mRNA_L-elsbetiae_contig1504.3622.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1504.3622.1 vs. uniprot
Match: A0A6H5KBQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBQ8_9PHAE) HSP 1 Score: 574 bits (1479), Expect = 7.880e-198 Identity = 307/440 (69.77%), Postives = 329/440 (74.77%), Query Frame = 1 Query: 1 GEREEADSRDELIGIFVPALDPAEGGRGGARPAPLLLADRKVNDGDDYEMRPDMSRSSXXXXXXXXXXXXXXXXXXXXXXMHHRALSSTCLEGLE--PAKYHHRRERSGS----LLDPPRSREYST-DHSTDLLDCSGAPSDREHSSSLYRQYSNEASAPPPQVLQGWKRNCVALDKRSWLEVRDKQHRYGKNLRLYFKEWDRRGKPGGSFFKWLSTPEVQLDGCPRHELESDVVHYCRPEERDNYALSLKVTTEGQAMLYTAGGKPVNCGPNAWLFVLRDHTIFATDKKTDPPRFHHSSFFGGGYVEAAGMLVAEQGVLKTLFPHSGHYRPTNQHLQGLLKFLRGLGVDLSALQVDAQRVHKVARPDKRTCYPRVRKMDNPFMVSALYLLNFFEAKYLAWSSSLFDDLHRKVTARHERLHQXXXXXXSPEGAAPSNFRF 1299 GE EE D IGIFVPALD GR G P+ DD +MR S + RALSS CLEGL+ HHRRERSGS DPPRS + D+STDLL CSGAPSDREHSS+LY QYSNEASAPPPQVLQGWK NCVALDKRSWLEVRDKQHRYGKNLRLYFKEWDRRGKPGGSFFKWLS EVQL+GCPRHELESDVVHYCRPEER NYAL L VT EG+A+L+TA G+PVNCGP+AWLFVLRD T+FAT KKTDPPRFHHSSFFGGGYVEAAGMLVAE+GVLKTL+PHSGHYRPTNQHL+ LLKFL GLGVDL AL+VDAQRVHKVARPDKR YPRVRKMDNPFMVSA YLL+FFEAKYLAWSS FD+L+ KV RHERLHQ P+ FRF Sbjct: 152 GEGEEDDVAP--IGIFVPALDRGATGRRGLGPSFA----------DDADMRQRGCGDSAGGSSCTRRIG------------YFRALSSQCLEGLDWGDTGAHHRRERSGSEPRVSQDPPRSSGFDLLDYSTDLLGCSGAPSDREHSSTLYHQYSNEASAPPPQVLQGWKMNCVALDKRSWLEVRDKQHRYGKNLRLYFKEWDRRGKPGGSFFKWLSAAEVQLEGCPRHELESDVVHYCRPEERHNYALRLDVTPEGRAILHTAQGEPVNCGPSAWLFVLRDQTLFATGKKTDPPRFHHSSFFGGGYVEAAGMLVAEEGVLKTLYPHSGHYRPTNQHLRVLLKFLNGLGVDLDALEVDAQRVHKVARPDKRASYPRVRKMDNPFMVSARYLLDFFEAKYLAWSSCHFDELYLKVNERHERLHQHLPDAELPK------FRF 561
BLAST of mRNA_L-elsbetiae_contig1504.3622.1 vs. uniprot
Match: D8LDY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDY1_ECTSI) HSP 1 Score: 251 bits (641), Expect = 2.440e-78 Identity = 121/147 (82.31%), Postives = 128/147 (87.07%), Query Frame = 1 Query: 325 LLDPPRSREYST-DHSTDLLDCSGAPSDREHSSSLYRQYSNEASAPPPQVLQGWKRNCVALDKRSWLEVRDKQHRYGKNLRLYFKEWDRRGKPGGSFFKWLSTPEVQLDGCPRHELESDVVHYCRPEERDNYALSLKVTTEGQAMLY 762 L DPPRSR + D+STDLL SGAPSDREHSS+LY QYSNEASAPPPQVLQGWK NCVALDKRSWLEVRDKQHRYGKNLRLYFKEWDRRGKPGGSFFKWLS EVQL+GCPRHELESDVVHYCRPEER NYAL L VT + + + Sbjct: 2 LPDPPRSRGFDLLDYSTDLLGFSGAPSDREHSSTLYHQYSNEASAPPPQVLQGWKMNCVALDKRSWLEVRDKQHRYGKNLRLYFKEWDRRGKPGGSFFKWLSAAEVQLEGCPRHELESDVVHYCRPEERHNYALRLDVTPKADQLFF 148
