mRNA_L-elsbetiae_contig14999.3580.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14999.3580.1 vs. uniprot
Match: D7G449_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G449_ECTSI) HSP 1 Score: 228 bits (581), Expect = 1.930e-74 Identity = 123/127 (96.85%), Postives = 125/127 (98.43%), Query Frame = 1 Query: 1 MPSTLSKLYDAAASGSVERTVAVLSQGSVDIDGGYGGVGRAPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSRALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAG 381 MPSTLSKLYDAAASGSVERTVAVLSQGSV+IDGGYG VGR PLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVS+ALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAG Sbjct: 1 MPSTLSKLYDAAASGSVERTVAVLSQGSVNIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAG 127
BLAST of mRNA_L-elsbetiae_contig14999.3580.1 vs. uniprot
Match: D7G2C8_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C8_ECTSI) HSP 1 Score: 222 bits (565), Expect = 5.450e-72 Identity = 122/128 (95.31%), Postives = 122/128 (95.31%), Query Frame = 1 Query: 1 MPSTLSKLYDAAASGSVERTVAVLSQGSVDIDGGYGGVGRAPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSRALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAGA 384 MPSTLSKLYDAAASGSVERTVAVLSQGSVDIDGGYG VGR PLMAASTMGYLRVVRVLLR GARVSVADNDGATALHLSIV KHLAVSRALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIH A Sbjct: 1 MPSTLSKLYDAAASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRPGARVSVADNDGATALHLSIVIKHLAVSRALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHVDA 128
BLAST of mRNA_L-elsbetiae_contig14999.3580.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE) HSP 1 Score: 224 bits (571), Expect = 2.100e-66 Identity = 122/128 (95.31%), Postives = 123/128 (96.09%), Query Frame = 1 Query: 1 MPSTLSKLYDAAASGSVERTVAVLSQGSVDIDGGYGGVGRAPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSRALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAGA 384 MPSTLSKLY A ASGSVERTVAVLSQGSVDIDGGYG VGR PLMAA TMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVS+ALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAGA Sbjct: 1 MPSTLSKLYHAPASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAAFTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAGA 128
BLAST of mRNA_L-elsbetiae_contig14999.3580.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE) HSP 1 Score: 145 bits (366), Expect = 6.580e-38 Identity = 84/116 (72.41%), Postives = 91/116 (78.45%), Query Frame = 1 Query: 37 ASGSVERTVAVLSQGSVDIDGGYGGVGRAPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSRALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAGA 384 A GSVERTVA+LS+GSVDIDG YG GR PLM ASTMGYLRV RVLLRLGA VSVADNDGATALHLS+ N+HLAVS+AL+KAGA VEAR VDG MV+LIHAGA Sbjct: 5 ARGSVERTVALLSRGSVDIDGSYGDAGRTPLMVASTMGYLRVERVLLRLGAGVSVADNDGATALHLSVFNQHLAVSKALIKAGAEVEARCVDG--------------MVVLIHAGA 106
BLAST of mRNA_L-elsbetiae_contig14999.3580.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE) HSP 1 Score: 135 bits (339), Expect = 1.620e-35 Identity = 76/89 (85.39%), Postives = 78/89 (87.64%), Query Frame = 1 Query: 136 ASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSRALVKAGAGVEAR-------GVDGTPLHVAAAKGFHKGMVMLIHAG 381 ASTMGYLRVVRVLLRLGARVS ADNDGATALHLSIVNKHLAVS+ALVKAGA +EAR GV TPLHVAAAKGFHKGMVMLIHAG Sbjct: 38 ASTMGYLRVVRVLLRLGARVSAADNDGATALHLSIVNKHLAVSKALVKAGADLEARIDHHQALGVGCTPLHVAAAKGFHKGMVMLIHAG 126
BLAST of mRNA_L-elsbetiae_contig14999.3580.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE) HSP 1 Score: 113 bits (282), Expect = 3.960e-27 Identity = 76/139 (54.68%), Postives = 96/139 (69.06%), Query Frame = 1 Query: 1 MPSTLSK-LYDAAASGSVERTVAVLSQGSVDIDGGYGGVGRAPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSRALVKAGAGVEARG---------VDG-TPLHVAAAKGFHKGMVMLIHAGA 384 +PST S LY AA+SGSVERT+ +LS G +ID G LM A+ GYLR+VRVLLR GA VSV+ +DG TALH +I ++LAV++AL+KAGA VEA+ V G TPLH+AA +GF +GMV LI+AGA Sbjct: 13 VPSTTSDTLYCAASSGSVERTLDLLSGGFTEIDRRCDEHGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHTALHFAIGGRNLAVTKALIKAGAEVEAKADLVRMESEVVQGQTPLHLAAGEGFCEGMVALINAGA 151
BLAST of mRNA_L-elsbetiae_contig14999.3580.1 vs. uniprot
Match: D8LP44_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP44_ECTSI) HSP 1 Score: 73.6 bits (179), Expect = 9.630e-13 Identity = 58/138 (42.03%), Postives = 70/138 (50.72%), Query Frame = 1 Query: 1 MPSTLSKLYDAAASGSVERTVAVLSQGSVDIDGGYGGVGRAPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSRALVKAGAGVEARG---------VDG-TPLHVAAAKGFHKGMVMLIHAGA 384 MPST S LY+AA +GSVERT+ +LS G +ID G LM A+ GYLR+VRVLLR GA VSV+ +DG + V G TPLH+A +GF GMV LI AGA Sbjct: 1 MPSTTSTLYNAAWTGSVERTLDLLSDGFTEIDRRCEENGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHXXXXXXXXXXXXXXXXXXXXXXXXXXXKADFLHPDQEVVQGQTPLHLATGEGFCDGMVALIDAGA 138
BLAST of mRNA_L-elsbetiae_contig14999.3580.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 60.5 bits (145), Expect = 3.930e-8 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 1 Query: 13 LSKLYDAAASGSVERTVAVLSQGSVDIDGGYGGVGRAPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLS 237 ++KL++AA GS T A+LS GS+DIDGG G PLM A + VV +LL GA VS +++G TALHLS Sbjct: 15 INKLHEAARDGSTWLTAAILSTGSIDIDGGDSS-GGTPLMHAICNDHPSVVSILLSKGASVSAINDEGNTALHLS 88 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14999.3580.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14999.3580.1 >prot_L-elsbetiae_contig14999.3580.1 ID=prot_L-elsbetiae_contig14999.3580.1|Name=mRNA_L-elsbetiae_contig14999.3580.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=128bp MPSTLSKLYDAAASGSVERTVAVLSQGSVDIDGGYGGVGRAPLMAASTMGback to top mRNA from alignment at L-elsbetiae_contig14999:10..393- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14999.3580.1 ID=mRNA_L-elsbetiae_contig14999.3580.1|Name=mRNA_L-elsbetiae_contig14999.3580.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=384bp|location=Sequence derived from alignment at L-elsbetiae_contig14999:10..393- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14999:10..393- >mRNA_L-elsbetiae_contig14999.3580.1 ID=mRNA_L-elsbetiae_contig14999.3580.1|Name=mRNA_L-elsbetiae_contig14999.3580.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=768bp|location=Sequence derived from alignment at L-elsbetiae_contig14999:10..393- (Laminarionema elsbetiae ELsaHSoW15)back to top |