IRPVTSFRHKVVIIGDGFAEGLGDWVVMGGMAG-VTRVLEKHAGSDDKVRTNWQIINRGRAGSVSADWLPSDEKSLYHRKARAAACKDAEIFVVALGTMDVVGECVGMPVAAMRKTALDTFEEDEVCDTVKNLREICDALRAEGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYTRATAAEPXXXXXXXSAETPQAAQEGPRVELVKMNNPRASRDDGRAFDGLHLNARGYRAFAGALYEALGPMLVAVEWKVWRSKLA 894
            L ALR  L + W  I  FL +   +  ++P + F HKVVIIGD FA G+GD+V +G   G +   L+K    DDKVR NW IIN G  GS +ADWL S  K  ++    + A  DA I ++ LG++++       P AA  +               +NL EICD LR +GK+V +  V +           +  LN  L  + ++T+ E          + P     GPR++          R+     D    N++ YR  A    + L PM+ AVEW  W+ +L+
Sbjct:    2 LEALRVFLALVWWHICHFLAHNLHVRGLKPASQFFHKVVIIGDDFAAGVGDYVTVGSAGGGIAPYLKKIVSHDDKVRHNWAIINAGVPGSTTADWLLSSPKKYFNNVFTSRAMADASIVIIILGSVEIRN-----PAAAGHEMR-------------RNLVEICDTLRKKGKQVCLATVASPDPTATETDSASSTLNTALEHFCKSTSTE----------DAPVIL--GPRLDTYAFR-----RESALWIDKYRFNSQSYRQLARNTADFLIPMMTAVEWTTWKEQLS 254          
BLAST of mRNA_L-elsbetiae_contig1520.3713.1 vs. uniprot
Match: A0A1V9ZUG2_9STRA (SGNH_hydro domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZUG2_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.110e-30
Identity = 87/284 (30.63%), Postives = 129/284 (45.42%), Query Frame = 1
Query:   43 VALRRALTVAWIRINKFLTNPDWLIRPVTSFRHKVVIIGDGFAEGLGDWVVMGGMAGVTRVLEKHAGSDDKVRTNWQIINRGRAGSVSADWLPSDEKSLYHRKARAAACKDAEIFVVALGTMDVVGECVGMPVAAMRKTALDTFEEDEVCDTVKNLREICDALRAEGKKVIVCNVMTSG-AGINRRAGTAKRLNRQLALYTRATAAEPXXXXXXXSAETPQAAQEGPRVELVKMNNPRASRDDGRAFDGLHLNARGYRAFAGALYEALGPMLVAVEWKVWRSKL 891
            V +R  L   W+R+ +++  P   I P + +RHK+VIIGDGFA G GD++      G+ + L      D K+R NWQ++N G   + S+ W P      +H     A  KDA+I +V +G+MD           A R   +   E      T++NL+ I DAL  +GK+V +  +     A  N     A +L R     T+               + P     GP + L  +  P A     +AFDG H N+  Y+  A    + + PM  AVEW  W+ KL
Sbjct:   10 VTVRSYLAWFWLRLCRWVQQPARAILPTSEYRHKIVIIGDGFAAGYGDYITFDSPGGLAKYLRAAMSQDAKIRHNWQVLNCGIVDTDSSQWTPMASTKYFHDIFSKAEYKDADIVLVMVGSMD-----------ATRTPPIAPEE------TLRNLKSIADALTKKGKRVALAPLCHCDLAAQNDVHVAASKLIRDFCTDTQ-------------HDDLPVVC--GPNLALPMVRRPEA-----KAFDGFHFNSSAYKQIAQDAMDVVQPMATAVEWTTWKKKL 256          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1520.3713.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEZ0_ECTSI1.330e-17074.33SGNH_hydro domain-containing protein n=2 Tax=Ectoc... [more]
A0A024U869_9STRA3.300e-3632.04SGNH_hydro domain-containing protein n=1 Tax=Aphan... [more]
