mRNA_L-elsbetiae_contig1506.3631.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1506.3631.1
Unique NamemRNA_L-elsbetiae_contig1506.3631.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1506.3631.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1506contigL-elsbetiae_contig1506:23787..25644 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Exons2
Model size414
Cds size411
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815611.0918777-CDS-L-elsbetiae_contig1506:23788..239841622815611.0918777-CDS-L-elsbetiae_contig1506:23788..23984Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1506 23789..23984 -
1691682990.1405377-CDS-L-elsbetiae_contig1506:23788..239841691682990.1405377-CDS-L-elsbetiae_contig1506:23788..23984Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1506 23789..23984 -
1622815611.1058416-CDS-L-elsbetiae_contig1506:25429..256441622815611.1058416-CDS-L-elsbetiae_contig1506:25429..25644Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1506 25430..25644 -
1691682990.1522045-CDS-L-elsbetiae_contig1506:25429..256441691682990.1522045-CDS-L-elsbetiae_contig1506:25429..25644Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1506 25430..25644 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1506.3631.1prot_L-elsbetiae_contig1506.3631.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1506 23789..25644 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1506.3631.1

>prot_L-elsbetiae_contig1506.3631.1 ID=prot_L-elsbetiae_contig1506.3631.1|Name=mRNA_L-elsbetiae_contig1506.3631.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=137bp
SRRWCPLPRPPRRPRGLGRRSPTPSWRGRSLTPLPGGLRRWGRRRVGWGR
GRCLAVGSPARGRRRSATSRRRTKRVRRRVWLPRLSFPPPAQKPLLVSYR
HGNTFEIAGAPRHDRSESGACLPGPTATCVPWMGATR
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mRNA from alignment at L-elsbetiae_contig1506:23787..25644-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1506.3631.1 ID=mRNA_L-elsbetiae_contig1506.3631.1|Name=mRNA_L-elsbetiae_contig1506.3631.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1858bp|location=Sequence derived from alignment at L-elsbetiae_contig1506:23787..25644- (Laminarionema elsbetiae ELsaHSoW15)
AGCAGGCGGTGGTGCCCGCTACCGCGGCCGCCGCGGAGGCCGCGCGGGCT
CGGGCGGCGGTCACCAACGCCCTCCTGGCGGGGGCGAAGCCTGACACCGT
TGCCGGGGGGGCTGCGCCGGTGGGGGCGGCGGCGGGTGGGGTGGGGGCGG
GGGCGATGCCTTGCGGTAGGGTCACCAGCCCGAGGCCGGCGCCGCAGCGC
AACTTCAAGGCGAAGGTTAGTAAAGAGAGGAGCACAGTAGTCAGTAGCAG
CAGGGGCGGTGTGCTAGGATTGGTTGTGCGGTTGGTGGGAGTAGCAGCGG
CGGTGATGTGATTGGTTGTGCGTTTGGTTGGTGGGTGACCCGGCAGCGCT
TGTGCTGTTTAAGGTTTTTGTCTCTTGGTGGCTTTTGATGCACCGCCACT
TTTGGGTAAGGCATACGCTCGCGATAAAAAACACCACAGGCAGGCGCACC
GCAGGTGGGGGGGGGCTTCTTCGTGACCCTGGTTGGGTCGTCTAGCCAGT
