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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-27_005810.1 |
| Exons | 1 |
| Model size | 2024 |
| Cds size | 1059 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815604.2210858-UTR-L-elsbetiae_contig14959:1106..1193 | 1622815604.2210858-UTR-L-elsbetiae_contig14959:1106..1193 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig14959 1107..1193 + |
| 1691682985.8468282-UTR-L-elsbetiae_contig14959:1106..1193 | 1691682985.8468282-UTR-L-elsbetiae_contig14959:1106..1193 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig14959 1107..1193 + |
| 1622815604.2470253-UTR-L-elsbetiae_contig14959:2252..3130 | 1622815604.2470253-UTR-L-elsbetiae_contig14959:2252..3130 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig14959 2253..3130 + |
| 1691682985.8637924-UTR-L-elsbetiae_contig14959:2252..3130 | 1691682985.8637924-UTR-L-elsbetiae_contig14959:2252..3130 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig14959 2253..3130 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815604.235188-CDS-L-elsbetiae_contig14959:1193..2252 | 1622815604.235188-CDS-L-elsbetiae_contig14959:1193..2252 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14959 1194..2252 + |
| 1691682985.8556647-CDS-L-elsbetiae_contig14959:1193..2252 | 1691682985.8556647-CDS-L-elsbetiae_contig14959:1193..2252 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14959 1194..2252 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14959.3560.1 >prot_L-elsbetiae_contig14959.3560.1 ID=prot_L-elsbetiae_contig14959.3560.1|Name=mRNA_L-elsbetiae_contig14959.3560.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=353bp
MDRLCTLNMSYLFPLALYVCPPLAPRRLQRRSISPNVEKPLVHRVREGLL
TDADVNGNRASCTTSPSPPSGTGKNDGNDNDRVLDSQGEDSGEATSDNGF
RGGGGSVGESGHHQSASDSSSERSSFWDGDDDSEAGRVMAEISSLCQSID
SDSAAEDLPPLPAPRDTCGLLPSSDKQQHPHQYHLPLQQQQQQPYLQRPL
EFDDGGLGLNIPPLAPTAATCPCPGWAQPPSPSPPLGKLFSSHANSGSFL
AAASQVEKCSASTGPPSLPEMESVSCSPTEPLQTAASKADEESAWQGRAL
FEELLFGGMNGPQSFRFHGEEGGGATERMFGFNPLDDDLVFAAGGGQVKL
PQ* back to topmRNA from alignment at L-elsbetiae_contig14959:1107..3130+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig14959.3560.1 ID=mRNA_L-elsbetiae_contig14959.3560.1|Name=mRNA_L-elsbetiae_contig14959.3560.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2024bp|location=Sequence derived from alignment at L-elsbetiae_contig14959:1107..3130+ (Laminarionema elsbetiae ELsaHSoW15)
