mRNA_L-elsbetiae_contig15051.3626.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig15051.3626.1
Unique NamemRNA_L-elsbetiae_contig15051.3626.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig15051.3626.1 vs. uniprot
Match: D8LJ75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ75_ECTSI)

HSP 1 Score: 368 bits (944), Expect = 5.030e-125
Identity = 189/198 (95.45%), Postives = 192/198 (96.97%), Query Frame = 1 
Query:    1 MFDNVEVPVQTVSGDGSYTAVLVVPTGIGAAIGGYAGDALPVARAMSSVVDNLVTHPNVMNGAMLSWPQPGMQYVEGYALDEFCAGRWGLLPVAKGGHRIGLVLDCAIEDDLRLRHVQAANAARATLGINVAEYCVTEKPAGVTLEMTTGGASWGTVKGLDSLVAAGRRLVEEAGCTAIAVVARFPDDEDEEALQAYR 594
            MFDNV  PVQTVSGDGSYTAVLVVPTGIGAAIGGYAGDALPVARA+SSVVD LVTHPNVMNGAMLSWPQ G+QYVEGYALDEFCAGRWGLLPV KGGHRIGLVLDCAIEDDL+LRHVQAANAARATLGINVAEYCVTEKPAGVTLEMTTGGASWGTVKGLDSLV AGRRLVEEAGCTAIAVVARFPDDEDEEALQAYR
Sbjct:    1 MFDNV--PVQTVSGDGSYTAVLVVPTGIGAAIGGYAGDALPVARAVSSVVDTLVTHPNVMNGAMLSWPQAGIQYVEGYALDEFCAGRWGLLPVTKGGHRIGLVLDCAIEDDLQLRHVQAANAARATLGINVAEYCVTEKPAGVTLEMTTGGASWGTVKGLDSLVDAGRRLVEEAGCTAIAVVARFPDDEDEEALQAYR 196
[Close]
BLAST of mRNA_L-elsbetiae_contig15051.3626.1 vs. uniprot
Match: A0A6H5JF81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF81_9PHAE)

HSP 1 Score: 365 bits (938), Expect = 1.110e-122
Identity = 187/198 (94.44%), Postives = 192/198 (96.97%), Query Frame = 1 
Query:    1 MFDNVEVPVQTVSGDGSYTAVLVVPTGIGAAIGGYAGDALPVARAMSSVVDNLVTHPNVMNGAMLSWPQPGMQYVEGYALDEFCAGRWGLLPVAKGGHRIGLVLDCAIEDDLRLRHVQAANAARATLGINVAEYCVTEKPAGVTLEMTTGGASWGTVKGLDSLVAAGRRLVEEAGCTAIAVVARFPDDEDEEALQAYR 594
            MFDNV  PVQTVSGDGSYTAVLVVPTGIGAAIGGYAGDALPVARA+SSVVD LVTHPNVMNGAMLSWPQ G+QYVEGYALDEFCAGRWGLLPV KGGHRIGLVLDCAIEDDL+LRH+QAANAARATLGINVAEYCVTEKPAGVTLEMTTGGASWGTVKGLDSLV AGRRLVEE+GCTAIAVVARFPDDEDEEALQAYR
Sbjct:  104 MFDNV--PVQTVSGDGSYTAVLVVPTGIGAAIGGYAGDALPVARAVSSVVDTLVTHPNVMNGAMLSWPQTGIQYVEGYALDEFCAGRWGLLPVTKGGHRIGLVLDCAIEDDLQLRHLQAANAARATLGINVAEYCVTEKPAGVTLEMTTGGASWGTVKGLDSLVNAGRRLVEESGCTAIAVVARFPDDEDEEALQAYR 299
[Close]
BLAST of mRNA_L-elsbetiae_contig15051.3626.1 vs. uniprot
Match: A0A835ZBV7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBV7_9STRA)

HSP 1 Score: 295 bits (754), Expect = 5.610e-97
Identity = 147/181 (81.22%), Postives = 161/181 (88.95%), Query Frame = 1 
