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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 556 |
| Cds size | 543 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815599.9993727-CDS-L-elsbetiae_contig14869:343..730 | 1622815599.9993727-CDS-L-elsbetiae_contig14869:343..730 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14869 344..730 - |
| 1691682983.2798092-CDS-L-elsbetiae_contig14869:343..730 | 1691682983.2798092-CDS-L-elsbetiae_contig14869:343..730 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14869 344..730 - |
| 1622815600.0133953-CDS-L-elsbetiae_contig14869:1813..1906 | 1622815600.0133953-CDS-L-elsbetiae_contig14869:1813..1906 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14869 1814..1906 - |
| 1691682983.2888775-CDS-L-elsbetiae_contig14869:1813..1906 | 1691682983.2888775-CDS-L-elsbetiae_contig14869:1813..1906 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14869 1814..1906 - |
| 1622815600.028005-CDS-L-elsbetiae_contig14869:3670..3733 | 1622815600.028005-CDS-L-elsbetiae_contig14869:3670..3733 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14869 3671..3733 - |
| 1691682983.2976434-CDS-L-elsbetiae_contig14869:3670..3733 | 1691682983.2976434-CDS-L-elsbetiae_contig14869:3670..3733 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14869 3671..3733 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815600.0404408-UTR-L-elsbetiae_contig14869:3733..3745 | 1622815600.0404408-UTR-L-elsbetiae_contig14869:3733..3745 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig14869 3734..3745 - |
| 1691682983.3073158-UTR-L-elsbetiae_contig14869:3733..3745 | 1691682983.3073158-UTR-L-elsbetiae_contig14869:3733..3745 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig14869 3734..3745 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14869.3515.1 >prot_L-elsbetiae_contig14869.3515.1 ID=prot_L-elsbetiae_contig14869.3515.1|Name=mRNA_L-elsbetiae_contig14869.3515.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=181bp
MFDKDVEALAATAQPKLDVPNLLATGAAEGSGFPVAGLMMKAFKGFAGGK
KEGGASPKASTKKKEKKKTDHEGRGSRKSRRWSRKTAKRRGGGKRKATAA
ASGDDGKRDGSENRGGTAGEKHPHGVEKRGIEVDGRDGAAPLVVDDSGSS
GGGSGGDGGSGGGGTPQSEAGNSAAEGREAG back to topmRNA from alignment at L-elsbetiae_contig14869:344..3745- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig14869.3515.1 ID=mRNA_L-elsbetiae_contig14869.3515.1|Name=mRNA_L-elsbetiae_contig14869.3515.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3402bp|location=Sequence derived from alignment at L-elsbetiae_contig14869:344..3745- (Laminarionema elsbetiae ELsaHSoW15)
