mRNA_L-elsbetiae_contig15061.3632.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15061.3632.1 vs. uniprot
Match: A0A6H5KXK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK7_9PHAE) HSP 1 Score: 350 bits (897), Expect = 7.870e-111 Identity = 192/291 (65.98%), Postives = 228/291 (78.35%), Query Frame = 1 Query: 637 GNTKAPLLDKRGHRRKSSNYSGEEDGGED-SPRHQRQPTRAAEGNQSSLCGPGGLLSPRRVRVLLLLFCLVTMMEIGFAQMYPLWLLASKDTGGLEWSVPKIGKVLGWAGVGIMLFQFAAYPALVRTIGIIRLLRGSGMFCALLFLALPDVQRLASSENASYVLGVAAVVLVGSCTSVAETAMSLASANAVPVKMRGKVGGIFAVSGSLGRVIGPAALSSLLAWSLHARSSSDRHNRLVDYHAVFVVEMVLMVVVVLLGRKALTLESLTIPIEHRHGAEYEPVLQWSGEIT 1506 G K+PLLDK+GHRR SNYS EE+ G+D SPRH R A +SSLCGPGGLL+PRRVR+L+L+ CLV++M+ GF QMYPLWLLASKD+GGLEW VPKIGKVLGW+GVG +LFQF YPAL +TIGI+ LLRGSG+ A F+ +PD+QR SEN SYV+GVA V+ +GSC SV ETAM+LASANAVPV MRGK+GGIFAV+ S GRVIGPA L +LLAWSL + N L+DYHAVFVVEMVLM V+ +LGR LTLE+LTIP+E R GAEYE + S +IT Sbjct: 55 GKVKSPLLDKKGHRRNISNYSAEEECGDDASPRHLRWSGSTARDGESSLCGPGGLLTPRRVRLLVLMQCLVSIMDAGFVQMYPLWLLASKDSGGLEWPVPKIGKVLGWSGVGQLLFQFFVYPALCKTIGIVWLLRGSGLLAAAGFIFVPDIQRANWSENGSYVVGVAIVIFIGSCISVVETAMNLASANAVPVPMRGKMGGIFAVASSFGRVIGPAGLCTLLAWSLQSS------NVLMDYHAVFVVEMVLMSVMFVLGRNVLTLEALTIPVEDRRGAEYESISVSSTDIT 339
BLAST of mRNA_L-elsbetiae_contig15061.3632.1 vs. uniprot
Match: D8LP15_ECTSI (Transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP15_ECTSI) HSP 1 Score: 282 bits (722), Expect = 1.270e-86 Identity = 152/223 (68.16%), Postives = 177/223 (79.37%), Query Frame = 1 Query: 838 CLVTMMEIGFAQMYPLWLLASKDTGGLEWSVPKIGKVLGWAGVGIMLFQFAAYPALVRTIGIIRLLRGSGMFCALLFLALPDVQRLASSENASYVLGVAAVVLVGSCTSVAETAMSLASANAVPVKMRGKVGGIFAVSGSLGRVIGPAALSSLLAWSLHARSSSDRHNRLVDYHAVFVVEMVLMVVVVLLGRKALTLESLTIPIEHRHGAEYEPVLQWSGEIT 1506 CLV+MM+ GF QMYPLWLLASKD+GGLEW VPKIGKVLGW+GVG +LFQF YPAL +TIGI+ LLRGSG+ A F+ +PD+QR SEN S V+G A V+ +GSC SV ETAM+LASANAVPV MRGK+GGIFAV+ S GRVIGPA L +LLAWSL + N L+DYHAVFV+EMVLM V+ +LGRK LTLE+LTIPIE RHGAEYE V S +IT Sbjct: 3 CLVSMMDAGFVQMYPLWLLASKDSGGLEWPVPKIGKVLGWSGVGQLLFQFFVYPALCKTIGIVWLLRGSGVLAAASFIFVPDIQRANWSENWSCVVGAAIVIFLGSCISVVETAMNLASANAVPVPMRGKIGGIFAVASSFGRVIGPAGLCTLLAWSLQSS------NVLLDYHAVFVIEMVLMSVMFVLGRKVLTLEALTIPIEDRHGAEYESVSVSSADIT 219
BLAST of mRNA_L-elsbetiae_contig15061.3632.1 vs. uniprot
