mRNA_L-elsbetiae_contig1511.3659.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1511.3659.1
Unique NamemRNA_L-elsbetiae_contig1511.3659.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1511.3659.1 vs. uniprot
Match: D7FIB7_ECTSI (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIB7_ECTSI)

HSP 1 Score: 714 bits (1844), Expect = 4.890e-251
Identity = 389/522 (74.52%), Postives = 417/522 (79.89%), Query Frame = 1 
Query:  217 MGAGASCPT-TEPALSNAGKAALLTHLQAEYKVKSEGEGANEKVILDALKQSYAAKVKELEEAEKRGSDASEADIAATAAAFSEKFGGGGADPVSGGKTSDFRKRRLSVTATQALPKVAVEQNGRHNSMAMYTSQEIGAAPDTVPLPFPDAKSANQGEKPSCISLPGCLSACLQVGTYSCHGVEPSYNGVGDDDEGVTAKINQDRGCVVYPFNGDARHALFSVFDGHGEHGDVVSQFVMHELESVLAAHPSLLDDPAKALMESYVKVDESLAAAKGQEATFSGTTAVSVLMREGNLWIANAGDSRAVLATEDGNALKAVDLSVDQNPNSPKEQARARIEAAGGFVSPPPEPGLSSRVWLDAAMTQIGLAMARSIGDHAVKSIGVVAEPEVTTHTI------------------------------------------------------EGKDKFIVLASDGVWEFISSQDAIDIVNHSLEEGTMKATQELIEAAATKWREVEGDYRDDITAVVIRLPCFPE 1617
            MGAGAS P   +PALS+AGKAALLTHLQAEY  K+ GEGA++K ILD+LKQSY  KVKELEEAEK GSDAS+ +IAATAAAFSEKFGGGGA+PV+GGKTS+FRKRRLSVT+TQA+PKVAV ++ R NS+AMYTSQEIGAAPDTVPLPFPDAK                    +QVGTYSCHGVEPSY+  GDDD+GVTAKINQDRGCVVYPFN D +HALFSVFDGHGEHGDVVS FVMHEL++ LAAHPSLLDDPAKALMESYVKVDESLAA+KG+EATFSGTTAVSVLMRE NLWIANAGDSRAVLA EDG  LKAVDLSVDQNPNSPKEQAR  IEAAGGFVSPPPEPGLSSRVWLDAAMTQIGLAMARSIGDHAVKSIGVVAEPEVTTHTI                                                      +  DKFIVLASDGVWEF+ SQ+AIDIVN SLEEGTMKATQ+LIEAAATKWREVEGDYRDDITAVVIRLPCFPE
Sbjct:    1 MGAGASIPGGVDPALSDAGKAALLTHLQAEYVAKASGEGADDKSILDSLKQSYTTKVKELEEAEKNGSDASDTEIAATAAAFSEKFGGGGAEPVAGGKTSEFRKRRLSVTSTQAVPKVAVAESRRQNSIAMYTSQEIGAAPDTVPLPFPDAKRPRN---------------IMQVGTYSCHGVEPSYSTGGDDDDGVTAKINQDRGCVVYPFNEDPKHALFSVFDGHGEHGDVVSNFVMHELQACLAAHPSLLDDPAKALMESYVKVDESLAASKGEEATFSGTTAVSVLMRENNLWIANAGDSRAVLAHEDGAELKAVDLSVDQNPNSPKEQAR--IEAAGGFVSPPPEPGLSSRVWLDAAMTQIGLAMARSIGDHAVKSIGVVAEPEVTTHTIACMVSLHWLCTWVDRRQSQDRRKRCTLKAPRRFLEHLIENMGSSGSHKTKRTCVQAGDKFIVLASDGVWEFVKSQEAIDIVNTSLEEGTMKATQDLIEAAATKWREVEGDYRDDITAVVIRLPCFPE 505
[Close]
BLAST of mRNA_L-elsbetiae_contig1511.3659.1 vs. uniprot
Match: A0A835Z8U8_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8U8_9STRA)

HSP 1 Score: 461 bits (1186), Expect = 3.430e-152
Identity = 268/499 (53.71%), Postives = 327/499 (65.53%), Query Frame = 1 
Query:  217 MGAGASCPT--TEPALSNAGKAALLTHLQAEYKVKSEGEGANEKVILDALKQSYAAKVKELEEAEKRGSDA-------SEADIAATAAAFSEKFGG---------------------GGADPVSGGKTSDFRKRRLSVTATQALPKVAVEQNGRHNSMAMYTSQEIGAAPDTVPLPFPDAKSANQGEKPSCISLPGCLSACLQVGTYSCHGVEPSYNGVGDDDEGVTAKINQDRGCVVYPFNGDARHALFSVFDGHGEHGDVVSQFVMHELESVLAAHPSLLDDPAKALMESYVKVDESLAAAKGQEATFSGTTAVSVLMREGNLWIANAGDSRAVLATEDGNAL--KAVDLSVDQNPNSPKEQARARIEAAGGFVSPPPEPGLSSRVWLDAAMTQIGLAMARSIGDHAVKSIGVVAEPEVTTHTIEGKDKFIVLASDGVWEFISSQDAIDIVNHSLEEGTMKATQELIEAAATKWREVEGDYRDDITAVVIRLPCFPE 1617
            MGA AS  +   + ALS A KA L THL+  Y+ +S+    +E V+L++LK+ Y  K KEL  A K  SDA       S+A+ A  AAAF+ K                        G   P +  KTSDFRKRRLSVTA +  PK       R +++  Y +QEIGA     PLPF +                        +GTYSCHGVEPSY+    +++G+ AKINQDRGCVV+PF  + + A+F+VFDGHGEHGDV+S + MHEL+S L  HP+L+ DP  A  E+++ VD +LA   G EATFSGTTAV VLMRE +LWIANAGDSRAVLA     A    A DLS+DQNPNSP EQ R  IEAAGGFVSPPPEPGLS+RVWLD  MTQIGLAMARSIGDHAVK IGV+AEPEVT H +   D+F++LASDGVWEFISSQ+A++ +  +L++G M+ATQ LIEA+A +WREVEGDYRDD T  VIRLPCF E
Sbjct:    1 MGAAASVSSGVDDSALSEAAKAELFTHLKGIYEAESQQPTVSESVLLESLKREYVHKAKEL--AGKGSSDAVQLEGGVSDAEAAKQAAAFAAKLAQQAGEPHAAATPTATSPAGSPLGALSPPAVTKTSDFRKRRLSVTAKRGAPKQGAPDGRRVSTL--YRAQEIGAT-QVAPLPFAETL----------------------IGTYSCHGVEPSYS----EEDGIAAKINQDRGCVVFPFASNPKQAVFAVFDGHGEHGDVISHYAMHELQSRLEVHPALVSDPTLAFKETFIAVDRALAKTHGAEATFSGTTAVCVLMREDHLWIANAGDSRAVLAQHRAGAAGYTAKDLSIDQNPNSPAEQQR--IEAAGGFVSPPPEPGLSARVWLDREMTQIGLAMARSIGDHAVKGIGVIAEPEVTEHFLGPDDQFLILASDGVWEFISSQEAVETIAANLDKGCMRATQALIEASAQRWREVEGDYRDDCTCEVIRLPCFAE 466
[Close]
BLAST of mRNA_L-elsbetiae_contig1511.3659.1 vs. uniprot
Match: A0A6U1PER2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PER2_9STRA)

HSP 1 Score: 348 bits (892), Expect = 1.360e-109
Identity = 196/374 (52.41%), Postives = 243/374 (64.97%), Query Frame = 1 
