mRNA_L-elsbetiae_contig15132.3674.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15132.3674.1 vs. uniprot
Match: D7FY72_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY72_ECTSI) HSP 1 Score: 295 bits (754), Expect = 3.970e-88 Identity = 223/470 (47.45%), Postives = 246/470 (52.34%), Query Frame = 1 Query: 1 GRACLSPTNSSVPVLYVFGRGSLDVDDLASALLSGPLSVVPPGAASAGDGESPSSPLAPKVGAGPGVSGNPP---------------VLLLYDVTYAHAIPALLERL--SGVAREGKRLVVGFPTPEAYSPL--------------GAGSAXXXXXXXXXXXXXXXXXVTSASSQEPKQE---QQLLASGGAEAA-RTCCRGSSKPGAQGTGG---------------------------GGCSEDGKARC----GGGDTSGQ-TPKTSQEETETAXXXADGEKVSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVRIGGLGVELESEEELQRHVLVFVGGEGRQLSNVLMRCAGCVDRVRYDPALPPGQRVVGDTRKGNKDLMRRYYLVQRAREAGVIGIVVGTLGVQRYGSVVRSLREMIDGAGRKAYTLAVGKVNVAKLANFAEV 1209 GRACLSPTNSSVPVLYVFGRG LDV LAS LLSGPLS A+A G S VLLLYDVTYA+AIPALLERL +G ++ G RLVVGFPT EAYSP+ GA S + S+ ++E + SGG A T RG+ P +G G G S A GG GQ TP T + +T T A RVRIGGLGV+LESEEEL+RH LVFVGGEGRQLSNVLMRCAGCVDR+RYDP LPPG+RV+GDTRKGNKDLMRRYYLVQRAREAGVIGIVVGTLGVQRYGSVVRS+R+MI+ AGRKAYTLAVGKVNVAKLANFAEV Sbjct: 158 GRACLSPTNSSVPVLYVFGRGDLDVQHLASTLLSGPLSAT----AAATPGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLLYDVTYAYAIPALLERLDAAGGSKRG-RLVVGFPTSEAYSPMTGGCAKPAAAGYGCGATSTKGEGGGSDGCGRSDRGPPCTGDSRSAEKETTGECCRRSGGENAGCGTGGRGTGHPSREGALGXXXXXXXXXXXXXXXXXXXXXXXXXPAGAVSSPPSAXXSTTSGGLGNPGQGTPSTPETDTRTPGQSAGA-----------------------------APGEGGAALSTAGTPAPLSSCQRKRRVRIGGLGVDLESEEELRRHKLVFVGGEGRQLSNVLMRCAGCVDRMRYDPCLPPGERVIGDTRKGNKDLMRRYYLVQRAREAGVIGIVVGTLGVQRYGSVVRSVRKMIEDAGRKAYTLAVGKVNVAKLANFAEV 593
BLAST of mRNA_L-elsbetiae_contig15132.3674.1 vs. uniprot
Match: A0A7S3XP23_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP23_HETAK) HSP 1 Score: 137 bits (346), Expect = 4.150e-32 Identity = 73/131 (55.73%), Postives = 92/131 (70.23%), Query Frame = 1 Query: 817 IGGLGVELESEEELQRHVLVFVGGEGRQLSNVLMRCAGCVDRVRYDPALPPGQRVVGDTRKGNKDLMRRYYLVQRAREAGVIGIVVGTLGVQRYGSVVRSLREMIDGAGRKAYTLAVGKVNVAKLANFAEV 1209 + GL + EE+L+ +V++G EG QLS +LMRC+ YDP P Q +T K N+ LMRR+YLVQRAREA ++G+VVGTLGV Y S VR LR +++ AGRKAYT AVGK+NVAKLANFAEV Sbjct: 292 LAGLEIPKIDEEQLEASTIVYLGSEGPQLSTLLMRCSKS-KCFSYDPQRDPNQEFREETGKSNRALMRRFYLVQRAREASIVGLVVGTLGVAGYLSQVRRLRALVEAAGRKAYTFAVGKLNVAKLANFAEV 421
BLAST of mRNA_L-elsbetiae_contig15132.3674.1 vs. uniprot
Match: A0A836CDL8_9STRA (Putative diphthamide biosynthesis protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDL8_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.090e-27 Identity = 70/141 (49.65%), Postives = 91/141 (64.54%), Query Frame = 1 Query: 811 VRIGGLGVELESEEELQRHVLVFVGGEGRQLSNVLMRCAGCVDRVRYDPALPPGQ--------RVVGDTRKGNKDLMRRYYLVQRAREAGVIGIVVGTLGVQRYGSVVRSLREMIDGAGRKAYTLAVGKVNVAKLANFAEV 1209 V I GL V+ +E LQ+ ++++GGEGR+LSNVLMRCAG + R YDP P G R+ + N+DLMRRY+ +QRA+EA VIGIV +GV ++ SLR ++ AGRKAY AVG+VN AKL NFA V Sbjct: 151 VVIVGLTVQGITEAMLQQCSVLYIGGEGRRLSNVLMRCAGYIGRWSYDPRQPGGSLDGKQRTGRLREEVAGANRDLMRRYHQIQRAKEASVIGIVGAGMGVAGSSDIMCSLRAAVEDAGRKAYAFAVGRVNAAKLGNFAGV 291
