mRNA_L-elsbetiae_contig1500.3601.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1500.3601.1 vs. uniprot
Match: A0A6H5JYC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC3_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 1.840e-19 Identity = 48/138 (34.78%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 1 LGIDPKLLRDWARQDNQLIKVLEQQSSKGNSAIRSLNKGSDPATKEVEEALVDEINSLRRHGAGVTADLVLAKLLQVMPNFQGRLPGADDPDAVDKYRNRFKSWYYKFLNRHRFSARRRTSLGQKKPDGWEGKAWAFI 414 L + K + +W +Q+ QL + + ++ S + ++ G +T + E+ALVD IN R+ G V+ KLL++ P+ G +P P+ ++ +F SWY +F R+ FS RRR S+GQK P G+EG AWA + Sbjct: 40 LQVPRKRIIEWLKQEEQLREKIS--ANPELSKAKQVHSGGKASTVDAEQALVDYINKQRKQHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFGKRNGFSIRRRNSVGQKLPKGYEGMAWATV 175
BLAST of mRNA_L-elsbetiae_contig1500.3601.1 vs. uniprot
Match: A0A6H5JN68_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN68_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 2.500e-18 Identity = 48/138 (34.78%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 1 LGIDPKLLRDWARQDNQLIKVLEQQSSKGNSAIRSLNKGSDPATKEVEEALVDEINSLRRHGAGVTADLVLAKLLQVMPNFQGRLPGADDPDAVDKYRNRFKSWYYKFLNRHRFSARRRTSLGQKKPDGWEGKAWAFI 414 L + K + +W +Q+ QL + + ++ S + + G +T + E+ALVD IN R+ G V +KLL++ P+ G +P P+ ++ +F SWY +F R+ FS RRRTS+GQK P G+EG AW + Sbjct: 68 LQVPGKRIIEWLKQEEQLREKVS--ANPKLSKAKQVQSGGKASTVDTEQALVDYINEQRKQHRGCGNREVTSKLLELKPDALGGMPANTKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWTTV 203
BLAST of mRNA_L-elsbetiae_contig1500.3601.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 4.580e-18 Identity = 49/138 (35.51%), Postives = 79/138 (57.25%), Query Frame = 1 Query: 1 LGIDPKLLRDWARQDNQLIKVLEQQSSKGNSAIRSLNKGSDPATKEVEEALVDEINSLRRHGAGVTADLVLAKLLQVMPNFQGRLPGADDPDAVDKYRNRFKSWYYKFLNRHRFSARRRTSLGQKKPDGWEGKAWAFI 414 L +D + + W ++ + +++++ S +S++ G P T EVE+ L D IN RR G + V+ KLL++ P+ G L A + +R +FK+WY++F RH S RRRTS+GQK P G+EG A+A + Sbjct: 106 LAVDRRRIITWVGEEATMKNLVKEKPKL--SKAKSIHAGVAPPTAEVEQDLEDYINEQRREHRGCGSMEVMNKLLELKPDALGGLTAAASAEETLAFRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATL 241
BLAST of mRNA_L-elsbetiae_contig1500.3601.1 vs. uniprot
Match: A0A6H5JCV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV1_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 5.870e-18 Identity = 47/133 (35.34%), Postives = 76/133 (57.14%), Query Frame = 1 Query: 16 KLLRDWARQDNQLIKVLEQQSSKGNSAIRSLNKGSDPATKEVEEALVDEINSLRRHGAGVTADLVLAKLLQVMPNFQGRLPGADDPDAVDKYRNRFKSWYYKFLNRHRFSARRRTSLGQKKPDGWEGKAWAFI 414 K + +W +Q+ QL + + ++ S + ++ G +T + E+ALVD IN R+ G V+ K+L++ P+ G +P P+ ++ +F SWY +F RH S RRRTS+GQK P G+EG AWA + Sbjct: 160 KRIIEWLKQEEQLREKVS--ANPKLSKAKQVHSGGKASTVDAEQALVDYINEQRKQHRGCGNREVMNKVLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRHGSSIRRRTSVGQKLPKGYEGMAWATV 290
BLAST of mRNA_L-elsbetiae_contig1500.3601.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 8.580e-18 Identity = 48/138 (34.78%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 1 LGIDPKLLRDWARQDNQLIKVLEQQSSKGNSAIRSLNKGSDPATKEVEEALVDEINSLRRHGAGVTADLVLAKLLQVMPNFQGRLPGADDPDAVDKYRNRFKSWYYKFLNRHRFSARRRTSLGQKKPDGWEGKAWAFI 414 L + K + +W +Q+ QL + + ++ S + ++ G +T + E+ALVD IN R+ G V+ KLL++ P+ G +P P+ ++ +F SWY +F R+ FS RRR S+GQK P G+EG AWA + Sbjct: 87 LQVPRKRIIEWLKQEGQLREKVS--ANPKLSKAKQVHSGGKASTVDAEQALVDYINEQRKLHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATV 222
BLAST of mRNA_L-elsbetiae_contig1500.3601.1 vs. uniprot
Match: A0A6H5KFQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ9_9PHAE) HSP 1 Score: 87.0 bits (214), Expect = 1.190e-17 Identity = 50/138 (36.23%), Postives = 76/138 (55.07%), Query Frame = 1 Query: 1 LGIDPKLLRDWARQDNQLIKVLEQQSSKGNSAIRSLNKGSDPATKEVEEALVDEINSLRRHGAGVTADLVLAKLLQVMPNFQGRLPGADDPDAVDKYRNRFKSWYYKFLNRHRFSARRRTSLGQKKPDGWEGKAWAFI 414 L + K + +W +Q+ QL + + + K + A + + G E+ALVD IN R+ G V+ KLLQ+ P+ G +P P+ ++ +F SWY +F R+ FS RRRTS+GQK P G+EG AWA + Sbjct: 118 LQVPRKRIIEWLKQEEQLREKVSA-NPKLSKAKQVPSGGKASTVDAAEQALVDYINEQRKQHRGCGNREVINKLLQLKPDALGGMPANAKPEEALAFKIKFNSWYQQFRKRNGFSIRRRTSVGQKLPKGYEGTAWATV 254