W4FUK0_9STRA1.610e-3530.04SGNH_hydro domain-containing protein n=3 Tax=Aphan... [more]
A0A6G0XR96_9STRA1.340e-3432.04SGNH_hydro domain-containing protein n=1 Tax=Aphan... [more]
A0A485L2D1_9STRA2.620e-3430.07Aste57867_14724 protein n=1 Tax=Aphanomyces stella... [more]
T0QG23_SAPDV1.030e-3230.29SGNH_hydro domain-containing protein n=1 Tax=Sapro... [more]
A0A0W8C468_PHYNI1.050e-3232.08SGNH_hydro domain-containing protein n=15 Tax=Phyt... [more]
A0A329T1V1_9STRA7.100e-3231.83SGNH_hydro domain-containing protein n=2 Tax=Phyto... [more]
A0A6A3RM93_9STRA7.370e-3132.29Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A1V9ZUG2_9STRA1.110e-3030.63SGNH_hydro domain-containing protein n=1 Tax=Achly... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1520contigL-elsbetiae_contig1520:16913..21791 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score489.6
Seed ortholog evalue1.2e-135
Seed eggNOG ortholog2880.D8LEZ0
Hectar predicted targeting categorysignal peptide
EggNOG OGs2AVME@1,2RZWN@2759
Ec32 ortholog descriptionSGNH hydrolase-type esterase domain
Ec32 orthologEc-21_006070.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1074
Cds size1008
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1520.3713.1prot_L-elsbetiae_contig1520.3713.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1520 16979..21791 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815619.002156-UTR-L-elsbetiae_contig1520:16912..169781622815619.002156-UTR-L-elsbetiae_contig1520:16912..16978Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1520 16913..16978 -
1691682994.919387-UTR-L-elsbetiae_contig1520:16912..169781691682994.919387-UTR-L-elsbetiae_contig1520:16912..16978Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1520 16913..16978 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815619.019481-CDS-L-elsbetiae_contig1520:16978..174371622815619.019481-CDS-L-elsbetiae_contig1520:16978..17437Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1520 16979..17437 -
1691682994.932913-CDS-L-elsbetiae_contig1520:16978..174371691682994.932913-CDS-L-elsbetiae_contig1520:16978..17437Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1520 16979..17437 -
1622815619.0318544-CDS-L-elsbetiae_contig1520:17710..179261622815619.0318544-CDS-L-elsbetiae_contig1520:17710..17926Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1520 17711..17926 -
