mRNA_L-elsbetiae_contig15143.3681.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15143.3681.1 vs. uniprot
Match: A0A6H5JKV6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKV6_9PHAE) HSP 1 Score: 293 bits (749), Expect = 1.390e-92 Identity = 154/257 (59.92%), Postives = 191/257 (74.32%), Query Frame = 1 Query: 1 QVTPQDGFTIYWAVAAADQEITVQAVYEGQGYVSVGFSSTGAMVPGDAVIGLPDDAAAVEYDLADYTLPNVTPNGNPEISGATVTQGASATTLSFTRPLAPADAGKTTLSSEEGETVTFLWAFGNSNDLAYHGFAQKGSVTLSDLACSAELEE-DDXXXXDGA------EAAGEDCTSSDPDYQFEVAPSGDADELMLFWSVVGSSVSVKAVYAGDGWLGIGWSSNGRMPGSDSVIGLPDDATALEYDMDSYSTPVE 750 QV +DGFT+YW V A +E+T+Q VY+G+G+V +GFSSTGAMVP DAV+GLPD+ A+EYDL+ Y L + + EISGA+VTQ S TTL FTRPL+PAD KT LS+EEGE TF+WA+G+SN YH +G T+SDL CS +EE DD D A EAA E+C SSDPD+++EVAP ++L LFWSVVG+SVSVKAVY G+G+L IG+S +G MPGSD+VIGLPD+ATALEYDMDSY TP E Sbjct: 38 QVIAEDGFTVYWTVDTAAEEVTMQVVYDGEGFVGLGFSSTGAMVPADAVVGLPDEGTALEYDLSTYALSSDNEHETQEISGASVTQADSTTTLVFTRPLSPADDSKTVLSAEEGEKATFIWAYGSSNTFQYH--EARGDFTVSDLLCSEVVEEEDDDSEGDXAADAADAEAAAENCASSDPDFEYEVAPH---EDLALFWSVVGTSVSVKAVYQGEGYLSIGFSDSGSMPGSDAVIGLPDEATALEYDMDSYGTPEE 289
BLAST of mRNA_L-elsbetiae_contig15143.3681.1 vs. uniprot
Match: D7FJ76_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ76_ECTSI) HSP 1 Score: 130 bits (327), Expect = 4.600e-32 Identity = 77/167 (46.11%), Postives = 101/167 (60.48%), Query Frame = 1 Query: 1 QVTPQDGFTIYWAVAAADQEITVQAVYEGQGYVSVGFSSTGAMVPGDAVIGLPDDAAAVEYDLADYTLPNVTPNGNPEISGATVTQGASATTLSFTRPLAPADAGKTTLSSEEGETVTFLWAFGNSNDLAYHGFA-QKGSVTLSDLACSAELEEDDXXXXDGAEAAG 498 QVTP DGF ++W+V + I+V+ V + S+GFSS M+ DAVIGLPD++A EYDL T V P+ +I+G +V+Q AS TTLSFTRPLAPA+ K +S G+ FL+AFG N+L +HG A +GS+ L DL C D DGA AG Sbjct: 40 QVTPTDGFDVHWSVDTVAETISVEVVSTAVAWTSLGFSSDLMMIGSDAVIGLPDESAVEEYDLISQTTAGVLPSATQDITGGSVSQDASGTTLSFTRPLAPAN--KQAISGTPGDETIFLYAFGGDNELGFHGLAPNRGSLVL-DLFCG------DGGDGDGATVAG 197
BLAST of mRNA_L-elsbetiae_contig15143.3681.1 vs. uniprot
Match: A0A6H5JN46_9PHAE (DOMON domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN46_9PHAE) HSP 1 Score: 124 bits (310), Expect = 1.020e-29 Identity = 68/148 (45.95%), Postives = 96/148 (64.86%), Query Frame = 1 Query: 1 QVTPQDGFTIYWAVAAADQEITVQAVYEGQGYVSVGFSSTGAMVPGDAVIGLPDDAAAVEYDLADYTLPNVTPNGNPEISGATVTQGASATTLSFTRPLAPADAGKTTLSSEEGETVTFLWAFGNSNDLAYHGFA-QKGSVTLSDLAC 441 QVTP DGF ++W+V + I+++ V + S+GFSS +MV DAVIGLP+++ EYDL + L V + +I+G +V+Q AS TTLSFTRPLAPA+ K +S G+ F++AFG N+LA+HG A +G +TL DL C Sbjct: 40 QVTPTDGFEVHWSVDTVAETISIEVVSTAVAWTSLGFSSDLSMVGSDAVIGLPEESTVEEYDLTSHALAGVVLSSTQDITGGSVSQDASGTTLSFTRPLAPAN--KQAISGTPGDETIFIYAFGEGNELAFHGQAPNRGDLTL-DLFC 184
BLAST of mRNA_L-elsbetiae_contig15143.3681.1 vs. uniprot