Match: D7G0M0_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M0_ECTSI) HSP 1 Score: 199 bits (507), Expect = 6.600e-52 Identity = 157/484 (32.44%), Postives = 246/484 (50.83%), Query Frame = 1 Query: 1 RFLYGLANSINPIARIMTVELLGPENAVIGIAFVPGSRAIGSIIGPVIGGLFAQPAVFYPSKFSSTGLFARYPFLLPNLAVALVAFLSLPFVLFVLPETLRLERGGVGNDKGAAVENRSIDP--SGLAELDALGLEDDGSSIAMLALTEGMRAPPAHDRSARDLCCDREAPIA-GTSLAAAKPRSRISSSXXXXXXXXXXXASEGGKGNRMDLEEGNTKAPLLDKRGHRRKSSNYSGEEDGGEDSPRHQRQPTRAAEGNQSS-LCGPGGLLSPRRVRVLLLLFCLVTMMEIGFAQMYPLWLLASKDTGGLEWSVPKIGKVLGWAGVGIMLFQFAAYPALVRTIGIIRLLR-GSGMFCALLFLALPDVQRLASSENASYVLGVAAVVLVGSCTSVAETAMSLASANAVPVKMRGKVGGIFAVSGSLGRVIGPAALSSLLAWSLHARSSSDRHNRLVDYHAVFVVEMVLMVVVVLLGRKALTLESL 1437 RF+ GL N I P R E+ GPE+ V+G+ ++ G+RAI +IG IGGL AQPA+ YP+ FS TGLFA YPFLLPNL A+++ +L V+F LPET + D +V S DP S A ++ GSS + + T +P H + R+ + G + + KG L + ++ PL ++ + DG + S + + A +G++ L GPGGLL+ V+++L L C++ + IGF ++YPL+ L++ GGL W+ +IG+V+ AG+ + + Q +P ++ +GI R G G+ A FLA+P + + ++ + L V A L+ A+SL S VP +MRGK+GG++ + SLGR GP ++ AWS+ + S+ + VDYH VF + +VVV ++ + LT+ESL Sbjct: 93 RFILGLTNGIMPALRTSLSEVCGPEHVVLGMTYISGTRAISMVIGTGIGGLLAQPALHYPTVFSPTGLFAMYPFLLPNLVGAVLSVFALFLVIFYLPETKDYNKRRFSRD---SVRTASTDPRRSPSASPGRSSRKNCGSSTSAINSTNPTESPSLHLQQXXXXXXGRQKKLPYGADIDRRE------------------------KGEGAPLYQHLSQEPLAGDASFPASAAEKT--TDGSKSSTCATDELSAAEQGDEEQGLFGPGGLLARPHVKLVLFLGCIIATLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVMVVAGLLLAVCQLVLFPPFIKMVGITYFQRLGCGVGVAA-FLAVPGLTSIGWDYDSLFSLSVVANNLIMCSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSV-SPSTLEAFGGWVDYHLVFCASALALVVVGVMAWRTLTVESL 545
BLAST of mRNA_L-elsbetiae_contig15061.3632.1 vs. uniprot
Match: D8LRH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH9_ECTSI) HSP 1 Score: 170 bits (431), Expect = 5.020e-41 Identity = 152/497 (30.58%), Postives = 228/497 (45.88%), Query Frame = 1 Query: 1 RFLYGLANSINPIARIMTVELLGPENAVIGIAFVPGSRAIGSIIGPVIGGLFAQPAVFYPSKFSSTGLFARYPFLLPNLAVALVAFLSLPFVLFVLPETLRLE--RGGVGND-------KGAAVENR---SIDPSGLAEL-------DALGLEDDGSSIAMLALT----EGMRAPP----AHDRSARDLCCD------REAPIAGTSLAAAKPRSRISSSXXXXXXXXXXXASEGGKGNRMDLEEGNTKAPLLDKRGHRRKSSNYSGEEDGGEDSPRHQRQPTRAAEGNQSSLCG-----PGGLLSPRRVRVLLLLFCLVTMMEIGFAQMYPLWLLASKDTGGLEWSVPKIGKVLGWAGVGIMLFQFAAYPALVRTIGIIRLLRGSGMFCALLFLALPDVQRLASSENASYVLGVAAVVLVGSCTSVAETA---MSLASANAVPVKMRGKVGGIFAVSGSLGRVIGPAALSSLLAWSLHARSSSDRHNRLVDYHAVF 1368 RFL G+ N + I++ MT E+ G E+ G+A+V G +IG +IGP +GGL A+PA YP+ FS +GLF R+P+LLPN+ A +A LPFV F L ET + RG + + VE +++ G+ E+ + L + +GS + L EG RA RS C D R + L +A RS A G G + + E T L + K+ + + GGE + S C P LL+ RR R ++ ++ L + + IG ++YPLW L++ +GGL+WS +IG+ L G+ ++ FQ YP L + IG R R + +FL P + L +E L A++VL+ +VA T ++LA+ NAV RG + G+ +GSL + GP SS+ AWS+ R R +DYH F Sbjct: 130 