BLAST of mRNA_L-elsbetiae_contig1504.3622.1 vs. uniprot
Match: A0A4D9DCJ4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCJ4_9STRA) HSP 1 Score: 244 bits (622), Expect = 2.320e-72 Identity = 126/265 (47.55%), Postives = 168/265 (63.40%), Query Frame = 1 Query: 430 RQYSNEASAPPPQVLQGW--KRNCVALDKRSWLEVRDKQHRYGKNLRLYFKEWDRRGKPGGSFFKWLSTPEVQLDGCPRHELESDVVHYCRPEERDNYALSLKVTTEGQAMLYTAG-GKPVNCGPNAWLFVLRDHTIFATDKKTD-PPRFHHSSFFGGGYVEAAGMLVAEQGVLKTLFPHSGHYRPTNQHLQGLLKFLRGLGVDLSALQVDAQRVHKVARPDKRTCYPRVRKMDNPFMVSALYLLNFFEAKYLAWSSSLFDDLHR 1212 R+ S + P P + + N +D+R+WLEV D++HRY KNLRLY+KEWDRRG+PG SF+ WL V+L+ C R +LE++ V+YC +D A ++ G AG G V GP+ W+FVLRD ++A +KKTD PPRFHHSSFF G V+AAG+ VA GVL+ L+PHSGHYRP++ HL LL FL VD++ +QVD Q V KVAR T R RK+D+P+M + L+ F AK AW LFD++ R Sbjct: 122 RERSQQLYVPMPAAISRTFGESNNAMIDRRAWLEVEDRKHRYAKNLRLYYKEWDRRGQPGSSFWSWLDEERVELEECSRAQLEAETVYYCS-FTKDREAFEVQFDEHGLLHQGQAGAGDLVETGPDGWIFVLRDGLVYAHEKKTDQPPRFHHSSFFAGECVQAAGLFVATGGVLERLYPHSGHYRPSDSHLLSLLLFLEAQHVDMAVMQVDVQLVMKVARSHDATKGGRRRKIDSPYMWTGLHAKYFLLAKRYAWDKKLFDEMLR 385
BLAST of mRNA_L-elsbetiae_contig1504.3622.1 vs. uniprot
Match: W7U6C7_9STRA (Calmodulin binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6C7_9STRA) HSP 1 Score: 242 bits (617), Expect = 3.340e-70 Identity = 125/265 (47.17%), Postives = 167/265 (63.02%), Query Frame = 1 Query: 430 RQYSNEASAPPPQVLQGW--KRNCVALDKRSWLEVRDKQHRYGKNLRLYFKEWDRRGKPGGSFFKWLSTPEVQLDGCPRHELESDVVHYCRPEERDNYALSLKVTTEGQAMLYTAGGKP-VNCGPNAWLFVLRDHTIFATDKKTD-PPRFHHSSFFGGGYVEAAGMLVAEQGVLKTLFPHSGHYRPTNQHLQGLLKFLRGLGVDLSALQVDAQRVHKVARPDKRTCYPRVRKMDNPFMVSALYLLNFFEAKYLAWSSSLFDDLHR 1212 R+ S + P P + + N +D+R+WLEV D++HRY KNLRLY+KEWDRRG+PG SF+ WL V+L+ C R +LE++ V+YC +D A ++ G AG V GP+ W+FVLRD ++A +KKTD PPRFHHSSFF G V+AAG+ VA GVL+ L+PHSGHYRP++ HL LL FL VD++ +QVD Q V KVAR T R RK+D+P+M + L+ F AK AW LFD++ R Sbjct: 246 RERSQQLYVPMPAAISRTLGENNNAMIDRRAWLEVEDRKHRYAKNLRLYYKEWDRRGQPGSSFWSWLDEERVELEECSRAQLEAETVYYCS-FTKDREAFEVQFDEHGLLHQRQAGAWDLVETGPDGWIFVLRDGLVYAHEKKTDQPPRFHHSSFFAGECVQAAGLFVATGGVLERLYPHSGHYRPSDSHLLSLLLFLEAQHVDMALMQVDVQLVMKVARSHDATKGGRRRKIDSPYMWTGLHAKYFLLAKRYAWDKKLFDEMLR 509
BLAST of mRNA_L-elsbetiae_contig1504.3622.1 vs. uniprot