Match: A0A6H5K4J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4J1_9PHAE) HSP 1 Score: 116 bits (291), Expect = 1.920e-26 Identity = 66/148 (44.59%), Postives = 90/148 (60.81%), Query Frame = 1 Query: 1 QVTPQDGFTIYWAVAAADQEITVQAVYEGQGYVSVGFSSTGAMVPGDAVIGLPDDAAAVEYDLADYTLPNVTPNGNPEISGATVTQGASATTLSFTRPLAPADAGKTTLSSEEGETVTFLWAFGNSNDLAYHGFAQKGSVTLSDLACS 444 QVTP+DGFT+ W V QEITV+AVY+G G++++G+S +G M DAVIGLP +EYD+ DY+ P+ + EIS AT+TQ TTL F RPL P+ GK LS + +L+A+G SN+ H G L+ +CS Sbjct: 131 QVTPEDGFTLSWTVDTDTQEITVEAVYQGSGWLAIGWSDSGRMPGSDAVIGLPSAETVLEYDMPDYSTPSA--SAVQEISDATITQAGGVTTLKFVRPLEPSGDGKQLLSVSD--PAIWLYAWGGSNNFVLHSVV--GGFYLALDSCS 272
BLAST of mRNA_L-elsbetiae_contig15143.3681.1 vs. uniprot
Match: D7FYB8_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYB8_ECTSI) HSP 1 Score: 87.8 bits (216), Expect = 5.830e-17 Identity = 51/106 (48.11%), Postives = 65/106 (61.32%), Query Frame = 1 Query: 127 MVPGDAVIGLPDDAAAVEYDLADYTLPNVTPNGNPEISGATVTQGASATTLSFTRPLAPADAGKTTLSSEEGETVTFLWAFGNSNDLAYHGFA-QKGSVTLSDLAC 441 M+ DAVIGLPD++ EYDL T V + +I+G V+Q AS TTLSFTRPLAP + K +S G+ FL+AFG N+L YHG +GS+ L DL C Sbjct: 1 MIGSDAVIGLPDESTVEEYDLTSQTTARVFSSATQDITGGLVSQDASGTTLSFTRPLAPTN--KQAISGTPGDETIFLFAFGADNELGYHGLPPNRGSLVL-DLFC 103
BLAST of mRNA_L-elsbetiae_contig15143.3681.1 vs. uniprot
Match: A0A7S0E0V6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E0V6_9EUKA) HSP 1 Score: 57.4 bits (137), Expect = 1.130e-6 Identity = 35/80 (43.75%), Postives = 46/80 (57.50%), Query Frame = 1 Query: 505 CT-SSDPDYQFEVAPSGDADELMLFWSVVGSSVSVKA-VYAGDGWLGIGWSSNGRMPGSDSVIGLPDDATALEYDMDSYS 738 CT SS P Y V P G L W+V G+ VS+ A A DG++ +GWSS+G M GSD+VIG A A Y ++ Y+ Sbjct: 53 CTASSRPGYDCMVEPPGGMQGYALHWTVAGADVSILAETTAMDGYIAVGWSSDGMMGGSDAVIGWAGHAAA--YRLEGYA 130 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15143.3681.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15143.3681.1 >prot_L-elsbetiae_contig15143.3681.1 ID=prot_L-elsbetiae_contig15143.3681.1|Name=mRNA_L-elsbetiae_contig15143.3681.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=250bp QVTPQDGFTIYWAVAAADQEITVQAVYEGQGYVSVGFSSTGAMVPGDAVIback to top mRNA from alignment at L-elsbetiae_contig15143:807..4124+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15143.3681.1 ID=mRNA_L-elsbetiae_contig15143.3681.1|Name=mRNA_L-elsbetiae_contig15143.3681.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3318bp|location=Sequence derived from alignment at L-elsbetiae_contig15143:807..4124+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15143:807..4124+ >mRNA_L-elsbetiae_contig15143.3681.1 ID=mRNA_L-elsbetiae_contig15143.3681.1|Name=mRNA_L-elsbetiae_contig15143.3681.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1500bp|location=Sequence derived from alignment at L-elsbetiae_contig15143:807..4124+ (Laminarionema elsbetiae ELsaHSoW15)back to top |