Query:   52 YTAVLVVPTGIGAAIGGYAGDALPVARAMSSVVDNLVTHPNVMNGAMLSWPQPGMQYVEGYALDEFCAGRWGLLPVAKGGHRIGLVLDCAIEDDLRLRHVQAANAARATLGINVAEYCVTEKPAGVTLEMTTGGASWGTVKGLDSLVAAGRRLVEEAGCTAIAVVARFPDDEDEEALQAYR 594
            YTAVLVVPTGIGAAIGGYAGDALPVAR ++SVVD+LVTHPNVMNGA L WP+P M Y EG+ LDEFCAGRWGLLPV  GG+RIGLVLDCA+EDD++LRH+QAANAARATLGINVAEY VTE+P GVTL MT  GASWGTV    ++VAA RRLVEEAGCTAIAVVARFPDDEDE+ LQAYR
Sbjct:    4 YTAVLVVPTGIGAAIGGYAGDALPVARVVASVVDHLVTHPNVMNGAALYWPEPNMLYAEGFVLDEFCAGRWGLLPVTHGGNRIGLVLDCAMEDDMQLRHLQAANAARATLGINVAEYAVTEEPIGVTLAMTESGASWGTVGNAGTVVAAARRLVEEAGCTAIAVVARFPDDEDEDMLQAYR 184
[Close]
BLAST of mRNA_L-elsbetiae_contig15051.3626.1 vs. uniprot
Match: A0A7S3Y7S8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7S8_HETAK)

HSP 1 Score: 252 bits (644), Expect = 2.320e-79
Identity = 124/181 (68.51%), Postives = 146/181 (80.66%), Query Frame = 1 
Query:   52 YTAVLVVPTGIGAAIGGYAGDALPVARAMSSVVDNLVTHPNVMNGAMLSWPQPGMQYVEGYALDEFCAGRWGLLPVAKGGHRIGLVLDCAIEDDLRLRHVQAANAARATLGINVAEYCVTEKPAGVTLEMTTGGASWGTVKGLDSLVAAGRRLVEEAGCTAIAVVARFPDDEDEEALQAYR 594
            YT  L+VPTGIGA+IGGYAGDALPVARA +SV D ++THPNVMNGA L WPQ  + YVEGYALDE   G WGLLPV +G +RIGL+LD A+++D+RLRHVQAA AARATLG++VAEY VT+ P GVTL M+ GGASWG V    +++   RRLVEE GCTAIA+VARFP+DED   LQAYR
Sbjct:   77 YTVALIVPTGIGASIGGYAGDALPVARAFASVADTVLTHPNVMNGASLYWPQDNILYVEGYALDEVAKGNWGLLPVVRGSNRIGLLLDAAMDEDMRLRHVQAARAARATLGVDVAEYAVTDAPIGVTLRMSPGGASWGAVDNPGTVLRGARRLVEEGGCTAIALVARFPEDEDPAMLQAYR 257
[Close]
BLAST of mRNA_L-elsbetiae_contig15051.3626.1 vs. uniprot
Match: UPI0002D290FB (DUF3326 domain-containing protein n=1 Tax=Nodosilinea nodulosa TaxID=416001 RepID=UPI0002D290FB)

HSP 1 Score: 236 bits (603), Expect = 6.730e-74
Identity = 124/181 (68.51%), Postives = 143/181 (79.01%), Query Frame = 1 
Query:   52 YTAVLVVPTGIGAAIGGYAGDALPVARAMSSVVDNLVTHPNVMNGAMLSWPQPGMQYVEGYALDEFCAGRWGLLPVAKGGHRIGLVLDCAIEDDLRLRHVQAANAARATLGINVAEYCVTEKPAGVTLEMTTGGASWGTVKGLDSLVAAGRRLVEEAGCTAIAVVARFPDDEDEEALQAYR 594
            YTAVLVVPTGIGAA+GGYAGDALPVARAM+SVVD L+THPNVMNGA L WP P   YVEGY LD+F AGRWGL PV +  +RIGLVLD AIEDDLR RH+QAA+AARATLG+++ +Y VT+ P GV L     GA+WGT++  DSL+ A  R +  AG  AIAVVARFP+D D EALQ YR
Sbjct:   11 YTAVLVVPTGIGAAVGGYAGDALPVARAMASVVDTLITHPNVMNGAQLYWPLPNACYVEGYGLDQFAAGRWGLRPVHR--NRIGLVLDAAIEDDLRWRHLQAADAARATLGLDLTDYAVTDAPLGVELRTAPSGATWGTIQRPDSLLRAAERAIA-AGAEAIAVVARFPEDTDAEALQDYR 188
