mRNA_L-elsbetiae_contig15086.3643.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15086.3643.1 vs. uniprot
Match: D8LC21_ECTSI (VPS11_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC21_ECTSI) HSP 1 Score: 205 bits (522), Expect = 3.470e-58 Identity = 105/140 (75.00%), Postives = 112/140 (80.00%), Query Frame = 1 Query: 1 TVADTLLELLLREWAQAGEASGXXXXXXXXXXXXXKKLREDEVMALLDNPRAGYDADHALVLVQMLNFKPGQLYLYEKLYMTDLVLEHYVDTGDTRNMLRVCRKEGTNNPDLWVQVLSYLVNSAASPGDAEQPPHAPIKD 420 TVADTLLELLLREWA AG KK REDEVMALLDNPRAGYDADHALVLVQMLNFKPGQLYLYEKLYMT+LVLEHYVDTGDTRNM+RVCRKEG NNPDLWVQVLSYLVN+ S GD ++ +P+ D Sbjct: 789 TVADTLLELLLREWAAAGSGQ---RGGSSGGGLAVKKQREDEVMALLDNPRAGYDADHALVLVQMLNFKPGQLYLYEKLYMTELVLEHYVDTGDTRNMIRVCRKEGNNNPDLWVQVLSYLVNNVPSSGDIQE--SSPLPD 923
BLAST of mRNA_L-elsbetiae_contig15086.3643.1 vs. uniprot
Match: A0A836CMH8_9STRA (VPS11_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMH8_9STRA) HSP 1 Score: 147 bits (371), Expect = 7.850e-38 Identity = 76/126 (60.32%), Postives = 91/126 (72.22%), Query Frame = 1 Query: 4 VADTLLELLLREWAQAG---EASGXXXXXXXXXXXXXKKLREDEVMALLDNPRAGYDADHALVLVQMLNFKPGQLYLYEKLYMTDLVLEHYVDTGDTRNMLRVCRKEGTNNPDLWVQVLSYLVNSA 372 V DTLLELLLR+WA+ EA G K+ E E+MALLD+PRA YDADHALVL ML F PGQLYLYEKL MT L+LEHY++TG+TRNMLR+C++EG +PDLW VLS+LV+ A Sbjct: 713 VCDTLLELLLRDWARLAAEVEAGGGGGDALSE-----KRACEAEIMALLDSPRAEYDADHALVLALMLGFTPGQLYLYEKLNMTGLILEHYMNTGNTRNMLRICKREGAKSPDLWATVLSHLVSRA 833
BLAST of mRNA_L-elsbetiae_contig15086.3643.1 vs. uniprot
Match: A0A7R9U613_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U613_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 8.290e-20 Identity = 43/90 (47.78%), Postives = 60/90 (66.67%), Query Frame = 1 Query: 124 EVMALLDNPRAGYDADHALVLVQMLNFKPGQLYLYEKLYMTDLVLEHYVDTGDTRNMLRVCRKEGTNNPDLWVQVLSYLVNSAASPGDAE 393 ++MALL+ P YDADHALVL QM NF+ GQL L E+L +T+LVL+ + D GD + +++CR+ G PDLW +VL Y V + A+ Sbjct: 15 KIMALLEEPDCLYDADHALVLTQMANFRKGQLLLLERLRLTELVLQAHADDGDLASQIKLCRRAGRARPDLWSRVLRYAVETTMEEPSAD 104
BLAST of mRNA_L-elsbetiae_contig15086.3643.1 vs. uniprot
Match: UPI000719D0D5 (vacuolar protein sorting-associated protein 11 homolog n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719D0D5) HSP 1 Score: 92.8 bits (229), Expect = 4.410e-19 Identity = 47/122 (38.52%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 4 VADTLLELLLREWAQAGEASGXXXXXXXXXXXXXKKLREDEVMALLDNPRAGYDADHALVLVQMLNFKPGQLYLYEKLYMTDLVLEHYVDTGDTRNMLRVCRKEGTNNPDLWVQVLSYLVNS 369 V +TL+EL L + AS +K++E++++ +L NP AGYD D ALVL QM NF+ G LYLYEK + +L H+++ + N++ C+K GT P+LWVQ L Y + Sbjct: 85 VYNTLIELYLHDVVHEASAS-------------QRKVKEEKILGMLQNPAAGYDIDQALVLCQMHNFRLGVLYLYEKSKLYQQILSHHMEHKEYTNIVDTCKKFGTEEPNLWVQALWYFAKT 193