Query:  499 GGKTSDFRKRRLSVTATQ---ALPKVAVEQNGRHNSMAMYTSQEIGAAPDTVPLPFPDAKSANQGEKPSCISLPGCLSACLQVGTYSCHGVEPSYNGVGDDDEGVTAKINQDRGCVVYPFNGDARHALFSVFDGHGEHGDVVSQFVMHELESVLAAHPSLLDDPAKALMESYVKVDESLAAAKGQEATFSGTTAVSVLMREGNLWIANAGDSRAVLATEDGNALKAVDLSVDQNPNSPKEQARARIEAAGGFVSPPPEPGLSSRVWLDAAMTQIGLAMARSIGDHAVKSIGVVAEPEVTTHTIEGKDKFIVLASDGVWEFISSQDAIDIVNHSLEEGTMKATQELIEAAATKWREVEGDYRDDITAVVIRLPCF 1611
            G  ++DFRKRRL++T  +   +  +    +  R +   ++ S EIG  P+  P PF                     S  L VG YSCHG+EPS+     DDEG TAKINQDRGCVVYP+N     A+F+VFDGHGE GD VS FVM  ++ +L  +    DDP +AL E++V+ +  L+  K  E  +SGTTAV VLM E  L++AN GDSRAV+AT+    L A +LS D NPN P EQ R  IE AGGFVSPPPEPGLS+RVWLD  MTQIGLAM+RSIGDHAVK IGV+ EPEV    I  +D+F +LASDGVWEFI SQ+A++IV   L +G   A Q LIE AA +W+  EGDYRDDITA+V R+PC 
Sbjct:   27 GSDSTDFRKRRLTLTQRKQRRSSEEXXXXKEQRGSEDRVFQSMEIGQVPE-APAPF---------------------STDL-VGHYSCHGIEPSW-----DDEGFTAKINQDRGCVVYPYNEAENQAVFAVFDGHGEKGDKVSHFVMSSIQDLLDKNSHFNDDPTRALKETFVETNRLLSEKK-IECMYSGTTAVLVLMIENKLFVANCGDSRAVMATQASGGLTAKNLSNDHNPNLPTEQRR--IEKAGGFVSPPPEPGLSARVWLDPEMTQIGLAMSRSIGDHAVKHIGVIPEPEVQIFDIAPEDQFFILASDGVWEFIDSQEAVNIVQQHLGQGATLACQRLIETAAHRWKLNEGDYRDDITAIVTRVPCL 369
[Close]
BLAST of mRNA_L-elsbetiae_contig1511.3659.1 vs. uniprot
Match: A0A4D9CWT4_9STRA (PPM-type phosphatase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWT4_9STRA)

HSP 1 Score: 335 bits (860), Expect = 6.970e-103
Identity = 198/373 (53.08%), Postives = 236/373 (63.27%), Query Frame = 1 
Query:  517 FRKRRLSVTATQALPKVAVEQNGRHNSMAMYTSQEIGAAPDTVPLPFPDAKSANQGEKPSCISLPGCLSACLQVGTYSCHGVEPSYNGVGDDDEGVTAKINQDRGCVVYPFNGDARHALFSVFDGHGEHGDVVSQFVMHELESVLAAHPSLLDDPAK---ALMESYVKVDESLAAAKGQEATFSGTTAVSVLMREGNLWIANAGDSRAVLATEDGNALK---AVDLSVDQNPNSPKEQARARIEAAGGFVSPPPEPGLSSRVWLDAAMTQIGLAMARSIGDHAVKSIGVVAEPEVTTHTI--EGKDKFIVLASDGVWEFISSQDAIDIVNHSLEEGTMKATQELIEAAATKWREVEGDYRDDITAVVIRLPCF 1611
            FR+RRL+      +P        +     ++ S EIG  P  VPLPF +                       QVGT+SCHG+EPSY     D     AKINQDRG  VYPF G  R ALF+VFDGHGE GD VS+F M+E+   L AH SL         AL ES++ VD  L    G +A FSGTTAV+ L++   LW+ANAGDSR  LAT D    K   A DLS DQNP+SP E AR  I   GG+VSP PEPGLS+RVWLD   TQ+GLAMARSIGD AVK +GVVAEPEV  +++  +G DKF++LASDGVWEFISSQ+A+DIVN  LE+G   A Q LIE AA +WR+VEGDYRDDITA++I LP F
Sbjct:  184 FRRRRLTFAMQGNIPPHTPLSQVQQR---VFRSLEIGDVPK-VPLPFREG----------------------QVGTFSCHGIEPSYL----DTRPFVAKINQDRGICVYPFAGHERMALFAVFDGHGEQGDKVSEFCMYEIPRALEAHSSLKGGDGNVIYALKESFLTVDSRLNLEVGIDAFFSGTTAVACLVKGKRLWVANAGDSRCTLATADPAGTKRLLARDLSTDQNPDSPGEMAR--IIKNGGYVSPSPEPGLSARVWLDPEYTQVGLAMARSIGDRAVKGVGVVAEPEVVEYSLSEDGSDKFLLLASDGVWEFISSQEAVDIVNAHLEKGVSAACQVLIEQAAGRWRDVEGDYRDDITALLIMLPLF 524
[Close]
BLAST of mRNA_L-elsbetiae_contig1511.3659.1 vs. uniprot
Match: A0A7S1UKE6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKE6_9STRA)

HSP 1 Score: 334 bits (857), Expect = 1.660e-101
Identity = 192/385 (49.87%), Postives = 243/385 (63.12%), Query Frame = 1 
Query:  490 PVSGGKTSDFRKRRLSVTATQALPKVAVEQ---------NGRHNSMAMYTSQEIGAAPDTVPLPFPDAKSANQGEKPSCISLPGCLSACLQVGTYSCHGVEPSYNGVGDDDEGVTAKINQDRGCVVYPFNGDARHALFSVFDGHGEHGDVVSQFVMHELESVLAAHPSLLDDPAKALMESYVKVDESLAAAKGQ-EATFSGTTAVSVLMREGNLWIANAGDSRAVLATEDGNALKAVDLSVDQNPNSPKEQARARIEAAGGFVSPPPEPGLSSRVWLDAAMTQIGLAMARSIGDHAVKSIGVVAEPEVTTHTIEGKDKFIVLASDGVWEFISSQDAIDIVNHSLEE-GTMKATQELIEAAATKWREVEGDYRDDITAVVIRLPCF 1611
            P       +FR+RRL++   Q     AV            GR   +  Y S EIG   +   LPF                    L+  L  GTYSCHGVEP +       +GV AKINQDRG +VYP+ GD R ALF+VFDGHGE G +VSQF M E+++ L  H S L DP  A+ E++V+VDE++     + E  +SGTTAV VLM E +L+IAN GDSRA +       L+A DLSVDQNPN+P E  R RIE AGG+VS PPE GLS+RVWLD AMTQIGLAM+RS+GDHAVK IGV+A PEV  H +  +D+F+++ASDGVWEFI+S +A+ I+   + E G  +A + LI  AA +W+E EGDYRDDITAVV++LPC 
Sbjct:  238 PTGDRNNPNFRERRLTLAKKQQDALGAVGDXXXXXXXXXGGRERQV--YKSGEIGEGKEAF-LPF--------------------LNTTL--GTYSCHGVEPDWYSA----DGVAAKINQDRGVIVYPYGGDNRKALFAVFDGHGERGQLVSQFCMTEIQARLEQHASFLTDPPLAMKETFVEVDEAMKDRGDEIEPVYSGTTAVMVLMHEKHLYIANVGDSRATVGRRTAGTLEAKDLSVDQNPNAPVE--RKRIEDAGGYVSEPPEEGLSARVWLDPAMTQIGLAMSRSLGDHAVKHIGVIARPEVLEHDLIDEDEFMIIASDGVWEFITSDEAVQIIGEYITELGASRACEILINIAAARWQEEEGDYRDDITAVVVKLPCL 591
[Close]
BLAST of mRNA_L-elsbetiae_contig1511.3659.1 vs. uniprot
Match: A0A7S3L068_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L068_9STRA)

HSP 1 Score: 317 bits (811), Expect = 1.530e-95
Identity = 169/322 (52.48%), Postives = 220/322 (68.32%), Query Frame = 1 