[Close]
BLAST of mRNA_L-elsbetiae_contig15051.3626.1 vs. uniprot
Match: A0A8J7EAT9_9CYAN (DUF3326 domain-containing protein n=1 Tax=Nodosilinea sp. LEGE 07088 TaxID=2777968 RepID=A0A8J7EAT9_9CYAN)

HSP 1 Score: 236 bits (602), Expect = 7.350e-74
Identity = 123/181 (67.96%), Postives = 143/181 (79.01%), Query Frame = 1 
Query:   52 YTAVLVVPTGIGAAIGGYAGDALPVARAMSSVVDNLVTHPNVMNGAMLSWPQPGMQYVEGYALDEFCAGRWGLLPVAKGGHRIGLVLDCAIEDDLRLRHVQAANAARATLGINVAEYCVTEKPAGVTLEMTTGGASWGTVKGLDSLVAAGRRLVEEAGCTAIAVVARFPDDEDEEALQAYR 594
            YTAVLVVPTGIGAA+GGYAGDALPVARAM++VVD L+THPNVMNGA L WP P   YVEGY+LD+F AGRWGL PV +  +RIGLVLD AIEDDLR RH+QAA+AARATLG+ + +Y VT+ P GV L     GA+WGT++  DSL+ A  R +  AG  AIAVVARFP+D D EALQ YR
Sbjct:   10 YTAVLVVPTGIGAAVGGYAGDALPVARAMAAVVDTLITHPNVMNGAQLYWPLPNAYYVEGYSLDQFAAGRWGLRPVHR--NRIGLVLDAAIEDDLRWRHLQAADAARATLGLALTDYAVTDAPLGVELRTAASGATWGTIQRPDSLLRAAERAIA-AGANAIAVVARFPEDTDAEALQDYR 187
[Close]
BLAST of mRNA_L-elsbetiae_contig15051.3626.1 vs. uniprot
Match: A0A2T2W135_9CYAN (Uncharacterized protein n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A2T2W135_9CYAN)

HSP 1 Score: 236 bits (601), Expect = 1.600e-73
Identity = 126/189 (66.67%), Postives = 145/189 (76.72%), Query Frame = 1 
Query:   28 QTVSGDGSYTAVLVVPTGIGAAIGGYAGDALPVARAMSSVVDNLVTHPNVMNGAMLSWPQPGMQYVEGYALDEFCAGRWGLLPVAKGGHRIGLVLDCAIEDDLRLRHVQAANAARATLGINVAEYCVTEKPAGVTLEMTTGGASWGTVKGLDSLVAAGRRLVEEAGCTAIAVVARFPDDEDEEALQAYR 594
            Q V G   YTAVLVVPTGIGAA+GGYAGDALPVARA++SVVDNL+THPNVMNGA L WP P   YVEGY LD+F AGRWGL PV +  +RIGLVLD AIED+LR RH+QAA+AARATLG+++ +Y VT+ P  V L     GA+WGT+   DSL+ A  R +  AG  AIAVVARFPDD D EALQ YR
Sbjct:    3 QAVPGRRPYTAVLVVPTGIGAAVGGYAGDALPVARAIASVVDNLITHPNVMNGAQLYWPLPNAYYVEGYGLDQFAAGRWGLAPVHR--NRIGLVLDAAIEDNLRWRHLQAADAARATLGLDLTDYVVTDAPLEVELRSAESGATWGTIGRPDSLLRAAERAIA-AGAEAIAVVARFPDDTDAEALQDYR 188
[Close]
BLAST of mRNA_L-elsbetiae_contig15051.3626.1 vs. uniprot
Match: A0A1U7J6C0_9CYAN (Uncharacterized protein n=6 Tax=Cyanobacteria/Melainabacteria group TaxID=1798711 RepID=A0A1U7J6C0_9CYAN)

HSP 1 Score: 234 bits (596), Expect = 6.430e-73
Identity = 122/181 (67.40%), Postives = 142/181 (78.45%), Query Frame = 1 