BLAST of mRNA_L-elsbetiae_contig15086.3643.1 vs. uniprot
Match: A0A7S2HPF2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HPF2_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 5.630e-19 Identity = 45/100 (45.00%), Postives = 65/100 (65.00%), Query Frame = 1 Query: 109 KLREDEVMALLDNPRAGYDADHALVLVQMLNFKPGQLYLYEKL-----------YMTDLVLEHYVDTGDTRNMLRVCRKE----GTNNPDLWVQVLSYLV 363 K++ED VM LL N + YD HALVLVQ++ FK GQ YLYE+L +TDL+++ +++ GD +LRVC++E G NPDLW +VL+++V Sbjct: 24 KMKEDSVMTLLRNDKVPYDRYHALVLVQVMEFKDGQHYLYERLAKDSSAADLGGVVTDLLVDFHLERGDFDEILRVCKRESKANGRPNPDLWTKVLTHMV 123
BLAST of mRNA_L-elsbetiae_contig15086.3643.1 vs. uniprot
Match: UPI000719B11C (vacuolar protein sorting-associated protein 11 homolog n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719B11C) HSP 1 Score: 92.8 bits (229), Expect = 9.080e-19 Identity = 47/122 (38.52%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 4 VADTLLELLLREWAQAGEASGXXXXXXXXXXXXXKKLREDEVMALLDNPRAGYDADHALVLVQMLNFKPGQLYLYEKLYMTDLVLEHYVDTGDTRNMLRVCRKEGTNNPDLWVQVLSYLVNS 369 V +TL+EL L + AS +K++E++++ +L NP AGYD D ALVL QM NF+ G LYLYEK + +L H+++ + N++ C+K GT P+LWVQ L Y + Sbjct: 613 VYNTLIELYLHDVVHEASAS-------------QRKVKEEKILGMLQNPAAGYDIDQALVLCQMHNFRLGVLYLYEKSKLYQQILSHHMEHKEYTNIVDTCKKFGTEEPNLWVQALWYFAKT 721
BLAST of mRNA_L-elsbetiae_contig15086.3643.1 vs. uniprot
Match: A0A196SFE1_BLAHN (Vacuolar protein sorting-associated protein 11 homolog n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SFE1_BLAHN) HSP 1 Score: 91.7 bits (226), Expect = 2.310e-18 Identity = 48/117 (41.03%), Postives = 70/117 (59.83%), Query Frame = 1 Query: 4 VADTLLELLLREWAQAGEASGXXXXXXXXXXXXXKKLREDEVMALLDNPRAGYDADHALVLVQMLNFKPGQLYLYEKLYMTDLVLEHYVDTGDTRNMLRVCRKEGTNNPDLWVQVLS 354 V +T+LEL LR+ + E S + E EVM++L +PRA YD D ALVLVQM +FK GQ++LYEK M ++++H+ TG+T + C++ G P LW+Q+LS Sbjct: 663 VWNTILELYLRKDLLSQELSSAKTPEIDA-------IYEQEVMSILTDPRAAYDCDQALVLVQMHDFKKGQVFLYEKYKMYSMLVKHFSSTGETDRAIETCKRVGKEEPSLWLQLLS 772
BLAST of mRNA_L-elsbetiae_contig15086.3643.1 vs. uniprot
Match: UPI0007115E34 (vacuolar protein sorting-associated protein 11-like protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007115E34) HSP 1 Score: 89.7 bits (221), Expect = 1.080e-17 Identity = 45/119 (37.82%), Postives = 72/119 (60.50%), Query Frame = 1 Query: 1 TVADTLLELLLREWAQAGEASGXXXXXXXXXXXXXKKLREDEVMALLDNPRAGYDADHALVLVQMLNFKPGQLYLYEKLYMTDLVLEHYVDTGDTRNMLRVCRKEGTNNPDLWVQVLSY 357 T+ +T LEL LR E S ++ + +VM++L NP+A YD D AL+LVQM++FK G+LYLY KL M ++L++Y++ G+T ++ VC+ G LW+Q+L++ Sbjct: 651 TLWNTTLELFLRR--DLVEESMIAKYGDSCSEEAIEEKYQKDVMSILQNPKANYDDDQALMLVQMVDFKEGKLYLYRKLQMYSMLLKYYMELGNTEKVIEVCKDYGHEEQSLWIQLLTF 767