Query:  736 VGTYSCHGVEPSY--------NGVGDDDEGV-----------------------TAKINQDRGCVVYPFNGDARHALFSVFDGHGEHGDVVSQFVMHELESVLAAHPSLLDDPAKALMESYVKVDESLAAAKGQEATFSGTTAVSVLMREGNLWIANAGDSRAVLATEDGNALKAVDLSVDQNPNSPKEQARARIEAAGGFVSPPPEPGLSSRVWLDAAMTQIGLAMARSIGDHAVKSIGVVAEPEVTTHTIEGKDKFIVLASDGVWEFISSQDAIDIVNHSLEE-GTMKATQELIEAAATKWREVEGDYRDDITAVVIRLP 1605
            VGTYSCHGVEP Y        N  G+DD  +                        AKINQDRG + YP+    + ALF+V+DGHG+ G++VSQ+ +HE++  L  HP+   D  +A  E++V VD+SL      +  ++GTTAV  L+R+  L +ANAGDSRAVLA   G++  A+DL+ DQNP+SP EQAR  IE+ GG+VS PP PGLSSRVWLD+ +TQIGLAMARSIGDHA+  +GV+A+P VT   +E +D F++LASDGVWEF+SSQDA++IV   LEE G+ KA Q LIEAAA +W + EG+YRDDITA+V+RLP
Sbjct:  205 VGTYSCHGVEPIYESDYDSPDNESGEDDSPLETPNNDGTIELSQQDVVPTKVTMAAKINQDRGGIAYPYGNSRQTALFAVYDGHGQGGELVSQYALHEIQRRLERHPTFKSDLERAFRETFVAVDDSLRHEPIIDPYYAGTTAVVALLRDQKLTLANAGDSRAVLAQRTGDSWTALDLTQDQNPDSPGEQAR--IESMGGYVSAPPAPGLSSRVWLDSDLTQIGLAMARSIGDHAIGEVGVIADPVVTERVLEPQDDFMILASDGVWEFLSSQDAVNIVGEHLEERGSTKACQALIEAAAARWHDEEGEYRDDITAIVVRLP 524
[Close]
BLAST of mRNA_L-elsbetiae_contig1511.3659.1 vs. uniprot
Match: A0A7S4EFC8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EFC8_9STRA)

HSP 1 Score: 298 bits (764), Expect = 4.580e-89
Identity = 164/312 (52.56%), Postives = 210/312 (67.31%), Query Frame = 1 
Query:  736 VGTYSCHGVEPSYN------GVGDDDEG-------------VTAKINQDRGCVVYPFNGDARHALFSVFDGHGEHGDVVSQFVMHELESVLAAHPSLLDDPAKALMESYVKVDESLAAAKGQEATFSGTTAVSVLMREGNLWIANAGDSRAVLATE----DGNALKAVDLSVDQNPNSPKEQARARIEAAGGFVSPPPEPGLSSRVWLDAAMTQIGLAMARSIGDHAVKSIGVVAEPEVTTHTIEGKDKFIVLASDGVWEFISSQDAIDIVNHSLEEGTMKATQELIEAAATKWREVEGDYRDDITAVVIRL 1602
            VGT+SCHGVEP Y+       + D+D+              + AK NQDRG V +P+    R ALF+V+DGHG+ G++VSQ+ +HE++ +L  HP    +  KA  E++++VD SL      E  ++GTTA   L+R+  L ++NAGDSRAVLA       G   +A+DL+VDQNP+ P EQ R  IE+ GG+V+P PEPGLSSRVWLD   +QIGLAMARSIGDHAVKSIGV+AEP V+ H +   D F+VLA+DGVWEFISS +A+ IV   L +G  KA Q LIE AA KW + EGDYRDDITA VIRL
Sbjct:  184 VGTFSCHGVEPIYDDNVIYHSLEDEDDSTENQSGLSIIKPTMAAKTNQDRGGVAFPYGNCNRTALFAVYDGHGQGGELVSQYSLHEIQQLLERHPDFNRNIEKAFKETFLRVDSSLKDECLIEPMYAGTTACVALLRDKKLVLSNAGDSRAVLARNVEGNGGGCWEAIDLTVDQNPDLPAEQER--IESMGGYVTPAPEPGLSSRVWLDKECSQIGLAMARSIGDHAVKSIGVIAEPVVSFHDVRENDDFLVLATDGVWEFISSAEAVKIVAKHLHKGATKACQILIETAAEKWHDEEGDYRDDITAFVIRL 493
[Close]
BLAST of mRNA_L-elsbetiae_contig1511.3659.1 vs. uniprot
Match: A0A448ZK03_9STRA (PPM-type phosphatase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZK03_9STRA)

HSP 1 Score: 294 bits (753), Expect = 2.310e-87
Identity = 161/312 (51.60%), Postives = 213/312 (68.27%), Query Frame = 1 
Query:  736 VGTYSCHGVEPSYNGVG-----DDDEG--------------VTAKINQDRGCVVYPFNGDARHALFSVFDGHGEHGDVVSQFVMHELESVLAAHPSLLDDPAKALMESYVKVDESLAAAKGQEATFSGTTAVSVLMREGNLWIANAGDSRAVLA--TEDGNAL--KAVDLSVDQNPNSPKEQARARIEAAGGFVSPPPEPGLSSRVWLDAAMTQIGLAMARSIGDHAVKSIGVVAEPEVTTHTIEGKDKFIVLASDGVWEFISSQDAIDIVNHSLEEGTMKATQELIEAAATKWREVEGDYRDDITAVVIRL 1602
            VGT+SCHGVEP Y         DD++G              V AKINQDRG V +P+   ++ ALFSV+DGHG+ G++VSQ+ +HE++ +L  HP    +  KA  E++++VD SL      + T++G+TA   L+R+  L ++NAGDSRAVL   TE    +  +A+D++ DQNP+ P EQ R  IE  GG+V+P PEPGLSSRVWLD   +QIGLAMARSIGDHAVKSIGV+AEP V+ H +   D+F++LA+DGVWEFISS +++ +V   L +G  KA Q LIE AA KW + EGDYRDDITA+VIRL
Sbjct:  192 VGTFSCHGVEPIYEDDEFYRFLDDEDGSTDNPSSFSRKRATVAAKINQDRGGVAFPYGNCSKTALFSVYDGHGQGGELVSQYSLHEIQRLLEKHPDFNGNIEKAFKETFLRVDSSLKEECLIDPTYAGSTACVALLRDKTLVLSNAGDSRAVLGRKTERQREICWEAIDVTEDQNPDLPAEQER--IERMGGYVTPAPEPGLSSRVWLDKECSQIGLAMARSIGDHAVKSIGVIAEPVVSFHNVCENDEFLILATDGVWEFISSSESVQLVAEHLHKGATKACQILIETAAAKWHDEEGDYRDDITALVIRL 501
[Close]
BLAST of mRNA_L-elsbetiae_contig1511.3659.1 vs. uniprot
Match: A0A1Z5KTQ5_FISSO (PPM-type phosphatase domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KTQ5_FISSO)

HSP 1 Score: 293 bits (751), Expect = 2.590e-86
Identity = 164/343 (47.81%), Postives = 212/343 (61.81%), Query Frame = 1 
Query:  736 VGTYSCHGVEPSYNG----------------------------VGDDDEG------------------------VTAKINQDRGCVVYPFNGDARHALFSVFDGHGEHGDVVSQFVMHELESVLAAHPSLLDDPAKALMESYVKVDESLAAAKGQEATFSGTTAVSVLMREGNLWIANAGDSRAVLA--TEDGNALKAVDLSVDQNPNSPKEQARARIEAAGGFVSPPPEPGLSSRVWLDAAMTQIGLAMARSIGDHAVKSIGVVAEPEVTTHTIEGKDKFIVLASDGVWEFISSQDAIDIVNHSLEEGTMKATQELIEAAATKWREVEGDYRDDITAVVIRL 1602
