mRNA_L-elsbetiae_contig15118.3662.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15118.3662.1 vs. uniprot
Match: D8LI54_ECTSI (USP domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI54_ECTSI) HSP 1 Score: 100 bits (249), Expect = 9.130e-21 Identity = 59/125 (47.20%), Postives = 66/125 (52.80%), Query Frame = 1 Query: 271 MDNPAECTALVLYAAEEDRETLSTPTPARGN----ASNTXXXXXXXXXXXXXXXXXXXXXXRAGEHKAEXXXXXXXXXPA---KFVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKHDTALSS 624 MDNPA CTALVLYAA+E+ + P AR + A N G + + A +FVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKH SS Sbjct: 1 MDNPAACTALVLYAADENNTAATAPAAARDSSFDGAENRSAPAAVALGAVGDKIVGSAMKNGGGSEEVQKAAGLASTAVAAVPRFVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKHGPQSSS 125
BLAST of mRNA_L-elsbetiae_contig15118.3662.1 vs. uniprot
Match: A0A7S2RKP4_9STRA (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RKP4_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 3.950e-11 Identity = 31/41 (75.61%), Postives = 37/41 (90.24%), Query Frame = 1 Query: 493 PAKFVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKHDTA 615 P+ F GLSNQGATCY+NSLLQ+LYMTPEFR+ALY W++D A Sbjct: 59 PSSFRGLSNQGATCYLNSLLQSLYMTPEFRAALYSWQYDEA 99
BLAST of mRNA_L-elsbetiae_contig15118.3662.1 vs. uniprot
Match: A0A2P6NLB9_9EUKA (Ubiquitin carboxyl-terminal hydrolase 47 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NLB9_9EUKA) HSP 1 Score: 72.4 bits (176), Expect = 4.310e-11 Identity = 31/37 (83.78%), Postives = 35/37 (94.59%), Query Frame = 1 Query: 502 FVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKHDT 612 +VGLSNQGATCYMNSL+QTLYMTPEFR+ALY+W DT Sbjct: 1064 YVGLSNQGATCYMNSLIQTLYMTPEFRAALYKWSFDT 1100
BLAST of mRNA_L-elsbetiae_contig15118.3662.1 vs. uniprot
Match: A0A1R2ANJ0_9CILI (USP domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2ANJ0_9CILI) HSP 1 Score: 70.9 bits (172), Expect = 1.350e-10 Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = 1 Query: 499 KFVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKHD 609 KF GLSNQGATCYMNSLLQ+LYMTPEFR +Y WK+D Sbjct: 21 KFTGLSNQGATCYMNSLLQSLYMTPEFRQKIYNWKYD 57
BLAST of mRNA_L-elsbetiae_contig15118.3662.1 vs. uniprot
Match: A0A7S3IYX4_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3IYX4_9SPIT) HSP 1 Score: 65.9 bits (159), Expect = 1.430e-10 Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 1 Query: 499 KFVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKHDTA 615 K+ GL NQGATCY+NSL+QTLYMTPEFRS LY W + A Sbjct: 25 KYKGLQNQGATCYLNSLMQTLYMTPEFRSILYSWSYKEA 63
BLAST of mRNA_L-elsbetiae_contig15118.3662.1 vs. uniprot
Match: A0A3Q0J283_DIACI (ubiquitin carboxyl-terminal hydrolase 47-like n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A3Q0J283_DIACI) HSP 1 Score: 67.8 bits (164), Expect = 1.890e-10 Identity = 29/60 (48.33%), Postives = 39/60 (65.00%), Query Frame = 1 Query: 451 EHKAEXXXXXXXXXPAKFVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKHDTALSSPT 630 EH E P FVGL NQ TCY+NSL+Q L+MTPEFR+A+Y+WK++ ++ T Sbjct: 41 EHCEENQLDPSVSNPVNFVGLVNQAMTCYLNSLIQALFMTPEFRNAVYKWKYENDIAEET 100
BLAST of mRNA_L-elsbetiae_contig15118.3662.1 vs. uniprot
Match: A0A1R2B0T9_9CILI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2B0T9_9CILI) HSP 1 Score: 68.6 bits (166), Expect = 8.140e-10 Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = 1 Query: 499 KFVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKHD 609 +F GLSNQGATCYMNSLLQTL+MTPEF S LY+WK D Sbjct: 6 RFTGLSNQGATCYMNSLLQTLFMTPEFLSRLYQWKWD 42
BLAST of mRNA_L-elsbetiae_contig15118.3662.1 vs. uniprot
Match: A0A1R2BIN5_9CILI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BIN5_9CILI) HSP 1 Score: 68.6 bits (166), Expect = 8.170e-10 Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 1 Query: 502 FVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKHDTALSS 624 FVGLSNQGATCYMNSLLQTLYMTPEFR +Y+W ++ S Sbjct: 12 FVGLSNQGATCYMNSLLQTLYMTPEFRREIYKWTYEARHGS 52
BLAST of mRNA_L-elsbetiae_contig15118.3662.1 vs. uniprot
Match: A0A1R2BW28_9CILI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BW28_9CILI) HSP 1 Score: 68.6 bits (166), Expect = 8.170e-10 Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 1 Query: 502 FVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKHDTALSS 624 FVGLSNQGATCYMNSLLQTLYMTPEFR +Y+W ++ S Sbjct: 12 FVGLSNQGATCYMNSLLQTLYMTPEFRREIYKWTYEARHGS 52
BLAST of mRNA_L-elsbetiae_contig15118.3662.1 vs. uniprot
Match: UPI0018D964EC (ubiquitin carboxyl-terminal hydrolase 47-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D964EC) HSP 1 Score: 68.6 bits (166), Expect = 8.590e-10 Identity = 29/44 (65.91%), Postives = 36/44 (81.82%), Query Frame = 1 Query: 502 FVGLSNQGATCYMNSLLQTLYMTPEFRSALYEWKHDTALSSPTR 633 +VGL NQ TCY+NSLLQTLYMTPEFR+ALY+W D ++ PT+ Sbjct: 188 YVGLINQAMTCYLNSLLQTLYMTPEFRNALYKWCFDESVEDPTK 231 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15118.3662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15118.3662.1 >prot_L-elsbetiae_contig15118.3662.1 ID=prot_L-elsbetiae_contig15118.3662.1|Name=mRNA_L-elsbetiae_contig15118.3662.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=129bp MDNPAECTALVLYAAEEDRETLSTPTPARGNASNTTDTSATRAAVAAGPAback to top mRNA from alignment at L-elsbetiae_contig15118:766..2820+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15118.3662.1 ID=mRNA_L-elsbetiae_contig15118.3662.1|Name=mRNA_L-elsbetiae_contig15118.3662.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2055bp|location=Sequence derived from alignment at L-elsbetiae_contig15118:766..2820+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15118:766..2820+ >mRNA_L-elsbetiae_contig15118.3662.1 ID=mRNA_L-elsbetiae_contig15118.3662.1|Name=mRNA_L-elsbetiae_contig15118.3662.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=774bp|location=Sequence derived from alignment at L-elsbetiae_contig15118:766..2820+ (Laminarionema elsbetiae ELsaHSoW15)back to top |