BLAST of mRNA_L-elsbetiae_contig15132.3674.1 vs. uniprot
Match: K8YSW8_NANGC (Diphthamide biosynthesis (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YSW8_NANGC) HSP 1 Score: 109 bits (273), Expect = 2.440e-24 Identity = 62/119 (52.10%), Postives = 84/119 (70.59%), Query Frame = 1 Query: 868 VLVFVGGE--GRQLSNVLMRCAGCVDRVRYDPALPP---GQRVVGDTRKGNKDLMRRYYLVQRAREAGVIGIVVGTLGVQRYGSVVRSLREMIDGAGRKAYTLAVGKVNVAKLANFAEV 1209 V++++G +QL N+++R C D + YDPA PP R+ + K ++ L RRYYLVQRAR+A V G+VVGTLGV RY SVV ++R +I AG+KAYTL +GK+N AKLANFAE+ Sbjct: 3 VVIYIGESENNKQLVNIMLRFNAC-DCLVYDPASPPLPAPPRLREVSVKTSQALKRRYYLVQRARDASVFGVVVGTLGVGRYMSVVAAVRRLIARAGKKAYTLLIGKLNAAKLANFAEI 120
BLAST of mRNA_L-elsbetiae_contig15132.3674.1 vs. uniprot
Match: W7TR02_9STRA (Diphthamide biosynthesis n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TR02_9STRA) HSP 1 Score: 111 bits (277), Expect = 5.830e-23 Identity = 68/140 (48.57%), Postives = 93/140 (66.43%), Query Frame = 1 Query: 820 GGLGVELES-----EEELQRHVLVFVGGE--GRQLSNVLMRCAGCVDRVRYDPALPP---GQRVVGDTRKGNKDLMRRYYLVQRAREAGVIGIVVGTLGVQRYGSVVRSLREMIDGAGRKAYTLAVGKVNVAKLANFAEV 1209 GGL + +E+ E E V++++G +QL N+++R C D + YDPA PP R+ + K ++ L RRYYLVQRAR+A V G+VVGTLGV RY SVV ++R +I AG+KAYTL +GK+N AKLANFAE+ Sbjct: 227 GGLELRVENNGEEGEGEGGDAVVIYIGESENNKQLVNIMLRFNAC-DCLVYDPASPPLPAPPRLREVSVKTSQALKRRYYLVQRARDASVFGVVVGTLGVGRYMSVVAAVRRLIARAGKKAYTLLIGKLNAAKLANFAEI 365
BLAST of mRNA_L-elsbetiae_contig15132.3674.1 vs. uniprot
Match: A0A6A1W6Z0_9ROSI (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1W6Z0_9ROSI) HSP 1 Score: 109 bits (273), Expect = 1.650e-22 Identity = 59/131 (45.04%), Postives = 86/131 (65.65%), Query Frame = 1 Query: 814 RIGGLGVELESEEELQRHVLVFVGGEGRQLSNVLMRCAGCVDRVRYDPALPPGQRVVGDTRKGNKDLMRRYYLVQRAREAGVIGIVVGTLGVQRYGSVVRSLREMIDGAGRKAYTLAVGKVNVAKLANFAE 1206 R+GGL L ++ ++L ++G + +NV+M GC D VRYD A +V D + + L RRYYLV++A++A ++GI+VGTLGV Y ++R ++E+I GAG+KAYTL VG+ N AKLANF E Sbjct: 215 RMGGLCWTLPDGHRMEDYLLFWIGSDNSAFANVVMTFNGC-DTVRYDAA---ENCLVTDASQPKRVLKRRYYLVEKAKDANIVGILVGTLGVAGYLHMIRQMKELIAGAGKKAYTLVVGRPNPAKLANFPE 341
BLAST of mRNA_L-elsbetiae_contig15132.3674.1 vs. uniprot
Match: UPI0019010AD4 (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 isoform X1 n=2 Tax=Benincasa hispida TaxID=102211 RepID=UPI0019010AD4) HSP 1 Score: 108 bits (271), Expect = 3.410e-22 Identity = 60/133 (45.11%), Postives = 85/133 (63.91%), Query Frame = 1 Query: 808 RVRIGGLGVELESEEELQRHVLVFVGGEGRQLSNVLMRCAGCVDRVRYDPALPPGQRVVGDTRKGNKDLMRRYYLVQRAREAGVIGIVVGTLGVQRYGSVVRSLREMIDGAGRKAYTLAVGKVNVAKLANFAE 1206 R IGGL EL E ++ L ++G E +NV++ GC + VRYD +V D K + L RRYYLV++A++AG++GI+VGTLG+ Y ++ ++E+I GAG+KAYTL +GK N AKLANF E Sbjct: 246 RHHIGGLFWELPRERRMEDCSLFWIGSENSAFANVVLTFNGC-EIVRYDAK---ESCLVTDVSKQRRILKRRYYLVEKAKDAGIVGILVGTLGLAGYLHIIHQMKELITGAGKKAYTLVMGKPNPAKLANFPE 374
BLAST of mRNA_L-elsbetiae_contig15132.3674.1 vs. uniprot