Query:   52 YTAVLVVPTGIGAAIGGYAGDALPVARAMSSVVDNLVTHPNVMNGAMLSWPQPGMQYVEGYALDEFCAGRWGLLPVAKGGHRIGLVLDCAIEDDLRLRHVQAANAARATLGINVAEYCVTEKPAGVTLEMTTGGASWGTVKGLDSLVAAGRRLVEEAGCTAIAVVARFPDDEDEEALQAYR 594
            YTAVLVVPTGIGAA+GGYAGDALPVARA++SVVD L+THPNVMNGA L WP P   YVEGY LD+F AGRWGL PV +  +RIGLVLD AIEDDLR RH+QAA+AARATLG+++ +Y VT+ P GV L     GA+WGT++  DSL+ A  R +  AG  AIAVVARFP+D D E LQ YR
Sbjct:    9 YTAVLVVPTGIGAAVGGYAGDALPVARAIASVVDTLITHPNVMNGAQLYWPLPNACYVEGYGLDQFAAGRWGLRPVHR--NRIGLVLDAAIEDDLRWRHLQAADAARATLGLDLTDYIVTDAPLGVELRRAASGATWGTIERPDSLLRAAERAIA-AGANAIAVVARFPEDTDAETLQDYR 186
[Close]
BLAST of mRNA_L-elsbetiae_contig15051.3626.1 vs. uniprot
Match: UPI001689625F (DUF3326 domain-containing protein n=1 Tax=Microcoleus sp. FACHB-1515 TaxID=2692821 RepID=UPI001689625F)

HSP 1 Score: 232 bits (592), Expect = 1.880e-72
Identity = 119/181 (65.75%), Postives = 141/181 (77.90%), Query Frame = 1 
Query:   52 YTAVLVVPTGIGAAIGGYAGDALPVARAMSSVVDNLVTHPNVMNGAMLSWPQPGMQYVEGYALDEFCAGRWGLLPVAKGGHRIGLVLDCAIEDDLRLRHVQAANAARATLGINVAEYCVTEKPAGVTLEMTTGGASWGTVKGLDSLVAAGRRLVEEAGCTAIAVVARFPDDEDEEALQAYR 594
            YTAVLVVPTGIGAAIGGYAGDA+PV RAMS  VD L+THPNVMNGA L WP P + YVEGY LD+F +GRWGL PV +  +RIGLV+D AIE DLR RH+QAA+AARATLG+++ +Y VT+ P GV L     GA+WGT+   DSL+ A  + + +AG TAIA+VARFPDDE  EALQ YR
Sbjct:    5 YTAVLVVPTGIGAAIGGYAGDAIPVVRAMSGAVDRLITHPNVMNGAQLYWPLPNVLYVEGYGLDQFASGRWGLRPVHQ--NRIGLVIDRAIEPDLRWRHLQAADAARATLGLDLTDYVVTDAPLGVELRSAQSGATWGTIDRPDSLLRAVEQSITQAGATAIAIVARFPDDEGSEALQHYR 183
[Close]
BLAST of mRNA_L-elsbetiae_contig15051.3626.1 vs. uniprot
Match: A0A8J7JNG5_9CYAN (DUF3326 domain-containing protein n=1 Tax=Nodosilinea sp. LEGE 06152 TaxID=2777966 RepID=A0A8J7JNG5_9CYAN)

HSP 1 Score: 231 bits (589), Expect = 9.430e-72
Identity = 122/181 (67.40%), Postives = 139/181 (76.80%), Query Frame = 1 
Query:   52 YTAVLVVPTGIGAAIGGYAGDALPVARAMSSVVDNLVTHPNVMNGAMLSWPQPGMQYVEGYALDEFCAGRWGLLPVAKGGHRIGLVLDCAIEDDLRLRHVQAANAARATLGINVAEYCVTEKPAGVTLEMTTGGASWGTVKGLDSLVAAGRRLVEEAGCTAIAVVARFPDDEDEEALQAYR 594
            YTAVLVVPTGIGAA+GGYAGDALPVARA++SVVD L+THPNVMNGA L WP P   YVEGY LD+F AGRWGL PV +  +RIGLVLD AIEDDLR RH+QAA+A RATLG+ + +Y VT+ P GV L     GA+WGT+   DSL+ A  R    AG  AIAVVARFPDD D +ALQ YR
