mRNA_L-elsbetiae_contig1520.3713.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1520.3713.1 vs. uniprot
Match: D8LEZ0_ECTSI (SGNH_hydro domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEZ0_ECTSI) HSP 1 Score: 486 bits (1252), Expect = 1.330e-170 Identity = 249/335 (74.33%), Postives = 278/335 (82.99%), Query Frame = 1 Query: 1 MAMREFWLLTTFFLVALRRALTVAWIRINKFLTNPDWLIRPVTSFRHKVVIIGDGFAEGLGDWVVMGGMAGVTRVLEKHAGSDDKVRTNWQIINRGRAGSVSADWLPSDEKSLYHRKARAAACKDAEIFVVALGTMDVVGECVGMPVAAMRKTALDTFEEDEVCDTVKNLREICDALRAEGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYTRATAAEPXXXXXXXSAETPQAAQEGPRVELVKMNNPRASRDDGRAFDGLHLNARGYRAFAGALYEALGPMLVAVEWKVWRSKLAEGLXXXXXXXXXXXAAPTAPASDENVKPKSKRNKKAD 1005 MA REFWLLT++ LVALRRALTV WIRINKFL PDW+IRPV FRHKVV+IGDGFAEG+GDWVVMGG AGVTR+LEK AGSD+KVRT W IINRGRAGS+S+DWLPSD KSLYHRK ++ AC+DAEIFVVALGTMDVV +CVGMPV+AMRKTALDTFEE E+CDTVKNLREICDALRAEGKKV+VCNVMTSGAGINRR GTAKR+NRQLALY +ATA +A+ A + G VE+VKMNNPRA+R+DGRAFDGLHLNARGYRAFA A+YE +GPM+VAVEWKVW+SKLA GL A AP S E +PKSK NKKAD Sbjct: 1 MATREFWLLTSYLLVALRRALTVTWIRINKFLMKPDWVIRPVADFRHKVVLIGDGFAEGVGDWVVMGGTAGVTRMLEKEAGSDEKVRTCWHIINRGRAGSLSSDWLPSDPKSLYHRKVQSEACRDAEIFVVALGTMDVVNDCVGMPVSAMRKTALDTFEEGEICDTVKNLREICDALRAEGKKVVVCNVMTSGAGINRRTGTAKRINRQLALYGKATATA--------TAKGETAPKGGQPVEVVKMNNPRAAREDGRAFDGLHLNARGYRAFASAVYEVVGPMMVAVEWKVWKSKLAAGLTNGAG------GAAVAPISGEGFEPKSKSNKKAD 321
BLAST of mRNA_L-elsbetiae_contig1520.3713.1 vs. uniprot
Match: A0A024U869_9STRA (SGNH_hydro domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U869_9STRA) HSP 1 Score: 141 bits (356), Expect = 3.300e-36 Identity = 91/284 (32.04%), Postives = 141/284 (49.65%), Query Frame = 1 Query: 43 VALRRALTVAWIRINKFLTNPDWLIRPVTSFRHKVVIIGDGFAEGLGDWVVMGGMAGVTRVLEKHAGSDDKVRTNWQIINRGRAGSVSADWLPSDEKSLYHRKARAAACKDAEIFVVALGTMDVVGECVGMPVAAMRKTALDTFEEDEVCDTVKNLREICDALRAEGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYTRATAAEPXXXXXXXSAETPQAAQEGPRVELVK-MNNPRASRDDGRAFDGLHLNARGYRAFAGALYEALGPMLVAVEWKVWRSKL 891 VA+R A W+R ++LT P L+ ++HK+VIIGDGFA G GDW+ M G+++ L + +DK+R WQ+INRG + S+ W P+ + +DA+I +V +G++D + RK + E+ TV N++ ICDALR +GK+V V ++ A + T + N+ L Y +T + + P V+L ++ P R D +AFDG H NA+ Y+ A L P+L AVEW W+ +L Sbjct: 10 VAVRTAAAWLWLRFCRWLTQPLRLVLKANEYQHKIVIIGDGFAAGFGDWITMATSGGLSQYLAQEVAKEDKIRHRWQVINRGILDTDSSQWHPTSSTKYFQDVFSVPQLRDADIVMVIVGSID-----------SRRKNPSISPEQ-----TVCNIQAICDALRKKGKRVCVGSLCH--ADFDTENETHRVTNQALVDYCESTKMD----------DLP--------VKLTPDLSTPVVRRSDSKAFDGYHFNAKAYQQIARDSMAVLTPLLTAVEWATWKKQL 257