Match: A0A7J0E5S3_9ERIC (Diphthamide synthesis DPH2 family protein n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0E5S3_9ERIC) HSP 1 Score: 106 bits (265), Expect = 4.900e-22 Identity = 58/133 (43.61%), Postives = 85/133 (63.91%), Query Frame = 1 Query: 808 RVRIGGLGVELESEEELQRHVLVFVGGEGRQLSNVLMRCAGCVDRVRYDPALPPGQRVVGDTRKGNKDLMRRYYLVQRAREAGVIGIVVGTLGVQRYGSVVRSLREMIDGAGRKAYTLAVGKVNVAKLANFAE 1206 R RIGGL L +Q +++ +VG + +NV++ GC + VRYD A R+V D + L RRYYLV++A++A +IGI+VGTLGV Y ++ ++E++ AG+KAYTL +G+ N AKLANF E Sbjct: 78 RYRIGGLSWSLPESHTIQDYLIYWVGVDNAAFANVVLTFNGC-ELVRYDIA---ENRLVTDVSHQRRILKRRYYLVEKAKDANIIGILVGTLGVAGYLHMIHQMKELVTRAGKKAYTLVMGRPNPAKLANFPE 206
BLAST of mRNA_L-elsbetiae_contig15132.3674.1 vs. uniprot
Match: V4VSL0_CITCL (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=8 Tax=Citrus TaxID=2706 RepID=V4VSL0_CITCL) HSP 1 Score: 106 bits (265), Expect = 9.790e-22 Identity = 56/133 (42.11%), Postives = 87/133 (65.41%), Query Frame = 1 Query: 808 RVRIGGLGVELESEEELQRHVLVFVGGEGRQLSNVLMRCAGCVDRVRYDPALPPGQRVVGDTRKGNKDLMRRYYLVQRAREAGVIGIVVGTLGVQRYGSVVRSLREMIDGAGRKAYTLAVGKVNVAKLANFAE 1206 R IGGL + ++++ H+L ++G + +NV++ GC + VRYD +R++ D + K L RRYYLV++A++A +IG++VGTLGV Y ++ ++E+I AG+KAYTL +GK N AKLANF E Sbjct: 131 RHTIGGLVWNIPDRKKMEEHLLFWIGSDNSAFANVVLTFNGC-EIVRYDAT---EERLLTDVSQPLKILKRRYYLVEKAKDANIIGVLVGTLGVAGYLHMIHQMKELITKAGKKAYTLVMGKPNPAKLANFPE 259
BLAST of mRNA_L-elsbetiae_contig15132.3674.1 vs. uniprot
Match: A0A8C3M475_CHRPC (2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 n=1 Tax=Chrysolophus pictus TaxID=9089 RepID=A0A8C3M475_CHRPC) HSP 1 Score: 104 bits (260), Expect = 1.140e-21 Identity = 61/133 (45.86%), Postives = 87/133 (65.41%), Query Frame = 1 Query: 811 VRIGGLGVELESEEELQRHVLVFVGGEGRQLSNVLMRCAGCVDRVRYDPALPPGQRVVGDTRKGNKDLMRRYYLVQRAREAGVIGIVVGTLGVQRYGSVVRSLREMIDGAGRKAYTLAVGKVNVAKLANFAEV 1209 VR G +E+ EELQ + + +VG EG L++ ++ C +DPA G+ +T N+ LMRR YLV+RAR+A V+GI+VGTLGV Y V++ LR+++ AG+++YTL+VGK N AKLANF EV Sbjct: 34 VRQFGRRFHMEAAEELQDYSMFYVGAEGLALTSFMLTWNRC-PFSSFDPATGHGRH---ETLNVNRALMRRLYLVERARDARVVGILVGTLGVAGYLDVLQHLRQLVHRAGKRSYTLSVGKPNPAKLANFLEV 162 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15132.3674.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15132.3674.1 >prot_L-elsbetiae_contig15132.3674.1 ID=prot_L-elsbetiae_contig15132.3674.1|Name=mRNA_L-elsbetiae_contig15132.3674.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=403bp GRACLSPTNSSVPVLYVFGRGSLDVDDLASALLSGPLSVVPPGAASAGDGback to top mRNA from alignment at L-elsbetiae_contig15132:257..2469- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15132.3674.1 ID=mRNA_L-elsbetiae_contig15132.3674.1|Name=mRNA_L-elsbetiae_contig15132.3674.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2213bp|location=Sequence derived from alignment at L-elsbetiae_contig15132:257..2469- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15132:257..2469- >mRNA_L-elsbetiae_contig15132.3674.1 ID=mRNA_L-elsbetiae_contig15132.3674.1|Name=mRNA_L-elsbetiae_contig15132.3674.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2418bp|location=Sequence derived from alignment at L-elsbetiae_contig15132:257..2469- (Laminarionema elsbetiae ELsaHSoW15)back to top |