Match: A0A7S2SKQ1_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKQ1_9STRA) HSP 1 Score: 238 bits (607), Expect = 7.980e-68 Identity = 117/256 (45.70%), Postives = 163/256 (63.67%), Query Frame = 1 Query: 457 PPPQVLQGWKRNCVALDKRSWLEVRDKQHRYGKNLRLYFKEWDRRGKPGGSFFKWLSTPEVQLDGCPRHELESDVVHYCRPEERDNYALSLKVTTEGQAMLYTAGGK-PVNCGPNAWLFVLRDHTIFATDKKTDPPRFHHSSFFGGGYVEAAGMLVAEQGVLKTLFPHSGHYRPTNQHLQGLLKFLRGLGVDLSALQVDAQRVHKVARPDKRTCYPRVRKMDNPFMVSALYLLNFFEAKYLAWSSSLFDDLHRKVT 1221 PP +V +G + LD+R+WLEV D +HRY K+LR Y++ WD +PG F WL T +LD CPR LE+D VHYC EER+ YA+ + EG + + G + PV+ G W+FV+RD ++A +K+T+PPRFHHSSFF G VE AG+ VA G + +FPHSGHYRP + + LLKFL +DLS+++VDAQ KVAR +R +++K D P + LL+F E K+ AWS+ LF++L + T Sbjct: 241 PPDEVTRGLREGFSQLDRRAWLEVLDPKHRYAKHLRAYYQAWDLLDRPGSDFLSWLDTAGFELDSCPRSVLEADTVHYCSEEEREQYAIDI----EGGRVWFRGGDRRPVDTGSKGWIFVVRDGVVYAAEKRTEPPRFHHSSFFSGQCVEVAGLFVARDGWVCRVFPHSGHYRPGDTQIMHLLKFLDQRHLDLSSVEVDAQHTMKVARLLRREGN-KMKKTDCPHFMRGDALLHFLERKFSAWSTPLFNELVERRT 491
BLAST of mRNA_L-elsbetiae_contig1504.3622.1 vs. uniprot
Match: A0A067CMQ2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CMQ2_SAPPC) HSP 1 Score: 216 bits (551), Expect = 1.710e-62 Identity = 115/266 (43.23%), Postives = 158/266 (59.40%), Query Frame = 1 Query: 463 PQVLQGWKR-NCVALDKRSWLEVRDKQHRYGKNLRLYFKEWDRRGKPGGSFFKWLSTPEVQLDGCPRHELESDVVHYCRPEERDNYALSLKVTTEGQAMLYT-AGGKPVNCGPNAWLFVLRDHTIFATDK-KTDPPRFHHSSFFGGGYVEAAGMLVAEQGVLKTLFPHSGHYRPTNQHLQGLLKFLRGLGVDLSALQVDAQRVHKVARPDKRTCYPRVRKMDNPFMVSALYLLNFFEAKYLAWSSSLFDDLHRKVT----ARHERL 1239 P +++G+ N +DKRSWLEV D++HRYG NLR Y+KEW R P F++WL V++DG PR +LES+ V YC ER +AL+ + MLYT A PV G + W+FVLRD ++ ++K T PR HH+S GG V+ AGM+V G L ++PHSGHYRP+ + LL+FL G G++L + VD QR+ KV+R +R+ +V+K+DN + L+F E K W S LF DL R V RH L Sbjct: 29 PVLVKGFSTGNIAVVDKRSWLEVCDRKHRYGANLRAYYKEWKRYEGPKPGFWEWLDDESVEVDGVPRAKLESETVLYCDKAERQKFALTFR-----DGMLYTVADDAPVETGDDGWIFVLRDGVLYGSEKVTTQVPRIHHTSLSGGECVQTAGMMVVSNGTLNIIYPHSGHYRPSENEVLVLLRFLEGHGIELEDVLVDVQRIQKVSR--ERSNNVKVKKLDNAHFWNGRMALDFLELKDFVWHSDLFVDLERCVAHIELQRHHHL 287
BLAST of mRNA_L-elsbetiae_contig1504.3622.1 vs. uniprot
Match: A0A1V9YJX7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJX7_9STRA) HSP 1 Score: 212 bits (539), Expect = 6.030e-61 Identity = 109/257 (42.41%), Postives = 156/257 (60.70%), Query Frame = 1 Query: 463 PQVLQGWKRNCVAL-DKRSWLEVRDKQHRYGKNLRLYFKEWDRRGKPGGSFFKWLSTPEVQLDGCPRHELESDVVHYCRPEERDNYALSLKVTTEGQAMLYTAGGKPVNCGPNAWLFVLRDHTIFATDK-KTDPPRFHHSSFFGGGYVEAAGMLVAEQGVLKTLFPHSGHYRPTNQHLQGLLKFLRGLGVDLSALQVDAQRVHKVARPDKRTCYPRVRKMDNPFMVSALYLLNFFEAKYLAWSSSLFDDLHRKVTAR 