AAAATTGCCACGTAAAAGGAATTCCGAAACGTACGCACGAGTACAAGACT
ACCATACATAGCAGCGACTGCGGTCTTCATCCCAGCAATGGATCGGTTAT
GCACGCTGAACATGTCTTATCTCTTTCCCCTTGCTTTGTACGTATGTCCC
CCCCTTGCGCCGCGTCGTCTGCAACGCCGTTCCATCTCACCAAACGTTGA
AAAACCTCTTGTACACAGGGTTCGCGAGGGGCTGTTGACGGATGCGGACG
TGAACGGGAACAGGGCCTCTTGTACGACGTCACCTTCTCCGCCCTCGGGC
ACCGGCAAGAACGACGGCAACGACAACGACCGTGTCTTGGACAGCCAGGG
CGAGGACAGCGGCGAAGCTACCTCGGACAACGGCTTCCGCGGCGGCGGCG
GCAGCGTCGGCGAGAGCGGCCACCACCAGTCTGCCAGCGACAGCAGCAGT
GAGCGCAGCAGCTTCTGGGACGGCGACGACGACAGCGAGGCGGGAAGAGT
CATGGCAGAGATCTCGTCCTTGTGCCAAAGCATCGACTCAGACTCGGCGG
CGGAGGATCTGCCGCCCCTGCCCGCGCCGCGAGACACATGTGGCTTGCTG
CCGTCTTCGGACAAACAGCAGCACCCTCACCAGTACCACCTCCCGCTGCA
GCAGCAGCAGCAGCAGCCGTATCTGCAGCGCCCGCTGGAGTTCGACGACG
GCGGGCTTGGGCTCAACATCCCACCCCTAGCCCCGACGGCCGCCACCTGT
CCCTGCCCGGGGTGGGCGCAGCCGCCGTCGCCGTCGCCGCCGCTCGGGAA
GCTCTTCTCCTCCCACGCAAACTCGGGCAGCTTCCTGGCGGCGGCAAGTC
AGGTGGAGAAGTGTTCGGCCTCCACGGGGCCCCCGTCGTTGCCGGAGATG
GAGAGTGTGTCCTGCTCCCCCACGGAGCCGCTCCAGACCGCGGCCTCGAA
GGCTGACGAGGAGAGCGCGTGGCAAGGGCGGGCGCTCTTCGAGGAGCTGC
TGTTCGGCGGCATGAACGGCCCGCAGTCGTTCCGGTTCCATGGCGAGGAG
GGCGGCGGCGCTACCGAGAGGATGTTTGGCTTCAACCCCCTCGACGACGA
CCTGGTGTTTGCCGCTGGCGGCGGCCAGGTGAAGCTGCCGCAGTGACAAG
TGGGTGGTGTGGACTGACTGACTGACACCAAAGCTACTCTAAATGAATGT
AGTTTTTCCCGCGCACTTCTTCACTGTATACATTTTCACCCCACGGCGCT
TGGAAGCGGCTGGTTGGCTTTGTGTGCACTTGGCAAGACTTGGTTGCCGC
ATGAAATTTTTCGGGGGTATTTGGGGTGTACAGTGACTTTCAAGAACATG
GGGACTGGTGTCCTAGGGTGGAGTTTTTTTTTGCGGCGTTGATGCTGGTC
GCTTCGAAACGAGGAGTGCACAACGCGAGGGGGGGGGCGGTCGCCGTTGC
AGGGATTGTTGTGGATGTTTGGCACAGTTTTGGGTAATCGGGAGGGGGAG
CGTCCACACCGCTGCATCTTCAGTGCAACTGTTTGGATCCGACCTGCCTT
TGGCCTTCGCGCGATCGATTGGCAGATCAATCACTTGTCTCTGTGAACTT
GCTGCGCTACACAGCTACATCATTGTAGCAAGCAGTGTGTTTGGAGAACA
GCAGGGTTTTGTATGTATGGGTGAGCGCGGAACGGTACACGTTCCTGTCT
AGGCATGCTGTTTGCACGCGCGCACCACCCGCTTGCCCCCTTGATTTCGC
GTGGATGCGTCCACCCAGCTCCAGGATGTTTTCTGTGGGGTACAAGAAGT
CGCTATCATGAGGGGGGGAACGCAGATTCGCTTTACTCCGGGTTTTAGGG
GGCTCCGGCGGTAGCGATGGGACAGGCGCGTGTGTAGCTGGATGTACAGC
AGCGCTACACGCGACATCACATTACGTAGCATTTTTGTAGTTTTTTATTT
ATTTTTTCCATTTGCGACGATTCCAATTTTGCAACAAATAGACAGGGGCG
ACGTTCGTGGAAGAATGGGACGGG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig14959:1107..3130+ >mRNA_L-elsbetiae_contig14959.3560.1 ID=mRNA_L-elsbetiae_contig14959.3560.1|Name=mRNA_L-elsbetiae_contig14959.3560.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2118bp|location=Sequence derived from alignment at L-elsbetiae_contig14959:1107..3130+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGATCGGTTATGCACGCTGAACATGTCTTATCTCTTTCCCCTTGCTTT