RFLLGVLNGLLGISKAMTSEVCGKEHEATGMAYVLGCASIGLVIGPGLGGLLAEPATHYPTVFSQSGLFGRFPYLLPNIVGAGIALTGLPFVFFFLKETRHVHNNRGDSSGEFKLLSVSEAGTVETHEAATVEEGGMVEMTPTARTQNTLESDTNGSGRDNILLADRRAEGSRAVRYDGGIEGRSGTADCYDIDEDHGRNSGEQSRQLLSASGRSSNDDYVDDGDERDEAAAFGAGGGRKSNRERFRTTTRALQRL---EKAKGFGDSDSGGE------------GRWGRRSTCWRECLVPIQLLTERRTRNVMFVYALFSFVAIGNRELYPLWALSTVASGGLDWSSKQIGQALSVCGIFMLFFQLLVYPRLSKRIGATRSQRWACFLSIPVFLVFPTLSHLRGTERT---LVAASLVLLFLTNAVANTVFINVALATNNAVEPSRRGTLTGLSMTTGSLAKAAGPTFFSSIFAWSIDGR----RRPFPLDYHLAF 604
BLAST of mRNA_L-elsbetiae_contig15061.3632.1 vs. uniprot
Match: D8LJK9_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK9_ECTSI) HSP 1 Score: 165 bits (417), Expect = 5.100e-40 Identity = 129/453 (28.48%), Postives = 202/453 (44.59%), Query Frame = 1 Query: 1 RFLYGLANSINPIARIMTVELLGPENAVI-GIAFVPGSRAIGSIIGPVIGGLFAQPAVFYPSKFSSTGLFARYPFLLPNLAVALVAFLSLPFVLFVLPETLRLERGGVGNDKGAAVENRSIDPSGLAELDALGLEDDGSSIAMLALTEGMRAPPAHDRSARDLCCDREAPIAGTSLAAAKPRSRISSSXXXXXXXXXXXASEGGKGNRMDLEEGNTKAPLLDKRGHRRKSSNYSGEEDGGEDSPRHQRQPTRAAEGNQSSLCGPGGLLSPRRVRVLLLLFCLVTMMEIGFAQMYPLWLLASKDTGGLEWSVPKIGKVLGWAGVGIMLFQFAAYPALVRTIGIIRLLRGSGMFCALLFLALPDVQRLASSENASYVLGVAAVVLVGSCTSVAETAMSLASANAVPVKMRGKVGGIFAVSGSLGRVIGPAALSSLLAWSLHARSSSDRHNRLVDY 1356 RF+ G+ N I P R E+ G + V+ +A++ G+RA + G +GGL QP YPS FS+TGLF R+PFLLPNL VA L LP V+ +PET E+ +RS +P H AR +GGK LE+G+ A + + N SG ++ H R+P + + LCGPGGLLS RV+ LL L C+V + GF +++PLW L++ GGL+W +IGKVL +G +++ Q +P++++ +G + +R + FLA P+ + + + + VA+V + C + A+++AS + VP ++RGK+ G++ + S GR L AWS+ + + +R V Y Sbjct: 68 RFVLGIMNGITPAVRTTVYEVCGTNSHVVQAMAYIDGARASTIVFGSAMGGLLVQPVDHYPSVFSATGLFGRFPFLLPNLVGMGVALLLLPTVIAYVPETKDFEK----------TRSRSXXXXXXXXX---------XXXXXXXXXXXXXSPARHRAVARH-------------------------------------PPQGGKLAYRSLEDGDVSAQ---QEAQETRGVNDSGGRAKHKEGGLHAREPPVTSNREEQGLCGPGGLLSVPRVKPLLFLVCVVQSLLAGFEEVFPLWALSTVGVGGLDWGTMEIGKVLFLSGCIMVVAQVFIFPSVIKILGAVTWMRTGCLLGICTFLATPNAKLFSWNHTTLFAALVASVTVANCCLAAVGIALAVASTSIVPSRLRGKLSGLYGTAESFGRFASAVGSGVLFAWSISSDNPDWVDHRFVFY 461
BLAST of mRNA_L-elsbetiae_contig15061.3632.1 vs. uniprot
Match: D8LP17_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP17_ECTSI) HSP 1 Score: 132 bits (333), Expect = 1.200e-29 Identity = 109/326 (33.44%), Postives = 160/326 (49.08%), Query Frame = 1 Query: 1 RFLYGLANSINPIARIMTVELLGPENAVIGIAFVPGSRAIGSIIGPVIGGLFAQPAVFYPSKFSSTGLFARYPFLLPNLAVALVAFLSLPFVLFVLPETL-----------RLERGGVGNDKGAAVENRSIDPSGLAELDALGLEDDGSSIAMLALTEGMRAPPAHDRSARDLCCDREAPIAGTSLAAAKPRSRISSSXXXXXXXXXXXASEGGKGNRMDLEEGNTKAPLLDKRGHRRKSSNYSGEEDGGEDSPRHQRQPTRAAEGNQSSLCGPGGLLSPRRVRVLLLLFCLVTMMEIGFAQMYPLWLLASKDTGGLEWSVPKIGK 