1227 P +++G+ VA+ DKRSWLEV D++HRYG NLR Y+KEW R P F++WL ++++G PR +LES+ V YC +R +AL G ++ TA PV+ G + W+FVLRD ++ ++K T PR HH+S GG V+ AGM+V G L ++PHSGHYRP+ + LL+FL+ G+ LS + VD QR+ KV+R +RT +V+K++N + L+F E K W S LF DL R V R Sbjct: 23 PVLVKGFSSGNVAVVDKRSWLEVCDRKHRYGANLRAYYKEWKRYEGPKPGFWEWLDDETIEVEGVPRTKLESETVLYCDKTQRQKFALGF----HGGMLVTTADMAPVDTGDDGWIFVLRDGVLYGSEKVTTQVPRIHHTSLSGGECVQTAGMMVVSNGTLNIIYPHSGHYRPSENEVLVLLRFLQAHGIVLSDVLVDVQRIQKVSR--ERTNNAKVKKLENAHFWNGQQALDFLELKDFVWHSDLFADLERTVAQR 273
BLAST of mRNA_L-elsbetiae_contig1504.3622.1 vs. uniprot
Match: M4B446_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B446_HYAAE) HSP 1 Score: 208 bits (530), Expect = 1.110e-59 Identity = 118/271 (43.54%), Postives = 164/271 (60.52%), Query Frame = 1 Query: 463 PQVLQGWKR-NCVALDKRSWLEVRDKQHRYGKNLRLYFKEWDRRG----KPGGSFFKWLSTPEVQLDGCPRHELESDVVHYC-RPEERDNYALSLKVTTEGQAMLYTAGGKPVNCGPNAWLFVLRDHTIFATDKKTDP-PRFHHSSFFGGGYVEAAGMLVAEQGVLKTLFPHSGHYRPTNQHLQGLLKFLRGLGVDLSALQVDAQRVHKVARPDKRTCYPRVRKMDNPFMVSALYLLNFFEAKYLAWSSSLFDDLHR---KVTARHERLHQ 1245 P++++G+ N +DK+SWLEV D++HRYG NLR Y+KEW R+ KP SF++WL +++ G PR +LE + V YC ER +ALS+ + ++ +G + V GP+ W+FVLRD ++ K+T PR HH+SF GG V+ AGM+V GV+KT+FPHSGHYRP+ L LL+FL GVDLSA+ VD QR+ KV R VRK+DN +A + F E K+LAW LFD+L K+T H L + Sbjct: 13 PKLVKGYSAGNISVVDKKSWLEVCDRKHRYGANLRAYYKEWKRQPMEPMKP--SFWEWLDDESIEVAGVPRTKLERETVLYCDTAAERQKFALSV----QNGVIVRDSGQEIVETGPDGWIFVLRDGVLYGCQKETKKIPRIHHTSFVGGECVQTAGMMVITGGVIKTIFPHSGHYRPSEYELLVLLRFLVKNGVDLSAVDVDVQRIQKVYRESVNGTL--VRKLDNAHFWNAYRVWYFLEEKHLAWKIGLFDELVETVGKMTDTHVLLER 275
BLAST of mRNA_L-elsbetiae_contig1504.3622.1 vs. uniprot
Match: A0A1W0A215_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A215_9STRA) HSP 1 Score: 206 bits (523), Expect = 5.270e-59 Identity = 107/248 (43.15%), Postives = 150/248 (60.48%), Query Frame = 1 Query: 490 NCVALDKRSWLEVRDKQHRYGKNLRLYFKEWDRRGKPGGSFFKWLSTPEVQLDGCPRHELESDVVHYCRPEERDNYALSLKVTTEGQAMLYTAGGKP-VNCGPNAWLFVLRDHTIFATDKKTDP-PRFHHSSFFGGGYVEAAGMLVAEQGVLKTLFPHSGHYRPTNQHLQGLLKFLRGLGVDLSALQVDAQRVHKVARPDKRTCYPRVRKMDNPFMVSALYLLNFFEAKYLAWSSSLFDDLHRKVTAR 1227 N +DKRSWLEV D++HRYG NLR Y+K W R P F++WLS V+++G PR +LE + V Y ER +A+ ++ +L+ A ++ G W+FVLRD ++ + K T PR HH+SF GG V+ AG++V EQGVLK ++PHSGHYRPT + LL+FL G GV L+ ++VD QR KV+R +R ++ K N AL++LNF + K AW+ +LFDDL R Sbjct: 49 NEAIVDKRSWLEVCDQKHRYGGNLRAYYKAWKRCDDPKPEFWEWLSDESVEVEGVPRTKLEKETVVYYNKTERKQFAMDIRY-----GLLHKASTPELIDTGEEGWIFVLRDGVLYGSAKVTKQVPRIHHTSFVGGECVQTAGIMVIEQGVLKVIYPHSGHYRPTESEVLVLLRFLLGRGVRLNDVEVDVQRFQKVSR--ERDNVSKISKKANAMFWPALHVLNFLQVKEKAWAGTLFDDLEMAAKNR 289
