mRNA_L-elsbetiae_contig15088.3644.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15088.3644.1 vs. uniprot
Match: A0A6H5L4A6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A6_9PHAE) HSP 1 Score: 422 bits (1086), Expect = 9.620e-142 Identity = 219/276 (79.35%), Postives = 238/276 (86.23%), Query Frame = 1 Query: 37 QFDFSKQDTPVRP-----TRHPDTRTSYDILNHVPREKAHSVALMYADGEGPEVLPQKVVTVEGGKKPHSHKKRDVDVLSNRFLEKHDERMVEEKRFLRDAAEEKYRRTHDYNIIAGAYYDQTKERNFVKSREKLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKTIVKNDS-SVADRGLTKRTRGRQAHEDNVRQHERAAAISEQRALNRPSHQRHAEVLRTGHNVISNRIFTGREGKPPPQPRAKPPVPVWDRLSRQPGKPEAAAAASRPT 846 QFD S++ + P +RHPDTRTSYDILNHVP+EKAHSVAL+Y + +GPEVLPQKVVTVEGGKKPHSH +RDVDVLSNRFLEKH+ERM EEKRFLR+ AEEKYRRTHDYNIIAGAYYDQ KER FV SREKL TMQGRAQQYRLPPSIRYGEGNGYNIINQQPK T+V S SV DRGL+KRTRGRQ +EDN+RQHERAAA SEQ+ LNRPSH RH EVLRTGHNVISN+ F GREGKPPPQPRAKPP+PVWDRL + G PEAAA SRPT Sbjct: 44 QFDVSRKSREMDPVLMRYSRHPDTRTSYDILNHVPKEKAHSVALIYPNDKGPEVLPQKVVTVEGGKKPHSHLRRDVDVLSNRFLEKHEERMTEEKRFLRERAEEKYRRTHDYNIIAGAYYDQDKEREFVNSREKLLTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKTTVVDMTSASVQDRGLSKRTRGRQTYEDNIRQHERAAAASEQQILNRPSHMRHVEVLRTGHNVISNQDFAGREGKPPPQPRAKPPMPVWDRLKGEHGMPEAAALGSRPT 319
BLAST of mRNA_L-elsbetiae_contig15088.3644.1 vs. uniprot
Match: D8LS80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS80_ECTSI) HSP 1 Score: 310 bits (793), Expect = 1.070e-98 Identity = 163/209 (77.99%), Postives = 178/209 (85.17%), Query Frame = 1 Query: 229 SHKKRDVD--VLSNRFLEKHDERMVEEKRFLRDAAEEKYRRTHDYNIIAGAYYDQTKERNFVKSREKLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKTIVKNDS-SVADRGLTKRTRGRQAHEDNVRQHERAAAISEQRALNRPSHQRHAEVLRTGHNVISNRIFTGREGKPPPQPRAKPPVPVWDRLSRQPGKPEAAAAASRPT 846 S K R++D ++ +RFLEKH+ERM EEKRFLR+ AEEKYRRTHDYNIIAGAYYDQ KER FV SR+KL TMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKT+V S SV DRGL+KRTRGRQ +EDN+RQHERAAA SEQR LNRPSH RH EVLRTGHNVISN+ F GREGKPPPQPRAKPP+PVWDRL + PEAAA S PT Sbjct: 32 SRKSREMDPVLMRHRFLEKHEERMTEEKRFLRERAEEKYRRTHDYNIIAGAYYDQDKERKFVNSRDKLLTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKTVVDMTSASVQDRGLSKRTRGRQTYEDNIRQHERAAAASEQRTLNRPSHMRHVEVLRTGHNVISNQDFAGREGKPPPQPRAKPPMPVWDRLKGKHEMPEAAAIGSMPT 240
BLAST of mRNA_L-elsbetiae_contig15088.3644.1 vs. uniprot
Match: A0A7S1CID5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CID5_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 2.020e-17 Identity = 69/248 (27.82%), Postives = 117/248 (47.18%), Query Frame = 1 Query: 70 RPTRHPDTRTSYDILNHVPREKAHSVALMYADGEGPEVLPQKVVTVEGGKKPHSHKKRDVDVLSNRFLEKHDERMVEEKRFLRDAAEEKYRRTHDYNIIAGAYYDQTKERNFVKSREKLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKTIVKNDSSVADRGLTKRTRGRQAHEDNVRQHERAAAIS---EQRALNRPSHQRHAEVLRTGHNVISNRIFTGREGKPPPQPRAKPPVPVWDRLSRQ 