mRNA_L-elsbetiae_contig1504.3619.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1504.3619.1 vs. uniprot
Match: A0A6H5L369_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L369_9PHAE) HSP 1 Score: 523 bits (1348), Expect = 2.080e-161 Identity = 472/1011 (46.69%), Postives = 556/1011 (55.00%), Query Frame = 1
Query: 1 ELSTCRRGLPCPERPRTGNLKDDRVGL-------------GLHNFHSKGTSGPAASNKDPLSRSSLG---------ADADKPPFQPRDNDIEARDSVSTLKQPSSPVTPETNTGSVLTTEAGXXXXXXXXXXTHG-HKSPAACWRCHRELVILEGEGGDRHHPNATS--TGIAAAASWDGGGGSDGLGQTSLS-----FFGSGDDARGSGAFDSTHTAPTLLQNHDEHRAFPLSPEAETVLAEDSAFGTLGTDDPEGR---------DSRAADRCTIDTSGATRNPLSSAKKNKEKKKKPLPQGVEEEGEAVSLELSFSQLRRHDEEQDGRRPSNSRGNGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGIPHFFSGDE-------------------VPEHIIGRNRMIWAQKSAARYARRVRDSSRRREEIASPRRLKIAAAVEGEKRRKEKELERRERVRRSPSRWDRDGRRNGCPIRPSSSPAAFLSNPRNAASPPPSSSSPA-GRHRHRPATAEEPYGGRSCIRCDPRRWYRGEFLGELGGPAAGTALPARQREGGRQGPAEEEGVHVWNRAVSDRYRLQRQWAALPHDGGELWWAKPRLGGGGEAVVVKTLAAETSDERAWDTFAREWGVLKYLQEVGRLEGREPLSVGLVDAFEKERSLVLAIPAGSRTLREVGQQAHSARRKKKKTKKERTADD-LFFDQAESLAVQACRAVCWLHRCGLVHGDVTPDSFVVL--GGTGGGGDSTSS--------SPVRGWRGLAGAGAXXXXXXXXXXXXXXXXXXXXXGRAELRLMVGRSVARRSDAAGGCPRHPLLEPVSRNFPVGEPFDKAYATPERVQAALYDTQWPAEISEDAWGFGMTVHWLLTGRDDSVPGSDV------------------MFGAEKDVGSRSDGVTCIEVSDVPACPGSVCSVLPGLLAADPRRRESAL 2769
ELS CRRGLPC RPRTG + GL L + + G G +A ++ S SS G A AD+ R I+ DS+STL SS + + S LT AG T G SP CWRCHRE+ IL+ + DRHH TG A+ + +D GG D S S G D G G ++ T + D+ R P AET+LAE SAFGT+ TD D+ A R D +G P+S A +E+ EEE + LELSF +RRH+ + S + R XXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX F GDE VPE+++GR RM+WAQ+SA RYARRV D RRREEIASP + EKRR +ELER+ER+R SP RW RDGR P SSPAA + +++ P ++SSPA H+ RP+TA PYGGRSC++CDPRRWYRGEF+GELGG AG+ + EG +WN+ VSDRYRL R W P D GELWWAKPRL G G AVVVK LA D W+ F REWGVL+YLQE GR+ GREPLSVGLV AFE ERSLVL+IPAGSRTLREVGQ HS RR +KK R +D +F DQ ESLA QACRAV WLH GL+ GDVTPD+F++L GG G G STS SPVR XXXXXXXXXXX +ELRL+ GRS ARR DAAGGCPRHPLLEP FDKA+A+PER+QAAL D PAEI++DAWG G T++WLLTGR+D VPG+ V G K +R DGV P C G+VCS LP LL+ DP+RRE+AL