1691682994.9447882-CDS-L-elsbetiae_contig1520:17710..179261691682994.9447882-CDS-L-elsbetiae_contig1520:17710..17926Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1520 17711..17926 -
1622815619.0413659-CDS-L-elsbetiae_contig1520:18602..186801622815619.0413659-CDS-L-elsbetiae_contig1520:18602..18680Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1520 18603..18680 -
1691682994.9564693-CDS-L-elsbetiae_contig1520:18602..186801691682994.9564693-CDS-L-elsbetiae_contig1520:18602..18680Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1520 18603..18680 -
1622815619.051042-CDS-L-elsbetiae_contig1520:21200..213111622815619.051042-CDS-L-elsbetiae_contig1520:21200..21311Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1520 21201..21311 -
1691682994.967478-CDS-L-elsbetiae_contig1520:21200..213111691682994.967478-CDS-L-elsbetiae_contig1520:21200..21311Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1520 21201..21311 -
1622815619.061398-CDS-L-elsbetiae_contig1520:21647..217911622815619.061398-CDS-L-elsbetiae_contig1520:21647..21791Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1520 21648..21791 -
1691682994.9811165-CDS-L-elsbetiae_contig1520:21647..217911691682994.9811165-CDS-L-elsbetiae_contig1520:21647..21791Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1520 21648..21791 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1520.3713.1

>prot_L-elsbetiae_contig1520.3713.1 ID=prot_L-elsbetiae_contig1520.3713.1|Name=mRNA_L-elsbetiae_contig1520.3713.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=336bp
MAMREFWLLTTFFLVALRRALTVAWIRINKFLTNPDWLIRPVTSFRHKVV
IIGDGFAEGLGDWVVMGGMAGVTRVLEKHAGSDDKVRTNWQIINRGRAGS
VSADWLPSDEKSLYHRKARAAACKDAEIFVVALGTMDVVGECVGMPVAAM
RKTALDTFEEDEVCDTVKNLREICDALRAEGKKVIVCNVMTSGAGINRRA
GTAKRLNRQLALYTRATAAEPAAPAAPRSAETPQAAQEGPRVELVKMNNP
RASRDDGRAFDGLHLNARGYRAFAGALYEALGPMLVAVEWKVWRSKLAEG
LAEGLASGALGGAAPTAPASDENVKPKSKRNKKAD*
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mRNA from alignment at L-elsbetiae_contig1520:16913..21791-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1520.3713.1 ID=mRNA_L-elsbetiae_contig1520.3713.1|Name=mRNA_L-elsbetiae_contig1520.3713.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4879bp|location=Sequence derived from alignment at L-elsbetiae_contig1520:16913..21791- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGATGCGAGAGTTCTGGCTGCTCACGACCTTCTTCCTTGTTGCCTT GAGGCGGGCTCTGACCGTGGCTTGGATTCGTATCAACAAGTTCCTCACCA ACCCGGACTGGCTGATCAGACCAGTCACATCGTTTCGGCACAAGGTACGG CGTGCTCAATTCTCTTTCCTGTGTATCCTTGCCGAGCTCTTCAATGACAA