Sbjct:   14 YTAVLVVPTGIGAAVGGYAGDALPVARAIASVVDTLITHPNVMNGAQLYWPLPNAYYVEGYGLDQFAAGRWGLRPVHR--NRIGLVLDAAIEDDLRWRHLQAADATRATLGLELTDYVVTDAPLGVELRRAESGATWGTIGRPDSLLRAAERS-RAAGAEAIAVVARFPDDTDADALQDYR 191
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15051.3626.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ75_ECTSI5.030e-12595.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF81_9PHAE1.110e-12294.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZBV7_9STRA5.610e-9781.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3Y7S8_HETAK2.320e-7968.51Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
UPI0002D290FB6.730e-7468.51DUF3326 domain-containing protein n=1 Tax=Nodosili... [more]
A0A8J7EAT9_9CYAN7.350e-7467.96DUF3326 domain-containing protein n=1 Tax=Nodosili... [more]
A0A2T2W135_9CYAN1.600e-7366.67Uncharacterized protein n=3 Tax=Cyanobacteria TaxI... [more]
A0A1U7J6C0_9CYAN6.430e-7367.40Uncharacterized protein n=6 Tax=Cyanobacteria/Mela... [more]
UPI001689625F1.880e-7265.75DUF3326 domain-containing protein n=1 Tax=Microcol... [more]
A0A8J7JNG5_9CYAN9.430e-7267.40DUF3326 domain-containing protein n=1 Tax=Nodosili... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15051contigL-elsbetiae_contig15051:304..3179 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score373.2
Seed ortholog evalue7.6e-101
Seed eggNOG ortholog2880.D8LJ75
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Protein of unknown function (DUF3326)
EggNOG OGs2CNAI@1,2QUTI@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionProtein of unknown function DUF3326
Ec32 orthologEc-02_005040.1
Exons5
Model size621
Cds size621
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15051.3626.1prot_L-elsbetiae_contig15051.3626.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig15051 304..3179 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815610.7820997-CDS-L-elsbetiae_contig15051:303..4001622815610.7820997-CDS-L-elsbetiae_contig15051:303..400Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15051 304..400 -
1691682990.013251-CDS-L-elsbetiae_contig15051:303..4001691682990.013251-CDS-L-elsbetiae_contig15051:303..400Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15051 304..400 -