945 RF+ GL N I P R +T E+ GPE+ V G+ ++ GS+ +G ++G IGGL AQPA YP FS+TG+FARYPFLLPNL A A + L V+ LPET R E N +V R + S ++L+ L+D+ A +E ++ ++ RS + D +P GT L R R++++ + D E G P + N E GED P P+RA E + +C GGLLS V++++ + + M IGF ++YPLW +++ D GGL W+ +IGK Sbjct: 120 RFVLGLTNGIMPAVRTLTREVCGPEHVVSGMNYIAGSKGVGLVMGTAIGGLLAQPASTYPGVFSATGVFARYPFLLPNLVGAGFALVMLALVIVFLPETRTSNKADARAAPRREAFPAAN--AISVAGRKLRKSSRSQLEYKPLKDNEE-----ADSEQRKSAVSNYRSTKYR--DAASPT-GTELVLQGKRGRMATNRYEPL--------------KDDGERGIQNDP----------TDNSCPGEGEGEDVPG----PSRAEE-IEPGMCEAGGLLSTPNVKMVIFIAAMAQMSSIGFDEVYPLWAVSTTDVGGLGWAPVQIGK 406
BLAST of mRNA_L-elsbetiae_contig15061.3632.1 vs. uniprot
Match: A0A6H5JH24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH24_9PHAE) HSP 1 Score: 129 bits (325), Expect = 1.420e-28 Identity = 87/252 (34.52%), Postives = 142/252 (56.35%), Query Frame = 1 Query: 766 NQSSLCGPGGLLSPRRVRVLLLLFCLVTMMEIGFAQMYPLWLLASKDTGGLEWSVPKIGKVLGWAGVGIMLFQFAAYPALVRTIGIIRLLR-GSGMFCALLFLALPDVQRLASSENASYVLGVAAVVLVGSCTSVAETAMSLASANAVPVKMRGKVGGIFAVSGSLGRVIGPAALSSLLAWSLHARSSSDRHNRLVDYHAVFVVEMVLMVVVVLLGRKALTLESLT------IPIEHRHGAEYE-PVLQWSG 1497 ++ SL GPGGLL+ R V+++L L C+ + IGF ++YPL+ L++ GGL W+ +IG+VL AG+ + + QF +P+ ++ +GI R G G+ A FLA+P + + ++ + L V A L+ A+SL S VP +MRGK+GG++ + SLGR GP ++ AWS+ + S+ + VDYH VF + + +VVV ++ + LT+E+L ++ H + P WSG Sbjct: 153 DEQSLFGPGGLLARRHVKLVLFLGCISATLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVLVMAGLMLAVCQFVLFPSFIKMVGITSFQRLGCGVGVAT-FLAVPGLTSIGWDYDSLFSLSVVANNLILCSLGSITLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSV-SPSTLEAFGGWVDYHFVFYLSALALVVVGVMAWRTLTVENLMSEEFDRADVDVAHPTDKTVPSSSWSG 402
BLAST of mRNA_L-elsbetiae_contig15061.3632.1 vs. uniprot
Match: A0A6H5KX19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX19_9PHAE) HSP 1 Score: 107 bits (267), Expect = 2.200e-20 Identity = 61/149 (40.94%), Postives = 86/149 (57.72%), Query Frame = 1 Query: 1 RFLYGLANSINPIARIMTVELLGPENAVIGIAFVPGSRAIGSIIGPVIGGLFAQPAVFYPSKFSSTGLFARYPFLLPNLAVALVAFLSLPFVLFVLPETLRLERGGVGNDKGAAVENRSI-DPSGLAELDALGLEDD-GSSIAMLALTE 441 RFL G N++ I++ M E+ G ++ +G+ +V G + G +IGP GGL AQPA YP+ FS +GLF RYP+LLPN+ A +AF LP V F L ETL L+ G D + + +PS L E G+E+ G + M LT+ Sbjct: 177 RFLLGAMNALMGISKCMISEICGKQHETVGMGYVTGCSSFGLVIGPAFGGLLAQPATHYPNVFSESGLFGRYPYLLPNVVGASIAFSGLPMVFFFLKETLNLDDGRSVTDSRVGFDLVATPEPSTLLETQDSGMEEGRGGQLEMAPLTQ 325
BLAST of mRNA_L-elsbetiae_contig15061.3632.1 vs. uniprot