            VGTYSCHGVEP Y                               G DD+                         + AKINQDRG V YP+  + R ALF+V+DGHG+ G+ VSQF +HE++  L  HP    +  KAL + ++ VDE+L      E  +SGTTA   L+ +  L +ANAGDSRAV+A  T +G++  AVDL++DQNP+ P+E  R  I A GG+VSP P PGLS+RVWLD   TQIGLAMARSIGDHAV  +GV+AEP ++T+ I  +D+F++LASDGVWEFI+S DA+ IV  +L+ G  KA Q LIEAAA KW E EG+YRDDITA+V+++
Sbjct:  226 VGTYSCHGVEPIYGDDXXXXXXXXXXXXXXXXKPAAFAGTHQRFGSDDDSSSSDTADAEANELSARKRPEERPTMVAKINQDRGGVAYPYGNNRRIALFAVYDGHGQGGEFVSQFALHEVQRRLEKHPDFGSNDGKALTDVFLAVDEALKDEPLIEPWYSGTTACVALLTKSILTLANAGDSRAVMARKTAEGSSWDAVDLTIDQNPDLPEEMER--IIAQGGYVSPAPAPGLSARVWLDPHYTQIGLAMARSIGDHAVSEVGVIAEPVISTYEISDQDEFMILASDGVWEFITSTDAVRIVGENLDRGATKACQALIEAAAAKWHEEEGEYRDDITAIVVKI 566
[Close]
BLAST of mRNA_L-elsbetiae_contig1511.3659.1 vs. uniprot
Match: A0A7R9YNV0_DIALT (Hypothetical protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YNV0_DIALT)

HSP 1 Score: 285 bits (729), Expect = 1.290e-85
Identity = 181/379 (47.76%), Postives = 218/379 (57.52%), Query Frame = 1 
Query:  517 FRKRRLSVTATQAL-----PKVAVEQNG---RHNSMAMYTSQEIGAAPDTVPLPFPDAKSANQGEKPSCISLPGCLSACLQVGTYSCHGVEPSYNGVGDDDEGVT-AKINQDRGCVVYPFNGDARHALFSVFDGHGEHGDVVSQFVMHELESVLAAHPSLLDDPAKALMESYVKVDESLAAAKGQEATFSGTTAVSVLMREGNLWIANAGDSRAVLATED-GNALKAVDLSVDQNPNSPKEQARARIEAAGGFVSPPPEP-GLSSRVWLDAAMTQIGLAMARSIGDHAVKSIGVVAEPEVTTHTIEGKDKFIVLASDGVWEFISSQDAIDIVNHSLEE-GTMKATQELIEAAATKWREVEGDYRDDITAVVIRLPCFPE 1617
            FR+RRLSV           P      NG   +     M  S E+G       LPFP             + +         VGTYSCHGVEP          G T AKINQDRG V YPF      A+FSVFDGHG  GD VS F M+ L+++L  HP L D PA+AL  SY++ D  L      +A  SGTTAV  +M    L++ANAGDSRAVLA       + A+DLS DQ P++P E AR  I+   GFVSPP E  G  +RVWLDA MT  GLAMARSIGDH V SIGV+AEPEV  H +   D F+++ASDGVWEFISS +A+ I    + + G  +A  +LIE AA KWRE EGDYRDDITA+V + PC  +
Sbjct:   22 FRRRRLSVADLDTSEFDDEPADEKSPNGTDSKRRIRRMSMSPEMGVVRKKSDLPFP-------------LEI---------VGTYSCHGVEPGMR------HGETSAKINQDRGAVCYPFADSDEIAMFSVFDGHGVCGDKVSHFAMNTLQAILEDHPLLTDKPAQALKHSYLQCDSLLKQEPTIDAELSGTTAVVTVMIGSKLFVANAGDSRAVLARRSPSGGVIALDLSEDQKPDTPAEMAR--IKKKKGFVSPPEEEWGGPARVWLDANMTLPGLAMARSIGDHLVTSIGVIAEPEVMEHELGRDDLFLIMASDGVWEFISSDEAVAICAPIVAQAGATEACTKLIERAAAKWREEEGDYRDDITAIVCKFPCLQQ 370
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1511.3659.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIB7_ECTSI4.890e-25174.52PPM-type phosphatase domain-containing protein n=2... [more]
A0A835Z8U8_9STRA3.430e-15253.71Phosphatase 2C-like domain-containing protein n=1 ... [more]
A0A6U1PER2_9STRA1.360e-10952.41Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9CWT4_9STRA6.970e-10353.08PPM-type phosphatase domain-containing protein n=2... [more]
A0A7S1UKE6_9STRA1.660e-10149.87Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3L068_9STRA1.530e-9552.48Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S4EFC8_9STRA4.580e-8952.56Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A448ZK03_9STRA2.310e-8751.60PPM-type phosphatase domain-containing protein n=1... [more]
A0A1Z5KTQ5_FISSO2.590e-8647.81PPM-type phosphatase domain-containing protein n=2... [more]
A0A7R9YNV0_DIALT1.290e-8547.76Hypothetical protein n=1 Tax=Diacronema lutheri Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1511contigL-elsbetiae_contig1511:627..9081 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score714.9
Seed ortholog evalue2.4e-203
Seed eggNOG ortholog2880.D7FIB7
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein serine/threonine phosphatase activity
EggNOG OGsCOG0631@1,KOG0698@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons11
Model size2312
Cds size1404
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815614.473923-UTR-L-elsbetiae_contig1511:626..8241622815614.473923-UTR-L-elsbetiae_contig1511:626..824Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1511 627..824 +
1691682992.2457435-UTR-L-elsbetiae_contig1511:626..8241691682992.2457435-UTR-L-elsbetiae_contig1511:626..824Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1511 627..824 +
1622815614.4880652-UTR-L-elsbetiae_contig1511:898..9161622815614.4880652-UTR-L-elsbetiae_contig1511:898..916Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1511 899..916 +
1691682992.2686765-UTR-L-elsbetiae_contig1511:898..9161691682992.2686765-UTR-L-elsbetiae_contig1511:898..916Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1511 899..916 +