Sbjct: 217 ELSACRRGLPCTSRPRTGAMHTGSSGLIPQFVPLLPPTALWLRAYTATGICGGSAHAREAASASSRGQKSVAAAETAAADRHLHHDR-GQIDVGDSLSTLPPRSSVANAKEGSASALTVVAGAERDGAG---TSGLATSPTECWRCHREMAILDAD--DRHHQRVAGSYTGAASTSPYDARGGLDHNSYYSSSGADNEAAGPRGDTAGGGVTYASRTG--VAPRQDQLRRPPSPGVAETLLAEASAFGTMTTDGSPTSGGGGGGVDGDASHAPRGRADVAGR---PVSQAAVQEEE---------EEEANQI-LELSFLHVRRHNAGEGKESASENLAAARERXXXXXXXXXXXXXXXXRISGRSPNQRSQRYGVVRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRRF---------FCPGDEARTRVRCNGKTWGQFTIVEVPEYVVGRRRMLWAQRSAERYARRVSDLKRRREEIASPXXXXXXXXXDREKRRAHRELERKERIRNSPLRWGRDGR-------PCSSPAALQAT--QSSTEPSAASSPARDYHQRRPSTAG-PYGGRSCLKCDPRRWYRGEFMGELGGLGAGSPXXXXXXXXXED---DGEGGRLWNKTVSDRYRLLRPWTTSPLDEGELWWAKPRLCGSGTAVVVKVLADGKRDATGWEAFIREWGVLEYLQEEGRVSGREPLSVGLVCAFETERSLVLSIPAGSRTLREVGQHMHSERR----SKKSRISDGGVFNDQVESLATQACRAVGWLHHHGLISGDVTPDNFILLSRGGGGTGRSSTSGGCHSDKGHSPVR-------------SPSRGQGXXXXXXXXXXXXESELRLVAGRSAARRPDAAGGCPRHPLLEP----------FDKAHASPERIQAALDDVPCPAEIADDAWGLGTTIYWLLTGREDYVPGARVHSTWGGDEVNSGYESPASAHGNRKQSPTREDGV--------PTCTGTVCSALPDLLSLDPKRRETAL 1149
BLAST of mRNA_L-elsbetiae_contig1504.3619.1 vs. uniprot
Match: D8LDY0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDY0_ECTSI) HSP 1 Score: 375 bits (962), Expect = 5.060e-113 Identity = 316/708 (44.63%), Postives = 378/708 (53.39%), Query Frame = 1
Query: 1 ELSTCRRGLPCPERPRTGNLKDDRVGLGLHNFHSKGTSGPAASNKDPLSRSSLG-ADADKPPFQPRDNDIEARDSVSTLKQPSSPVTPETNTGSVLTTEAGXXXXXXXXXXTHG-HKSPAACWRCHRELVILEGEGGDRHHPNATS--TGIAAAASWDGGGGSDGLGQTSLSFFGSGDDARGSGAFDST------HTAPTLLQNHDEHRAFPLSP-EAETVLAEDSAFGTLGTD-DPEGRDSRAADRCTIDTSGATRNPLSSAKKNKEKKKKPLPQGVEEEGEAVS------LELSFSQLRRHDEEQDGRRPSNSRGNGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGIPH--FFSGDEVPEHIIGRNRMIWAQKSAARYARRVRDSSRRREEIASPRRLKIAAAVEGEKRRKEKELERRERVRRSPSRWDRDGRRNGCPIRPSSSPAAFLSNPRNAASPPPSSSSPA-GRHRHRPATAEEPYGGRSCIRCDPRRWYRGEFLGELGGPAAGTALPARQREGGRQGPAEEEGVHVWNRAVSDRYRLQRQWAALPHDGGELWWAKPRLGGGGEAVVVKTLAAETSDERAWDTFAREWGVLKYLQEVGRLEGREPLSVGLVDAFEKERSLVLAIPAGSRTLREVGQQAHSARRKKK 2061
ELS CRRGLPC RPRT G+ + H++ P+AS++ S ++ A AD+ RD I+ DS+STL SS + + S LT AG T G SP CWRCHRE+ IL+ + DRH+ TG A+ + +D GG D S + SG D +G T + + T + + P SP AET+LAE S FGTL TD P D S A+R+ A + P+ Q +E LELSF +RRH + G G XXXXXXXXXXXXXXXXXXX G F GDEVPE+++GR RM+WAQ+SA +YARRV D RRREEIASPRR K+AAA + EKRR ++ELE +ERVR SP RWDRDGR P SSPAA + +++ P S SSPA G H+ RP+TA PYGGRSC++CDPRRWYRGEF+G LGG G+ P R+ GGRQ E EG +WNR VSDRYRL R W P D ELWWAKPRL G G AVVVK LA D W+ F REWGVLKYLQE GR+ GREPLSVGLV AFE ERSLVL+IPAGSRTL+EVGQQ HS RR KK