1622815610.7981768-CDS-L-elsbetiae_contig15051:943..11131622815610.7981768-CDS-L-elsbetiae_contig15051:943..1113Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15051 944..1113 -
1691682990.0254612-CDS-L-elsbetiae_contig15051:943..11131691682990.0254612-CDS-L-elsbetiae_contig15051:943..1113Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15051 944..1113 -
1622815610.8179018-CDS-L-elsbetiae_contig15051:1568..16621622815610.8179018-CDS-L-elsbetiae_contig15051:1568..1662Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15051 1569..1662 -
1691682990.0357816-CDS-L-elsbetiae_contig15051:1568..16621691682990.0357816-CDS-L-elsbetiae_contig15051:1568..1662Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15051 1569..1662 -
1622815610.8366153-CDS-L-elsbetiae_contig15051:2592..27211622815610.8366153-CDS-L-elsbetiae_contig15051:2592..2721Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15051 2593..2721 -
1691682990.0442314-CDS-L-elsbetiae_contig15051:2592..27211691682990.0442314-CDS-L-elsbetiae_contig15051:2592..2721Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15051 2593..2721 -
1622815610.8569455-CDS-L-elsbetiae_contig15051:3048..31791622815610.8569455-CDS-L-elsbetiae_contig15051:3048..3179Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15051 3049..3179 -
1691682990.053699-CDS-L-elsbetiae_contig15051:3048..31791691682990.053699-CDS-L-elsbetiae_contig15051:3048..3179Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15051 3049..3179 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig15051.3626.1

>prot_L-elsbetiae_contig15051.3626.1 ID=prot_L-elsbetiae_contig15051.3626.1|Name=mRNA_L-elsbetiae_contig15051.3626.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=207bp
MFDNVEVPVQTVSGDGSYTAVLVVPTGIGAAIGGYAGDALPVARAMSSVV
DNLVTHPNVMNGAMLSWPQPGMQYVEGYALDEFCAGRWGLLPVAKGGHRI
GLVLDCAIEDDLRLRHVQAANAARATLGINVAEYCVTEKPAGVTLEMTTG
GASWGTVKGLDSLVAAGRRLVEEAGCTAIAVVARFPDDEDEEALQAYRYM
VACCLV*
back to top

mRNA from alignment at L-elsbetiae_contig15051:304..3179-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig15051.3626.1 ID=mRNA_L-elsbetiae_contig15051.3626.1|Name=mRNA_L-elsbetiae_contig15051.3626.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2876bp|location=Sequence derived from alignment at L-elsbetiae_contig15051:304..3179- (Laminarionema elsbetiae ELsaHSoW15)