BLAST of mRNA_L-elsbetiae_contig1504.3622.1 vs. uniprot
Match: A0A1V9Y7I8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y7I8_9STRA) HSP 1 Score: 206 bits (525), Expect = 8.020e-59 Identity = 107/258 (41.47%), Postives = 157/258 (60.85%), Query Frame = 1 Query: 463 PQVLQGWKR-NCVALDKRSWLEVRDKQHRYGKNLRLYFKEWDRRGKPGGSFFKWLSTPEVQLDGCPRHELESDVVHYCRPEERDNYALSLKVTTEGQAMLYTAGGK-PVNCGPNAWLFVLRDHTIFATDK-KTDPPRFHHSSFFGGGYVEAAGMLVAEQGVLKTLFPHSGHYRPTNQHLQGLLKFLRGLGVDLSALQVDAQRVHKVARPDKRTCYPRVRKMDNPFMVSALYLLNFFEAKYLAWSSSLFDDLHRKVTAR 1227 P +++G+ N +DKRSWLEV D++HRYG NLR Y+KEW R P F++WL V+++G PR +LES+ V YC ER +AL+ ML T+ + PV+ + W+FVLRD ++ +K T PR HH+S GG V+ AGM+V +G+L ++PHSGHYRP+ + LL+FL+ G+ L + VD QR+ KV+R +R+ +V+K++N +A L+F E K W S LF +L R+V R Sbjct: 23 PVLVKGFSSGNIAVVDKRSWLEVCDRKHRYGANLRAYYKEWKRYEGPKPGFWEWLDDESVEVEGVPRTKLESETVLYCDKAERQKFALNFL-----HGMLVTSTTQQPVDTADDGWIFVLRDGVLYGNEKVTTQVPRIHHTSLSGGECVQTAGMMVVTKGILNIIYPHSGHYRPSENEVLVLLRFLKSHGIVLENVLVDVQRIQKVSR--ERSDNVKVKKLENAHFWNAQQALDFLELKDFVWHSDLFTELERRVAQR 273 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1504.3622.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1504.3622.1 >prot_L-elsbetiae_contig1504.3622.1 ID=prot_L-elsbetiae_contig1504.3622.1|Name=mRNA_L-elsbetiae_contig1504.3622.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=500bp GEREEADSRDELIGIFVPALDPAEGGRGGARPAPLLLADRKVNDGDDYEMback to top mRNA from alignment at L-elsbetiae_contig1504:14689..23020- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1504.3622.1 ID=mRNA_L-elsbetiae_contig1504.3622.1|Name=mRNA_L-elsbetiae_contig1504.3622.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8332bp|location=Sequence derived from alignment at L-elsbetiae_contig1504:14689..23020- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1504:14689..23020- >mRNA_L-elsbetiae_contig1504.3622.1 ID=mRNA_L-elsbetiae_contig1504.3622.1|Name=mRNA_L-elsbetiae_contig1504.3622.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3000bp|location=Sequence derived from alignment at L-elsbetiae_contig1504:14689..23020- (Laminarionema elsbetiae ELsaHSoW15)back to top |