BLAST of mRNA_L-elsbetiae_contig15086.3643.1 vs. uniprot
Match: A0A7S1XWN4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWN4_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 1.540e-17 Identity = 49/124 (39.52%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 4 VADTLLELLLREWAQA-GEASGXXXXXXXXXXXXXKKLREDEVMALLDNPRAGYDADHALVLVQMLNFKPGQLYLYEKLYMTDLVLEHYVDTGDTRNMLRVCRKEGTNNPDLWVQVLSYLVNSA 372 VA+ LLEL L W Q+ GEA K +++ LL++P YDA+HALV+ QM F+ GQL L E+L +T+LVL+ + D GD +++CR+ G PDLW +VL V ++ Sbjct: 165 VANPLLELYLGRWEQSSGEA---------------KTWSAKKILDLLEDPECMYDANHALVMTQMAQFRRGQLLLLERLRLTELVLQAHADDGDLAAQIKLCRRAGRGRPDLWSRVLRDAVEAS 273
BLAST of mRNA_L-elsbetiae_contig15086.3643.1 vs. uniprot
Match: A0A3R6ZYB3_9STRA (RING-type domain-containing protein (Fragment) n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6ZYB3_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 5.510e-17 Identity = 44/119 (36.97%), Postives = 70/119 (58.82%), Query Frame = 1 Query: 4 VADTLLELLLREWAQAGEASGXXXXXXXXXXXXXKKLREDEVMALLDNPRAGYDADHALVLVQMLNFKPGQLYLYEKLYMTDLVLEHYVDTGDTRNMLRVCRKEGTNNPDLWVQVLSYL 360 + +TLLE++L + ++ A+ E V+ALLDNPR YD DHAL+L+QM K G+ YLY+KL+M ++L+H+++ GD +L ++ G +NP+LW+ L Y Sbjct: 164 IGNTLLEMVLGDVGRSPAAA----EEDAEDKPIIMATNEAAVLALLDNPRVKYDEDHALILMQMHGLKQGKRYLYQKLHMYHMLLQHHMEEGDDLAVLDQVKQHGESNPNLWLLALKYF 278 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15086.3643.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15086.3643.1 >prot_L-elsbetiae_contig15086.3643.1 ID=prot_L-elsbetiae_contig15086.3643.1|Name=mRNA_L-elsbetiae_contig15086.3643.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=171bp TVADTLLELLLREWAQAGEASGGGGGGGSSSSLAAKKLREDEVMALLDNPback to top mRNA from alignment at L-elsbetiae_contig15086:1020..3759- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15086.3643.1 ID=mRNA_L-elsbetiae_contig15086.3643.1|Name=mRNA_L-elsbetiae_contig15086.3643.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2740bp|location=Sequence derived from alignment at L-elsbetiae_contig15086:1020..3759- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15086:1020..3759- >mRNA_L-elsbetiae_contig15086.3643.1 ID=mRNA_L-elsbetiae_contig15086.3643.1|Name=mRNA_L-elsbetiae_contig15086.3643.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1026bp|location=Sequence derived from alignment at L-elsbetiae_contig15086:1020..3759- (Laminarionema elsbetiae ELsaHSoW15)back to top |