804 RP D+RT+Y+I+ ++ + H + P++ + K RD D++SNR++E H+E+ ++ R AA E++ +T +N + AYYD+ KE F ++ + G Q RLPPS++ EG YN+++ + + DR K ++ R E R RA + EQR L+R S+QR E + G+N+++N F G + R+ P W R + Sbjct: 121 RPPPRADSRTNYNIITNMGLHEHHYLPPGQRPPXXXXXXPKETLASRTTK-------RDFDLISNRYMEAHEEKDAVDREMQRQAAAERFWQTRSFNPVTCAYYDEKKEDAFKQTVAEETRTWGSKQFARLPPSVKVSEGVAYNVLSMEERNAEA---MRARDRIKAKASKARIGPEVEARVKARAEKVEDIMEQRTLHRVSYQRDREARKHGYNLLTNAPFQGLNSTTVFESRSAKPTSAWARAEEE 358
BLAST of mRNA_L-elsbetiae_contig15088.3644.1 vs. uniprot
Match: F0XZ19_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ19_AURAN) HSP 1 Score: 94.4 bits (233), Expect = 3.740e-17 Identity = 71/267 (26.59%), Postives = 133/267 (49.81%), Query Frame = 1 Query: 25 ILTHQFDFSKQDTPVRPT-RHPDTRTSYDILNHVPREKAHSVALMYADGEGPEVLPQKVVT---VEGGKKPHSHKKRDVDVLSNRFLEKHDERMVEEKRFLRDAAEEKYRRTHDYNIIAGAYYDQTKERNFVKSREKLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQPK-KTIVKNDSSVADRGLTKR---TRGRQAHEDNVRQHERAAAISEQRALNRPSHQRHAEVLRTGHNVISNRIFTGREGKPPPQPRAKPPVPVWDRLSR 801 I+TH+F K P+ + PD+RTS++I+NH ++ P P+K V E G P S K+R+ D++SN+++ H R + ++ + +A++ + THD++ + G YYD KE +F K R L ++ G+ RLPP+++Y EG Y+I++ K + ++ S V +R + + + + + +V++ +R + + R G++V+++ GR +P R K P W +LS+ Sbjct: 93 IVTHEFRSGKTPAERAPSNKPPDSRTSWNIINHKAKD--------------PRAPPRKSVVDARAESGLLPASWKRREFDIVSNKYISDHKGRTLRDRTEAKHSAQKLFWETHDFDPLLGRYYDAGKEADFAKQRAVLSSIAGQGSVARLPPAVQYCEGAAYDIVSHAVKDQAKLEVASGVGNRAIASKKGPSVEAELRDRSVKRDDRDKSRALARFAKTVDFCEREGGRHHGYDVLTHESHVGRLARPMATMRIKKPDGPWQQLSK 345
BLAST of mRNA_L-elsbetiae_contig15088.3644.1 vs. uniprot
Match: A0A7S4DDP7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDP7_HETAK) HSP 1 Score: 85.9 bits (211), Expect = 1.570e-15 Identity = 73/229 (31.88%), Postives = 110/229 (48.03%), Query Frame = 1 Query: 64 PVRPTRHPDTRTSYDILNHVPREKAHSVALMYADGEGPEVLPQKVVTVEGGKKPHSHKKRDVDVLSNRFLEKHDERMVEEKRFLRDAAEEKYRRTHDYNIIAGAYYDQTKERNFVKSREKLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKTIVKNDS-SVADRGLTKR--TRGRQAHEDNVRQHERAAAISEQRALNRPSHQRHAEVLRTGHNVISNRIFTGREG 741 P R PDTR +++ILNH A A PE VV +KP++ +L+NRFL HD ++ E+ EE++ +THDY+ I G YY KE+ F R + G+AQ+ RLPPS+ + EG Y+I+ K ++ ++ADR L ++ R A + + E AA R+L R R A +G++ ++N F GR G Sbjct: 5 PAYRQRPPDTRLTFNILNHQTLPGHPEPAARSA----PEAGEAAVVPPARSRKPYN-------ILNNRFLHDHDGKVAAERAAAAARTEEQFWQTHDYHPIEGRYYHPDKEKEFEALRRAAAAVHGQAQRRRLPPSVVHSEGQTYDILTAAAKDARRAAEAEAIADRALRQKQGARTEAAQKTRALEEEDLAAA---RSLGRVHPARFAST--SGYDPLTNVGFQGRTG 217
BLAST of mRNA_L-elsbetiae_contig15088.3644.1 vs. uniprot