CAAAGAGTTGCTCCCATATCTCACTCCGCGGACGGAGAAGGGAAATGACG TTTCTCCGGCTGCATGCTCTCTGGGCTCTTGGCCCTCTGGGTGCCCAATT AATATTCTAGAGCAGCGCCGAAGGTCTTCTCGTGGCGGGGACCTCAGCCA CAAGTGTGTGTGTACATCCTGATTGAGGCGTATAATCAAGCTGTGGCCTC GCTTTGGCGAGATTAGGGTGAGGGGTGCCTGGGTCTTGGTGTGTCGGTTG ACGGTCACGATCCGTGCTGCTCTGCCCCAGGTGGTGATTATCGGAGATGG TTTCGCGGAAGGCCTCGGGGACTGGGTCGTCATGGGGGGGATGGCTGGTG TCACGCGGGTGCTCGAGAAACACGCCGGATCAGACGATAAGGTGCGTTCG GGCGATCTATCGTAACGTAGAGAACCATAATCGGGAATGTATTTTTGTTT TTTAGCGAATTCGGACCTCCTGGGGATTGCCGAGGTTGATGTCGAGGTTG ATAGGAGGGGATCTCAACTGACTCTGTCTGCAGTTACGTAAACTGCGAGT ATACTGACTGTCGACTCGCGGTTTCTTCCATCTAGCTGGTACACACAACG AAAAAACATACTGTTGCACTTGCCATGCCAGCTGCCTGTAATGCTGATTG ATGGTGGTGGTATGCCCTCTTTTGGCCCTGTTCGGGGGGTCCGGCAGATG TGATTCGGTTTGCAGAACCCTTCCACAACCCATAGGGATACAAAATGGAC GTCTTGTGGGAGATATAACATGGCTTGGGGAGCCCGAACACAGATTGTGA TGGTTTGCATACTGAGTAAAGGTGAGTTGCAAGAGGAAGAGCCGCTCATG GTGGTCGCGAAACTTGCCTCGTCAATTGGAATCAGCCGCCGCGAAAATTG GTACAATTGTAGCAGAAAATGTGAACCGATACCACGCAAGATAAATCTCC CATACACACTACACAAGATACCACCTCCCCTCGGAGAGAGGAGAGGATGC GTGTTTTCCACTTGGAAATTGAGTTGGAGAACTGCTCCGACACGATCACG GATTTATCGCGCTAAGTTTACCGAGCTCGAACACATGAACAGATGGGTGC CGCAAAAAGCCAATGACGTTGGTGTTTGTGACCGCTGCCTATTTTCAGAC GTGGAAGTCCTAATCAATTAGATGGCGCCCTCCCAAAAACAGCGGTGCAG CCAGAGAGCACTGGGATGTTGGGTGTTGGATGACCCCCGCACCCAGCACA GACCGCAAACAAAGGGGCTAAACCCAACCCAGTACCACCAACAGTACGTG ATCCTATGGATTCCCGTCTCTTTTGGTGGTTCGGGTTGGCTAGGTGGGCT GCAGCGGTGATCTGGTGTGCCCGCAGCGTCTCCGGGGATGTTCGAAGATA TTCCCCAACTCAAAAAACGCCTGGATCTCTCTGCTGGTATATCTGGGAAG CGTTTTTTTGCCTCACAAGCCCCACACATCATCATCTCGCCTACCTCCTT CGGCGTTGTTTACCCATAAATATATCCCTAACCTACTGGATCGTGCCGTT ATCAGCCAAAACGGTGGGCTTCAGCTTTGGCGGCACAGAAAATGTCGATA CTATTTGTCTGCGGGCCCCCGGGGCGCAATACCACCGCGGGACTATTTCC TTACAGTGGCTCGTACAATCAAAAATGTTCAACGGGGTCTACGCAGATGG GATGATCCCTCTTCAGCCGGAAGTATTTTTTTTTTTTGCTGAGCTGATTT GATACACCACCTTGCGGAGCGACCATGCTCCTCACAGGCCCCGGCTTGCT GTAAAAATTGAACAAGGCCTCAGATATGTCCTATTTCGACGTCCGCAAGT ATTGTAGTTTGTATGTTTTCGTTTGGCGCTGAGCTTCGTAGCAACTGGAA GAAGCCAGTTTGCTGCCGCTTTTCAGGCTCAATTTGGGCCCCACGGCAGC GAACTTCACACGGCTGTTGGCCGCCCAAGGAGCTCACGAAATCCCTAGGT GCTTCGGAACAGACCAGTGGAGGGACATACATATAAAATTGCGCAGACGC TGGGCAGAATTTTGGATCCCAGGCATGACGGCCATGCCAACGAATGCCCA AAGCCACCCCTCTTTACAGGAGGAGAGCAAATCACGCACCATGAATCTAC CTCCAATGATATTGATTTTTTTGCGCGAAAATCTCCCCGATTTGAACCTT GGTCGCGGTGTTGGCGATCGCAAAACGTGTCCTCAACAGCTTTGTGGTGG TACCACGCTGTAGAGGAAGTCAAACAGAATGTTTCGAAGGTAGGAATAAT TTTGGATCGCAGCTACGGCCAGAGCCATCGTGGAAAGATTGCCCAGCCCG