Sbjct: 117 ELSACRRGLPCTSRPRTA------TGISGGSAHAR--EAPSASSRGQKSVAAAETAAADRHLHHDRDQ-IDVGDSLSTLPPRSSVANAKEGSVSALTVVAGAGRDGAV---TSGLATSPTECWRCHREMAILDAD--DRHNQRVAGSCTGAASTSPYDARGGLD----HSSHYSSSGADNEAAGPRGDTTGGGVAYASRTGVAPRQDQLLRPPSPGAAETLLAEASGFGTLTTDGSPTSVGGXXXXXXXXDASHASRDRADVAGR-------PVSQAALQEXXXXXXXANQLLELSFLHVRRH-----------NAGEGEESASDNLAXXXXXXXXXXXXXXXXXXXRDRISGRSPNQRSRRHAGKRGGRRRATTGAAGRRARKRNDRARGGDGAGRGASATGQQRRFFCPGDEVPEYVVGRRRMLWAQRSAEQYARRVSDLKRRREEIASPRRQKMAAAADREKRRAQRELESKERVRNSPLRWDRDGR-------PCSSPAALPA--AQSSTEPSSPSSPARGHHQRRPSTAG-PYGGRSCLKCDPRRWYRGEFMGGLGGLGTGSRPPPRR--GGRQ-EDEGEGGRLWNRIVSDRYRLLRPWTTSPLDDSELWWAKPRLSGSGTAVVVKVLADGKRDATGWEAFIREWGVLKYLQEEGRVGGREPLSVGLVCAFETERSLVLSIPAGSRTLKEVGQQMHSERRSKK 775
BLAST of mRNA_L-elsbetiae_contig1504.3619.1 vs. uniprot
Match: D8LDX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDX9_ECTSI) HSP 1 Score: 72.4 bits (176), Expect = 2.480e-9 Identity = 40/89 (44.94%), Postives = 52/89 (58.43%), Query Frame = 1
Query: 2539 ISEDAWGFGMTVHWLLTGRDDSVPGSDVMF---GAEKDV---------GSRSDGVTCIEVSDVPACPGSVCSVLPGLLAADPRRRESAL 2769
+++DAWG G T++WLLTGR+D VPG+ V G E D+ G+R T P C G+VCS LP LL+ DP RRE+AL
Sbjct: 1 MADDAWGLGTTIYWLLTGREDYVPGAQVQSTWGGDEVDIDYESPAPAHGNREQSQT--REDGAPTCAGTVCSALPDLLSLDPGRRETAL 87 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1504.3619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1504.3619.1 >prot_L-elsbetiae_contig1504.3619.1 ID=prot_L-elsbetiae_contig1504.3619.1|Name=mRNA_L-elsbetiae_contig1504.3619.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=923bp ELSTCRRGLPCPERPRTGNLKDDRVGLGLHNFHSKGTSGPAASNKDPLSRback to top mRNA from alignment at L-elsbetiae_contig1504:3..7584+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1504.3619.1 ID=mRNA_L-elsbetiae_contig1504.3619.1|Name=mRNA_L-elsbetiae_contig1504.3619.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7582bp|location=Sequence derived from alignment at L-elsbetiae_contig1504:3..7584+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1504:3..7584+ >mRNA_L-elsbetiae_contig1504.3619.1 ID=mRNA_L-elsbetiae_contig1504.3619.1|Name=mRNA_L-elsbetiae_contig1504.3619.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5538bp|location=Sequence derived from alignment at L-elsbetiae_contig1504:3..7584+ (Laminarionema elsbetiae ELsaHSoW15)back to top |