Match: A0A482T1S9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T1S9_9ARCH) HSP 1 Score: 78.2 bits (191), Expect = 7.800e-12 Identity = 57/187 (30.48%), Postives = 94/187 (50.27%), Query Frame = 1 Query: 241 RDVDVLSNRFLEKHDERMVEEKRFLRDAAEEKYRRTHDYNIIAGAYYDQTKERNFVKSREKLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKTIVKNDS-SVADRGLTKRTRGRQAHEDNVRQHERAAAISEQRALNRPSHQRHAEVLRTGHNVISNRIFTGREGKPPPQPRAKPPVPVWDRLS 798 R+ +V+SN + HD+R +E+ L+ +KY HDY++I G +Y K++ + + E + ++QG AQ RLPPS++Y +GN YN++ N + +V +R L R + Q + E A E +NR QR + + G N I+N++ P P P P +W RL+ Sbjct: 120 REFNVISNEYKVNHDKRRLEDFEKLKTHLLKKYWDNHDYDMIKGRFYSPEKQKLYEEHLETIKSVQGTAQMERLPPSLKYSDGNSYNLLTHDVYDQEKLNSTLTVTNRSLN-RVKKLQKEAEQKANGELEAQAKEHLHMNRIKFQRWEQQVDRGFNFITNQVV---HETPAPLPCR--PATMWARLT 300
BLAST of mRNA_L-elsbetiae_contig15088.3644.1 vs. uniprot
Match: A0A7S3NS64_EUPCR (Hypothetical protein (Fragment) n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3NS64_EUPCR) HSP 1 Score: 75.1 bits (183), Expect = 7.940e-11 Identity = 60/194 (30.93%), Postives = 101/194 (52.06%), Query Frame = 1 Query: 241 RDVDVLSNRFLEKHDERMVEEKRFLRDAAEEKYRRTHDYNIIAGAYYDQTKERNFVKSREKLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQPKKTIVKNDSSVADRGLT-KRTRGRQAHEDNVRQHERAAAISEQR-----ALNRPSHQRHAEVLRTGHNVISNRIFTGR--EG-KPPPQPRAKPPVPVWDRL 795 RD ++++NR+LE +DE++V +K R A +KY +THDY+ + YYD KE+ FV RE + G+ +LP S + EG YN IN + ++++ + +R L K R R ++ +H R + E +LN+ + QR + G ++++N+ F EG K +P KPP W ++ Sbjct: 167 RDYNIITNRYLELNDEKVVVDKEIERLNAAKKYWKTHDYDPVNTQYYDPDKEQEFVDEREHNAKIHGQDWVQKLPKSWKE-EGGLYNPINGK-----IEDEKRLWERDLKEKNKRKRYEKRYDMERHARKVGLGEDERQQKISLNKVNIQRFRDTTERGFDILTNKQFNNPVDEGSKTLHEPFVKPPASTWTKI 354
BLAST of mRNA_L-elsbetiae_contig15088.3644.1 vs. uniprot
Match: Q24FD2_TETTS (Uncharacterized protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q24FD2_TETTS) HSP 1 Score: 69.7 bits (169), Expect = 4.990e-9 Identity = 57/206 (27.67%), Postives = 108/206 (52.43%), Query Frame = 1 Query: 103 YDILNHVPREKAHSVALMYADGEGPEVLPQKVVTVEGGKKPHSHKKRDVDVLSNRFLEKHDERMVEEKRFLRDAAEEKYRRTHDYNIIAGAYYDQTKERNFVKSREKLGTMQGRAQQYRLPPSIRYGEGNGYNIINQQPK--KTIVKNDSSVADRGLTKRTRGRQAHEDNVRQHERAAAISEQRALNRPSHQRHAEVLRTGHNVIS 714 Y+I+++ P EK MY E +VL Q+ V +E KK K RD ++++N++ E H+ ++ ++ +++ +EKYR+TH +NI++G YD +E+ F + ++ G+ +LPPS+RY E ++ P+ K I + + R + + HE N+ +R +QR LN Q++ + + G ++I+ Sbjct: 119 YNIISNTPLEK-----YMY---ENVKVLKQEKV-IE--KKTDLSKTRDFNIITNKYTENHETKIQNDEETVKNKLDEKYRKTHKFNIVSGLLYDPDQEKAFQEQLKETNQSHGKNAILKLPPSLRYRETVIFDRNKPIPEELKLIDQQRENAKKRYKIRYAVENEYHERNLEIQDRR----QQRLLNGLCDQKYLDEYKKGFDIIT 309
BLAST of mRNA_L-elsbetiae_contig15088.3644.1 vs. uniprot