Match: D8LRH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH7_ECTSI) HSP 1 Score: 103 bits (258), Expect = 2.740e-19 Identity = 59/149 (39.60%), Postives = 84/149 (56.38%), Query Frame = 1 Query: 1 RFLYGLANSINPIARIMTVELLGPENAVIGIAFVPGSRAIGSIIGPVIGGLFAQPAVFYPSKFSSTGLFARYPFLLPNLAVALVAFLSLPFVLFVLPETLRLERGGVGNDKGAAVEN-RSIDPSGLAELDALGLEDD-GSSIAMLALTE 441 RFL G N + I++ M E+ G ++ +G+ ++ G + G +IGP GGL AQPA YP+ FS +GLF RYP+LLPN+ A +AF LP V F L ET L G D A + + +PS L E G+E+ G + + LT+ Sbjct: 109 RFLLGAMNGLIAISKCMISEICGKQHETVGMGYITGCWSFGLVIGPAFGGLLAQPATHYPNVFSESGLFGRYPYLLPNVVGASIAFSGLPMVFFFLKETTNLGDGRSVTDTRAGFDPVATSEPSPLLETQETGMEEGRGGQLELTPLTQ 257
BLAST of mRNA_L-elsbetiae_contig15061.3632.1 vs. uniprot
Match: A0A6H5L4Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q8_9PHAE) HSP 1 Score: 100 bits (250), Expect = 1.310e-18 Identity = 62/154 (40.26%), Postives = 85/154 (55.19%), Query Frame = 1 Query: 1 RFLYGLANSINPIARIMTVELLGPENAVIGIAFVPGSRAIGSIIGPVIGGLFAQPAVFYPSKFSSTGLFARYPFLLPNLAVALVAFLSLPFVLFVLPETLRLERGG------VGNDKGAAVENRSIDPSGLAELDALGLEDD-GSSIAMLALTE 441 RFL G N + I++ M E+ G ++ +G+ +V G + G +IGP GGL AQPA YP+ FS +GL+ RYP+LLPN+ A +AF LP V F L ET L+ G VG D A E PS L E G+E+ G + + LT+ Sbjct: 141 RFLLGAMNGLIAISKCMISEICGKQHEKVGMGYVTGCWSFGLVIGPAFGGLLAQPATHYPNVFSESGLYGRYPYLLPNVVGASIAFSGLPMVFFFLKETTNLDDGRSVTQSRVGFDPVATSE-----PSTLLETQDSGMEEGRGGQLELTPLTQ 289 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15061.3632.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15061.3632.1 >prot_L-elsbetiae_contig15061.3632.1 ID=prot_L-elsbetiae_contig15061.3632.1|Name=mRNA_L-elsbetiae_contig15061.3632.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=488bp MTVELLGPENAVIGIAFVPGSRAIGSIIGPVIGGLFAQPAVFYPSKFSSTback to top mRNA from alignment at L-elsbetiae_contig15061:335..4264+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15061.3632.1 ID=mRNA_L-elsbetiae_contig15061.3632.1|Name=mRNA_L-elsbetiae_contig15061.3632.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3930bp|location=Sequence derived from alignment at L-elsbetiae_contig15061:335..4264+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15061:335..4264+ >mRNA_L-elsbetiae_contig15061.3632.1 ID=mRNA_L-elsbetiae_contig15061.3632.1|Name=mRNA_L-elsbetiae_contig15061.3632.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2928bp|location=Sequence derived from alignment at L-elsbetiae_contig15061:335..4264+ (Laminarionema elsbetiae ELsaHSoW15)back to top |