AGGTTAAACGACATGTTCGACAAGGACGTGGAAGCCCTCGCCGCGACGGC
ACAGCCCAAGCTCGACGTGCCCAACGTGAGTTAATCCCGGCACCTCAAGC
AAATATCTCCTGTCTAAAGGCCTTCCTGCAATGGATGGAGCCCCCAATTC
TCGAAGAGAGCTGTGCTGGGGGCAGCCGGGGCGGGGGGGGGGGGGGATTT
ATCTAGGAAATAGAGTGAAAAATCCCCCACAGACACTTTTTTTCAGAGAG
GGGGCCCTGCTGCAGTTAGCCAATATAGGAAATACTAGGGCAGGGGTTCC
GTAACCCAGCTCTAACGCTAACCCTAACCCCAAACCGACCCCCCGTTAGC
CGTTCCCAAACTTTTGTCCCATATGGTTTCTTCCAGTAGTAGCCAAACCT
GCGAAGAAGGCTTCTGAGCTTGGCAAGCCGTCTTTTTTTTTTTTTTTTTT
AGTATGTATGTATGTATGTATATGTATGTTGTCTTCACAGTAAAAATCGT
TCCGATCTCTCCATCCAGTACTTCTCAATGTCCGTACTAACCCAACACTT
GATGGGGTCAATTCCCGTGGTCACAGGCTAACTTAATACCCAAGAAAAGG
TACACGAAAAATAAAATGGACCCGAAGGTCCATGAGCCAACCAACCATGT
AATTCACCGCACAGAATCAAATAGAATACATGCAGCTATTTATAGCTGCG
TGGGCGTGTGTCGCGGTCTTGCTAGCCACATCGTGTATGTACCTGCACAG
CACAAAGCCGTTTTCGGCTTTCAGTGCAACGGTGCTCCTCGACGTTATCC
GGGGTGTCTGGTAATTCGGGGTGTCCGGTAATTGGATTTAGTTAAAGGTG
GCGCACCGGCACCTCGTGATTTTTTTTTATGTAACTTTTTACATCTATTG
CCAGGGCTATAGATAAGAGGCTGCTTGCCACGAAGAACATTCGTTTTGCC
AGAGTACTGACCCGTGATCGCACAGAAGGGGTTCCTCTCCCTGAGTCCCC
CACACCCCCCCACCTTTTGCGGTTGCTTGCCTGAGATTTTTTATCGCGAG
AAGGGCCCAGCCATCCCTTTCCCTCGTCCACGGTGAGGTCGTGATGCTTT
TATATATGTAAAACACCAAACCAGTTGCAACAAGTACTGTTTTGGCGGCT
GGGGGGGCTGTAGACGCGCACGCTGCTTGGGTTTTGAGAAAAAGACGTTT
TCCACGAGGGTCCCCAAAAAAAGCTCCCCAAGAGATTAGAGAGTTCCTCC
CCCACCCTCCTCTCAACGACGGCTCCCCTCTTTCGAATAACTCGACTGAG
CATGCAGTGGACGGACGGTCCCCCCTTGCAGCAAGGAGAGTGCCAGTCCA
GTGCCGGAAGGGGGTGGGTGGCGTTGGAAAGACGCAGTCGCGTACCGTCC
GAAAATGTTTCATTTGGTGCTGGCACCCTCTTCGTCTCTTCGTTACGGAG
TAATCGAGCTTTGAAAAACTGTCCAGGGGTGGTGGGGGGTGGTATCTTGT
GACATCTACGGTAAGCTGACTCGCGACCGGGCGTCGCCCATCTCAGACGA
AGCCATTGTGTCTGGTCCCTCTGTGGTTGTCTTCCCTTGCTTCTCTACCC
ATGGCCTCAGTCAGATTCCCGCGTCATTTTTTTCTCTCTCAGAAAAAAAA
AAAAAATGCAAACAGTATATTTTCTTCTCATGAACTAATTTAGTATGCAA
AACATATTTCAGTTTTCCCCTTGTTGCCTCCATCCTGAAAGCACACACTT
TTTCGTTCTGTTTATTTTATGTAGGTACACACTTTTCTGTGTGGCTCAAT
TTCCCCTTGTTCTCTCCACTCTTGAAACACACAACACAGCTCTTGGCGAC
GGGAGCCGCGGAGGGCTCTGGCTTCCCCGTGGCCGGCCTGATGATGAAGG
CCTTCAAGGGGTTTGCCGGCGGCAAGAAGGAGGTGATACTGGCGCGGACG
ACCGGCTCTCTTTGCATCACGTCGGGTTGCTTGACCCGGGCATTGGTGGT
GATGGTTGTCGACGACTTGTTCCTGCTGCTTGCCGCCGCCGCCGTCGCCG
CCGCCGCAACTGCTGGCTGTTTTTTTGTTAATCTTCACGTTCATTTCCAG
TGCTTGACGGGGAGCTCCTCGCCACGAGGGCATCTTGCCAGGGTACTGAA
CCGTGGTCACACAGAAGGGTTCCTTCTCCCCCGAGGCCGGCCCCCAATCG
CCCCTTCTGCGGGGCTTGCCTAATAGATGGCCCAGGGTGTGTGGGTTACC
CTAGGCTGCTTCCTTAGTTTGCCCCTTCTGCGGGGCTTGCCTAAGATGTT
TTGTCGCGAGAAGGGTTCAGCCGCCCCTTTCCCTCGTCGACGGCGAGGTC
GAAGTCTGTGTACACACGCTACATACATAAGCGCTAGCCACCGACAGGGA
CGGAAGCGAGAGAAAAAAACTCTTTTCGCAAGAAAAAGTCGCTTCCGCCG