Match: A0A812V6G6_9DINO (TruC protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812V6G6_9DINO) HSP 1 Score: 59.7 bits (143), Expect = 6.690e-6 Identity = 64/255 (25.10%), Postives = 118/255 (46.27%), Query Frame = 1 Query: 85 PDTRTSYDILNHVPREKAHSVALMYADGEGPEVLPQKVVTVEGGKKPHSHKKRDVDVLSNRFLEKHDERMVEEKRFLRDAAEEKYRRTHDYNIIAGAYYDQTKERNFVKSREKLGTMQGRAQQYRLPPSIRYGE-GNGYNIINQQPKKTIVKNDSSVADRGLTKRTRGRQAHEDNVRQHERAA-AISEQRALNRPSHQRHAEVLRTGHNVISNRIFTGREGKPPPQPRAKPPVPVWDRL-SRQPGKPEAAAAASR 840 PDT Y+I++++P + H P+ P+ + + + +D ++L+NR+LE H E+M ++ A EK R+T +N + + D E + L T + + + + P I G N Y+++N Q K + + AD R R R E+N ++ + A+ A + Q NR +H+R A + G ++++N+ F G++GK +P W + +P P +A + SR Sbjct: 119 PDTAADYNIISNLPFNEHHWAH--------PDHRPRPSQRIPKQRMAPAMLHKDFNILTNRYLEHHKEKMDRDRELNLLEAAEKLRQTSAFNPVQQRFCDPRHEERMRACEDAL-TTEIKLRGEEVQPLIYRGSVTNAYDMLNHQVKDPDLLHLIEGADEERKVRFRTRHQLEENTKKMDVASDARAMQMKANRVAHERFAPSIERGFDILTNQDF-GQKGKQIHTSNTRPHQTPWQKACENRPTPPPSALSTSR 363
BLAST of mRNA_L-elsbetiae_contig15088.3644.1 vs. uniprot
Match: A0A1Q9DWL2_SYMMI (tRNA pseudouridine synthase C n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DWL2_SYMMI) HSP 1 Score: 59.3 bits (142), Expect = 1.120e-5 Identity = 67/271 (24.72%), Postives = 127/271 (46.86%), Query Frame = 1 Query: 85 PDTRTSYDILNHVPREKAHSVALMYADGEGPEVLPQKVVTVEGGKKPHSHKKRDVDVLSNRFLEKHDERMVEEKRFLRDAAEEKYRRTHDYNIIAGAYYDQTKERNFVKSREKLGTMQGRAQQYRLPPSIRYGE-GNGYNIINQQPKKTIVKNDSSVADRGLTKRTRGRQAHEDNVRQHERAA-AISEQRALNRPSHQRHAEVLRTGHNVISNRIFTGREGKPPPQPRAKPPVPVWDRL-SRQPGKPEAAAAASRPTRGQDGSQREEEGIS 888 PDT Y+I++++P + H P+ P+ + + + +D ++L+N++LE H E+M ++ A EK R+T +N + + D E + L T + + + + P I G N Y+++N Q K + + AD R R R E+N ++ + A A + Q NR +H+R A + G ++++N+ F G++GK +P W ++ +P P +A + SR Q+ +++ E+G S Sbjct: 119 PDTAADYNIISNLPFNEHHWAH--------PDHRPRPSQRIPKQRMAPAMLHKDFNILTNKYLEHHKEKMDRDRELNLLEAAEKLRQTSAFNPVQQRFCDPRHEERMRACEDAL-TTEIKLRGEEVQPLIYRGSVTNAYDMLNHQVKDRDLLHLIEGADEERKVRFRTRHQLEENTKKMDVAYDARAMQMKANRVAHERFAPTVERGFDILTNQDF-GQKGKQIHTSNTRPHQTPWQKVCENRPTPPPSAKSTSREV-AQEATEKAEQGQS 378 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15088.3644.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15088.3644.1 >prot_L-elsbetiae_contig15088.3644.1 ID=prot_L-elsbetiae_contig15088.3644.1|Name=mRNA_L-elsbetiae_contig15088.3644.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=329bp MYADGEGPEVLPQKVVTVEGGKKPHSHKKRDVDVLSNRFLEKHDERMVEEback to top mRNA from alignment at L-elsbetiae_contig15088:597..2780- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15088.3644.1 ID=mRNA_L-elsbetiae_contig15088.3644.1|Name=mRNA_L-elsbetiae_contig15088.3644.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2184bp|location=Sequence derived from alignment at L-elsbetiae_contig15088:597..2780- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15088:597..2780- >mRNA_L-elsbetiae_contig15088.3644.1 ID=mRNA_L-elsbetiae_contig15088.3644.1|Name=mRNA_L-elsbetiae_contig15088.3644.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1974bp|location=Sequence derived from alignment at L-elsbetiae_contig15088:597..2780- (Laminarionema elsbetiae ELsaHSoW15)back to top |