BLAST of mRNA_L-elsbetiae_contig1500.3601.1 vs. uniprot
Match: A0A6H5KJN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN9_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 1.930e-17 Identity = 47/138 (34.06%), Postives = 76/138 (55.07%), Query Frame = 1 Query: 1 LGIDPKLLRDWARQDNQLIKVLEQQSSKGNSAIRSLNKGSDPATKEVEEALVDEINSLRRHGAGVTADLVLAKLLQVMPNFQGRLPGADDPDAVDKYRNRFKSWYYKFLNRHRFSARRRTSLGQKKPDGWEGKAWAFI 414 L + K + +W +Q+ QL + + ++ S + ++ G +T + E+ LVD IN R+ G V+ KLL++ P+ G +P P+ ++ F WY +F R+ FS RRRTS+GQK P G+EG AWA + Sbjct: 56 LQVPRKRIIEWLKQEEQLREKVS--ANPKLSKAKQVHSGGKASTVDAEQVLVDYINEQRKQHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVNFNPWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATV 191
BLAST of mRNA_L-elsbetiae_contig1500.3601.1 vs. uniprot
Match: A0A6H5KXL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXL4_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 2.030e-16 Identity = 45/120 (37.50%), Postives = 68/120 (56.67%), Query Frame = 1 Query: 43 DNQLIKVLEQQSSKGNSAIRSLNKGSDPATKEVEEALVDEINSLRRHGAGVTADLVLAKLLQVMPNFQGRLPGADDPDAVDKYRNRFKSWYYKFLNRHRFSARRRTSLGQKKPDGWEGKA 402 +N KVL+ + S + ++ G +T + E+ALVD IN R+ G V+ KLL++ P+ G +P P+ ++ +F SWY +F R+ FS RRRTS+GQK P G+EG A Sbjct: 76 NNGAAKVLQGVTDPKLSKAKQVHSGGKASTVDAEQALVDYINEQRKQHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGFEGMA 195
BLAST of mRNA_L-elsbetiae_contig1500.3601.1 vs. uniprot
Match: A0A6H5L819_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L819_9PHAE) HSP 1 Score: 84.0 bits (206), Expect = 2.340e-16 Identity = 45/133 (33.83%), Postives = 74/133 (55.64%), Query Frame = 1 Query: 16 KLLRDWARQDNQLIKVLEQQSSKGNSAIRSLNKGSDPATKEVEEALVDEINSLRRHGAGVTADLVLAKLLQVMPNFQGRLPGADDPDAVDKYRNRFKSWYYKFLNRHRFSARRRTSLGQKKPDGWEGKAWAFI 414 K + +W +Q+ QL + + ++ S + ++ G + + E+ALVD IN + G V+ KLL++ P+ G +P P+ ++ +F SWY +F R+ F RRRTS+GQK P G+EG AWA + Sbjct: 89 KRIIEWLKQEEQLREKVS--ANPKLSKAKQVHSGGKASIVDAEQALVDYINERHKQHRGCGNREVMNKLLELKPDALGGVPANAKPEEALAFKVKFNSWYQRFRKRNGFRIRRRTSVGQKLPKGYEGMAWATV 219
BLAST of mRNA_L-elsbetiae_contig1500.3601.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE) HSP 1 Score: 83.2 bits (204), Expect = 6.670e-16 Identity = 46/138 (33.33%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 1 LGIDPKLLRDWARQDNQLIKVLEQQSSKGNSAIRSLNKGSDPATKEVEEALVDEINSLRRHGAGVTADLVLAKLLQVMPNFQGRLPGADDPDAVDKYRNRFKSWYYKFLNRHRFSARRRTSLGQKKPDGWEGKAWAFI 414 L + K + +W +Q+ QL + + ++ S + ++ G +T + E+ALVD +N R+ V+ KLL++ P+ G + P+ ++ +F SWY +F R+ FS RRRTS+GQK P G+EG AWA + Sbjct: 115 LQVPWKRIIEWLKQEEQLREKVS--ANPKLSKAKQVHSGGKASTVDAEQALVDYMNEQRKQHRDCGNREVMNKLLELKPDALGGMSTNAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATV 250 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1500.3601.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1500.3601.1 >prot_L-elsbetiae_contig1500.3601.1 ID=prot_L-elsbetiae_contig1500.3601.1|Name=mRNA_L-elsbetiae_contig1500.3601.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=138bp LGIDPKLLRDWARQDNQLIKVLEQQSSKGNSAIRSLNKGSDPATKEVEEAback to top mRNA from alignment at L-elsbetiae_contig1500:1019..1432- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1500.3601.1 ID=mRNA_L-elsbetiae_contig1500.3601.1|Name=mRNA_L-elsbetiae_contig1500.3601.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=414bp|location=Sequence derived from alignment at L-elsbetiae_contig1500:1019..1432- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1500:1019..1432- >mRNA_L-elsbetiae_contig1500.3601.1 ID=mRNA_L-elsbetiae_contig1500.3601.1|Name=mRNA_L-elsbetiae_contig1500.3601.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=828bp|location=Sequence derived from alignment at L-elsbetiae_contig1500:1019..1432- (Laminarionema elsbetiae ELsaHSoW15)back to top |