AAGGCGAAGCGGGCCAGCGGGGGTTCCGAAATTTCGGTGCTCGTGAACAA AAAAATCGAAAAAGCCCGTCCTGCAATCCGGGTGTAGGTACACACATGCC CCGAAAAACAAATTCCGGCCTGCCTGCACGTGTGTGTACGGTGGATTCGG ACCGGCGTGATGAAAGATTTAAAGTTCTGTCCTTGTCTGTTTGGAGACCA TGGTAACATCATTTTCTGGCGGGGTCATTTGTGACGAGAATTGAGATAGA TACCCGTGTCGGTTGGCCCTATTACTGCCGCAGCTTACCTCAAAACCTCA TTTTTTTTTTGTATGCATGCATGTCTATGCGCTCGTCGCGTGGTCGTTGC TGCTGTCTGTCCGTTTTCTTGATGGATTGGGTGTGGGTTTGTGAGGGCGC TCCGTTGCGTACGACGGAAAAAAAAACACGCCGACAGGAGTTATTGTGCT CCCAAATCCGAATCCAATCAAAACCCTGCTTTGTCGCTGTGGTGCTCTTT TCTCACTGGCTTCTTGCTTTTGATGTCACGCCTGCTCTGTGCCCGAATCT ATTCTATTTAGGTGCGCACGAATTGGCAGATCATAAATCGGGGGCGAGCC GGGAGCGTATCTGCCGACTGGCTGCCATCCGATGAAAAGGTGACGGACTC GCTGCTGTTGTTAGGCGCACATTGATTATGGGCTTCATGCTCGCGCCTTA GAAGCTAGCTGCGCACTGACCTCTTGTGCGTATCATAGCTCTGGCGCGTT AGTGGCGACGGGCTTCCGAAGGACTACGTAGTAGCCGCGACGACAAGCAG CTGCTGTGTTTTGTTGTTGCTGTTTTCCGATCCCTTCCCCCCGCCTCGTA GACTACTTTTTCTACGGCAGGTATTGAAGGTAGGTATACCGTAATCATGC GGGTTATCGCACCCCCGTGTCAGCGTTTTTCTATAGCGTATGCCTCCTTA TTGCGGTAGGTATACTACTGCTGTACATTGTTTGGATGGGACACCCCGAG ACGGTGCGATTCTTCGTTGGCTCAAGAGCTCGTGACAGGCGGCTATCTGC AAGTGAAAACTGCTGTCCTTGGTGTCTCCTCCTAGTTTTATTTCGAGGTG GCGTTTTCGTAACTGCTGTGAGCACGAGGATAAACCGCCGGTCTCACTGT ACGACAGTATGTAGTGGCGCACCCGTTGCTACAATATGTTGCCTATACGA TTACAAATTGCATCCATGGCCTCAAGGGGAGTTCTAACCTGGCCTGCCTC GCACCTCCCCCCCGCTCTCCCGTTCCCACATCGGCCCCCCGGCCTGTCTT ATGTTAACATAACAGTCGCTTTATCACAGGAAGGCGCGCGCCGCGGCCTG CAAAGACGCGGAGATTTTTGTGGTGGCATTAGGGACGATGGACGTTGTCG GAGAGTGCGTGGGCATGCCGGTGGCAGCGATGCGAAAGACCGCGCTAGAC ACCTTCGAGGAGGACGAGGTCTGCGACACGGTCAAGAACCTCAGAGAGAT CTGCGACGCTCTGAGGGCCGAGGGGAAGAAGGTCGGTGGATGGGTGGGTA GTGGGCGAATCTCTCCCGATTCGCCGTACCCACTGTGCACCCGGTGCGCG TCCTTGCTTGTCCCAACTCACAGAACGATGACTACGACTACGCTACGACT ACGACTACTAGAGCACTGCTTGCCCTCCGTACCTCCCTCCCTGTGCGCTT CGTTTTGGTTGCGACGCGCATCAACCCTCCTCAGCGAGAGCTACCCCCCC CCCCCCTGAACCCCCTTTTCCCGGCGATGCGACGGCATCATTCACTGCCT GCAGGTGATCGTCTGCAACGTGATGACCTCCGGCGCGGGCATCAACCGCC GCGCGGGCACCGCCAAGCGCCTCAACCGGCAGCTGGCGCTTTACACCAGG GCGACGGCAGCAGAGCCGGCGGCACCAGCGGCTCCAAGATCTGCCGAGAC CCCCCAAGCAGCCCAAGAAGGCCCCCGGGTGGAGCTCGTCAAGATGAACA ACCCGCGTGCGTCGAGGGACGACGGCCGCGCGTTTGACGGGCTGCACCTC AACGCTCGCGGGTACCGCGCGTTCGCAGGGGCCCTGTACGAGGCGCTGGG GCCCATGCTGGTCGCGGTGGAGTGGAAGGTCTGGAGGTCCAAGCTGGCGG AGGGGCTGGCGGAGGGGCTGGCTAGCGGGGCCCTTGGCGGTGCAGCCCCC ACAGCGCCAGCCTCCGACGAGAACGTCAAGCCGAAGAGCAAGAGGAACAA AAAGGCGGATTGATTAATTCTTGATGCTCTACGCCAAGAGTGGGTGGGGT TTGGAAAGCGGGAGAGCTTTGATCACGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1520:16913..21791-