ATGTTCGACAACGTGGAGGTGCCGGTACAGACCGTGTCCGGCGACGGGAG
TTACACCGCCGTTCTCGTCGTGCCGACCGGTATCGGAGCGGCGATCGGCG
GTTACGCCGGTGATGCTCTTCCTGTGGCACGGTAAGGAAGCACAAAACCA
TCTCACGCGTGTGCGCCGTGTGCCTCCCTCGTGCCTACGGAACCCCCGAA
ACGCGACATCTCCGTCTGTGGCGCCGAATGTGGTCCGACGTACATTGCAT
ACAAGGGGGCCCTGCTTGTAGTTCGTGGCTGCTTCATAAACGAGCTGACA
AACACGTAAAAATCGTTCAACGATTCGGAGAGGTTGAAAAAGTTGCTGTT
GCTGTTGCTGTTGACGTTGCCGTTGCCGTTGCTGTTGCCTCAGATCCGTC
TCCTCGGAGGCTCAGCTGCTGAACGCTGTTGCCGTGCCACTGCTGCTTTT
GAATAAAGGGCCATGTCGTCTGTTGTGGACAACTTGGTCACCCACCCGAA
CGTCATGAACGGCGCGATGCTCAGCTGGCCCCAGCCGGGGATGCAGTACG
TCGAGGGGTACGCTTTGGACGAATTCTGCGCGGGAAGGTGCGTATGGTAC
ACGGTCCTGGTTCGGTCCGGGGGGGGGGGGGGGGGGGGGGGGGCTCTCCG
GGCTTTTTTTTCGCCATCCCTCCCTTGTGTCCCCCGCTGCCGCGGAGTGN
NNNNNNNNNGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGCGAGGTATCTCCGTGCCTATTTATGGCCATCTCT
TCCTTGAGTCTCTCCGTGCGACGTAGATGGATACGTCCAAATGCGGACAT
GCACATTTCCGTCGGCGACAACGAGTCAGTCAGCAGGGTATCTCAGCCAC
CGTTTGTCTTTGGGAACTATGATTTTTTTCAGGTGTCTATCTATGTGTGT
ATTTCGTTTGTACTTTTTCCTTACTTGTACCGTGTGTGTGTATGGCAGGA
CCCTTGTCTTGGTCAGGCATGATGATGTGACTGGGCGTATCGCTTGTCAC
TTTCTCGAGCTTACGACTAACGTGTGAACAGCAATGATGTCACCAAGACA
TCTTTATCATATTTATTTTCATGACCAGCTCCGCCATTCGACTAGTCTAG
TGATGTTCCACAGCATGGACCATCTGCGAAAGCACCGACAACGGCGGACA
GACAGGCTGGCGGCCCGAAAACGAACAAACGTCATTTCTTTAAAAAAACG
TCCCCCCCAACACGACTTCTTTCGTCGCTGGGCATTCACTGAGCACCCAT
CTAAATTCAGCAGGAGAAGGAGAGCACTAATTGGCCATGCCCTGCAGAAA
AAGCCCTTGGGTATATTTCACCGCTTGCATCCTGCCTGGCTCCGAACAAC
CTTCCATGCCATTGGGCGTGCATCTTTTGGTGTTTCTTCTTGCCATTGCC
GCTGCCGGCAAAAAAAGGTGGGGCTTGCTGCCTGTGGCTAAGGGCGGACA
CCGCATCGGCCTGGTCTTGGATTGCGCCATAGAGGACGACTTGAGGCTCA
GACATGTGCAGGTGAGACATCGTATTGTACGGCACGGCACGGTACGGCAC
GGTACGGCACGGTACGGCACGGTACGGCACGGTACGGCACGGTACGGCAC
GGTACGGCACGGTGCGGCACGCCCGAACCGCAGAAAACACACAAAACACG
CAAAAGACGAAAAATGGCAGCGTTTCTCTCGCAGCACCCAGCAGTGCAGT
AGTGCAGTAGTCGCGAAAAGCAGCTGGTGCCCTGTTGGTTCGATTTGATG
ACGGCGAAGTGGGGTGAGCTTTCTTGCCGCTCTCTCAACTTTCCTGCACA
CGTGCAAGCCAGCTTGCCAATCTAAATCGACATCGAACGGCCGACCCACT
CCACCATGAAGCCTACGACAGGTGCATCATCATAAAAGTAGTTGAACACC
ACACGCAATAAAACGAAACCAAAAAGAACCAAAAAGAACCACCAAACCAA
ACCAAACCAAACCCAGGCAGCCAACGCGGCGCGTGCGACGCTCGGCATCA
ATGTGGCGGAGTACTGTGTGACGGAGAAACCGGCGGGGGTGACGCTGGAG
ATGACCACAGGGGGTGCCAGCTGGGGGACGGTTAAGGGGTTGGACTCGCT
CGTGGCCGCGGGCAGAAGGCTGGTGGAGGAGGCGGGGTGAGACGAATCAA
GAATGTATCGTATATTAGTCCCGGCTGATCCGGTTATCAGTGTCGTCGCA