GGTTTCGAACCCATGACCTGCCTGCTAGTTGGTGTTCGGGGGTGCCGATT
GTTTAGACCCCCGGGGCGGCCGGCAGGGGGTAATGAATTACTCCGGTGTC
GCCGGCAGCCGGCAGCGTTTCTCTCCTTGAATGCCCTGGCCGGTAGAAGG
ACAAGCTCGGAATGATCTTCTCTTTTATTTGTTTCTCTTCGTCGTGCGGA
AGACCTGTTTGTGATCCAAGGCCGTGTCTGCGCAAGAACCACCGATCTGT
TTTTGGTGACGTCACTTTTTTGCGGGCACCTTGGCTTGGTCGGGGGGGGG
GGGGGGGGGGGGCCGGGTAGAAAACATTGTGTTTGGGGGGGGGGGGGACC
CACCCCCAGGGGTTTTTGTGGGGTGGTGTGGTGGGTGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGCTACGTAT
GAATCACTGTGTTGTAGGGACGTAGGTAACCGAACTCACGGGTTATTCGC
TGCGTGTGTGTGTGTGTGTGTATGTGTGTGTCAAATGTCGAACTGCTTAC
TACTCTCACGGGCAGGGCGGTGCCTCCCCCAAAGCTAGCACGAAGAAGAA
GGAGAAGAAGAAGACGGACCACGAGGGGAGAGGGTCGAGAAAGAGCAGGC
GCTGGAGCAGGAAGACAGCGAAGCGGCGAGGCGGAGGCAAGAGGAAGGCG
ACGGCGGCGGCCTCGGGAGACGACGGCAAGCGCGACGGCTCCGAGAACCG
CGGCGGCACCGCGGGCGAGAAGCACCCGCACGGGGTCGAGAAACGCGGCA
TCGAAGTCGACGGCCGTGACGGGGCCGCTCCTCTTGTGGTAGACGACAGC
GGCAGCAGCGGTGGCGGCAGCGGCGGCGATGGCGGCAGCGGCGGCGGCGG
CACCCCCCAGAGTGAGGCTGGAAACTCGGCTGCGGAAGGGCGGGAGGCTG
GC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig14869:344..3745- >mRNA_L-elsbetiae_contig14869.3515.1 ID=mRNA_L-elsbetiae_contig14869.3515.1|Name=mRNA_L-elsbetiae_contig14869.3515.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1086bp|location=Sequence derived from alignment at L-elsbetiae_contig14869:344..3745- (Laminarionema elsbetiae ELsaHSoW15)
ATGTTCGACAAGGACGTGGAAGCCCTCGCCGCGACGGCACAGCCCAAGCT
CGACGTGCCCAACATGTTCGACAAGGACGTGGAAGCCCTCGCCGCGACGG
CACAGCCCAAGCTCGACGTGCCCAACCTCTTGGCGACGGGAGCCGCGGAG
GGCTCTGGCTTCCCCGTGGCCGGCCTGATGATGAAGGCCTTCAAGGGGTT
TGCCGGCGGCAAGAAGGAGCTCTTGGCGACGGGAGCCGCGGAGGGCTCTG
GCTTCCCCGTGGCCGGCCTGATGATGAAGGCCTTCAAGGGGTTTGCCGGC
GGCAAGAAGGAGGGCGGTGCCTCCCCCAAAGCTAGCACGAAGAAGAAGGA
GAAGAAGAAGACGGACCACGAGGGGAGAGGGTCGAGAAAGAGCAGGCGCT
GGAGCAGGAAGACAGCGAAGCGGCGAGGCGGAGGCAAGAGGAAGGCGACG
GCGGCGGCCTCGGGAGACGACGGCAAGCGCGACGGCTCCGAGAACCGCGG
CGGCACCGCGGGCGAGAAGCACCCGCACGGGGTCGAGAAACGCGGCATCG
AAGTCGACGGCCGTGACGGGGCCGCTCCTCTTGTGGTAGACGACAGCGGC
AGCAGCGGTGGCGGCAGCGGCGGCGATGGCGGCAGCGGCGGCGGCGGCAC
CCCCCAGAGTGAGGCTGGAAACTCGGCTGCGGAAGGGCGGGAGGCTGGCG
GCGGTGCCTCCCCCAAAGCTAGCACGAAGAAGAAGGAGAAGAAGAAGACG
GACCACGAGGGGAGAGGGTCGAGAAAGAGCAGGCGCTGGAGCAGGAAGAC
AGCGAAGCGGCGAGGCGGAGGCAAGAGGAAGGCGACGGCGGCGGCCTCGG
GAGACGACGGCAAGCGCGACGGCTCCGAGAACCGCGGCGGCACCGCGGGC
GAGAAGCACCCGCACGGGGTCGAGAAACGCGGCATCGAAGTCGACGGCCG
TGACGGGGCCGCTCCTCTTGTGGTAGACGACAGCGGCAGCAGCGGTGGCG
GCAGCGGCGGCGATGGCGGCAGCGGCGGCGGCGGCACCCCCCAGAGTGAG
GCTGGAAACTCGGCTGCGGAAGGGCGGGAGGCTGGC back to top
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