BLAST of mRNA_L-elsbetiae_contig1520.3713.1 vs. uniprot
Match: W4FUK0_9STRA (SGNH_hydro domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FUK0_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.610e-35 Identity = 85/283 (30.04%), Postives = 135/283 (47.70%), Query Frame = 1 Query: 43 VALRRALTVAWIRINKFLTNPDWLIRPVTSFRHKVVIIGDGFAEGLGDWVVMGGMAGVTRVLEKHAGSDDKVRTNWQIINRGRAGSVSADWLPSDEKSLYHRKARAAACKDAEIFVVALGTMDVVGECVGMPVAAMRKTALDTFEEDEVCDTVKNLREICDALRAEGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYTRATAAEPXXXXXXXSAETPQAAQEGPRVELVKMNNPRASRDDGRAFDGLHLNARGYRAFAGALYEALGPMLVAVEWKVWRSKL 891 VA+R + W+R ++ P L+ + HK+VIIGDGFA G GDW+ M G++ + +DK+R WQ+INRG + S+ W P+ + +DA++ +V +G+MD A RKT + D+ T++N++ ICDALR +GK+V V ++ S + + +N+ L + +TA + P ++ P R D +AFDG H NA+ Y+ A L P+L AVEW W+ +L Sbjct: 6 VAVRTFIAWLWLRFCRWCAQPLRLVLKSNEYYHKIVIIGDGFAAGFGDWITMASSGGLSEYIAHEISKEDKIRHKWQVINRGIVDTDSSQWHPTSSTKYFQSVMSTPQLRDADVVLVVVGSMD-----------ARRKTP--SISPDQ---TLRNIQAICDALRKKGKRVCVGSLCHSD--VVTECDGHRSINQALVDFCASTATDAF-----------------PVKITPDLSTPVVRRSDAKAFDGFHFNAKAYQQIARDSMMVLTPLLTAVEWSTWKKQL 253
BLAST of mRNA_L-elsbetiae_contig1520.3713.1 vs. uniprot
Match: A0A6G0XR96_9STRA (SGNH_hydro domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR96_9STRA) HSP 1 Score: 137 bits (345), Expect = 1.340e-34 Identity = 91/284 (32.04%), Postives = 130/284 (45.77%), Query Frame = 1 Query: 43 VALRRALTVAWIRINKFLTNPDWLIRPVTSFRHKVVIIGDGFAEGLGDWVVMGGMAGVTRVLEKH-AGSDDKVRTNWQIINRGRAGSVSADWLPSDEKSLYHRKARAAACKDAEIFVVALGTMDVVGECVGMPVAAMRKTALDTFEEDEVCDTVKNLREICDALRAEGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYTRATAAEPXXXXXXXSAETPQAAQEGPRVELVKMNNPRASRDDGRAFDGLHLNARGYRAFAGALYEALGPMLVAVEWKVWRSKL 891 VA+R W+R+ ++ P LI P FRHK+VIIGDGFA G GDWV M G+ R + A + KVR WQ+INRG + S+ W P+ + +DA+I +V +G+MD + R + + TV N++ ICDALR +GK+V + + S A N+QL Y T+ + P ++ P R D +AFDG H N++ Y+ A L PML AVEW W+ +L Sbjct: 10 VAIRTFFAWIWLRLCRWCAQPLRLILPSNEFRHKIVIIGDGFAAGFGDWVTMDSPGGLARYIANEIAQEESKVRHKWQVINRGILDTDSSQWHPTASTKYFQDTFSKHQLRDADIVLVIVGSMD-----------SKRSPPIPPSQ------TVTNIQSICDALRKKGKRVCIGTLCHSDVEAQNEIHRAT--NKQLLEYCNETSGDDL-----------------PVKMTPDLSLPIVRRPDAKAFDGFHFNSKAYQQIAHEAMTVLTPMLTAVEWITWKKQL 257
BLAST of mRNA_L-elsbetiae_contig1520.3713.1 vs. uniprot