>mRNA_L-elsbetiae_contig1520.3713.1 ID=mRNA_L-elsbetiae_contig1520.3713.1|Name=mRNA_L-elsbetiae_contig1520.3713.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2016bp|location=Sequence derived from alignment at L-elsbetiae_contig1520:16913..21791- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGATGCGAGAGTTCTGGCTGCTCACGACCTTCTTCCTTGTTGCCTT
GAGGCGGGCTCTGACCGTGGCTTGGATTCGTATCAACAAGTTCCTCACCA
ACCCGGACTGGCTGATCAGACCAGTCACATCGTTTCGGCACAAGATGGCG
ATGCGAGAGTTCTGGCTGCTCACGACCTTCTTCCTTGTTGCCTTGAGGCG
GGCTCTGACCGTGGCTTGGATTCGTATCAACAAGTTCCTCACCAACCCGG
ACTGGCTGATCAGACCAGTCACATCGTTTCGGCACAAGGTGGTGATTATC
GGAGATGGTTTCGCGGAAGGCCTCGGGGACTGGGTCGTCATGGGGGGGAT
GGCTGGTGTCACGCGGGTGCTCGAGAAACACGCCGGATCAGACGATAAGG
TGGTGATTATCGGAGATGGTTTCGCGGAAGGCCTCGGGGACTGGGTCGTC
ATGGGGGGGATGGCTGGTGTCACGCGGGTGCTCGAGAAACACGCCGGATC
AGACGATAAGGTGCGCACGAATTGGCAGATCATAAATCGGGGGCGAGCCG
GGAGCGTATCTGCCGACTGGCTGCCATCCGATGAAAAGGTGCGCACGAAT
TGGCAGATCATAAATCGGGGGCGAGCCGGGAGCGTATCTGCCGACTGGCT
GCCATCCGATGAAAAGTCGCTTTATCACAGGAAGGCGCGCGCCGCGGCCT
GCAAAGACGCGGAGATTTTTGTGGTGGCATTAGGGACGATGGACGTTGTC
GGAGAGTGCGTGGGCATGCCGGTGGCAGCGATGCGAAAGACCGCGCTAGA
CACCTTCGAGGAGGACGAGGTCTGCGACACGGTCAAGAACCTCAGAGAGA
TCTGCGACGCTCTGAGGGCCGAGGGGAAGAAGTCGCTTTATCACAGGAAG
GCGCGCGCCGCGGCCTGCAAAGACGCGGAGATTTTTGTGGTGGCATTAGG
GACGATGGACGTTGTCGGAGAGTGCGTGGGCATGCCGGTGGCAGCGATGC
GAAAGACCGCGCTAGACACCTTCGAGGAGGACGAGGTCTGCGACACGGTC
AAGAACCTCAGAGAGATCTGCGACGCTCTGAGGGCCGAGGGGAAGAAGGT
GATCGTCTGCAACGTGATGACCTCCGGCGCGGGCATCAACCGCCGCGCGG
GCACCGCCAAGCGCCTCAACCGGCAGCTGGCGCTTTACACCAGGGCGACG
GCAGCAGAGCCGGCGGCACCAGCGGCTCCAAGATCTGCCGAGACCCCCCA
AGCAGCCCAAGAAGGCCCCCGGGTGGAGCTCGTCAAGATGAACAACCCGC
GTGCGTCGAGGGACGACGGCCGCGCGTTTGACGGGCTGCACCTCAACGCT
CGCGGGTACCGCGCGTTCGCAGGGGCCCTGTACGAGGCGCTGGGGCCCAT
GCTGGTCGCGGTGGAGTGGAAGGTCTGGAGGTCCAAGCTGGCGGAGGGGC
TGGCGGAGGGGCTGGCTAGCGGGGCCCTTGGCGGTGCAGCCCCCACAGCG
CCAGCCTCCGACGAGAACGTCAAGCCGAAGAGCAAGAGGAACAAAAAGGC
GGATTGAGTGATCGTCTGCAACGTGATGACCTCCGGCGCGGGCATCAACC
GCCGCGCGGGCACCGCCAAGCGCCTCAACCGGCAGCTGGCGCTTTACACC
AGGGCGACGGCAGCAGAGCCGGCGGCACCAGCGGCTCCAAGATCTGCCGA
GACCCCCCAAGCAGCCCAAGAAGGCCCCCGGGTGGAGCTCGTCAAGATGA
ACAACCCGCGTGCGTCGAGGGACGACGGCCGCGCGTTTGACGGGCTGCAC
CTCAACGCTCGCGGGTACCGCGCGTTCGCAGGGGCCCTGTACGAGGCGCT
GGGGCCCATGCTGGTCGCGGTGGAGTGGAAGGTCTGGAGGTCCAAGCTGG
CGGAGGGGCTGGCGGAGGGGCTGGCTAGCGGGGCCCTTGGCGGTGCAGCC
CCCACAGCGCCAGCCTCCGACGAGAACGTCAAGCCGAAGAGCAAGAGGAA
CAAAAAGGCGGATTGA
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