1622815614.6173418-UTR-L-elsbetiae_contig1511:8389..90811622815614.6173418-UTR-L-elsbetiae_contig1511:8389..9081Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1511 8390..9081 +
1691682992.378368-UTR-L-elsbetiae_contig1511:8389..90811691682992.378368-UTR-L-elsbetiae_contig1511:8389..9081Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1511 8390..9081 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815614.5042324-CDS-L-elsbetiae_contig1511:916..9971622815614.5042324-CDS-L-elsbetiae_contig1511:916..997Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1511 917..997 +
1691682992.2776248-CDS-L-elsbetiae_contig1511:916..9971691682992.2776248-CDS-L-elsbetiae_contig1511:916..997Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1511 917..997 +
1622815614.518777-CDS-L-elsbetiae_contig1511:3429..35371622815614.518777-CDS-L-elsbetiae_contig1511:3429..3537Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1511 3430..3537 +
1691682992.2865982-CDS-L-elsbetiae_contig1511:3429..35371691682992.2865982-CDS-L-elsbetiae_contig1511:3429..3537Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1511 3430..3537 +
1622815614.5292144-CDS-L-elsbetiae_contig1511:4261..43771622815614.5292144-CDS-L-elsbetiae_contig1511:4261..4377Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1511 4262..4377 +
1691682992.2963626-CDS-L-elsbetiae_contig1511:4261..43771691682992.2963626-CDS-L-elsbetiae_contig1511:4261..4377Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1511 4262..4377 +
1622815614.5401933-CDS-L-elsbetiae_contig1511:4648..47961622815614.5401933-CDS-L-elsbetiae_contig1511:4648..4796Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1511 4649..4796 +
1691682992.3052392-CDS-L-elsbetiae_contig1511:4648..47961691682992.3052392-CDS-L-elsbetiae_contig1511:4648..4796Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1511 4649..4796 +
1622815614.5517101-CDS-L-elsbetiae_contig1511:4955..51751622815614.5517101-CDS-L-elsbetiae_contig1511:4955..5175Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1511 4956..5175 +
1691682992.3152332-CDS-L-elsbetiae_contig1511:4955..51751691682992.3152332-CDS-L-elsbetiae_contig1511:4955..5175Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1511 4956..5175 +
1622815614.5642822-CDS-L-elsbetiae_contig1511:5797..59461622815614.5642822-CDS-L-elsbetiae_contig1511:5797..5946Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1511 5798..5946 +
1691682992.3237126-CDS-L-elsbetiae_contig1511:5797..59461691682992.3237126-CDS-L-elsbetiae_contig1511:5797..5946Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1511 5798..5946 +
1622815614.5767882-CDS-L-elsbetiae_contig1511:6452..66321622815614.5767882-CDS-L-elsbetiae_contig1511:6452..6632Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1511 6453..6632 +
1691682992.3324425-CDS-L-elsbetiae_contig1511:6452..66321691682992.3324425-CDS-L-elsbetiae_contig1511:6452..6632Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1511 6453..6632 +
1622815614.5867965-CDS-L-elsbetiae_contig1511:6956..71391622815614.5867965-CDS-L-elsbetiae_contig1511:6956..7139Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1511 6957..7139 +
1691682992.3444362-CDS-L-elsbetiae_contig1511:6956..71391691682992.3444362-CDS-L-elsbetiae_contig1511:6956..7139Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1511 6957..7139 +
1622815614.5969133-CDS-L-elsbetiae_contig1511:7425..75331622815614.5969133-CDS-L-elsbetiae_contig1511:7425..7533Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1511 7426..7533 +
1691682992.3559134-CDS-L-elsbetiae_contig1511:7425..75331691682992.3559134-CDS-L-elsbetiae_contig1511:7425..7533Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1511 7426..7533 +
1622815614.6069686-CDS-L-elsbetiae_contig1511:8278..83891622815614.6069686-CDS-L-elsbetiae_contig1511:8278..8389Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1511 8279..8389 +
1691682992.3665004-CDS-L-elsbetiae_contig1511:8278..83891691682992.3665004-CDS-L-elsbetiae_contig1511:8278..8389Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1511 8279..8389 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1511.3659.1prot_L-elsbetiae_contig1511.3659.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1511 917..8389 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1511.3659.1