Match: A0A485L2D1_9STRA (Aste57867_14724 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2D1_9STRA) HSP 1 Score: 136 bits (343), Expect = 2.620e-34 Identity = 86/286 (30.07%), Postives = 129/286 (45.10%), Query Frame = 1 Query: 43 VALRRALTVAWIRINKFLTNPDWLIRPVTSFRHKVVIIGDGFAEGLGDWVVMGGMAGVTRVLEKHAGSDDKVRTNWQIINRGRAGSVSADWLPSDEKSLYHRKARAAACKDAEIFVVALGTMDVVGECVGMPVAAMRKTALDTFEEDEVCDTVKNLREICDALRAEGKKVIV---CNVMTSGAGINRRAGTAKRLNRQLALYTRATAAEPXXXXXXXSAETPQAAQEGPRVELVKMNNPRASRDDGRAFDGLHLNARGYRAFAGALYEALGPMLVAVEWKVWRSKL 891 V +R W+R +++ P L+ F HK+VIIGDGFA G GDWV M G+ + + K ++ K+R W++INRG S SADW P+ + + +DAE+ +V +G++D+ + +T+KN++ ICDAL +GK+V V C++ A RL + L T +A E P ++ P R D +AFDG H N++ Y+ A L P L AVEW W+ KL Sbjct: 11 VTVRTFFAWLWLRYCRWVAQPIRLVPRSNEFVHKIVIIGDGFAAGFGDWVTMDSAGGLAQYIAKEIVNEPKIRHKWKVINRGILNSDSADWHPTSQTKYFQDVFSTRQLRDAEVVLVIVGSIDI-----------------RRYPRIPAAETLKNIQSICDALTKKGKRVCVGSLCHIDIEAQN------EAHRLENKAIL----------------DLCTDTSADELPIKMAPDLSTPIVRRADSKAFDGFHFNSKAYQQIARDTMTVLTPTLTAVEWTTWKKKL 257
BLAST of mRNA_L-elsbetiae_contig1520.3713.1 vs. uniprot
Match: T0QG23_SAPDV (SGNH_hydro domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QG23_SAPDV) HSP 1 Score: 132 bits (332), Expect = 1.030e-32 Identity = 83/274 (30.29%), Postives = 130/274 (47.45%), Query Frame = 1 Query: 73 WIRINKFLTNPDWLIRPVTSFRHKVVIIGDGFAEGLGDWVVMGGMAGVTRVLEKHAGSDDKVRTNWQIINRGRAGSVSADWLPSDEKSLYHRKARAAACKDAEIFVVALGTMDVVGECVGMPVAAMRKTALDTFEEDEVCDTVKNLREICDALRAEGKKVIVCNVMTSGA-GINRRAGTAKRLNRQLALYTRATAAEPXXXXXXXSAETPQAAQEGPRVELVKMNNPRASRDDGRAFDGLHLNARGYRAFAGALYEALGPMLVAVEWKVWRSKL 891 W+R+ +++ P I P + +RHK+VIIGDGFA G GD++ G+ + L + K+R NWQ+INRG + S+ W P + + +DA+I +V +G+MD A R + E EV T++N++ ICDAL +GK+V V + S IN + +L R + T+ E P + + P R + +AFDG+H N+ GY+ A + + P+ AVEW W+ KL Sbjct: 20 WLRLCRWIQQPPRAILPTSEYRHKIVIIGDGFAAGYGDYINFDSPGGLAKYLHAAMAQEAKIRHNWQVINRGIVDTDSSQWTPMADTKYFQTVFSKKEYRDADIVLVVVGSMD-----------AQRSPPI----EPEV--TLRNIKSICDALTKKGKRVAVGTLCHSDIKAINVKHTATNKLLRDFCVDTQ--------------------HDELPVMCAPDLAIPMVRRPEAKAFDGIHFNSSGYKQIAKDAMDVIQPLATAVEWTTWKKKL 256
BLAST of mRNA_L-elsbetiae_contig1520.3713.1 vs. uniprot
Match: A0A0W8C468_PHYNI (SGNH_hydro domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C468_PHYNI) HSP 1 Score: 132 bits (332), Expect = 1.050e-32 Identity = 94/293 (32.08%), Postives = 140/293 (47.78%), Query Frame = 1 Query: 40 LVALRRALTVAWIRINKFLTNPDWL--IRPVTSFRHKVVIIGDGFAEGLGDWVVMGGMAG-VTRVLEKHAGSDDK----VRTNWQIINRGRAGSVSADWLPSDEKSLYHRKARAAACKDAEIFVVALGTMDVVGECVGMPVAAMRKTALDTFEEDEVCDTVKNLREICDALRAEGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYTRATAAEPXXXXXXXSAETPQAAQEGPRVELVKMNNPRASRDDGRAFDGLHLNARGYRAFAGALYEALGPMLVAVEWKVWRSKLAE 