CGTGATGGAGGAAGGGTGCCAGTGGGGCAGACGACGAATAAGCCAATAAT
GAGAAAAAAAGAAGAAAACAAAAGCAAGCATGCAAAGTTTATTTTGTAGC
AAGGACGGCAGCAAGGCAAGTGTGCCTGTCCGCAGCGACGGTATATTTAG
TGGCAAGAATAATAATGGGTCTGGAGCACACGAAGTCTTGTCTAGCCCAT
TCTACCTATGTTTCTAGGTGGGGTTTTCCCCTCTGTGTTTGAGGGCGTTC
CCGATGAAGATGGTAGTGCTGCTGGTTTTGCGGCAAGGGGGGCTGATCGT
ACCTACGTATCTTGTGGGTGTGCTCGTGCGCTGTGGGTGTGCTACTGGTC
CCGAGCCTTCTTCGGCTGCACGAGCGCTGGTAGCATCATCGCATCGTCGT
TGTTTCCATGTCCTCTGGTCGTCAAGTTGGTCATCTTCGGGCCGAGGTTC
TGCGTCGTTTGTTGGGTGCAGGAAACAAGTGCACACGCACACACACACAC
ACACACAGGGAGTTTTGGTGTACCTCTCACTTCCTGCGTGTGTTTCTTAG
GATATTTTGATGGCTCCAGCACTTTTGTGACCACGAGCCTCGAGCTGCTA
TGTAGATTTTTTGGGATTACAGTAGCAATCTCGATTTTACGAGCTATACT
ACGAAGAAACAGCCTCAACAACAACAGCAACGACAGACACACGCAAAGAA
AGGAGAGAGAGGTACGTGGAGTCAGCCGCTCTCTTCGGACCCAACCACTT
GTGGCAGGGTAGGCTACTAGATGTTAACTTTTATGCTCCTGCACTGCAGC
CGTCGTCATCAGCACTCAGGCCGGACGGGGTGTGCAAAGAAAGTGTGAAC
ATCGCCAGAAAGCTCGATGGCAAGAGAGCCCTGTTATCTTTGCCGCGGGC
GGGCAGGCAGGCAGGCAGACAAAGTGGCCTAGCTAGGCTTGCGTTTTAGC
TGCCCTGCCCCCGAGTGCTTTAACCGCGGTTTTACGTCCAGGATCTATCT
ATCGCTTCTTCGGTTTCGTTTCCGCCTATACGATACATACATAAAATACG
TTCTCCCTGCTCTCCCCCCCTAACTAACGCATGCATGGCCCTCTCTTGTC
TGTTTTACTCCGTGTTCGTTTCGAAACGCCTCTGCCGGTTTTCCACTTCG
CGTTCACCAGAACTAAAAGGGTGCGGCGGCGAGTGTGGCTTCCTCGGCTC
TCGTTTCCCCCCCCTGCGCAAAAGCCGCTACTGGTTTCGTACCGACACGG
AAACACTTTTGAGATCGCAGGCGCGCCGCGGCATGATAGGAGTGAAAGCG
GGGCCTGCTTGCCCGGACCGACTGCGACCTGTGTTCCGTGGATGGGCGCG
ACGCGGGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1506:23787..25644-

>mRNA_L-elsbetiae_contig1506.3631.1 ID=mRNA_L-elsbetiae_contig1506.3631.1|Name=mRNA_L-elsbetiae_contig1506.3631.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=822bp|location=Sequence derived from alignment at L-elsbetiae_contig1506:23787..25644- (Laminarionema elsbetiae ELsaHSoW15)
AGCAGGCGGTGGTGCCCGCTACCGCGGCCGCCGCGGAGGCCGCGCGGGCT
CGGGCGGCGGTCACCAACGCCCTCCTGGCGGGGGCGAAGCCTGACACCGT
TGCCGGGGGGGCTGCGCCGGTGGGGGCGGCGGCGGGTGGGGTGGGGGCGG
GGGCGATGCCTTGCGGTAGGGTCACCAGCCCGAGGCCGGCGCCGCAGCGC
AACTTCAAGGCGAAGAGCAGGCGGTGGTGCCCGCTACCGCGGCCGCCGCG
GAGGCCGCGCGGGCTCGGGCGGCGGTCACCAACGCCCTCCTGGCGGGGGC
GAAGCCTGACACCGTTGCCGGGGGGGCTGCGCCGGTGGGGGCGGCGGCGG
GTGGGGTGGGGGCGGGGGCGATGCCTTGCGGTAGGGTCACCAGCCCGAGG
CCGGCGCCGCAGCGCAACTTCAAGGCGAAGAACTAAAAGGGTGCGGCGGC
GAGTGTGGCTTCCTCGGCTCTCGTTTCCCCCCCCTGCGCAAAAGCCGCTA
CTGGTTTCGTACCGACACGGAAACACTTTTGAGATCGCAGGCGCGCCGCG
GCATGATAGGAGTGAAAGCGGGGCCTGCTTGCCCGGACCGACTGCGACCT
GTGTTCCGTGGATGGGCGCGACGCGGAACTAAAAGGGTGCGGCGGCGAGT
GTGGCTTCCTCGGCTCTCGTTTCCCCCCCCTGCGCAAAAGCCGCTACTGG
TTTCGTACCGACACGGAAACACTTTTGAGATCGCAGGCGCGCCGCGGCAT
GATAGGAGTGAAAGCGGGGCCTGCTTGCCCGGACCGACTGCGACCTGTGT
TCCGTGGATGGGCGCGACGCGG
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