>prot_L-elsbetiae_contig1511.3659.1 ID=prot_L-elsbetiae_contig1511.3659.1|Name=mRNA_L-elsbetiae_contig1511.3659.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=468bp
MGAGASCPTTEPALSNAGKAALLTHLQAEYKVKSEGEGANEKVILDALKQ
SYAAKVKELEEAEKRGSDASEADIAATAAAFSEKFGGGGADPVSGGKTSD
FRKRRLSVTATQALPKVAVEQNGRHNSMAMYTSQEIGAAPDTVPLPFPDA
KSANQGEKPSCISLPGCLSACLQVGTYSCHGVEPSYNGVGDDDEGVTAKI
NQDRGCVVYPFNGDARHALFSVFDGHGEHGDVVSQFVMHELESVLAAHPS
LLDDPAKALMESYVKVDESLAAAKGQEATFSGTTAVSVLMREGNLWIANA
GDSRAVLATEDGNALKAVDLSVDQNPNSPKEQARARIEAAGGFVSPPPEP
GLSSRVWLDAAMTQIGLAMARSIGDHAVKSIGVVAEPEVTTHTIEGKDKF
IVLASDGVWEFISSQDAIDIVNHSLEEGTMKATQELIEAAATKWREVEGD
YRDDITAVVIRLPCFPE*
back to top

mRNA from alignment at L-elsbetiae_contig1511:627..9081+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1511.3659.1 ID=mRNA_L-elsbetiae_contig1511.3659.1|Name=mRNA_L-elsbetiae_contig1511.3659.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8455bp|location=Sequence derived from alignment at L-elsbetiae_contig1511:627..9081+ (Laminarionema elsbetiae ELsaHSoW15)
TGAGATTGTTGAGACTTGTTGTGCGGAAAACACCATTCCAAACCAAGACC
GCACAACTCACTCGTCACAACGCGAGCATTCGCTGTTCGGGAGACAAAAC
TACGAACAACGGACTTTCACTCAGCAGTGTGAGGTCCACCCAAGTTACCG
CAAAGTTGGGCGTCGCCTGAGAGTGGGCAACAACACATCGTTCTGTCTGC
CGAGCTTGTTGTCGTTGCCGGAGTTAGAAGCGGCCGGGGGGAAGTTCACG
TACAAAAGGTGCCAGGTGCCAGGCCGCCGACAGGTCAGATATGGGTGCCG
GGGCATCTTGTCCGACAACGGAGCCGGCGCTGTCTAACGCGGGGAAGGCT
GCGCTTCTCACACATCTCCAGGTATCATTGTCGCAGCGGTGGCAAGAAAG
GCGTACCACGTTGATCACATCTACGCCCTCATACAATCTGTCTGCCGCAC
CATGTAGTCTAGATTTCATCTCACTTGCTCTCTTGTTCTGTAAGCGTCCT
TCTACGTACAGACAATAGTGTCTGCCTCGGGAGGGTTGGGCTTCGACTTG
GACCACAGACGAGGATTTACCTTAGAGGCTGTGAGACTATTGTAGCAAGC
AGGCCAGCTGCTTTTAAACTAACCCTGAGCAGATTATTTTCATACATACT
CCTTGTTACAAGCAGTTTCGCTACCGGCCTCCCAAACGAGCGTATCTTGG
GATTATGTTAGTAGTCTACGACTGTCTCTACCCTGCTTCGTGTTTATGTT
CTAAATAGTCTACTTAATACGGGCAACAAATTATTTCGCTTCGATGTGTT
TCACAACAGGAGCGTGCAAAAAATTACGCAGTTTATTATCCTGCATGTTT
CAAGGATTTTTCGTGGAGTTCTCTCTTGCAAAGTCGGTCGCAGTCTACTG
TGGTTCCGACAACAAACAACAGCGAGCCAATCACAAAAGAATTTCAGAAC
GCGTTGTGACGCTGTGTCATAGTCACGGAAAATTATCGTACAGGGTGGCT
GAAGTATGGGTAAAGGTGGTTGTTCGGAAAGGCTCTTTTGAACTGTGGCG
TGACGATGCTATATTTAAGGTAATGGACAAAAGTGGGTGTACCCACCTCC
TTTTGGTACAAAAGTGTAGGCCAAACGCGGGCATGGGAGCTTGACGTCAT
CCACGGCAACACAACCCAGGCACCCTCGGGCTATTTTAGATTGGATAAAG
GTGGTTGCTTTTTGGATAGAAGTGGGTGAAGATCAAGATACAAGTGGGTG
TATGATAAATAGAGTAGAGTGATGTGGGTGTACCCACCCAGCAGGTATCA
GACTAAAGTGCGTGGTCTGTTGAGGCTCTGCGCGGCGAGAAATTACGATG
CTGACAGGGGTCACTTGCCATTTTCATCGGTAGACATGCAAGTGTACCGA
AACGCTCTTGGTGACACGCTTCACGAAACCCCCACGATTTTGTTGATCAG
CGATTTCTTAAGGGTGGACTACGTTTTCCATGTTAAAAATTGGGGGTACA
AGCTGAGTTGAGCAAGCAGCTCACTTTTGGTCGTTCGGGTCTAGCTCTGC
CATTTTTACGAATTTAGGCTTGGAACTTGGCCGTTGCTCCTACAAGGTTA
TAGGAGAGGCGCCGGTGCCGGAATATTTTTAGTCCGAGCTGATTTAGGTA
AAAAATAATCAATTGGCGCCGTAGTTGTGAGGTGTCCTAAGCTAGAATCG
ATACAAAACAAAGTGTCGCGGATCGAGCTGAAATCAGTGTGCACGTACCT
GGTGCAGTCGTGAACCTCTCGGCCAGGGCGATCCGAATTATATGCCGAAA
AATCAGACTCTAATTCGTAAAAATCGCGTCGGAAATCGCATTCAGCCATA
TTTTCGGTGTCTCGATCAACCCAGCTTGTAGAGATTCTAAGAGCCCGAAG
TGACACTTGCTTTTTTTGGTGAAGATTTTTCGTAATGCCCTACAAAAAAT
GCCGCAGACCTCTCTCCAGCCGCCCTTTCTCACCGCAAAACCGACTTTCG
CGCTTTGAAACAAGAACCGATACCAATATTCCTCAGTCGAGCTTTGGAGT
TGGTTGTCGTGAGGTAGCTCCTACTGTTGGTAGCAGAGCAGAGAGCAATA
TGAGGGGCGGTCGACTGAAAGAGTCCAAATCTGCACCGAGCAAACTATAT
TTTCGTGTGTCGGCAAAAGTGAGAGCGCGCAAGCTTGGGGTGGTACGCAG
CGGGGTTCGGCCATGGAGCGCTCGGGGTCTTTGGAGAGGGAGTCCTCGGC
TAAGCACCTCTTATAGGACCTTGGAGGAACATAGTTGGAACACAGCAGGA
GCGGTGCACAGTAGATTTCGATCTGGAGAACTTCGTGTTTTCAAATCATC
TCAAAACGCCCAATAATTTGTCAATGTCGCGGGGTTTGTTGAGCGAAACA
AAGCACACACACCCTGCAAACCAGCAGCAGCAGACACGCGAAGACGTAGC
CAGGATGCTTGTCTCCAAGGAAATATTGCTGAAGATAGCCAAACTGGTTC
CGACCTCCCTAGAACTTCCGATACCAAACACGTGTTCTTATTATAATGAT
TTCAAAGAGAAATAATCTGAAACCAGCAATTTTATTCCCCGAAACTTCAG
CACGTGGTCCACACCCTCGATGAAAGACTAAAAAATGCGTCTACCCTCAT
CGACAAAATTGCCCCTCTTGCGTGCAATCCAATTCACCCGCTGCTTCTCA
GCAACATCCCTCCGATCGTTCAACCATTGGTTTACACGGGGTAGCCGTGT
GAGCGACGCAAATGCCTCTCACCGTATCCACGAACGCTGCTTTCCGGGAA
CAGGCCGAGTACAAGGTGAAGTCGGAAGGGGAAGGGGCGAACGAGAAAGT
CATACTGGACGCCCTCAAGCAGAGCTACGCCGCCAAAGTAAAGGAACTAG
AAGAGGCGGAGGTGAGCTGCATTTTGAAGTTTCCCGCACATGATCCGAAG
AGCACGCGAGTGCACCTGCGAGCTAGGTACCCACTACTGCCCCTCTTCAG
CCGTCACGCTCCACCCAAGCTTATTTGCAAGCTTTCATGTATCGAGCAAT
GCTTGTCAGGAGGTCTTGTACTTGAAAAGCATCGAAATAGGTGTGTCGGG
CGAAGTGGCCGCGTATTCGGGAGTACTAAGCCGGCCCCCTTGCCTGGGAA
AGGGGTGATGTGTGCGGCGTAGAAGAAGCGCTTGGCTCCACGCGTAAGAA
ACACGTGGCCGCAGCATTTACAAAGCCAAGCGTGCTTCCCGAGGGAAACA