897 LVALR L + W I FL + ++P + F HKVVIIGD FA G+GD++ +GG G + + L+K DDK VR NW IIN G GS +ADWL S K + ++ DA I ++ LG+ ++ E E+ +NL EICD LR +GK+V + V++ + + LN L + ++T+ E E P GPR++ R+ +D H N++ YR A + L PM+ AVEW W+ +L++ Sbjct: 2 LVALRAFLALVWWHICHFLAYNLHVRGLKPSSQFFHKVVIIGDDFAAGIGDYITIGGAGGGIAQYLKKIVAYDDKASGAVRHNWAIINAGVPGSTTADWLMSSPKKYFKNVFTSSVMSDASIVIIILGSTEIRNSGTA---------------EHEI---KRNLMEICDTLRKKGKQVCLATVVSPEPTASEMDSASSTLNTALEQFCKSTSTE----------EAPVIL--GPRLDTYAFR-----RESALCYDKYHFNSQSYRQLARNTADFLIPMMTAVEWTTWKEQLSQ 259
BLAST of mRNA_L-elsbetiae_contig1520.3713.1 vs. uniprot
Match: A0A329T1V1_9STRA (SGNH_hydro domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T1V1_9STRA) HSP 1 Score: 130 bits (326), Expect = 7.100e-32 Identity = 92/289 (31.83%), Postives = 136/289 (47.06%), Query Frame = 1 Query: 40 LVALRRALTVAWIRINKFLTNPDWL--IRPVTSFRHKVVIIGDGFAEGLGDWVVMGGMAG-VTRVLEKHAGSDDKVRTNWQIINRGRAGSVSADWLPSDEKSLYHRKARAAACKDAEIFVVALGTMDVVGECVGMPVAAMRKTALDTFEEDEVCDTVKNLREICDALRAEGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYTRATAAEPXXXXXXXSAETPQAAQEGPRVELVKMNNPRASRDDGRAFDGLHLNARGYRAFAGALYEALGPMLVAVEWKVWRSKLAE 897 L LR L + W I FL + + P + F HKVVIIGD FA G+GD++ +G G + L+K DDKVR NW IIN G GS +ADWL S K + + A D I ++ LG+ A +R ++ D E +L EICD LR +GK+V + V + + + LN L + ++T+ E E P GPR++ R+ ++D H N++ YR A + L PM+ AVEW W+++L++ Sbjct: 2 LATLRAFLALLWWYICHFLAYNLHVRGLNPASQFFHKVVIIGDDFAAGIGDYISVGSAGGGIAEYLKKIVAFDDKVRHNWAIINAGVPGSTTADWLMSSPKKYFKNVFTSRAMSDVSIVIIILGS------------AEIRNSSSDGHEMKH------HLMEICDTLRKKGKQVCLATVASPDPTASETDSASSTLNTALEQFCKSTSTE----------EAPVIL--GPRLDTYAFR-----RESALSYDKYHFNSQSYRQLACNTADFLIPMMTAVEWTTWKAQLSQ 255
BLAST of mRNA_L-elsbetiae_contig1520.3713.1 vs. uniprot
Match: A0A6A3RM93_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RM93_9STRA) HSP 1 Score: 127 bits (319), Expect = 7.370e-31 Identity = 93/288 (32.29%), Postives = 136/288 (47.22%), Query Frame = 1 Query: 40 LVALRRALTVAWIRINKFLTNPDWL--IRPVTSFRHKVVIIGDGFAEGLGDWVVMGGMAG-VTRVLEKHAGSDDKVRTNWQIINRGRAGSVSADWLPSDEKSLYHRKARAAACKDAEIFVVALGTMDVVGECVGMPVAAMRKTALDTFEEDEVCDTVKNLREICDALRAEGKKVIVCNVMTSGAGINRRAGTAKRLNRQLALYTRATAAEPXXXXXXXSAETPQAAQEGPRVELVKMNNPRASRDDGRAFDGLHLNARGYRAFAGALYEALGPMLVAVEWKVWRSKLA 894 L ALR L + W I FL + + ++P + F HKVVIIGD FA G+GD+V +G G + L+K DDKVR NW IIN G GS +ADWL S K ++ + A DA I ++ LG++++ P AA + +NL EICD LR +GK+V + V + + LN L + ++T+ E + P GPR++ R+ D N++ YR A + L PM+ AVEW W+ +L+ Sbjct: 2 LEALRVFLALVWWHICHFLAHNLHVRGLKPASQFFHKVVIIGDDFAAGVGDYVTVGSAGGGIAPYLKKIVSHDDKVRHNWAIINAGVPGSTTADWLLSSPKKYFNNVFTSRAMADASIVIIILGSVEIRN-----PAAAGHEMR-------------RNLVEICDTLRKKGKQVCLATVASPDPTATETDSASSTLNTALEHFCKSTSTE----------DAPVIL--GPRLDTYAFR-----RESALWIDKYRFNSQSYRQLARNTADFLIPMMTAVEWTTWKEQLS 254