CTTGACGCATCTGTTGAAGCGACAGCGATAGTATTGCAGCTCTTCTGGGG
CAATATCTGGCATGCCCGCGGTTTGACAGGGAATTTTCCCGGAAGTGACT
GAGTGAGCTTTCCGCTTCCTCTTTCATCCTTTCGTTTTGGTGCGGCCGTG
AACGTGGTATCGAGCTATTTCTGCGGTATAGATAAGTATATATACCATCC
CACCTGCCGCAAGTTGATTGACGGAGCATAGTTCGACTCTCTGTCGACGT
GCTTGCACGGAGGTTCGCGGCATCATGATGAGCACGTCGCACGTTACCGC
GCCAGTAGAGGGTGTTCAGGTCGTGAGGGTGCAGCAACGGGAAGCGCTTG
GCCGGTGCCCCTGACGTCGCATCACGCGCCGCACATCGAGACGCTTCCAG
CCCCCGTCTTAACCCCCCCTCACGCTTGTGCCGTCTCTTTGCCCCCGACA
TCCTTGCTATTGTTCTCTCTTTGTCACAGCTGTACGGCGATCGCTGTGGT
GGCGAGATTTCCAGATGACGAGGACGAGGAAGCGTTGCAGGCCTACAGGT
ACATGGTGGCATGCTGTCTTGTGTGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig15051:304..3179-

>mRNA_L-elsbetiae_contig15051.3626.1 ID=mRNA_L-elsbetiae_contig15051.3626.1|Name=mRNA_L-elsbetiae_contig15051.3626.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1242bp|location=Sequence derived from alignment at L-elsbetiae_contig15051:304..3179- (Laminarionema elsbetiae ELsaHSoW15)
ATGTTCGACAACGTGGAGGTGCCGGTACAGACCGTGTCCGGCGACGGGAG
TTACACCGCCGTTCTCGTCGTGCCGACCGGTATCGGAGCGGCGATCGGCG
GTTACGCCGGTGATGCTCTTCCTGTGGCACGATGTTCGACAACGTGGAGG
TGCCGGTACAGACCGTGTCCGGCGACGGGAGTTACACCGCCGTTCTCGTC
GTGCCGACCGGTATCGGAGCGGCGATCGGCGGTTACGCCGGTGATGCTCT
TCCTGTGGCACGGGCCATGTCGTCTGTTGTGGACAACTTGGTCACCCACC
CGAACGTCATGAACGGCGCGATGCTCAGCTGGCCCCAGCCGGGGATGCAG
TACGTCGAGGGGTACGCTTTGGACGAATTCTGCGCGGGAAGGGCCATGTC
GTCTGTTGTGGACAACTTGGTCACCCACCCGAACGTCATGAACGGCGCGA
TGCTCAGCTGGCCCCAGCCGGGGATGCAGTACGTCGAGGGGTACGCTTTG
GACGAATTCTGCGCGGGAAGGTGGGGCTTGCTGCCTGTGGCTAAGGGCGG
ACACCGCATCGGCCTGGTCTTGGATTGCGCCATAGAGGACGACTTGAGGC
TCAGACATGTGCAGGTGGGGCTTGCTGCCTGTGGCTAAGGGCGGACACCG
CATCGGCCTGGTCTTGGATTGCGCCATAGAGGACGACTTGAGGCTCAGAC
ATGTGCAGGCAGCCAACGCGGCGCGTGCGACGCTCGGCATCAATGTGGCG
GAGTACTGTGTGACGGAGAAACCGGCGGGGGTGACGCTGGAGATGACCAC
AGGGGGTGCCAGCTGGGGGACGGTTAAGGGGTTGGACTCGCTCGTGGCCG
CGGGCAGAAGGCTGGTGGAGGAGGCGGGGCAGCCAACGCGGCGCGTGCGA
CGCTCGGCATCAATGTGGCGGAGTACTGTGTGACGGAGAAACCGGCGGGG
GTGACGCTGGAGATGACCACAGGGGGTGCCAGCTGGGGGACGGTTAAGGG
GTTGGACTCGCTCGTGGCCGCGGGCAGAAGGCTGGTGGAGGAGGCGGGCT
GTACGGCGATCGCTGTGGTGGCGAGATTTCCAGATGACGAGGACGAGGAA
GCGTTGCAGGCCTACAGGTACATGGTGGCATGCTGTCTTGTGTGACTGTA
CGGCGATCGCTGTGGTGGCGAGATTTCCAGATGACGAGGACGAGGAAGCG
TTGCAGGCCTACAGGTACATGGTGGCATGCTGTCTTGTGTGA
back to top