TGTTGAAGCTTGGCCCGTACATAGCACAGAAATGGCACCCACACAATGGC
TCGAACAACAGGTTGTGGCGCCCGTATTAGAACACGATATACGATCTACG
AAGAAAGGTGCCTCCACCCCAGGAAGCCTAGGCCCTGCAACACGCAACAC
GAGAAACATGCTCGCCCGTTCCATCTGCTGTTGTGGCCATATGACCCTAC
GAAGGAGAGACCTTTGATCGTTTCCAAAGCGTTCCTACCACAAACACCTT
GAAACATGAATCTGCGTTCCAACCAACCCCCCACTCGACGGCCATCCCCC
CCCCCCTCGCACTACTGCTGTGGGTCTGTCACCCTCTTGATGCCAAACCC
CATATTGGCTGTTGACGATGAATCGGTCGGTGTAGAAGCGCGGCAGCGAT
GCATCTGAAGCGGACATCGCGGCTACGGCGGCGGCCTTCTCGGAGAAATT
TGGCGGCGGCGGGGCAGACCCTGTGAGCGGCGGCAAGACGTCCGACTTCC
GGTGAGCTTTCGGGCATGTTGTTGTCCTCGTGGCGGTGGCTAGTGGCCGG
GGATGGTGATCACAACCAGCCCAGTAACGCGACTGTGCCCGCTCATAAGA
CCCTTGGTCGCAGCCCCGCCCCCTGCACGCGCGCGCGGGGGTTCTCCGGG
TACTTATGACACTCCGCGTTGAAAACCTATCGCCACACCCACACACATCG
GATAATGGGACAACCCCACGCCCACGGTCCACACGCCAACCGTTTTTCTC
TCTTACCTCCCTCCCCCGACAGGAAACGGCGGCTGTCCGTAACAGCAACC
CAGGCGCTGCCGAAGGTAGCCGTCGAGCAGAACGGCCGCCACAACTCTAT
GGCCATGTACACCAGCCAGGAGATCGGCGCGGCACCAGACACGGTGCCCC
TTCCTTTTCCAGACGCTAAGGTTCGCTGCTCGCTCCACTTATGCGGAACA
TGTTGTTGTTCTTGCTACCTCTTTGTTGGGTTTTGACCGCTTTTCCGAGG
CAAGCCCACGCGGCAAATGTGCGTTCTGTTCTCGGTCGGGTGGGAACAGA
CGCCTTGCGCGGCGAAAACGACGAGCGAGAGTGCGAATCAAGGTGAAAAA
CCGTCGTGCATCTCTCTCCCCGGCTGCCTATCTGCCTGCCTGCAGGTGGG
CACGTACTCGTGCCACGGCGTAGAGCCCAGCTACAACGGCGTCGGGGATG
ACGATGAGGGCGTGACGGCCAAGATCAACCAGGACCGGGGCTGCGTGGTG
TACCCTTTCAACGGCGATGCCAGGCACGCCCTCTTCTCCGTTTTCGACGG
TGAGTGATAGCCGTCTCACGTGGGGTCTCCAACGCTGGGTGCACGTGACA
ACAACCGGATAGAGACGCACCCTAGAAACCAAAACGTTCAAGAGAGGGAT
GGGCTCGGTTGCCAAAACACGAGAGAAGCATCGGCTCGCGGCCAAAGAAC
GATGCCCAGAGCTAAAAAGTCCAAAGAGATGGAGGGGCCCGGTTGCCAGA
AGACGAGAAAAGCATCGGCGTATCTGATGGTCCTCCGACTAGAACTGTGG
AAATCGCGCACCTTTCTTTAGGGTGGCGTGTTCAAAGTCGTGCGCCACAC
ATGCAGCTATGTACGCTGCTACAGTCATTTTAAGGCCTGGTGGTGTTGGG
TGTTTGACGCTTTTCGTTGAAAATTTGCCAGGTGTAAACGTTGTGGTTGG
AGGAACCGGCGTTGCTTGTTATTGCGGTACATGTGAATAGCACCGCCGGT
GGCGGTCCGCCTGTTGAGCTCGCGCCAGCGTACGTCGCGGAGAAACGAAA
CGTATCCTGAACGGCTGAAGCGGGAATGAATATCGGTGATTTTATTTCTC
GGTTTATCTCCCTCCCCAAGCGGGAATGAATGTCGGTGATTTTATTTTTC
GGTTTATCTCCCTCCCCCCAGGGCATGGAGAGCACGGCGACGTGGTATCC
CAATTCGTGATGCACGAGCTCGAGTCCGTCTTAGCGGCGCATCCCTCGTT
GCTCGATGACCCCGCCAAGGCGCTTATGGAGTCCTACGTCAAGGTCGACG
AGTCTCTCGCCGCGGCCAAGGTGCGCTAATGTCCTCGAGAGAAAAGCCGG
GGGCGGCTTCCAAGGCCGCAAACGAGGCCTGCCTGTGTTGTTGCCCTTGG
CTCGCTCCCATGTGTGTGTGTGTTTTCTCCCCCGATACAATCAGGGTGCG
TGCATGCGCCAAGCGCGCCATGATAACCTGCGTACAAGGTTTCAAGCGAA
AACAAAACTCCACGCTGATCTACCTGCGACTGGCGGCGCGGCATTGTTTT
GCCTGCTTTGTTCGGGCCGTATTTGTTTTGTATTTTCGTTCGGGCCGTGC
TCGCGTTGATTCCACCAATGTTACAGCTAATTGCGTAGCGCCATGTTATT
CGTTAGACTTCGGCTTTCATGTTCGCGCTTCCTCTGTCTCGAGCAAAATC
GTTTCCAGTTCCAGCACATCTCCGTACGTGAACAAAGCCATGAGTTTGCT
TTCAAGTCGCTTTTTGTTTTCGTGCAAGTGCCGGTGCTAACACCGCACGC
ACTGTTTTCCTCGTTGTCTCATGTAGGGGCAAGAAGCGACGTTCTCTGGG
ACCACGGCGGTGTCGGTGCTCATGCGGGAGGGCAACCTGTGGATCGCCAA
CGCGGGGGACAGCCGCGCCGTGCTCGCAACAGAGGACGGGAATGCGCTCA
AGGCCGTCGACCTCAGCGTTGACCAGAACCCCAACTCTCCGAAGGAACAG
GCACGTGTGTGTGACTACCCACCACGGGACCCCCATCTCGGAACCCCAGA
ACTTGTCTTGCTTCTGGTAAAGGATCGAAATTTTATTTTAATTATTAATG
TCTACAGATGGATGTCAGCAGTCTCTACGTCCAGTCTGCGAAAAAGTCGT
TCCAGACTGTTGTAGGCATATGCACTATTTTAATAACCCTCCTTTTCACA
CCATCCAAGCTAATGTTTATAATGCCTCCAAAGGGTTTCTACATATATGC
GAAGCACAAGGCTGGCGTTTCACGACAATTCGTCCGCCCCCCCGCGCGCG
AATACATCCACCCGCTGCCCGCGTCATTAGGCTCGCATCGAAGCCGCTGG
AGGGTTTGTGAGCCCCCCGCCCGAGCCCGGCCTCAGCTCGAGGGTGTGGC
TGGACGCCGCCATGACGCAGATTGGGTTGGCCATGGCACGCTCCATCGGA
GACCACGCGGTCAAGTCTATCGGGGTGGTGGCGGAGCCAGAGGTCACGAC
ACACACCATCGAGGTATGTATGTCGACTGACCAACGGGTGATGTTCTTGT
TTTTTGCACACCAGGGCTGCTATTTTCTCATTTCGTTTTTTGTGCAATTA
TGGCCGTTCGAAACCATGCATTCATTTATCAGTCCTACCAACCGCTCGCT
GCCTCGGCATGATCTCGTTCTCCGTCCCATATATGTAATTGGACGGAGAA
AACATGTGAATTTAGCCAGTCAAGCGCGGGCCGCCTGTTTTGCGGTTAGA
GGTCCAGATGAACAACCGCGTCAGAATCGCTCCGCTATCGACAAAGCAGG
GTAAGGACAAGTTCATCGTGCTGGCCTCGGACGGGGTATGGGAGTTCATT
TCGAGCCAGGACGCCATTGACATCGTTAACCACAGCTTGGAGGAGGGTAC
CATGAAGGTGCGATGCTGTACATGATCCCACATCGTTGCTCTCGCTGGCC
AGTACTAAATAACTGTTTTAGTGGCCGGAATCGTATCGGGAAGCTTGGAA
CGCTCGATATATCTACACATATATATGTACATGTAGATTTGGTGAAAGCA
GGGCAGGGAGAAAGGCACGACTAAGATAACCCCTGAAACAGATGTAACCC
CTGTAAGGGCTGCACGTTCGGAATCAGGCGTGGGCGTTGTCAAAGGTGGT
ATGCGTGTGCCAGAACAAGAAACATGGATGTGCTTGCCTAGCTTGCCGGG
ACCTAGAAAATGCTCCACTTTCACCCGCAAGAGGCTTTTCCGATGGGGAA
TGTTGCTCAATGGAAATCCACTTAGCCGCCGCCATTGATGACGTCAATTT
GCCACGAATGGAGAGTTTCGAAGCGTGGACATGCGGGGAGACGGCAGCTA
TACTCTTGTGCTGGGGGGGAGACCCTTGAGATTTTTGGCGGCATTTATGT
TTTATGTGCATATCTAGACTGCATGCACTCTCATTGTTGGGTTGGGTTTC