BLAST of mRNA_L-elsbetiae_contig1520.3713.1 vs. uniprot
Match: A0A1V9ZUG2_9STRA (SGNH_hydro domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZUG2_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.110e-30 Identity = 87/284 (30.63%), Postives = 129/284 (45.42%), Query Frame = 1 Query: 43 VALRRALTVAWIRINKFLTNPDWLIRPVTSFRHKVVIIGDGFAEGLGDWVVMGGMAGVTRVLEKHAGSDDKVRTNWQIINRGRAGSVSADWLPSDEKSLYHRKARAAACKDAEIFVVALGTMDVVGECVGMPVAAMRKTALDTFEEDEVCDTVKNLREICDALRAEGKKVIVCNVMTSG-AGINRRAGTAKRLNRQLALYTRATAAEPXXXXXXXSAETPQAAQEGPRVELVKMNNPRASRDDGRAFDGLHLNARGYRAFAGALYEALGPMLVAVEWKVWRSKL 891 V +R L W+R+ +++ P I P + +RHK+VIIGDGFA G GD++ G+ + L D K+R NWQ++N G + S+ W P +H A KDA+I +V +G+MD A R + E T++NL+ I DAL +GK+V + + A N A +L R T+ + P GP + L + P A +AFDG H N+ Y+ A + + PM AVEW W+ KL Sbjct: 10 VTVRSYLAWFWLRLCRWVQQPARAILPTSEYRHKIVIIGDGFAAGYGDYITFDSPGGLAKYLRAAMSQDAKIRHNWQVLNCGIVDTDSSQWTPMASTKYFHDIFSKAEYKDADIVLVMVGSMD-----------ATRTPPIAPEE------TLRNLKSIADALTKKGKRVALAPLCHCDLAAQNDVHVAASKLIRDFCTDTQ-------------HDDLPVVC--GPNLALPMVRRPEA-----KAFDGFHFNSSAYKQIAQDAMDVVQPMATAVEWTTWKKKL 256 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1520.3713.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1520.3713.1 >prot_L-elsbetiae_contig1520.3713.1 ID=prot_L-elsbetiae_contig1520.3713.1|Name=mRNA_L-elsbetiae_contig1520.3713.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=336bp MAMREFWLLTTFFLVALRRALTVAWIRINKFLTNPDWLIRPVTSFRHKVVback to top mRNA from alignment at L-elsbetiae_contig1520:16913..21791- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1520.3713.1 ID=mRNA_L-elsbetiae_contig1520.3713.1|Name=mRNA_L-elsbetiae_contig1520.3713.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4879bp|location=Sequence derived from alignment at L-elsbetiae_contig1520:16913..21791- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1520:16913..21791- >mRNA_L-elsbetiae_contig1520.3713.1 ID=mRNA_L-elsbetiae_contig1520.3713.1|Name=mRNA_L-elsbetiae_contig1520.3713.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2016bp|location=Sequence derived from alignment at L-elsbetiae_contig1520:16913..21791- (Laminarionema elsbetiae ELsaHSoW15)back to top |