GTACGTATGTCCCCCCCTTGCGCCGCGTCGTCTGCAACGCCGTTCCATCT
CACCAAACGTTGAAAAACCTCTTGTACACAGGGTTCGCGAGGGGCTGTTG
ACGGATGCGGACGTGAACGGGAACAGGGCCTCTTGTACGACGTCACCTTC
TCCGCCCTCGGGCACCGGCAAGAACGACGGCAACGACAACGACCGTGTCT
TGGACAGCCAGGGCGAGGACAGCGGCGAAGCTACCTCGGACAACGGCTTC
CGCGGCGGCGGCGGCAGCGTCGGCGAGAGCGGCCACCACCAGTCTGCCAG
CGACAGCAGCAGTGAGCGCAGCAGCTTCTGGGACGGCGACGACGACAGCG
AGGCGGGAAGAGTCATGGCAGAGATCTCGTCCTTGTGCCAAAGCATCGAC
TCAGACTCGGCGGCGGAGGATCTGCCGCCCCTGCCCGCGCCGCGAGACAC
ATGTGGCTTGCTGCCGTCTTCGGACAAACAGCAGCACCCTCACCAGTACC
ACCTCCCGCTGCAGCAGCAGCAGCAGCAGCCGTATCTGCAGCGCCCGCTG
GAGTTCGACGACGGCGGGCTTGGGCTCAACATCCCACCCCTAGCCCCGAC
GGCCGCCACCTGTCCCTGCCCGGGGTGGGCGCAGCCGCCGTCGCCGTCGC
CGCCGCTCGGGAAGCTCTTCTCCTCCCACGCAAACTCGGGCAGCTTCCTG
GCGGCGGCAAGTCAGGTGGAGAAGTGTTCGGCCTCCACGGGGCCCCCGTC
GTTGCCGGAGATGGAGAGTGTGTCCTGCTCCCCCACGGAGCCGCTCCAGA
CCGCGGCCTCGAAGGCTGACGAGGAGAGCGCGTGGCAAGGGCGGGCGCTC
TTCGAGGAGCTGCTGTTCGGCGGCATGAACGGCCCGCAGTCGTTCCGGTT
CCATGGCGAGGAGGGCGGCGGCGCTACCGAGAGGATGTTTGGCTTCAACC
CCCTCGACGACGACCTGGTGTTTGCCGCTGGCGGCGGCCAGGTGAAGCTG
CCGCAGTGAATGGATCGGTTATGCACGCTGAACATGTCTTATCTCTTTCC
CCTTGCTTTGTACGTATGTCCCCCCCTTGCGCCGCGTCGTCTGCAACGCC
GTTCCATCTCACCAAACGTTGAAAAACCTCTTGTACACAGGGTTCGCGAG
GGGCTGTTGACGGATGCGGACGTGAACGGGAACAGGGCCTCTTGTACGAC
GTCACCTTCTCCGCCCTCGGGCACCGGCAAGAACGACGGCAACGACAACG
ACCGTGTCTTGGACAGCCAGGGCGAGGACAGCGGCGAAGCTACCTCGGAC
AACGGCTTCCGCGGCGGCGGCGGCAGCGTCGGCGAGAGCGGCCACCACCA
GTCTGCCAGCGACAGCAGCAGTGAGCGCAGCAGCTTCTGGGACGGCGACG
ACGACAGCGAGGCGGGAAGAGTCATGGCAGAGATCTCGTCCTTGTGCCAA
AGCATCGACTCAGACTCGGCGGCGGAGGATCTGCCGCCCCTGCCCGCGCC
GCGAGACACATGTGGCTTGCTGCCGTCTTCGGACAAACAGCAGCACCCTC
ACCAGTACCACCTCCCGCTGCAGCAGCAGCAGCAGCAGCCGTATCTGCAG
CGCCCGCTGGAGTTCGACGACGGCGGGCTTGGGCTCAACATCCCACCCCT
AGCCCCGACGGCCGCCACCTGTCCCTGCCCGGGGTGGGCGCAGCCGCCGT
CGCCGTCGCCGCCGCTCGGGAAGCTCTTCTCCTCCCACGCAAACTCGGGC
AGCTTCCTGGCGGCGGCAAGTCAGGTGGAGAAGTGTTCGGCCTCCACGGG
GCCCCCGTCGTTGCCGGAGATGGAGAGTGTGTCCTGCTCCCCCACGGAGC
CGCTCCAGACCGCGGCCTCGAAGGCTGACGAGGAGAGCGCGTGGCAAGGG
CGGGCGCTCTTCGAGGAGCTGCTGTTCGGCGGCATGAACGGCCCGCAGTC
GTTCCGGTTCCATGGCGAGGAGGGCGGCGGCGCTACCGAGAGGATGTTTG
GCTTCAACCCCCTCGACGACGACCTGGTGTTTGCCGCTGGCGGCGGCCAG
GTGAAGCTGCCGCAGTGA back to top
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