CTGTCGCATCAGCCTAGGCAGTCATGAGAAGAGTTGGATATTTTGCGGAT
ACACGCAATCACCGCCCCAAACGAAGAAAACATACAAACGTTTTGCAGAT
TTCGAATGTATAGATTTAAAAAAAATCGCATATATTTACATATGGTGTAC
GTACCACGAACGAAAATTATTTCGTCGTTCGACCGAAAACGCCCCCACAC
AGGCGACGCAAGAACTCATCGAGGCGGCCGCGACCAAGTGGCGGGAGGTG
GAAGGGGACTACCGCGATGACATCACCGCCGTTGTGATCCGCCTACCGTG
CTTCCCCGAATGAAAAGTCACAGCGCACCTAACTGATTGTGATGCATTGT
TGGCGGAGGAGACAGGACCAATTAGTGTTATTTCATTGAGACCGCACAAC
AGCAGCGGTCGGTCATGTTTAATTTTCACCCCAGCGACGAATCTGGCTGG
GCCTTGGTCGTCTCTTGTAGTAGGTCGCAACGGTCTCTACCCGGGGACAC
GGGGGGAGAGAAGAGCAGCAGTACATTGGCCGGGGGTCAGATGAAGAAAA
CTCACCACCCGTGTGTAACCCCATTCATATCGATCGGCCGTGGCGGCCGG
CCTAGAGTCAGCTGCGTGAAAGGACGAGAGAGAGGTTGAAACGACCTGTA
GCAGGCTAACGTGTGCAGCCCGCGGGGGTGAGCTGAACAGGCCCTGCACA
CTCTCGTGTGTCCCACCTCTCGCTCAGCGACAAGATAATAGACTAGGTAG
GCAAGTAATCGTAGAGAGAGGAAAGACAGAGAATGAGGCTGAGAAAGAGT
TCAGGAGACCACTGCCGCGTGCTTGTTTTTATTTTGTTCTCGGCGAAAAA
GACGCAGGACATTGTTGTGTCATATATTTGTATGCAGTTCCAAAATATGT
AGTATTTGTGGTGGAGGGTGTGGGTGAATGTAGTAGGCTACGTGTTGCAG
AATAGCTTGAGGTTTCCACCTCAGGAGTTGATTTTCCAGTCCGAAGTACA
CACGC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1511:627..9081+

>mRNA_L-elsbetiae_contig1511.3659.1 ID=mRNA_L-elsbetiae_contig1511.3659.1|Name=mRNA_L-elsbetiae_contig1511.3659.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2808bp|location=Sequence derived from alignment at L-elsbetiae_contig1511:627..9081+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGTGCCGGGGCATCTTGTCCGACAACGGAGCCGGCGCTGTCTAACGC
GGGGAAGGCTGCGCTTCTCACACATCTCCAGATGGGTGCCGGGGCATCTT
GTCCGACAACGGAGCCGGCGCTGTCTAACGCGGGGAAGGCTGCGCTTCTC
ACACATCTCCAGGCCGAGTACAAGGTGAAGTCGGAAGGGGAAGGGGCGAA
CGAGAAAGTCATACTGGACGCCCTCAAGCAGAGCTACGCCGCCAAAGTAA
AGGAACTAGAAGAGGCGGAGGCCGAGTACAAGGTGAAGTCGGAAGGGGAA
GGGGCGAACGAGAAAGTCATACTGGACGCCCTCAAGCAGAGCTACGCCGC
CAAAGTAAAGGAACTAGAAGAGGCGGAGAAGCGCGGCAGCGATGCATCTG
AAGCGGACATCGCGGCTACGGCGGCGGCCTTCTCGGAGAAATTTGGCGGC
GGCGGGGCAGACCCTGTGAGCGGCGGCAAGACGTCCGACTTCCGAAGCGC
GGCAGCGATGCATCTGAAGCGGACATCGCGGCTACGGCGGCGGCCTTCTC
GGAGAAATTTGGCGGCGGCGGGGCAGACCCTGTGAGCGGCGGCAAGACGT
CCGACTTCCGGAAACGGCGGCTGTCCGTAACAGCAACCCAGGCGCTGCCG
AAGGTAGCCGTCGAGCAGAACGGCCGCCACAACTCTATGGCCATGTACAC
CAGCCAGGAGATCGGCGCGGCACCAGACACGGTGCCCCTTCCTTTTCCAG
ACGCTAAGGAAACGGCGGCTGTCCGTAACAGCAACCCAGGCGCTGCCGAA
GGTAGCCGTCGAGCAGAACGGCCGCCACAACTCTATGGCCATGTACACCA
GCCAGGAGATCGGCGCGGCACCAGACACGGTGCCCCTTCCTTTTCCAGAC
GCTAAGAGTGCGAATCAAGGTGAAAAACCGTCGTGCATCTCTCTCCCCGG
CTGCCTATCTGCCTGCCTGCAGGTGGGCACGTACTCGTGCCACGGCGTAG
AGCCCAGCTACAACGGCGTCGGGGATGACGATGAGGGCGTGACGGCCAAG
ATCAACCAGGACCGGGGCTGCGTGGTGTACCCTTTCAACGGCGATGCCAG
GCACGCCCTCTTCTCCGTTTTCGACGAGTGCGAATCAAGGTGAAAAACCG
TCGTGCATCTCTCTCCCCGGCTGCCTATCTGCCTGCCTGCAGGTGGGCAC
GTACTCGTGCCACGGCGTAGAGCCCAGCTACAACGGCGTCGGGGATGACG
ATGAGGGCGTGACGGCCAAGATCAACCAGGACCGGGGCTGCGTGGTGTAC
CCTTTCAACGGCGATGCCAGGCACGCCCTCTTCTCCGTTTTCGACGGGCA
TGGAGAGCACGGCGACGTGGTATCCCAATTCGTGATGCACGAGCTCGAGT
CCGTCTTAGCGGCGCATCCCTCGTTGCTCGATGACCCCGCCAAGGCGCTT
ATGGAGTCCTACGTCAAGGTCGACGAGTCTCTCGCCGCGGCCAAGGGCAT
GGAGAGCACGGCGACGTGGTATCCCAATTCGTGATGCACGAGCTCGAGTC
CGTCTTAGCGGCGCATCCCTCGTTGCTCGATGACCCCGCCAAGGCGCTTA
TGGAGTCCTACGTCAAGGTCGACGAGTCTCTCGCCGCGGCCAAGGGGCAA
GAAGCGACGTTCTCTGGGACCACGGCGGTGTCGGTGCTCATGCGGGAGGG
CAACCTGTGGATCGCCAACGCGGGGGACAGCCGCGCCGTGCTCGCAACAG
AGGACGGGAATGCGCTCAAGGCCGTCGACCTCAGCGTTGACCAGAACCCC
AACTCTCCGAAGGAACAGGCACGTGGGCAAGAAGCGACGTTCTCTGGGAC
CACGGCGGTGTCGGTGCTCATGCGGGAGGGCAACCTGTGGATCGCCAACG
CGGGGGACAGCCGCGCCGTGCTCGCAACAGAGGACGGGAATGCGCTCAAG
GCCGTCGACCTCAGCGTTGACCAGAACCCCAACTCTCCGAAGGAACAGGC
ACGTGCTCGCATCGAAGCCGCTGGAGGGTTTGTGAGCCCCCCGCCCGAGC
CCGGCCTCAGCTCGAGGGTGTGGCTGGACGCCGCCATGACGCAGATTGGG
TTGGCCATGGCACGCTCCATCGGAGACCACGCGGTCAAGTCTATCGGGGT
GGTGGCGGAGCCAGAGGTCACGACACACACCATCGAGGCTCGCATCGAAG
CCGCTGGAGGGTTTGTGAGCCCCCCGCCCGAGCCCGGCCTCAGCTCGAGG
GTGTGGCTGGACGCCGCCATGACGCAGATTGGGTTGGCCATGGCACGCTC
CATCGGAGACCACGCGGTCAAGTCTATCGGGGTGGTGGCGGAGCCAGAGG
TCACGACACACACCATCGAGGGTAAGGACAAGTTCATCGTGCTGGCCTCG
GACGGGGTATGGGAGTTCATTTCGAGCCAGGACGCCATTGACATCGTTAA
CCACAGCTTGGAGGAGGGTACCATGAAGGGTAAGGACAAGTTCATCGTGC
TGGCCTCGGACGGGGTATGGGAGTTCATTTCGAGCCAGGACGCCATTGAC
ATCGTTAACCACAGCTTGGAGGAGGGTACCATGAAGGCGACGCAAGAACT
CATCGAGGCGGCCGCGACCAAGTGGCGGGAGGTGGAAGGGGACTACCGCG
ATGACATCACCGCCGTTGTGATCCGCCTACCGTGCTTCCCCGAATGAGCG
ACGCAAGAACTCATCGAGGCGGCCGCGACCAAGTGGCGGGAGGTGGAAGG
GGACTACCGCGATGACATCACCGCCGTTGTGATCCGCCTACCGTGCTTCC
CCGAATGA
back to top